data_1DP
#
_chem_comp.id 1DP
_chem_comp.name "N1-deaza-adenosine-5'-monophosphate"
_chem_comp.type "RNA LINKING"
_chem_comp.pdbx_type ATOMN
_chem_comp.formula "C11 H15 N4 O7 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms 3-(5-O-phosphono-beta-D-ribofuranosyl)-3H-imidazo[4,5-b]pyridin-7-amine
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2009-07-01
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 346.233
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 1DP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3I2Q
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1DP O3P O3P O 0 1 N Y N N N N 41.119 19.805 60.235 -5.130 2.082 -1.237 O3P 1DP 1
1DP P P P 0 1 N N N N N N 41.322 20.381 58.754 -4.753 1.026 -0.081 P 1DP 2
1DP O1P O1P O 0 1 N N N N N N 39.971 20.409 58.136 -4.530 1.746 1.192 O1P 1DP 3
1DP O2P O2P O 0 1 N N N N N N 42.122 21.631 58.824 -5.960 -0.024 0.101 O2P 1DP 4
1DP "O5'" "O5'" O 0 1 N N N N N N 42.194 19.261 58.032 -3.412 0.236 -0.493 "O5'" 1DP 5
1DP "C5'" "C5'" C 0 1 N N N N N N 43.538 19.006 58.414 -2.761 -0.697 0.372 "C5'" 1DP 6
1DP "C4'" "C4'" C 0 1 N N R N N N 44.142 17.985 57.482 -1.523 -1.262 -0.327 "C4'" 1DP 7
1DP "O4'" "O4'" O 0 1 N N N N N N 43.444 16.726 57.650 -0.548 -0.222 -0.511 "O4'" 1DP 8
1DP "C1'" "C1'" C 0 1 N N R N N N 43.319 16.077 56.397 0.753 -0.835 -0.380 "C1'" 1DP 9
1DP N9 N9 N 0 1 Y N N N N N 41.902 16.049 56.050 1.766 0.170 -0.051 N9 1DP 10
1DP C4 C4 C 0 1 Y N N N N N 41.328 15.336 55.031 3.119 0.073 -0.292 C4 1DP 11
1DP N3 N3 N 0 1 Y N N N N N 41.945 14.517 54.165 3.888 -0.856 -0.842 N3 1DP 12
1DP C2 C2 C 0 1 Y N N N N N 41.069 14.009 53.307 5.192 -0.700 -0.956 C2 1DP 13
1DP C1 C1 C 0 1 Y N N N N N 39.747 14.212 53.227 5.823 0.445 -0.507 C1 1DP 14
1DP C6 C6 C 0 1 Y N N N N N 39.163 15.040 54.119 5.069 1.456 0.079 C6 1DP 15
1DP N6 N6 N 0 1 N N N N N N 37.848 15.241 54.046 5.671 2.621 0.543 N6 1DP 16
1DP C5 C5 C 0 1 Y N N N N N 39.980 15.641 55.073 3.681 1.266 0.190 C5 1DP 17
1DP N7 N7 N 0 1 Y N N N N N 39.706 16.523 56.103 2.667 2.014 0.690 N7 1DP 18
1DP C8 C8 C 0 1 Y N N N N N 40.876 16.731 56.653 1.543 1.375 0.545 C8 1DP 19
1DP "C2'" "C2'" C 0 1 N N R N N N 44.114 16.898 55.385 0.566 -1.831 0.793 "C2'" 1DP 20
1DP "O2'" "O2'" O 0 1 N N N N N N 45.446 16.438 55.348 1.511 -2.900 0.710 "O2'" 1DP 21
1DP "C3'" "C3'" C 0 1 N N S N N N 44.024 18.286 55.995 -0.874 -2.347 0.554 "C3'" 1DP 22
1DP "O3'" "O3'" O 0 1 N Y N N N N 45.097 19.091 55.536 -0.849 -3.600 -0.133 "O3'" 1DP 23
1DP HO3P HO3P H 0 0 N Y N N N N 41.079 18.856 60.204 -5.930 2.595 -1.055 HO3P 1DP 24
1DP HO2P HO2P H 0 0 N N N N N N 42.293 21.848 59.733 -6.162 -0.533 -0.696 HO2P 1DP 25
1DP "H5'" "H5'" H 0 1 N N N N N N 44.118 19.939 58.360 -2.461 -0.192 1.290 "H5'" 1DP 26
1DP "H5'A" "H5'A" H 0 0 N N N N N N 43.559 18.619 59.444 -3.446 -1.510 0.611 "H5'A" 1DP 27
1DP "H4'" "H4'" H 0 1 N N N N N N 45.208 17.978 57.753 -1.802 -1.683 -1.293 "H4'" 1DP 28
1DP "H1'" "H1'" H 0 1 N N N N N N 43.701 15.046 56.414 1.022 -1.364 -1.294 "H1'" 1DP 29
1DP H2 H2 H 0 1 N N N N N N 41.480 13.337 52.569 5.780 -1.484 -1.410 H2 1DP 30
1DP H1 H1 H 0 1 N N N N N N 39.160 13.723 52.464 6.893 0.553 -0.609 H1 1DP 31
1DP HN6 HN6 H 0 1 N N N N N N 37.466 15.291 54.969 6.630 2.738 0.460 HN6 1DP 32
1DP HN6A HN6A H 0 0 N N N N N N 37.668 16.098 53.564 5.131 3.317 0.950 HN6A 1DP 33
1DP H8 H8 H 0 1 N N N N N N 41.020 17.380 57.504 0.576 1.744 0.853 H8 1DP 34
1DP "H2'" "H2'" H 0 1 N N N N N N 43.750 16.848 54.348 0.642 -1.320 1.753 "H2'" 1DP 35
1DP "HO2'" "HO2'" H 0 0 N N N N N N 45.721 16.335 54.445 1.434 -3.549 1.422 "HO2'" 1DP 36
1DP "H3'" "H3'" H 0 1 N N N N N N 43.110 18.842 55.738 -1.407 -2.440 1.500 "H3'" 1DP 37
1DP "HO3'" "HO3'" H 0 0 N Y N N N N 44.985 19.271 54.610 -0.399 -4.306 0.352 "HO3'" 1DP 38
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1DP P O3P SING N N 1
1DP O3P HO3P SING N N 2
1DP "O5'" P SING N N 3
1DP O1P P DOUB N N 4
1DP P O2P SING N N 5
1DP O2P HO2P SING N N 6
1DP "O5'" "C5'" SING N N 7
1DP "C4'" "C5'" SING N N 8
1DP "C5'" "H5'" SING N N 9
1DP "C5'" "H5'A" SING N N 10
1DP "C3'" "C4'" SING N N 11
1DP "C4'" "O4'" SING N N 12
1DP "C4'" "H4'" SING N N 13
1DP "C1'" "O4'" SING N N 14
1DP "C2'" "C1'" SING N N 15
1DP N9 "C1'" SING N N 16
1DP "C1'" "H1'" SING N N 17
1DP C4 N9 SING Y N 18
1DP N9 C8 SING Y N 19
1DP N3 C4 DOUB Y N 20
1DP C4 C5 SING Y N 21
1DP C2 N3 SING Y N 22
1DP C1 C2 DOUB Y N 23
1DP C2 H2 SING N N 24
1DP C1 C6 SING Y N 25
1DP C1 H1 SING N N 26
1DP N6 C6 SING N N 27
1DP C6 C5 DOUB Y N 28
1DP N6 HN6 SING N N 29
1DP N6 HN6A SING N N 30
1DP C5 N7 SING Y N 31
1DP N7 C8 DOUB Y N 32
1DP C8 H8 SING N N 33
1DP "O2'" "C2'" SING N N 34
1DP "C2'" "C3'" SING N N 35
1DP "C2'" "H2'" SING N N 36
1DP "O2'" "HO2'" SING N N 37
1DP "O3'" "C3'" SING N N 38
1DP "C3'" "H3'" SING N N 39
1DP "O3'" "HO3'" SING N N 40
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1DP SMILES ACDLabs 10.04 O=P(O)(O)OCC3OC(n2cnc1c(N)ccnc12)C(O)C3O
1DP SMILES_CANONICAL CACTVS 3.341 Nc1ccnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
1DP SMILES CACTVS 3.341 Nc1ccnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
1DP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1cnc2c(c1N)ncn2[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
1DP SMILES "OpenEye OEToolkits" 1.5.0 c1cnc2c(c1N)ncn2C3C(C(C(O3)COP(=O)(O)O)O)O
1DP InChI InChI 1.03 InChI=1S/C11H15N4O7P/c12-5-1-2-13-10-7(5)14-4-15(10)11-9(17)8(16)6(22-11)3-21-23(18,19)20/h1-2,4,6,8-9,11,16-17H,3H2,(H2,12,13)(H2,18,19,20)/t6-,8-,9-,11-/m1/s1
1DP InChIKey InChI 1.03 MKNCBTMEOTYSIQ-PNHWDRBUSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1DP "SYSTEMATIC NAME" ACDLabs 10.04 3-(5-O-phosphono-beta-D-ribofuranosyl)-3H-imidazo[4,5-b]pyridin-7-amine
1DP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(7-aminoimidazo[5,4-b]pyridin-3-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1DP 'Create component' 2009-07-01 RCSB
1DP 'Modify aromatic_flag' 2011-06-04 RCSB
1DP 'Modify descriptor' 2011-06-04 RCSB
1DP 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 1DP
_pdbx_chem_comp_synonyms.name 3-(5-O-phosphono-beta-D-ribofuranosyl)-3H-imidazo[4,5-b]pyridin-7-amine
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 1DP
_pdbe_chem_comp_synonyms.name '3-(5-O-phosphono-beta-D-ribofuranosyl)-3H-imidazo[4,5-b]pyridin-7-amine'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
1DP O3P O 7.110 -6.615 1
1DP P P 7.571 -5.188 2
1DP O1P O 8.998 -5.649 3
1DP O2P O 6.144 -4.726 4
1DP "O5'" O 8.032 -3.760 5
1DP "C5'" C 7.027 -2.647 6
1DP "C4'" C 7.487 -1.220 7
1DP "O4'" O 6.604 -0.008 8
1DP "C1'" C 7.483 1.207 9
1DP N9 N 7.018 2.633 10
1DP C4 C 5.598 3.090 11
1DP N3 N 4.299 2.340 12
1DP C2 C 3.000 3.090 13
1DP C1 C 3.000 4.590 14
1DP C6 C 4.299 5.340 15
1DP N6 N 4.299 6.840 16
1DP C5 C 5.598 4.590 17
1DP N7 N 7.018 5.047 18
1DP C8 C 7.893 3.840 19
1DP "C2'" C 8.911 0.746 20
1DP "O2'" O 10.123 1.630 21
1DP "C3'" C 8.913 -0.754 22
1DP "O3'" O 10.129 -1.633 23
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
1DP P O3P SINGLE NONE 1
1DP "O5'" P SINGLE NONE 2
1DP O1P P DOUBLE NONE 3
1DP P O2P SINGLE NONE 4
1DP "O5'" "C5'" SINGLE NONE 5
1DP "C4'" "C5'" SINGLE BEGINWEDGE 6
1DP "C3'" "C4'" SINGLE NONE 7
1DP "C4'" "O4'" SINGLE NONE 8
1DP "C1'" "O4'" SINGLE NONE 9
1DP "C2'" "C1'" SINGLE NONE 10
1DP "C1'" N9 SINGLE BEGINWEDGE 11
1DP C4 N9 SINGLE NONE 12
1DP N9 C8 SINGLE NONE 13
1DP N3 C4 DOUBLE NONE 14
1DP C4 C5 SINGLE NONE 15
1DP C2 N3 SINGLE NONE 16
1DP C1 C2 DOUBLE NONE 17
1DP C1 C6 SINGLE NONE 18
1DP N6 C6 SINGLE NONE 19
1DP C6 C5 DOUBLE NONE 20
1DP C5 N7 SINGLE NONE 21
1DP N7 C8 DOUBLE NONE 22
1DP "C2'" "O2'" SINGLE BEGINDASH 23
1DP "C2'" "C3'" SINGLE NONE 24
1DP "C3'" "O3'" SINGLE BEGINDASH 25
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
1DP MurckoScaffold S1 scaffold 'c1cnc2c(c1)ncn2[C@H]1CCCO1' InChI=1S/C10H11N3O/c1-3-8-10(11-5-1)13(7-12-8)9-4-2-6-14-9/h1,3,5,7,9H,2,4,6H2/t9-/m1/s1 XFEBLUIBQNCGNG-SECBINFHSA-N
1DP imidazole F1 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
1DP phosphate F2 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
1DP pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
1DP ribose F4 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
1DP "C4'" S1 1
1DP "O4'" S1 1
1DP "C1'" S1 1
1DP N9 S1 1
1DP C4 S1 1
1DP N3 S1 1
1DP C2 S1 1
1DP C1 S1 1
1DP C6 S1 1
1DP C5 S1 1
1DP N7 S1 1
1DP C8 S1 1
1DP "C2'" S1 1
1DP "C3'" S1 1
1DP C4 F1 1
1DP C5 F1 1
1DP N7 F1 1
1DP C8 F1 1
1DP N9 F1 1
1DP O3P F2 1
1DP P F2 1
1DP O1P F2 1
1DP "O5'" F2 1
1DP O2P F2 1
1DP C4 F3 1
1DP C5 F3 1
1DP C6 F3 1
1DP C1 F3 1
1DP C2 F3 1
1DP N3 F3 1
1DP "C2'" F4 1
1DP "C3'" F4 1
1DP "C4'" F4 1
1DP "O4'" F4 1
1DP "C1'" F4 1
1DP "C5'" F4 1
1DP "O5'" F4 1
1DP "O3'" F4 1
1DP "O2'" F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 1DP
_pdbe_chem_comp_rdkit_properties.exactmw 346.068
_pdbe_chem_comp_rdkit_properties.amw 346.236
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 11
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23
_pdbe_chem_comp_rdkit_properties.NumAtoms 38
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.455
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 150.621
_pdbe_chem_comp_rdkit_properties.tpsa 173.180
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.067
_pdbe_chem_comp_rdkit_properties.CrippenMR 72.830
_pdbe_chem_comp_rdkit_properties.chi0v 11.488
_pdbe_chem_comp_rdkit_properties.chi1v 7.000
_pdbe_chem_comp_rdkit_properties.chi2v 2.819
_pdbe_chem_comp_rdkit_properties.chi3v 2.819
_pdbe_chem_comp_rdkit_properties.chi4v 1.796
_pdbe_chem_comp_rdkit_properties.chi0n 25.594
_pdbe_chem_comp_rdkit_properties.chi1n 12.567
_pdbe_chem_comp_rdkit_properties.chi2n 2.504
_pdbe_chem_comp_rdkit_properties.chi3n 2.504
_pdbe_chem_comp_rdkit_properties.chi4n 1.601
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.590
_pdbe_chem_comp_rdkit_properties.kappa1 6.045
_pdbe_chem_comp_rdkit_properties.kappa2 5.800
_pdbe_chem_comp_rdkit_properties.kappa3 3.078
_pdbe_chem_comp_rdkit_properties.Phi 1.525
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
1DP UniChem PDBe 1DP
1DP UniChem ZINC ZINC000058632995
1DP UniChem SureChEMBL SCHEMBL14928636
1DP UniChem PubChem 49866418
1DP UniChem Nikkaji J1.572.340H
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
1DP O3P 4.309 2.144 -2.144 ETKDGv3 1
1DP P 4.165 0.501 -1.765 ETKDGv3 2
1DP O1P 3.313 -0.183 -2.811 ETKDGv3 3
1DP O2P 5.705 -0.200 -1.761 ETKDGv3 4
1DP "O5'" 3.463 0.306 -0.223 ETKDGv3 5
1DP "C5'" 2.233 0.993 -0.204 ETKDGv3 6
1DP "C4'" 1.546 0.770 1.147 ETKDGv3 7
1DP "O4'" 0.339 1.498 1.192 ETKDGv3 8
1DP "C1'" -0.575 0.770 1.990 ETKDGv3 9
1DP N9 -1.852 0.652 1.286 ETKDGv3 10
1DP C4 -2.061 0.237 -0.050 ETKDGv3 11
1DP N3 -1.192 0.162 -1.012 ETKDGv3 12
1DP C2 -1.624 -0.372 -2.286 ETKDGv3 13
1DP C1 -2.894 -0.814 -2.452 ETKDGv3 14
1DP C6 -3.852 -0.756 -1.310 ETKDGv3 15
1DP N6 -5.181 -1.267 -1.429 ETKDGv3 16
1DP C5 -3.400 -0.224 -0.172 ETKDGv3 17
1DP N7 -4.032 -0.126 1.097 ETKDGv3 18
1DP C8 -3.125 0.365 1.901 ETKDGv3 19
1DP "C2'" 0.005 -0.621 2.304 ETKDGv3 20
1DP "O2'" 0.349 -0.742 3.665 ETKDGv3 21
1DP "C3'" 1.209 -0.702 1.391 ETKDGv3 22
1DP "O3'" 2.275 -1.448 1.932 ETKDGv3 23
1DP HO3P 4.885 2.517 -1.429 ETKDGv3 24
1DP HO2P 5.559 -1.129 -1.450 ETKDGv3 25
1DP "H5'" 1.558 0.636 -1.014 ETKDGv3 26
1DP "H5'A" 2.401 2.087 -0.325 ETKDGv3 27
1DP "H4'" 2.211 1.160 1.950 ETKDGv3 28
1DP "H1'" -0.747 1.340 2.929 ETKDGv3 29
1DP H2 -0.923 -0.423 -3.108 ETKDGv3 30
1DP H1 -3.207 -1.220 -3.405 ETKDGv3 31
1DP HN6 -5.505 -1.687 -2.328 ETKDGv3 32
1DP HN6A -5.848 -1.229 -0.626 ETKDGv3 33
1DP H8 -3.315 0.521 2.955 ETKDGv3 34
1DP "H2'" -0.713 -1.433 2.055 ETKDGv3 35
1DP "HO2'" 0.933 0.024 3.909 ETKDGv3 36
1DP "H3'" 0.893 -1.181 0.437 ETKDGv3 37
1DP "HO3'" 2.693 -0.926 2.664 ETKDGv3 38
#