data_0S5
#
_chem_comp.id 0S5
_chem_comp.name N-benzoyl-1-[(2R)-3-cyclopentyl-2-{[formyl(hydroxy)amino]methyl}propanoyl]-L-prolinamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H29 N3 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-05-16
_chem_comp.pdbx_modified_date 2012-05-25
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 415.483
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 0S5
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4EOX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0S5 C26 C26 C 0 1 Y N N N N N 17.904 -6.380 1.169 7.521 1.502 0.280 C26 0S5 1
0S5 C25 C25 C 0 1 Y N N N N N 17.787 -5.625 2.322 6.838 0.558 1.025 C25 0S5 2
0S5 C27 C27 C 0 1 Y N N N N N 18.920 -7.305 1.005 6.935 2.065 -0.840 C27 0S5 3
0S5 C24 C24 C 0 1 Y N N N N N 18.701 -5.812 3.338 5.568 0.168 0.654 C24 0S5 4
0S5 C28 C28 C 0 1 Y N N N N N 19.859 -7.488 1.996 5.664 1.688 -1.221 C28 0S5 5
0S5 C23 C23 C 0 1 Y N N N N N 19.716 -6.723 3.147 4.973 0.728 -0.479 C23 0S5 6
0S5 C29 C29 C 0 1 N N N N N N 28.582 -2.197 4.843 -2.960 1.649 2.262 C29 0S5 7
0S5 C21 C21 C 0 1 N N N N N N 20.674 -6.849 4.243 3.611 0.319 -0.880 C21 0S5 8
0S5 C18 C18 C 0 1 N N N N N N 23.005 -7.309 4.613 1.704 -0.981 -0.528 C18 0S5 9
0S5 C11 C11 C 0 1 N N N N N N 25.190 -5.304 4.757 -1.122 -0.628 0.077 C11 0S5 10
0S5 C8 C8 C 0 1 N N N N N N 25.037 -5.564 9.481 -6.494 1.862 -1.755 C8 0S5 11
0S5 C9 C9 C 0 1 N N N N N N 24.646 -4.152 9.890 -6.486 0.380 -2.168 C9 0S5 12
0S5 C15 C15 C 0 1 N N N N N N 26.192 -8.770 4.405 -0.034 -4.202 0.191 C15 0S5 13
0S5 C16 C16 C 0 1 N N N N N N 24.819 -8.794 3.778 1.221 -3.432 -0.298 C16 0S5 14
0S5 C7 C7 C 0 1 N N N N N N 25.985 -5.432 8.278 -5.112 2.154 -1.133 C7 0S5 15
0S5 C10 C10 C 0 1 N N N N N N 25.194 -3.232 8.818 -5.100 -0.178 -1.783 C10 0S5 16
0S5 C14 C14 C 0 1 N N N N N N 26.490 -7.393 4.955 -1.147 -3.136 0.108 C14 0S5 17
0S5 C17 C17 C 0 1 N N S N N N 24.310 -7.366 3.859 0.961 -2.017 0.276 C17 0S5 18
0S5 C6 C6 C 0 1 N N N N N N 25.503 -4.186 7.647 -4.609 0.768 -0.658 C6 0S5 19
0S5 C5 C5 C 0 1 N N N N N N 26.128 -3.558 6.433 -3.083 0.749 -0.562 C5 0S5 20
0S5 C3 C3 C 0 1 N N N N N N 27.066 -4.040 4.194 -3.151 -0.658 1.502 C3 0S5 21
0S5 C4 C4 C 0 1 N N R N N N 26.387 -4.678 5.384 -2.628 -0.570 0.067 C4 0S5 22
0S5 N13 N13 N 0 1 N N N N N N 25.278 -6.679 4.663 -0.494 -1.819 0.147 N13 0S5 23
0S5 N20 N20 N 0 1 N N N N N N 21.950 -7.026 3.786 2.946 -0.608 -0.162 N20 0S5 24
0S5 N2 N2 N 0 1 N N N N N N 28.322 -3.477 4.520 -2.514 0.379 2.318 N2 0S5 25
0S5 O30 O30 O 0 1 N N N N N N 29.721 -1.861 5.122 -2.433 2.507 2.938 O30 0S5 26
0S5 O22 O22 O 0 1 N N N N N N 20.354 -6.678 5.407 3.090 0.818 -1.858 O22 0S5 27
0S5 O19 O19 O 0 1 N N N N N N 22.924 -7.464 5.825 1.185 -0.483 -1.503 O19 0S5 28
0S5 O12 O12 O 0 1 N N N N N N 24.233 -4.709 4.295 -0.475 0.396 0.021 O12 0S5 29
0S5 O1 O1 O 0 1 N N N N N N 29.440 -4.317 4.669 -1.431 0.046 3.167 O1 0S5 30
0S5 H1 H1 H 0 1 N N N N N N 17.184 -6.244 0.376 8.515 1.804 0.575 H1 0S5 31
0S5 H2 H2 H 0 1 N N N N N N 16.993 -4.901 2.425 7.300 0.126 1.901 H2 0S5 32
0S5 H3 H3 H 0 1 N N N N N N 18.977 -7.886 0.096 7.474 2.802 -1.418 H3 0S5 33
0S5 H4 H4 H 0 1 N N N N N N 18.623 -5.257 4.261 5.036 -0.569 1.236 H4 0S5 34
0S5 H5 H5 H 0 1 N N N N N N 20.669 -8.194 1.884 5.207 2.128 -2.095 H5 0S5 35
0S5 H6 H6 H 0 1 N N N N N N 27.784 -1.469 4.855 -3.787 1.903 1.615 H6 0S5 36
0S5 H7 H7 H 0 1 N N N N N N 24.142 -6.137 9.197 -6.650 2.493 -2.630 H7 0S5 37
0S5 H8 H8 H 0 1 N N N N N N 25.549 -6.071 10.312 -7.280 2.041 -1.021 H8 0S5 38
0S5 H9 H9 H 0 1 N N N N N N 25.086 -3.903 10.867 -7.267 -0.161 -1.634 H9 0S5 39
0S5 H10 H10 H 0 1 N N N N N N 23.551 -4.061 9.947 -6.639 0.291 -3.243 H10 0S5 40
0S5 H11 H11 H 0 1 N N N N N N 26.231 -9.504 5.223 -0.254 -5.040 -0.470 H11 0S5 41
0S5 H12 H12 H 0 1 N N N N N N 24.154 -9.471 4.334 2.131 -3.863 0.121 H12 0S5 42
0S5 H13 H13 H 0 1 N N N N N N 24.881 -9.121 2.730 1.267 -3.410 -1.387 H13 0S5 43
0S5 H14 H14 H 0 1 N N N N N N 25.888 -6.290 7.596 -4.437 2.569 -1.881 H14 0S5 44
0S5 H15 H15 H 0 1 N N N N N N 27.032 -5.338 8.602 -5.210 2.836 -0.289 H15 0S5 45
0S5 H16 H16 H 0 1 N N N N N N 26.107 -2.726 9.164 -5.189 -1.199 -1.411 H16 0S5 46
0S5 H17 H17 H 0 1 N N N N N N 24.446 -2.480 8.526 -4.424 -0.141 -2.637 H17 0S5 47
0S5 H18 H18 H 0 1 N N N N N N 26.680 -7.429 6.038 -1.699 -3.248 -0.825 H18 0S5 48
0S5 H19 H19 H 0 1 N N N N N N 24.210 -6.925 2.856 1.261 -1.971 1.322 H19 0S5 49
0S5 H20 H20 H 0 1 N N N N N N 24.499 -4.460 7.291 -5.061 0.499 0.297 H20 0S5 50
0S5 H21 H21 H 0 1 N N N N N N 27.079 -3.080 6.709 -2.654 0.842 -1.560 H21 0S5 51
0S5 H22 H22 H 0 1 N N N N N N 25.447 -2.804 6.012 -2.747 1.581 0.057 H22 0S5 52
0S5 H23 H23 H 0 1 N N N N N N 26.415 -3.245 3.802 -4.231 -0.511 1.505 H23 0S5 53
0S5 H24 H24 H 0 1 N N N N N N 27.214 -4.808 3.420 -2.917 -1.640 1.914 H24 0S5 54
0S5 H25 H25 H 0 1 N N N N N N 27.038 -5.449 5.823 -3.020 -1.404 -0.515 H25 0S5 55
0S5 H26 H26 H 0 1 N N N N N N 22.121 -6.945 2.804 3.362 -1.006 0.619 H26 0S5 56
0S5 H27 H27 H 0 1 N N N N N N 30.191 -3.801 4.937 -1.077 0.795 3.665 H27 0S5 57
0S5 H28 H28 H 0 1 N N N N N N 26.944 -9.028 3.644 0.095 -4.545 1.217 H28 0S5 58
0S5 H29 H29 H 0 1 N N N N N N 27.353 -6.939 4.446 -1.825 -3.241 0.955 H29 0S5 59
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0S5 C27 C26 DOUB Y N 1
0S5 C27 C28 SING Y N 2
0S5 C26 C25 SING Y N 3
0S5 C28 C23 DOUB Y N 4
0S5 C25 C24 DOUB Y N 5
0S5 C23 C24 SING Y N 6
0S5 C23 C21 SING N N 7
0S5 C16 C17 SING N N 8
0S5 C16 C15 SING N N 9
0S5 N20 C21 SING N N 10
0S5 N20 C18 SING N N 11
0S5 C17 C18 SING N N 12
0S5 C17 N13 SING N N 13
0S5 C3 N2 SING N N 14
0S5 C3 C4 SING N N 15
0S5 C21 O22 DOUB N N 16
0S5 O12 C11 DOUB N N 17
0S5 C15 C14 SING N N 18
0S5 N2 O1 SING N N 19
0S5 N2 C29 SING N N 20
0S5 C18 O19 DOUB N N 21
0S5 N13 C11 SING N N 22
0S5 N13 C14 SING N N 23
0S5 C11 C4 SING N N 24
0S5 C29 O30 DOUB N N 25
0S5 C4 C5 SING N N 26
0S5 C5 C6 SING N N 27
0S5 C6 C7 SING N N 28
0S5 C6 C10 SING N N 29
0S5 C7 C8 SING N N 30
0S5 C10 C9 SING N N 31
0S5 C8 C9 SING N N 32
0S5 C26 H1 SING N N 33
0S5 C25 H2 SING N N 34
0S5 C27 H3 SING N N 35
0S5 C24 H4 SING N N 36
0S5 C28 H5 SING N N 37
0S5 C29 H6 SING N N 38
0S5 C8 H7 SING N N 39
0S5 C8 H8 SING N N 40
0S5 C9 H9 SING N N 41
0S5 C9 H10 SING N N 42
0S5 C15 H11 SING N N 43
0S5 C16 H12 SING N N 44
0S5 C16 H13 SING N N 45
0S5 C7 H14 SING N N 46
0S5 C7 H15 SING N N 47
0S5 C10 H16 SING N N 48
0S5 C10 H17 SING N N 49
0S5 C14 H18 SING N N 50
0S5 C17 H19 SING N N 51
0S5 C6 H20 SING N N 52
0S5 C5 H21 SING N N 53
0S5 C5 H22 SING N N 54
0S5 C3 H23 SING N N 55
0S5 C3 H24 SING N N 56
0S5 C4 H25 SING N N 57
0S5 N20 H26 SING N N 58
0S5 O1 H27 SING N N 59
0S5 C15 H28 SING N N 60
0S5 C14 H29 SING N N 61
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0S5 SMILES ACDLabs 12.01 O=C(NC(=O)c1ccccc1)C3N(C(=O)C(CC2CCCC2)CN(O)C=O)CCC3
0S5 InChI InChI 1.03 InChI=1S/C22H29N3O5/c26-15-24(30)14-18(13-16-7-4-5-8-16)22(29)25-12-6-11-19(25)21(28)23-20(27)17-9-2-1-3-10-17/h1-3,9-10,15-16,18-19,30H,4-8,11-14H2,(H,23,27,28)/t18-,19+/m1/s1
0S5 InChIKey InChI 1.03 JPSWIPZHYDYDLN-MOPGFXCFSA-N
0S5 SMILES_CANONICAL CACTVS 3.370 ON(C[C@@H](CC1CCCC1)C(=O)N2CCC[C@H]2C(=O)NC(=O)c3ccccc3)C=O
0S5 SMILES CACTVS 3.370 ON(C[CH](CC1CCCC1)C(=O)N2CCC[CH]2C(=O)NC(=O)c3ccccc3)C=O
0S5 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 c1ccc(cc1)C(=O)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CC3CCCC3)CN(C=O)O
0S5 SMILES "OpenEye OEToolkits" 1.7.6 c1ccc(cc1)C(=O)NC(=O)C2CCCN2C(=O)C(CC3CCCC3)CN(C=O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
0S5 "SYSTEMATIC NAME" ACDLabs 12.01 N-benzoyl-1-[(2R)-3-cyclopentyl-2-{[formyl(hydroxy)amino]methyl}propanoyl]-L-prolinamide
0S5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 (2S)-1-[(2R)-2-(cyclopentylmethyl)-3-[methanoyl(oxidanyl)amino]propanoyl]-N-(phenylcarbonyl)pyrrolidine-2-carboxamide
#
_pdbx_chem_comp_audit.comp_id 0S5
_pdbx_chem_comp_audit.action_type 'Create component'
_pdbx_chem_comp_audit.date 2012-05-16
_pdbx_chem_comp_audit.processing_site RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
0S5 C26 C 6.131 -7.904 1
0S5 C25 C 7.430 -7.154 2
0S5 C27 C 4.832 -7.154 3
0S5 C24 C 7.430 -5.654 4
0S5 C28 C 4.832 -5.654 5
0S5 C23 C 6.131 -4.904 6
0S5 C29 C 4.427 5.103 7
0S5 C21 C 6.131 -3.404 8
0S5 C18 C 7.430 -1.154 9
0S5 C11 C 7.771 2.092 10
0S5 C8 C 11.035 7.592 11
0S5 C9 C 9.567 7.904 12
0S5 C15 C 11.103 0.101 13
0S5 C16 C 10.099 -1.014 14
0S5 C7 C 11.191 6.100 15
0S5 C10 C 8.817 6.604 16
0S5 C14 C 10.353 1.400 17
0S5 C17 C 8.729 -0.404 18
0S5 C6 C 9.821 5.490 19
0S5 C5 C 9.509 4.023 20
0S5 C3 C 6.968 4.563 21
0S5 C4 C 8.083 3.559 22
0S5 N13 N 8.885 1.088 23
0S5 N20 N 7.430 -2.654 24
0S5 N2 N 5.541 4.099 25
0S5 O30 O 3.000 4.639 26
0S5 O22 O 4.832 -2.654 27
0S5 O19 O 6.131 -0.404 28
0S5 O12 O 6.344 1.628 29
0S5 O1 O 5.229 2.632 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
0S5 C27 C26 DOUBLE NONE 1
0S5 C27 C28 SINGLE NONE 2
0S5 C26 C25 SINGLE NONE 3
0S5 C28 C23 DOUBLE NONE 4
0S5 C25 C24 DOUBLE NONE 5
0S5 C23 C24 SINGLE NONE 6
0S5 C23 C21 SINGLE NONE 7
0S5 C16 C17 SINGLE NONE 8
0S5 C16 C15 SINGLE NONE 9
0S5 N20 C21 SINGLE NONE 10
0S5 N20 C18 SINGLE NONE 11
0S5 C17 C18 SINGLE BEGINWEDGE 12
0S5 C17 N13 SINGLE NONE 13
0S5 C3 N2 SINGLE NONE 14
0S5 C4 C3 SINGLE BEGINWEDGE 15
0S5 C21 O22 DOUBLE NONE 16
0S5 O12 C11 DOUBLE NONE 17
0S5 C15 C14 SINGLE NONE 18
0S5 N2 O1 SINGLE NONE 19
0S5 N2 C29 SINGLE NONE 20
0S5 C18 O19 DOUBLE NONE 21
0S5 N13 C11 SINGLE NONE 22
0S5 N13 C14 SINGLE NONE 23
0S5 C11 C4 SINGLE NONE 24
0S5 C29 O30 DOUBLE NONE 25
0S5 C4 C5 SINGLE NONE 26
0S5 C5 C6 SINGLE NONE 27
0S5 C6 C7 SINGLE NONE 28
0S5 C6 C10 SINGLE NONE 29
0S5 C7 C8 SINGLE NONE 30
0S5 C10 C9 SINGLE NONE 31
0S5 C8 C9 SINGLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
0S5 MurckoScaffold S1 scaffold 'O=C(NC(=O)[C@@H]1CCCN1C(=O)CCC1CCCC1)c1ccccc1' InChI=1S/C20H26N2O3/c23-18(13-12-15-7-4-5-8-15)22-14-6-11-17(22)20(25)21-19(24)16-9-2-1-3-10-16/h1-3,9-10,15,17H,4-8,11-14H2,(H,21,24,25)/t17-/m0/s1 QZSDJAXCEOLQNV-KRWDZBQOSA-N
0S5 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
0S5 cyclopentane F2 fragment C1CCCC1 InChI=1S/C5H10/c1-2-4-5-3-1/h1-5H2 RGSFGYAAUTVSQA-UHFFFAOYSA-N
0S5 peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
0S5 phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
0S5 C26 S1 1
0S5 C25 S1 1
0S5 C27 S1 1
0S5 C24 S1 1
0S5 C28 S1 1
0S5 C23 S1 1
0S5 C21 S1 1
0S5 C18 S1 1
0S5 C11 S1 1
0S5 C8 S1 1
0S5 C9 S1 1
0S5 C15 S1 1
0S5 C16 S1 1
0S5 C7 S1 1
0S5 C10 S1 1
0S5 C14 S1 1
0S5 C17 S1 1
0S5 C6 S1 1
0S5 C5 S1 1
0S5 C4 S1 1
0S5 N13 S1 1
0S5 N20 S1 1
0S5 O22 S1 1
0S5 O19 S1 1
0S5 O12 S1 1
0S5 N13 F1 1
0S5 C11 F1 1
0S5 O12 F1 1
0S5 C4 F1 1
0S5 N20 F1 2
0S5 C21 F1 2
0S5 O22 F1 2
0S5 C23 F1 2
0S5 N20 F1 3
0S5 C18 F1 3
0S5 O19 F1 3
0S5 C17 F1 3
0S5 C8 F2 1
0S5 C7 F2 1
0S5 C6 F2 1
0S5 C10 F2 1
0S5 C9 F2 1
0S5 O19 F3 1
0S5 C18 F3 1
0S5 C17 F3 1
0S5 N13 F3 1
0S5 C26 F4 1
0S5 C27 F4 1
0S5 C28 F4 1
0S5 C23 F4 1
0S5 C24 F4 1
0S5 C25 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 0S5
_pdbe_chem_comp_rdkit_properties.exactmw 415.211
_pdbe_chem_comp_rdkit_properties.amw 415.490
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 59
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 4
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.545
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 216.612
_pdbe_chem_comp_rdkit_properties.tpsa 107.020
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.923
_pdbe_chem_comp_rdkit_properties.CrippenMR 108.006
_pdbe_chem_comp_rdkit_properties.chi0v 14.383
_pdbe_chem_comp_rdkit_properties.chi1v 7.564
_pdbe_chem_comp_rdkit_properties.chi2v 3.092
_pdbe_chem_comp_rdkit_properties.chi3v 3.092
_pdbe_chem_comp_rdkit_properties.chi4v 1.886
_pdbe_chem_comp_rdkit_properties.chi0n 43.383
_pdbe_chem_comp_rdkit_properties.chi1n 21.920
_pdbe_chem_comp_rdkit_properties.chi2n 3.092
_pdbe_chem_comp_rdkit_properties.chi3n 3.092
_pdbe_chem_comp_rdkit_properties.chi4n 1.886
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.740
_pdbe_chem_comp_rdkit_properties.kappa1 5.538
_pdbe_chem_comp_rdkit_properties.kappa2 10.337
_pdbe_chem_comp_rdkit_properties.kappa3 5.443
_pdbe_chem_comp_rdkit_properties.Phi 1.908
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
0S5 UniChem ChEMBL CHEMBL2032119
0S5 UniChem PDBe 0S5
0S5 UniChem ZINC ZINC000034873861
0S5 UniChem SureChEMBL SCHEMBL2211900
0S5 UniChem 'PubChem TPHARMA' 24418391
0S5 UniChem PubChem 16035825
0S5 UniChem BindingDb 50383982
0S5 UniChem BRENDA 12215
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
0S5 C26 3.967 3.557 -1.706 ETKDGv3 1
0S5 C25 5.152 2.970 -1.051 ETKDGv3 2
0S5 C27 2.782 2.945 -1.614 ETKDGv3 3
0S5 C24 5.044 1.824 -0.368 ETKDGv3 4
0S5 C28 2.656 1.681 -0.859 ETKDGv3 5
0S5 C23 3.733 1.128 -0.265 ETKDGv3 6
0S5 C29 -3.597 -2.495 3.215 ETKDGv3 7
0S5 C21 3.630 -0.131 0.513 ETKDGv3 8
0S5 C18 2.251 -2.157 1.165 ETKDGv3 9
0S5 C11 -0.846 -1.656 1.156 ETKDGv3 10
0S5 C8 -2.185 3.791 0.314 ETKDGv3 11
0S5 C9 -1.139 3.630 -0.783 ETKDGv3 12
0S5 C15 0.893 -3.599 -1.576 ETKDGv3 13
0S5 C16 1.625 -4.082 -0.326 ETKDGv3 14
0S5 C7 -3.017 2.508 0.329 ETKDGv3 15
0S5 C10 -1.549 2.402 -1.577 ETKDGv3 16
0S5 C14 -0.285 -2.769 -1.082 ETKDGv3 17
0S5 C17 1.179 -3.159 0.810 ETKDGv3 18
0S5 C6 -2.303 1.509 -0.590 ETKDGv3 19
0S5 C5 -1.337 0.581 0.200 ETKDGv3 20
0S5 C3 -3.144 -0.673 1.532 ETKDGv3 21
0S5 C4 -1.944 -0.792 0.568 ETKDGv3 22
0S5 N13 -0.014 -2.484 0.319 ETKDGv3 23
0S5 N20 2.569 -1.073 0.273 ETKDGv3 24
0S5 N2 -3.673 -1.996 1.875 ETKDGv3 25
0S5 O30 -4.070 -3.627 3.499 ETKDGv3 26
0S5 O22 4.512 -0.385 1.379 ETKDGv3 27
0S5 O19 2.871 -2.291 2.255 ETKDGv3 28
0S5 O12 -0.589 -1.570 2.389 ETKDGv3 29
0S5 O1 -4.274 -2.743 0.915 ETKDGv3 30
0S5 H1 4.060 4.484 -2.258 ETKDGv3 31
0S5 H2 6.110 3.470 -1.126 ETKDGv3 32
0S5 H3 1.910 3.376 -2.090 ETKDGv3 33
0S5 H4 5.924 1.404 0.104 ETKDGv3 34
0S5 H5 1.678 1.235 -0.777 ETKDGv3 35
0S5 H6 -3.130 -1.907 3.994 ETKDGv3 36
0S5 H7 -2.836 4.668 0.104 ETKDGv3 37
0S5 H8 -1.688 3.943 1.298 ETKDGv3 38
0S5 H9 -1.090 4.529 -1.434 ETKDGv3 39
0S5 H10 -0.139 3.457 -0.326 ETKDGv3 40
0S5 H11 1.574 -2.961 -2.181 ETKDGv3 41
0S5 H12 2.727 -4.081 -0.479 ETKDGv3 42
0S5 H13 1.306 -5.124 -0.099 ETKDGv3 43
0S5 H14 -4.029 2.721 -0.081 ETKDGv3 44
0S5 H15 -3.139 2.135 1.367 ETKDGv3 45
0S5 H16 -2.244 2.713 -2.389 ETKDGv3 46
0S5 H17 -0.673 1.906 -2.047 ETKDGv3 47
0S5 H18 -1.230 -3.347 -1.169 ETKDGv3 48
0S5 H19 0.920 -3.770 1.704 ETKDGv3 49
0S5 H20 -3.044 0.897 -1.151 ETKDGv3 50
0S5 H21 -0.957 1.091 1.113 ETKDGv3 51
0S5 H22 -0.447 0.371 -0.429 ETKDGv3 52
0S5 H23 -3.959 -0.096 1.046 ETKDGv3 53
0S5 H24 -2.843 -0.120 2.449 ETKDGv3 54
0S5 H25 -2.322 -1.264 -0.363 ETKDGv3 55
0S5 H26 2.020 -0.990 -0.610 ETKDGv3 56
0S5 H27 -3.551 -3.305 0.535 ETKDGv3 57
0S5 H28 0.551 -4.454 -2.198 ETKDGv3 58
0S5 H29 -0.359 -1.826 -1.666 ETKDGv3 59
#