data_0QE
#
_chem_comp.id 0QE
_chem_comp.name chloromethane
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C H3 Cl'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms 'Chloro Methyl group'
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2008-12-08
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 50.488
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 0QE
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1a0h
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0QE C1 C1 C 0 1 N N N Y Y N 67.590 31.292 20.366 1.244 0.000 -0.000 C1 0QE 1
0QE CL1 CL1 CL 0 0 N Y N Y Y N 68.256 30.868 19.140 -0.559 -0.000 0.000 CL1 0QE 2
0QE H H H 0 1 N N N Y Y N 68.333 31.399 21.170 1.608 -0.010 1.028 H 0QE 3
0QE HA HA H 0 1 N N N Y Y N 67.092 32.258 20.197 1.608 -0.885 -0.522 HA 0QE 4
0QE HB HB H 0 1 N N N Y Y N 66.842 30.539 20.656 1.608 0.895 -0.505 HB 0QE 5
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0QE C1 CL1 SING N N 1
0QE C1 H SING N N 2
0QE C1 HA SING N N 3
0QE C1 HB SING N N 4
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0QE SMILES ACDLabs 12.01 ClC
0QE SMILES_CANONICAL CACTVS 3.370 CCl
0QE SMILES CACTVS 3.370 CCl
0QE SMILES_CANONICAL 'OpenEye OEToolkits' 1.7.0 CCl
0QE SMILES 'OpenEye OEToolkits' 1.7.0 CCl
0QE InChI InChI 1.03 InChI=1S/CH3Cl/c1-2/h1H3
0QE InChIKey InChI 1.03 NEHMKBQYUWJMIP-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
0QE 'SYSTEMATIC NAME' ACDLabs 12.01 chloromethane
0QE 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 1.7.0 chloromethane
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0QE 'Create component' 2008-12-08 RCSB
0QE 'Modify descriptor' 2011-06-04 RCSB
0QE 'Modify synonyms' 2020-06-05 PDBE
0QE 'Modify backbone' 2023-11-03 PDBE
0QE 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 0QE
_pdbx_chem_comp_synonyms.name 'Chloro Methyl group'
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id 0QE
_pdbx_chem_comp_pcm.modified_residue_id ?
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Non-standard residue'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain and backbone'
_pdbx_chem_comp_pcm.polypeptide_position C-terminal
_pdbx_chem_comp_pcm.comp_id_linking_atom ?
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom ?
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
_pdbx_chem_comp_pcm.first_instance_model_db_code 1PAD
#
_pdbe_chem_comp_synonyms.comp_id 0QE
_pdbe_chem_comp_synonyms.name 'Chloro Methyl group'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
0QE C1 C 3.000 0.000 1
0QE CL1 Cl 4.500 0.000 2
#
_pdbe_chem_comp_bond_depiction.comp_id 0QE
_pdbe_chem_comp_bond_depiction.atom_id_1 C1
_pdbe_chem_comp_bond_depiction.atom_id_2 CL1
_pdbe_chem_comp_bond_depiction.value_order SINGLE
_pdbe_chem_comp_bond_depiction.bond_dir NONE
_pdbe_chem_comp_bond_depiction.pdbx_ordinal 1
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id 0QE
_pdbe_chem_comp_rdkit_properties.exactmw 49.992
_pdbe_chem_comp_rdkit_properties.amw 50.488
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 0
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 0
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 0
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 2
_pdbe_chem_comp_rdkit_properties.NumAtoms 5
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 1
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 23.257
_pdbe_chem_comp_rdkit_properties.tpsa 0
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.855
_pdbe_chem_comp_rdkit_properties.CrippenMR 11.777
_pdbe_chem_comp_rdkit_properties.chi0v 1.634
_pdbe_chem_comp_rdkit_properties.chi1v 0.567
_pdbe_chem_comp_rdkit_properties.chi2v 0
_pdbe_chem_comp_rdkit_properties.chi3v 0
_pdbe_chem_comp_rdkit_properties.chi4v 0
_pdbe_chem_comp_rdkit_properties.chi0n 3.878
_pdbe_chem_comp_rdkit_properties.chi1n 1.689
_pdbe_chem_comp_rdkit_properties.chi2n 0
_pdbe_chem_comp_rdkit_properties.chi3n 0
_pdbe_chem_comp_rdkit_properties.chi4n 0
_pdbe_chem_comp_rdkit_properties.hallKierAlpha 0.290
_pdbe_chem_comp_rdkit_properties.kappa1 0.207
_pdbe_chem_comp_rdkit_properties.kappa2 1.290
_pdbe_chem_comp_rdkit_properties.kappa3 1.738
_pdbe_chem_comp_rdkit_properties.Phi 0.134
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
0QE UniChem ChEMBL CHEMBL117545
0QE UniChem PDBe 0QE
0QE UniChem 'KEGG LIGAND' C19446
0QE UniChem ChEBI 36014
0QE UniChem eMolecules 495569
0QE UniChem fdasrs A6R43525YO
0QE UniChem HMDB HMDB0250118
0QE UniChem NMRShiftDB 20028917
0QE UniChem ACTor 2108-20-5
0QE UniChem Nikkaji J1.245.456B
0QE UniChem Nikkaji J298.854B
0QE UniChem 'EPA CompTox Dashboard' DTXSID0021541
0QE UniChem MetaboLights MTBLC36014
0QE UniChem BRENDA 105663
0QE UniChem BRENDA 154160
0QE UniChem BRENDA 52817
0QE UniChem BRENDA 9126
0QE UniChem Rhea 36014
0QE UniChem ChemicalBook CB9673584
0QE UniChem rxnorm 'METHYL CHLORIDE'
0QE UniChem Nikkaji J1.430C
0QE UniChem SureChEMBL SCHEMBL958
0QE UniChem 'PubChem TPHARMA' 14747279
0QE UniChem PubChem 6327
0QE UniChem Mcule MCULE-5688128737
0QE UniChem ACTor 74-87-3
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
0QE C1 -0.134 -0.004 -0.000 ETKDGv3 1
0QE CL1 1.643 0.054 0.006 ETKDGv3 2
0QE H -0.481 -0.592 -0.875 ETKDGv3 3
0QE HA -0.491 -0.485 0.933 ETKDGv3 4
0QE HB -0.538 1.027 -0.063 ETKDGv3 5
#