data_0MW
#
_chem_comp.id 0MW
_chem_comp.name "[2-(hexylamino)ethane-1,1-diyl]bis(phosphonic acid)"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C8 H21 N O6 P2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-03-08
_chem_comp.pdbx_modified_date 2013-01-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 289.203
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 0MW
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4E1E
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0MW O1 O1 O 0 1 N N N N N N -14.631 -14.468 -21.080 2.090 -2.696 0.765 O1 0MW 1
0MW P1 P1 P 0 1 N N N N N N -13.419 -14.725 -20.212 2.243 -1.490 -0.079 P1 0MW 2
0MW O2 O2 O 0 1 N N N N N N -13.593 -14.289 -18.776 3.700 -1.493 -0.762 O2 0MW 3
0MW O3 O3 O 0 1 N N N N N N -12.135 -14.248 -20.848 1.112 -1.490 -1.225 O3 0MW 4
0MW C9 C9 C 0 1 N N N N N N -13.318 -16.537 -20.218 2.060 0.002 0.954 C9 0MW 5
0MW P2 P2 P 0 1 N N N N N N -14.305 -17.160 -18.817 2.247 1.487 -0.086 P2 0MW 6
0MW O5 O5 O 0 1 N N N N N N -13.954 -16.340 -17.619 1.117 1.486 -1.232 O5 0MW 7
0MW O4 O4 O 0 1 N N N N N N -15.696 -16.905 -19.332 2.099 2.698 0.752 O4 0MW 8
0MW O6 O6 O 0 1 N N N N N N -13.943 -18.609 -18.622 3.705 1.483 -0.770 O6 0MW 9
0MW C8 C8 C 0 1 N N N N N N -11.862 -17.001 -20.222 0.674 0.006 1.604 C8 0MW 10
0MW N1 N1 N 0 1 N N N N N N -11.703 -18.457 -20.046 -0.357 0.005 0.558 N1 0MW 11
0MW C7 C7 C 0 1 N N N N N N -11.556 -19.138 -21.342 -1.703 0.008 1.146 C7 0MW 12
0MW C6 C6 C 0 1 N N N N N N -12.334 -20.448 -21.284 -2.748 0.007 0.028 C6 0MW 13
0MW C5 C5 C 0 1 N N N N N N -11.688 -21.540 -22.130 -4.150 0.011 0.641 C5 0MW 14
0MW C4 C4 C 0 1 N N N N N N -12.430 -21.614 -23.454 -5.195 0.010 -0.477 C4 0MW 15
0MW C3 C3 C 0 1 N N N N N N -12.387 -23.003 -24.076 -6.597 0.014 0.136 C3 0MW 16
0MW C2 C2 C 0 1 N N N N N N -13.272 -23.031 -25.302 -7.642 0.012 -0.982 C2 0MW 17
0MW H1 H1 H 0 1 N N N N N N -14.459 -13.917 -18.660 3.870 -0.730 -1.331 H1 0MW 18
0MW H2 H2 H 0 1 N N N N N N -12.325 -13.865 -21.696 1.149 -2.257 -1.813 H2 0MW 19
0MW H3 H3 H 0 1 N N N N N N -13.823 -16.878 -21.134 2.825 0.002 1.730 H3 0MW 20
0MW H4 H4 H 0 1 N N N N N N -14.690 -15.787 -17.387 1.154 0.720 -1.821 H4 0MW 21
0MW H5 H5 H 0 1 N N N N N N -14.681 -19.156 -18.865 3.875 2.247 -1.339 H5 0MW 22
0MW H6 H6 H 0 1 N N N N N N -11.409 -16.716 -21.183 0.562 -0.883 2.225 H6 0MW 23
0MW H7 H7 H 0 1 N N N N N N -11.333 -16.492 -19.402 0.565 0.897 2.221 H7 0MW 24
0MW H8 H8 H 0 1 N N N N N N -12.509 -18.819 -19.577 -0.237 -0.778 -0.067 H8 0MW 25
0MW H10 H10 H 0 1 N N N N N N -10.493 -19.345 -21.535 -1.832 -0.880 1.764 H10 0MW 26
0MW H11 H11 H 0 1 N N N N N N -11.958 -18.502 -22.144 -1.829 0.900 1.760 H11 0MW 27
0MW H12 H12 H 0 1 N N N N N N -13.355 -20.270 -21.654 -2.619 0.895 -0.590 H12 0MW 28
0MW H13 H13 H 0 1 N N N N N N -12.377 -20.788 -20.239 -2.622 -0.885 -0.586 H13 0MW 29
0MW H14 H14 H 0 1 N N N N N N -11.759 -22.506 -21.609 -4.279 -0.877 1.259 H14 0MW 30
0MW H15 H15 H 0 1 N N N N N N -10.630 -21.296 -22.309 -4.276 0.903 1.255 H15 0MW 31
0MW H16 H16 H 0 1 N N N N N N -11.971 -20.901 -24.155 -5.066 0.898 -1.095 H16 0MW 32
0MW H17 H17 H 0 1 N N N N N N -13.481 -21.337 -23.284 -5.069 -0.882 -1.091 H17 0MW 33
0MW H18 H18 H 0 1 N N N N N N -12.747 -23.743 -23.346 -6.726 -0.875 0.754 H18 0MW 34
0MW H19 H19 H 0 1 N N N N N N -11.353 -23.245 -24.364 -6.723 0.905 0.750 H19 0MW 35
0MW H20 H20 H 0 1 N N N N N N -13.243 -24.034 -25.753 -7.513 0.901 -1.601 H20 0MW 36
0MW H21 H21 H 0 1 N N N N N N -14.306 -22.789 -25.014 -7.516 -0.879 -1.596 H21 0MW 37
0MW H22 H22 H 0 1 N N N N N N -12.912 -22.290 -26.031 -8.641 0.015 -0.546 H22 0MW 38
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0MW C2 C3 SING N N 1
0MW C3 C4 SING N N 2
0MW C4 C5 SING N N 3
0MW C5 C6 SING N N 4
0MW C7 C6 SING N N 5
0MW C7 N1 SING N N 6
0MW O1 P1 DOUB N N 7
0MW O3 P1 SING N N 8
0MW C8 C9 SING N N 9
0MW C8 N1 SING N N 10
0MW C9 P1 SING N N 11
0MW C9 P2 SING N N 12
0MW P1 O2 SING N N 13
0MW O4 P2 DOUB N N 14
0MW P2 O6 SING N N 15
0MW P2 O5 SING N N 16
0MW O2 H1 SING N N 17
0MW O3 H2 SING N N 18
0MW C9 H3 SING N N 19
0MW O5 H4 SING N N 20
0MW O6 H5 SING N N 21
0MW C8 H6 SING N N 22
0MW C8 H7 SING N N 23
0MW N1 H8 SING N N 24
0MW C7 H10 SING N N 25
0MW C7 H11 SING N N 26
0MW C6 H12 SING N N 27
0MW C6 H13 SING N N 28
0MW C5 H14 SING N N 29
0MW C5 H15 SING N N 30
0MW C4 H16 SING N N 31
0MW C4 H17 SING N N 32
0MW C3 H18 SING N N 33
0MW C3 H19 SING N N 34
0MW C2 H20 SING N N 35
0MW C2 H21 SING N N 36
0MW C2 H22 SING N N 37
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0MW SMILES ACDLabs 12.01 O=P(O)(O)C(CNCCCCCC)P(=O)(O)O
0MW InChI InChI 1.03 InChI=1S/C8H21NO6P2/c1-2-3-4-5-6-9-7-8(16(10,11)12)17(13,14)15/h8-9H,2-7H2,1H3,(H2,10,11,12)(H2,13,14,15)
0MW InChIKey InChI 1.03 QDLXIUDMSHZYCG-UHFFFAOYSA-N
0MW SMILES_CANONICAL CACTVS 3.370 CCCCCCNCC([P](O)(O)=O)[P](O)(O)=O
0MW SMILES CACTVS 3.370 CCCCCCNCC([P](O)(O)=O)[P](O)(O)=O
0MW SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CCCCCCNCC(P(=O)(O)O)P(=O)(O)O
0MW SMILES "OpenEye OEToolkits" 1.7.6 CCCCCCNCC(P(=O)(O)O)P(=O)(O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
0MW "SYSTEMATIC NAME" ACDLabs 12.01 "[2-(hexylamino)ethane-1,1-diyl]bis(phosphonic acid)"
0MW "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[2-(hexylamino)-1-phosphono-ethyl]phosphonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0MW 'Create component' 2012-03-08 RCSB
0MW 'Initial release' 2013-01-11 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
0MW O1 O 10.794 4.785 1
0MW P1 P 9.495 4.035 2
0MW O2 O 8.745 5.334 3
0MW O3 O 10.245 2.736 4
0MW C9 C 8.196 3.285 5
0MW P2 P 6.897 4.035 6
0MW O5 O 7.647 5.334 7
0MW O4 O 5.598 4.785 8
0MW O6 O 6.147 2.736 9
0MW C8 C 8.196 1.785 10
0MW N1 N 6.897 1.035 11
0MW C7 C 6.897 -0.465 12
0MW C6 C 5.598 -1.215 13
0MW C5 C 5.598 -2.715 14
0MW C4 C 4.299 -3.465 15
0MW C3 C 4.299 -4.965 16
0MW C2 C 3.000 -5.715 17
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
0MW C2 C3 SINGLE NONE 1
0MW C3 C4 SINGLE NONE 2
0MW C4 C5 SINGLE NONE 3
0MW C5 C6 SINGLE NONE 4
0MW C7 C6 SINGLE NONE 5
0MW C7 N1 SINGLE NONE 6
0MW O1 P1 DOUBLE NONE 7
0MW O3 P1 SINGLE NONE 8
0MW C8 C9 SINGLE NONE 9
0MW C8 N1 SINGLE NONE 10
0MW C9 P1 SINGLE NONE 11
0MW C9 P2 SINGLE NONE 12
0MW P1 O2 SINGLE NONE 13
0MW O4 P2 DOUBLE NONE 14
0MW P2 O6 SINGLE NONE 15
0MW P2 O5 SINGLE NONE 16
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id 0MW
_pdbe_chem_comp_rdkit_properties.exactmw 289.084
_pdbe_chem_comp_rdkit_properties.amw 289.205
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 17
_pdbe_chem_comp_rdkit_properties.NumAtoms 38
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 130.856
_pdbe_chem_comp_rdkit_properties.tpsa 127.090
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.838
_pdbe_chem_comp_rdkit_properties.CrippenMR 64.888
_pdbe_chem_comp_rdkit_properties.chi0v 9.580
_pdbe_chem_comp_rdkit_properties.chi1v 6.575
_pdbe_chem_comp_rdkit_properties.chi2v 3.681
_pdbe_chem_comp_rdkit_properties.chi3v 3.681
_pdbe_chem_comp_rdkit_properties.chi4v 2.014
_pdbe_chem_comp_rdkit_properties.chi0n 28.791
_pdbe_chem_comp_rdkit_properties.chi1n 13.570
_pdbe_chem_comp_rdkit_properties.chi2n 0.974
_pdbe_chem_comp_rdkit_properties.chi3n 0.974
_pdbe_chem_comp_rdkit_properties.chi4n 0.469
_pdbe_chem_comp_rdkit_properties.hallKierAlpha 0.260
_pdbe_chem_comp_rdkit_properties.kappa1 3.287
_pdbe_chem_comp_rdkit_properties.kappa2 7.642
_pdbe_chem_comp_rdkit_properties.kappa3 8.055
_pdbe_chem_comp_rdkit_properties.Phi 1.477
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
0MW UniChem ChEMBL CHEMBL259192
0MW UniChem PDBe 0MW
0MW UniChem ZINC ZINC000029060918
0MW UniChem SureChEMBL SCHEMBL8674064
0MW UniChem 'PubChem TPHARMA' 53837713
0MW UniChem BindingDb 50341917
0MW UniChem BRENDA 25830
0MW UniChem BRENDA 28816
0MW UniChem BRENDA 88606
0MW UniChem PubChem 19689034
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
0MW O1 -5.246 1.790 0.363 ETKDGv3 1
0MW P1 -4.503 0.476 0.448 ETKDGv3 2
0MW O2 -5.066 -0.371 1.802 ETKDGv3 3
0MW O3 -4.812 -0.423 -0.953 ETKDGv3 4
0MW C9 -2.711 0.802 0.631 ETKDGv3 5
0MW P2 -2.072 1.716 -0.824 ETKDGv3 6
0MW O5 -2.045 0.711 -2.188 ETKDGv3 7
0MW O4 -0.660 2.174 -0.536 ETKDGv3 8
0MW O6 -3.025 3.084 -1.126 ETKDGv3 9
0MW C8 -1.943 -0.513 0.835 ETKDGv3 10
0MW N1 -0.531 -0.243 1.135 ETKDGv3 11
0MW C7 0.232 -1.495 1.198 ETKDGv3 12
0MW C6 1.726 -1.205 1.377 ETKDGv3 13
0MW C5 2.310 -0.455 0.171 ETKDGv3 14
0MW C4 3.817 -0.220 0.347 ETKDGv3 15
0MW C3 4.414 0.646 -0.773 ETKDGv3 16
0MW C2 4.468 -0.079 -2.117 ETKDGv3 17
0MW H1 -4.858 -1.322 1.619 ETKDGv3 18
0MW H2 -4.385 -1.303 -0.796 ETKDGv3 19
0MW H3 -2.579 1.443 1.529 ETKDGv3 20
0MW H4 -2.983 0.667 -2.500 ETKDGv3 21
0MW H5 -3.758 2.768 -1.712 ETKDGv3 22
0MW H6 -2.397 -1.081 1.678 ETKDGv3 23
0MW H7 -2.028 -1.130 -0.087 ETKDGv3 24
0MW H8 -0.483 0.212 2.077 ETKDGv3 25
0MW H10 -0.120 -2.113 2.055 ETKDGv3 26
0MW H11 0.091 -2.085 0.264 ETKDGv3 27
0MW H12 2.260 -2.173 1.500 ETKDGv3 28
0MW H13 1.878 -0.609 2.303 ETKDGv3 29
0MW H14 2.131 -1.055 -0.747 ETKDGv3 30
0MW H15 1.796 0.525 0.061 ETKDGv3 31
0MW H16 4.350 -1.195 0.394 ETKDGv3 32
0MW H17 3.988 0.304 1.313 ETKDGv3 33
0MW H18 5.452 0.924 -0.485 ETKDGv3 34
0MW H19 3.832 1.587 -0.880 ETKDGv3 35
0MW H20 3.445 -0.256 -2.509 ETKDGv3 36
0MW H21 4.999 -1.050 -2.014 ETKDGv3 37
0MW H22 5.016 0.547 -2.852 ETKDGv3 38
#