data_1GE
#
_chem_comp.id 1GE
_chem_comp.name
"2'-[(6R,6aR,11bR)-2-carbamimidoyl-6,6a,7,11b-tetrahydro-5H-indeno[2,1-c]quinolin-6-yl]-5'-hydroxy-4'-methoxybiphenyl-4-carboxylic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C31 H27 N3 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-01-25
_chem_comp.pdbx_modified_date 2013-03-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 505.564
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 1GE
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4ISH
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1GE C1 C1 C 0 1 Y N N N N N 9.449 34.227 28.598 4.568 0.400 -0.500 C1 1GE 1
1GE C2 C2 C 0 1 Y N N N N N 9.813 33.870 27.280 4.404 -0.256 -1.722 C2 1GE 2
1GE C3 C3 C 0 1 Y N N N N N 9.248 34.545 26.190 3.137 -0.523 -2.186 C3 1GE 3
1GE C4 C4 C 0 1 Y N N N N N 8.318 35.590 26.391 2.021 -0.141 -1.442 C4 1GE 4
1GE C5 C5 C 0 1 Y N N N N N 7.946 35.953 27.713 2.175 0.508 -0.227 C5 1GE 5
1GE C6 C6 C 0 1 Y N N N N N 8.535 35.281 28.797 3.450 0.779 0.241 C6 1GE 6
1GE C10 C10 C 0 1 N N N N N N 9.968 33.493 29.761 5.926 0.687 0.010 C10 1GE 7
1GE N11 N11 N 0 1 N N N N N N 10.508 32.276 29.651 6.077 1.295 1.153 N11 1GE 8
1GE N12 N12 N 0 1 N N N N N N 9.882 34.084 30.984 7.031 0.312 -0.723 N12 1GE 9
1GE N13 N13 N 0 1 N N N N N N 7.736 36.177 25.293 0.753 -0.417 -1.941 N13 1GE 10
1GE C14 C14 C 0 1 N N R N N N 6.915 37.382 25.400 -0.418 -0.339 -1.083 C14 1GE 11
1GE C15 C15 C 0 1 N N R N N N 6.101 37.507 26.718 -0.339 0.791 -0.092 C15 1GE 12
1GE C16 C16 C 0 1 N N R N N N 6.851 36.986 27.928 1.007 0.934 0.617 C16 1GE 13
1GE C17 C17 C 0 1 N N N N N N 5.310 38.749 27.059 -0.526 2.162 -0.776 C17 1GE 14
1GE C18 C18 C 0 1 Y N N N N N 6.380 39.319 27.945 0.248 3.119 0.090 C18 1GE 15
1GE C19 C19 C 0 1 Y N N N N N 7.253 38.341 28.464 1.131 2.411 0.900 C19 1GE 16
1GE C24 C24 C 0 1 Y N N N N N 6.560 40.685 28.254 0.168 4.501 0.149 C24 1GE 17
1GE C25 C25 C 0 1 Y N N N N N 7.624 41.046 29.105 1.004 5.144 1.052 C25 1GE 18
1GE C26 C26 C 0 1 Y N N N N N 8.496 40.072 29.636 1.877 4.442 1.857 C26 1GE 19
1GE C27 C27 C 0 1 Y N N N N N 8.317 38.709 29.316 1.962 3.057 1.800 C27 1GE 20
1GE C32 C32 C 0 1 Y N N N N N 5.919 37.504 24.252 -0.556 -1.637 -0.330 C32 1GE 21
1GE C34 C34 C 0 1 Y N N N N N 5.787 38.735 23.542 -1.788 -2.001 0.212 C34 1GE 22
1GE C35 C35 C 0 1 Y N N N N N 4.764 38.810 22.589 -1.914 -3.203 0.908 C35 1GE 23
1GE C36 C36 C 0 1 Y N N N N N 3.937 37.712 22.286 -0.816 -4.030 1.059 C36 1GE 24
1GE C37 C37 C 0 1 Y N N N N N 4.085 36.462 22.930 0.413 -3.661 0.515 C37 1GE 25
1GE C38 C38 C 0 1 Y N N N N N 5.088 36.393 23.935 0.535 -2.468 -0.181 C38 1GE 26
1GE C41 C41 C 0 1 Y N N N N N 6.697 39.905 23.667 -2.962 -1.112 0.049 C41 1GE 27
1GE C42 C42 C 0 1 Y N N N N N 6.276 41.167 24.124 -3.382 -0.738 -1.229 C42 1GE 28
1GE C43 C43 C 0 1 Y N N N N N 7.178 42.267 24.180 -4.472 0.087 -1.382 C43 1GE 29
1GE C44 C44 C 0 1 Y N N N N N 8.534 42.131 23.780 -5.160 0.552 -0.257 C44 1GE 30
1GE C45 C45 C 0 1 Y N N N N N 8.953 40.860 23.333 -4.739 0.177 1.022 C45 1GE 31
1GE C46 C46 C 0 1 Y N N N N N 8.042 39.771 23.285 -3.651 -0.653 1.172 C46 1GE 32
1GE C51 C51 C 0 1 N N N N N N 9.480 43.250 23.841 -6.328 1.438 -0.420 C51 1GE 33
1GE O52 O52 O 0 1 N N N N N N 9.062 44.298 24.589 -6.991 1.885 0.665 O52 1GE 34
1GE O53 O53 O 0 1 N N N N N N 10.535 43.199 23.277 -6.693 1.764 -1.532 O53 1GE 35
1GE O54 O54 O 0 1 N N N N N N 3.267 35.426 22.501 1.492 -4.474 0.664 O54 1GE 36
1GE C55 C55 C 0 1 N N N N N N 3.397 34.184 23.171 2.721 -4.034 0.082 C55 1GE 37
1GE O59 O59 O 0 1 N N N N N N 2.975 37.864 21.309 -0.935 -5.202 1.737 O59 1GE 38
1GE H1 H1 H 0 1 N N N N N N 10.527 33.077 27.113 5.268 -0.552 -2.299 H1 1GE 39
1GE H2 H2 H 0 1 N N N N N N 9.526 34.264 25.185 3.005 -1.030 -3.131 H2 1GE 40
1GE H3 H3 H 0 1 N N N N N N 8.282 35.578 29.804 3.578 1.283 1.187 H3 1GE 41
1GE H4 H4 H 0 1 N N N N N N 10.806 31.917 30.536 6.968 1.483 1.488 H4 1GE 42
1GE H5 H5 H 0 1 N N N N N N 10.222 33.607 31.795 6.918 -0.140 -1.574 H5 1GE 43
1GE H6 H6 H 0 1 N N N N N N 9.479 34.995 31.072 7.922 0.501 -0.388 H6 1GE 44
1GE H7 H7 H 0 1 N N N N N N 7.154 35.478 24.878 0.649 -0.664 -2.873 H7 1GE 45
1GE H8 H8 H 0 1 N N N N N N 7.582 38.255 25.350 -1.302 -0.200 -1.705 H8 1GE 46
1GE H9 H9 H 0 1 N N N N N N 5.314 36.751 26.580 -1.114 0.661 0.663 H9 1GE 47
1GE H10 H10 H 0 1 N N N N N N 6.114 36.554 28.621 0.997 0.369 1.549 H10 1GE 48
1GE H11 H11 H 0 1 N N N N N N 5.093 39.378 26.183 -0.115 2.144 -1.785 H11 1GE 49
1GE H12 H12 H 0 1 N N N N N N 4.374 38.532 27.595 -1.581 2.436 -0.798 H12 1GE 50
1GE H13 H13 H 0 1 N N N N N N 5.898 41.435 27.848 -0.515 5.054 -0.479 H13 1GE 51
1GE H14 H14 H 0 1 N N N N N N 7.774 42.086 29.355 0.971 6.221 1.127 H14 1GE 52
1GE H15 H15 H 0 1 N N N N N N 9.303 40.370 30.289 2.510 4.982 2.546 H15 1GE 53
1GE H16 H16 H 0 1 N N N N N N 8.983 37.959 29.717 2.646 2.508 2.430 H16 1GE 54
1GE H17 H17 H 0 1 N N N N N N 4.604 39.743 22.068 -2.867 -3.488 1.329 H17 1GE 55
1GE H18 H18 H 0 1 N N N N N N 5.224 35.468 24.475 1.489 -2.185 -0.601 H18 1GE 56
1GE H19 H19 H 0 1 N N N N N N 5.252 41.304 24.438 -2.850 -1.097 -2.098 H19 1GE 57
1GE H20 H20 H 0 1 N N N N N N 6.824 43.224 24.534 -4.796 0.377 -2.371 H20 1GE 58
1GE H21 H21 H 0 1 N N N N N N 9.977 40.713 23.024 -5.269 0.535 1.892 H21 1GE 59
1GE H22 H22 H 0 1 N N N N N N 8.395 38.809 22.944 -3.326 -0.943 2.160 H22 1GE 60
1GE H23 H23 H 0 1 N N N N N N 9.731 44.972 24.592 -7.750 2.463 0.508 H23 1GE 61
1GE H24 H24 H 0 1 N N N N N N 2.696 33.457 22.735 3.010 -3.080 0.522 H24 1GE 62
1GE H25 H25 H 0 1 N N N N N N 4.427 33.813 23.059 3.499 -4.773 0.274 H25 1GE 63
1GE H26 H26 H 0 1 N N N N N N 3.169 34.318 24.239 2.591 -3.914 -0.994 H26 1GE 64
1GE H27 H27 H 0 1 N N N N N N 2.494 37.051 21.209 -1.178 -5.955 1.182 H27 1GE 65
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1GE O59 C36 SING N N 1
1GE C36 C35 DOUB Y N 2
1GE C36 C37 SING Y N 3
1GE O54 C37 SING N N 4
1GE O54 C55 SING N N 5
1GE C35 C34 SING Y N 6
1GE C37 C38 DOUB Y N 7
1GE O53 C51 DOUB N N 8
1GE C46 C45 DOUB Y N 9
1GE C46 C41 SING Y N 10
1GE C45 C44 SING Y N 11
1GE C34 C41 SING N N 12
1GE C34 C32 DOUB Y N 13
1GE C41 C42 DOUB Y N 14
1GE C44 C51 SING N N 15
1GE C44 C43 DOUB Y N 16
1GE C51 O52 SING N N 17
1GE C38 C32 SING Y N 18
1GE C42 C43 SING Y N 19
1GE C32 C14 SING N N 20
1GE N13 C14 SING N N 21
1GE N13 C4 SING N N 22
1GE C14 C15 SING N N 23
1GE C3 C4 DOUB Y N 24
1GE C3 C2 SING Y N 25
1GE C4 C5 SING Y N 26
1GE C15 C17 SING N N 27
1GE C15 C16 SING N N 28
1GE C17 C18 SING N N 29
1GE C2 C1 DOUB Y N 30
1GE C5 C16 SING N N 31
1GE C5 C6 DOUB Y N 32
1GE C16 C19 SING N N 33
1GE C18 C24 DOUB Y N 34
1GE C18 C19 SING Y N 35
1GE C24 C25 SING Y N 36
1GE C19 C27 DOUB Y N 37
1GE C1 C6 SING Y N 38
1GE C1 C10 SING N N 39
1GE C25 C26 DOUB Y N 40
1GE C27 C26 SING Y N 41
1GE N11 C10 DOUB N N 42
1GE C10 N12 SING N N 43
1GE C2 H1 SING N N 44
1GE C3 H2 SING N N 45
1GE C6 H3 SING N N 46
1GE N11 H4 SING N N 47
1GE N12 H5 SING N N 48
1GE N12 H6 SING N N 49
1GE N13 H7 SING N N 50
1GE C14 H8 SING N N 51
1GE C15 H9 SING N N 52
1GE C16 H10 SING N N 53
1GE C17 H11 SING N N 54
1GE C17 H12 SING N N 55
1GE C24 H13 SING N N 56
1GE C25 H14 SING N N 57
1GE C26 H15 SING N N 58
1GE C27 H16 SING N N 59
1GE C35 H17 SING N N 60
1GE C38 H18 SING N N 61
1GE C42 H19 SING N N 62
1GE C43 H20 SING N N 63
1GE C45 H21 SING N N 64
1GE C46 H22 SING N N 65
1GE O52 H23 SING N N 66
1GE C55 H24 SING N N 67
1GE C55 H25 SING N N 68
1GE C55 H26 SING N N 69
1GE O59 H27 SING N N 70
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1GE SMILES ACDLabs 12.01 O=C(O)c1ccc(cc1)c2cc(O)c(OC)cc2C6Nc3ccc(C(=[N@H])N)cc3C5c4ccccc4CC56
1GE InChI InChI 1.03 InChI=1S/C31H27N3O4/c1-38-27-15-22(21(14-26(27)35)16-6-8-17(9-7-16)31(36)37)29-24-12-18-4-2-3-5-20(18)28(24)23-13-19(30(32)33)10-11-25(23)34-29/h2-11,13-15,24,28-29,34-35H,12H2,1H3,(H3,32,33)(H,36,37)/t24-,28-,29+/m1/s1
1GE InChIKey InChI 1.03 UZOHOGNUODEPEP-USOMCTOXSA-N
1GE SMILES_CANONICAL CACTVS 3.370 COc1cc([C@@H]2Nc3ccc(cc3[C@@H]4[C@H]2Cc5ccccc45)C(N)=N)c(cc1O)c6ccc(cc6)C(O)=O
1GE SMILES CACTVS 3.370 COc1cc([CH]2Nc3ccc(cc3[CH]4[CH]2Cc5ccccc45)C(N)=N)c(cc1O)c6ccc(cc6)C(O)=O
1GE SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C(\c1ccc2c(c1)[C@H]3c4ccccc4C[C@H]3[C@@H](N2)c5cc(c(cc5c6ccc(cc6)C(=O)O)O)OC)/N"
1GE SMILES "OpenEye OEToolkits" 1.7.6 COc1cc(c(cc1O)c2ccc(cc2)C(=O)O)C3C4Cc5ccccc5C4c6cc(ccc6N3)C(=N)N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1GE "SYSTEMATIC NAME" ACDLabs 12.01 "2'-[(6R,6aR,11bR)-2-carbamimidoyl-6,6a,7,11b-tetrahydro-5H-indeno[2,1-c]quinolin-6-yl]-5'-hydroxy-4'-methoxybiphenyl-4-carboxylic acid"
1GE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-[2-[(6R,6aR,11bR)-2-carbamimidoyl-6,6a,7,11b-tetrahydro-5H-indeno[2,1-c]quinolin-6-yl]-4-methoxy-5-oxidanyl-phenyl]benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1GE 'Create component' 2013-01-25 RCSB
1GE 'Modify formula' 2013-02-20 RCSB
1GE 'Modify name' 2013-02-20 RCSB
1GE 'Initial release' 2013-03-20 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
1GE C1 C 6.402 -3.039 1
1GE C2 C 6.402 -1.477 2
1GE C3 C 7.761 -0.706 3
1GE C4 C 9.102 -1.508 4
1GE C5 C 9.102 -3.008 5
1GE C6 C 7.761 -3.810 6
1GE C10 C 5.106 -3.794 7
1GE N11 N 3.804 -3.049 8
1GE N12 N 5.111 -5.294 9
1GE N13 N 10.401 -0.758 10
1GE C14 C 11.700 -1.508 11
1GE C15 C 11.700 -3.008 12
1GE C16 C 10.401 -3.758 13
1GE C17 C 12.805 -4.008 14
1GE C18 C 12.197 -5.370 15
1GE C19 C 10.714 -5.215 16
1GE C24 C 12.852 -6.779 17
1GE C25 C 11.950 -8.043 18
1GE C26 C 10.405 -7.882 19
1GE C27 C 9.784 -6.459 20
1GE C32 C 12.999 -0.758 21
1GE C34 C 12.999 0.742 22
1GE C35 C 14.298 1.492 23
1GE C36 C 15.597 0.742 24
1GE C37 C 15.597 -0.758 25
1GE C38 C 14.298 -1.508 26
1GE C41 C 12.249 2.041 27
1GE C42 C 12.999 3.340 28
1GE C43 C 12.249 4.639 29
1GE C44 C 10.749 4.639 30
1GE C45 C 9.999 3.340 31
1GE C46 C 10.749 2.041 32
1GE C51 C 9.999 5.938 33
1GE O52 O 8.499 5.938 34
1GE O53 O 10.749 7.237 35
1GE O54 O 16.896 -1.508 36
1GE C55 C 18.195 -0.758 37
1GE O59 O 16.896 1.492 38
1GE H4 H 2.507 -3.804 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
1GE O59 C36 SINGLE NONE 1
1GE C36 C35 DOUBLE NONE 2
1GE C36 C37 SINGLE NONE 3
1GE O54 C37 SINGLE NONE 4
1GE O54 C55 SINGLE NONE 5
1GE C35 C34 SINGLE NONE 6
1GE C37 C38 DOUBLE NONE 7
1GE O53 C51 DOUBLE NONE 8
1GE C46 C45 DOUBLE NONE 9
1GE C46 C41 SINGLE NONE 10
1GE C45 C44 SINGLE NONE 11
1GE C34 C41 SINGLE NONE 12
1GE C34 C32 DOUBLE NONE 13
1GE C41 C42 DOUBLE NONE 14
1GE C44 C51 SINGLE NONE 15
1GE C44 C43 DOUBLE NONE 16
1GE C51 O52 SINGLE NONE 17
1GE C38 C32 SINGLE NONE 18
1GE C42 C43 SINGLE NONE 19
1GE C14 C32 SINGLE BEGINWEDGE 20
1GE N13 C14 SINGLE NONE 21
1GE N13 C4 SINGLE NONE 22
1GE C14 C15 SINGLE NONE 23
1GE C3 C4 DOUBLE NONE 24
1GE C3 C2 SINGLE NONE 25
1GE C4 C5 SINGLE NONE 26
1GE C15 C17 SINGLE NONE 27
1GE C15 C16 SINGLE NONE 28
1GE C17 C18 SINGLE NONE 29
1GE C2 C1 DOUBLE NONE 30
1GE C5 C16 SINGLE NONE 31
1GE C5 C6 DOUBLE NONE 32
1GE C16 C19 SINGLE NONE 33
1GE C18 C24 SINGLE NONE 34
1GE C18 C19 DOUBLE NONE 35
1GE C24 C25 DOUBLE NONE 36
1GE C19 C27 SINGLE NONE 37
1GE C1 C6 SINGLE NONE 38
1GE C1 C10 SINGLE ENDDOWNRIGHT 39
1GE C25 C26 SINGLE NONE 40
1GE C27 C26 DOUBLE NONE 41
1GE N11 C10 DOUBLE NONE 42
1GE C10 N12 SINGLE ENDDOWNRIGHT 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
1GE MurckoScaffold S1 scaffold 'c1ccc(-c2ccccc2[C@@H]2Nc3ccccc3[C@H]3c4ccccc4C[C@H]32)cc1' InChI=1S/C28H23N/c1-2-10-19(11-3-1)21-13-6-7-15-23(21)28-25-18-20-12-4-5-14-22(20)27(25)24-16-8-9-17-26(24)29-28/h1-17,25,27-29H,18H2/t25-,27-,28+/m1/s1 JBMYDEGEGBEWNO-KZQOYIJHSA-N
1GE phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
1GE C1 S1 1
1GE C2 S1 1
1GE C3 S1 1
1GE C4 S1 1
1GE C5 S1 1
1GE C6 S1 1
1GE N13 S1 1
1GE C14 S1 1
1GE C15 S1 1
1GE C16 S1 1
1GE C17 S1 1
1GE C18 S1 1
1GE C19 S1 1
1GE C24 S1 1
1GE C25 S1 1
1GE C26 S1 1
1GE C27 S1 1
1GE C32 S1 1
1GE C34 S1 1
1GE C35 S1 1
1GE C36 S1 1
1GE C37 S1 1
1GE C38 S1 1
1GE C41 S1 1
1GE C42 S1 1
1GE C43 S1 1
1GE C44 S1 1
1GE C45 S1 1
1GE C46 S1 1
1GE C1 F1 1
1GE C2 F1 1
1GE C3 F1 1
1GE C4 F1 1
1GE C5 F1 1
1GE C6 F1 1
1GE C18 F1 2
1GE C24 F1 2
1GE C25 F1 2
1GE C26 F1 2
1GE C27 F1 2
1GE C19 F1 2
1GE C32 F1 3
1GE C34 F1 3
1GE C35 F1 3
1GE C36 F1 3
1GE C37 F1 3
1GE C38 F1 3
1GE C41 F1 4
1GE C46 F1 4
1GE C45 F1 4
1GE C44 F1 4
1GE C43 F1 4
1GE C42 F1 4
#
_pdbe_chem_comp_rdkit_properties.comp_id 1GE
_pdbe_chem_comp_rdkit_properties.exactmw 505.200
_pdbe_chem_comp_rdkit_properties.amw 505.574
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 38
_pdbe_chem_comp_rdkit_properties.NumAtoms 65
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.161
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 257.924
_pdbe_chem_comp_rdkit_properties.tpsa 128.660
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.507
_pdbe_chem_comp_rdkit_properties.CrippenMR 141.393
_pdbe_chem_comp_rdkit_properties.chi0v 18.475
_pdbe_chem_comp_rdkit_properties.chi1v 10.415
_pdbe_chem_comp_rdkit_properties.chi2v 5.516
_pdbe_chem_comp_rdkit_properties.chi3v 5.516
_pdbe_chem_comp_rdkit_properties.chi4v 3.901
_pdbe_chem_comp_rdkit_properties.chi0n 45.475
_pdbe_chem_comp_rdkit_properties.chi1n 23.520
_pdbe_chem_comp_rdkit_properties.chi2n 5.516
_pdbe_chem_comp_rdkit_properties.chi3n 5.516
_pdbe_chem_comp_rdkit_properties.chi4n 3.901
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.780
_pdbe_chem_comp_rdkit_properties.kappa1 8.108
_pdbe_chem_comp_rdkit_properties.kappa2 8.955
_pdbe_chem_comp_rdkit_properties.kappa3 3.748
_pdbe_chem_comp_rdkit_properties.Phi 1.911
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
1GE UniChem ChEMBL CHEMBL2409314
1GE UniChem PDBe 1GE
1GE UniChem ZINC ZINC000014210440
1GE UniChem fdasrs XD269G3O31
1GE UniChem SureChEMBL SCHEMBL4940602
1GE UniChem BindingDb 50437438
1GE UniChem PubChem 69249482
1GE UniChem 'PubChem TPHARMA' 163626521
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
1GE C1 -1.879 -2.161 2.067 ETKDGv3 1
1GE C2 -1.608 -1.291 3.055 ETKDGv3 2
1GE C3 -1.053 0.038 2.749 ETKDGv3 3
1GE C4 -0.828 0.408 1.478 ETKDGv3 4
1GE C5 -1.202 -0.503 0.367 ETKDGv3 5
1GE C6 -1.642 -1.742 0.661 ETKDGv3 6
1GE C10 -2.393 -3.520 2.371 ETKDGv3 7
1GE N11 -2.134 -4.065 3.519 ETKDGv3 8
1GE N12 -3.178 -4.237 1.411 ETKDGv3 9
1GE N13 -0.116 1.621 1.208 ETKDGv3 10
1GE C14 0.204 2.081 -0.141 ETKDGv3 11
1GE C15 -0.685 1.437 -1.236 ETKDGv3 12
1GE C16 -1.035 -0.066 -1.079 ETKDGv3 13
1GE C17 -2.045 2.148 -1.390 ETKDGv3 14
1GE C18 -2.908 1.068 -1.917 ETKDGv3 15
1GE C19 -2.354 -0.125 -1.787 ETKDGv3 16
1GE C24 -4.220 1.236 -2.571 ETKDGv3 17
1GE C25 -4.842 0.153 -3.062 ETKDGv3 18
1GE C26 -4.206 -1.186 -2.956 ETKDGv3 19
1GE C27 -3.014 -1.322 -2.354 ETKDGv3 20
1GE C32 1.696 2.004 -0.483 ETKDGv3 21
1GE C34 2.552 1.003 -0.131 ETKDGv3 22
1GE C35 3.958 1.038 -0.599 ETKDGv3 23
1GE C36 4.403 2.028 -1.377 ETKDGv3 24
1GE C37 3.488 3.113 -1.789 ETKDGv3 25
1GE C38 2.211 3.092 -1.364 ETKDGv3 26
1GE C41 2.188 -0.154 0.704 ETKDGv3 27
1GE C42 2.281 -0.083 2.042 ETKDGv3 28
1GE C43 2.003 -1.273 2.872 ETKDGv3 29
1GE C44 1.700 -2.451 2.295 ETKDGv3 30
1GE C45 1.682 -2.544 0.812 ETKDGv3 31
1GE C46 1.922 -1.461 0.064 ETKDGv3 32
1GE C51 1.378 -3.637 3.117 ETKDGv3 33
1GE O52 1.354 -3.548 4.507 ETKDGv3 34
1GE O53 1.112 -4.738 2.565 ETKDGv3 35
1GE O54 3.989 4.130 -2.620 ETKDGv3 36
1GE C55 3.231 5.236 -3.103 ETKDGv3 37
1GE O59 5.734 2.020 -1.792 ETKDGv3 38
1GE H1 -1.768 -1.556 4.093 ETKDGv3 39
1GE H2 -0.767 0.686 3.568 ETKDGv3 40
1GE H3 -1.812 -2.452 -0.133 ETKDGv3 41
1GE H4 -2.480 -5.018 3.768 ETKDGv3 42
1GE H5 -3.480 -5.219 1.599 ETKDGv3 43
1GE H6 -3.533 -3.776 0.545 ETKDGv3 44
1GE H7 0.232 2.198 2.008 ETKDGv3 45
1GE H8 -0.046 3.166 -0.141 ETKDGv3 46
1GE H9 -0.163 1.550 -2.216 ETKDGv3 47
1GE H10 -0.286 -0.701 -1.596 ETKDGv3 48
1GE H11 -2.443 2.489 -0.410 ETKDGv3 49
1GE H12 -1.980 2.998 -2.104 ETKDGv3 50
1GE H13 -4.670 2.217 -2.657 ETKDGv3 51
1GE H14 -5.804 0.254 -3.547 ETKDGv3 52
1GE H15 -4.702 -2.050 -3.379 ETKDGv3 53
1GE H16 -2.538 -2.292 -2.308 ETKDGv3 54
1GE H17 4.638 0.246 -0.307 ETKDGv3 55
1GE H18 1.527 3.873 -1.669 ETKDGv3 56
1GE H19 2.544 0.850 2.527 ETKDGv3 57
1GE H20 2.033 -1.169 3.949 ETKDGv3 58
1GE H21 1.475 -3.488 0.325 ETKDGv3 59
1GE H22 1.922 -1.544 -1.016 ETKDGv3 60
1GE H23 1.125 -4.354 5.076 ETKDGv3 61
1GE H24 2.383 4.877 -3.723 ETKDGv3 62
1GE H25 3.885 5.875 -3.731 ETKDGv3 63
1GE H26 2.855 5.843 -2.252 ETKDGv3 64
1GE H27 6.113 2.751 -2.382 ETKDGv3 65
#