data_1KY
#
_chem_comp.id 1KY
_chem_comp.name
6-({(1S,5R)-3-[2-(3,4-dimethoxyphenoxy)ethyl]-2-oxo-3,9-diazabicyclo[3.3.1]non-9-yl}sulfonyl)-1,3-benzothiazol-2(3H)-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H27 N3 O7 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-03-13
_chem_comp.pdbx_modified_date 2013-08-23
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 533.617
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 1KY
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4JFL
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1KY C C C 0 1 N N N N N N 11.291 -14.279 -17.528 -0.893 1.779 1.073 C 1KY 1
1KY N N N 0 1 N N N N N N 9.130 -13.832 -18.061 0.963 0.729 -0.041 N 1KY 2
1KY O O O 0 1 N N N N N N 12.415 -13.847 -17.291 -1.727 1.778 1.953 O 1KY 3
1KY CA CA C 0 1 N N S N N N 10.172 -13.593 -17.054 0.406 1.038 1.294 CA 1KY 4
1KY CB CB C 0 1 N N N N N N 9.781 -14.085 -15.684 1.383 2.031 1.955 CB 1KY 5
1KY CAA CAA C 0 1 N N N N N N 18.991 -13.240 -17.835 -8.575 -1.890 -2.165 CAA 1KY 6
1KY CAB CAB C 0 1 N N N N N N 16.925 -10.400 -20.967 -5.704 -2.549 2.606 CAB 1KY 7
1KY OAD OAD O 0 1 N N N N N N 4.221 -14.107 -24.698 9.212 -1.035 -0.123 OAD 1KY 8
1KY OAE OAE O 0 1 N N N N N N 8.245 -11.369 -17.621 0.693 -1.691 0.357 OAE 1KY 9
1KY OAF OAF O 0 1 N N N N N N 6.600 -13.254 -17.277 1.369 -0.847 -1.897 OAF 1KY 10
1KY CAG CAG C 0 1 Y N N N N N 15.392 -14.656 -19.274 -5.528 0.644 -1.171 CAG 1KY 11
1KY CAH CAH C 0 1 Y N N N N N 16.665 -14.228 -18.895 -6.555 -0.226 -1.486 CAH 1KY 12
1KY CAI CAI C 0 1 Y N N N N N 7.951 -11.986 -20.803 3.467 -1.458 1.216 CAI 1KY 13
1KY CAJ CAJ C 0 1 Y N N N N N 7.496 -12.056 -22.114 4.787 -1.609 1.569 CAJ 1KY 14
1KY CAK CAK C 0 1 Y N N N N N 14.844 -12.416 -19.901 -5.135 -0.553 0.875 CAK 1KY 15
1KY CAL CAL C 0 1 Y N N N N N 6.239 -13.487 -20.233 4.111 -0.651 -0.938 CAL 1KY 16
1KY CAM CAM C 0 1 N N N N N N 9.674 -15.551 -15.742 1.422 3.296 1.090 CAM 1KY 17
1KY CAN CAN C 0 1 N N N N N N 12.924 -15.526 -20.205 -3.533 2.382 -0.623 CAN 1KY 18
1KY CAO CAO C 0 1 N N N N N N 8.490 -15.806 -16.662 1.946 2.955 -0.305 CAO 1KY 19
1KY CAQ CAQ C 0 1 N N N N N N 12.465 -15.990 -18.801 -2.373 3.238 -0.109 CAQ 1KY 20
1KY CAR CAR C 0 1 N N N N N N 9.919 -16.013 -18.702 -0.318 2.410 -1.253 CAR 1KY 21
1KY NAS NAS N 0 1 N N N N N N 5.914 -12.974 -23.681 7.180 -1.377 0.864 NAS 1KY 22
1KY OAT OAT O 0 1 N N N N N N 18.238 -12.369 -18.678 -7.891 -2.114 -0.931 OAT 1KY 23
1KY OAU OAU O 0 1 N N N N N N 16.508 -10.690 -19.628 -6.485 -2.434 1.415 OAU 1KY 24
1KY OAV OAV O 0 1 N N N N N N 13.202 -14.134 -20.159 -3.806 1.339 0.315 OAV 1KY 25
1KY SAW SAW S 0 1 N N N N N N 4.594 -14.360 -22.234 6.948 -0.499 -1.462 SAW 1KY 26
1KY CAY CAY C 0 1 Y N N N N N 14.467 -13.752 -19.782 -4.817 0.482 0.008 CAY 1KY 27
1KY CAZ CAZ C 0 1 Y N N N N N 7.300 -12.714 -19.825 3.118 -0.982 -0.037 CAZ 1KY 28
1KY CBA CBA C 0 1 Y N N N N N 17.021 -12.888 -19.019 -6.880 -1.258 -0.620 CBA 1KY 29
1KY CBB CBB C 0 1 Y N N N N N 16.107 -11.988 -19.526 -6.171 -1.419 0.566 CBB 1KY 30
1KY CBC CBC C 0 1 N N N N N N 4.872 -13.808 -23.698 7.995 -1.015 -0.131 CBC 1KY 31
1KY CBD CBD C 0 1 Y N N N N N 6.455 -12.815 -22.454 5.813 -1.285 0.668 CBD 1KY 32
1KY CBE CBE C 0 1 Y N N N N N 5.833 -13.530 -21.503 5.441 -0.807 -0.589 CBE 1KY 33
1KY CBF CBF C 0 1 N N R N N N 8.770 -15.249 -18.058 1.081 1.879 -0.957 CBF 1KY 34
1KY NBH NBH N 0 1 N N N N N N 11.194 -15.361 -18.337 -1.152 2.429 -0.062 NBH 1KY 35
1KY SBJ SBJ S 0 1 N N N N N N 7.784 -12.737 -18.089 1.422 -0.801 -0.477 SBJ 1KY 36
1KY HA HA H 0 1 N N N N N N 10.381 -12.515 -16.996 0.263 0.138 1.892 HA 1KY 37
1KY HB HB H 0 1 N N N N N N 10.548 -13.795 -14.950 1.035 2.280 2.957 HB 1KY 38
1KY HBA HBA H 0 1 N N N N N N 8.813 -13.651 -15.394 2.378 1.589 2.009 HBA 1KY 39
1KY HAA HAA H 0 1 N N N N N N 19.957 -12.773 -17.594 -9.024 -0.897 -2.157 HAA 1KY 40
1KY HAAA HAAA H 0 0 N N N N N N 18.431 -13.426 -16.906 -7.867 -1.961 -2.991 HAAA 1KY 41
1KY HAAB HAAB H 0 0 N N N N N N 19.165 -14.194 -18.355 -9.355 -2.640 -2.290 HAAB 1KY 42
1KY HAB HAB H 0 1 N N N N N N 17.245 -9.350 -21.033 -4.658 -2.701 2.342 HAB 1KY 43
1KY HABA HABA H 0 0 N N N N N N 17.764 -11.057 -21.240 -5.801 -1.636 3.194 HABA 1KY 44
1KY HABB HABB H 0 0 N N N N N N 16.086 -10.571 -21.657 -6.058 -3.397 3.192 HABB 1KY 45
1KY HAG HAG H 0 1 N N N N N N 15.124 -15.697 -19.172 -5.275 1.447 -1.847 HAG 1KY 46
1KY HAH HAH H 0 1 N N N N N N 17.377 -14.940 -18.504 -7.105 -0.101 -2.407 HAH 1KY 47
1KY HAI HAI H 0 1 N N N N N N 8.802 -11.371 -20.551 2.693 -1.718 1.922 HAI 1KY 48
1KY HAJ HAJ H 0 1 N N N N N N 7.999 -11.480 -22.877 5.038 -1.982 2.552 HAJ 1KY 49
1KY HAK HAK H 0 1 N N N N N N 14.137 -11.700 -20.293 -4.581 -0.678 1.793 HAK 1KY 50
1KY HAL HAL H 0 1 N N N N N N 5.715 -14.081 -19.499 3.850 -0.279 -1.918 HAL 1KY 51
1KY HAM HAM H 0 1 N N N N N N 10.592 -15.992 -16.157 0.417 3.710 1.008 HAM 1KY 52
1KY HAMA HAMA H 0 0 N N N N N N 9.487 -15.968 -14.741 2.081 4.031 1.553 HAMA 1KY 53
1KY HAN HAN H 0 1 N N N N N N 12.126 -15.720 -20.937 -4.419 3.005 -0.742 HAN 1KY 54
1KY HANA HANA H 0 0 N N N N N N 13.831 -16.075 -20.497 -3.264 1.945 -1.584 HANA 1KY 55
1KY HAO HAO H 0 1 N N N N N N 8.313 -16.889 -16.733 1.929 3.852 -0.924 HAO 1KY 56
1KY HAOA HAOA H 0 0 N N N N N N 7.597 -15.315 -16.248 2.970 2.592 -0.226 HAOA 1KY 57
1KY HAQ HAQ H 0 1 N N N N N N 12.321 -17.080 -18.827 -2.222 4.085 -0.779 HAQ 1KY 58
1KY HAQA HAQA H 0 0 N N N N N N 13.257 -15.742 -18.079 -2.606 3.603 0.891 HAQA 1KY 59
1KY HAR HAR H 0 1 N N N N N N 9.800 -16.005 -19.796 -0.237 3.423 -1.646 HAR 1KY 60
1KY HARA HARA H 0 0 N N N N N N 9.919 -17.052 -18.341 -0.786 1.775 -2.005 HARA 1KY 61
1KY HNAS HNAS H 0 0 N N N N N N 6.260 -12.512 -24.497 7.538 -1.699 1.706 HNAS 1KY 62
1KY HBF HBF H 0 1 N N N N N N 7.870 -15.394 -18.674 1.550 1.556 -1.886 HBF 1KY 63
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1KY NBH C SING N N 1
1KY C O DOUB N N 2
1KY C CA SING N N 3
1KY SBJ N SING N N 4
1KY N CBF SING N N 5
1KY N CA SING N N 6
1KY CA CB SING N N 7
1KY CA HA SING N N 8
1KY CAM CB SING N N 9
1KY CB HB SING N N 10
1KY CB HBA SING N N 11
1KY OAT CAA SING N N 12
1KY CAA HAA SING N N 13
1KY CAA HAAA SING N N 14
1KY CAA HAAB SING N N 15
1KY CAB OAU SING N N 16
1KY CAB HAB SING N N 17
1KY CAB HABA SING N N 18
1KY CAB HABB SING N N 19
1KY OAD CBC DOUB N N 20
1KY SBJ OAE DOUB N N 21
1KY SBJ OAF DOUB N N 22
1KY CAY CAG DOUB Y N 23
1KY CAG CAH SING Y N 24
1KY CAG HAG SING N N 25
1KY CBA CAH DOUB Y N 26
1KY CAH HAH SING N N 27
1KY CAJ CAI DOUB Y N 28
1KY CAI CAZ SING Y N 29
1KY CAI HAI SING N N 30
1KY CBD CAJ SING Y N 31
1KY CAJ HAJ SING N N 32
1KY CAK CAY SING Y N 33
1KY CAK CBB DOUB Y N 34
1KY CAK HAK SING N N 35
1KY CBE CAL SING Y N 36
1KY CAL CAZ DOUB Y N 37
1KY CAL HAL SING N N 38
1KY CAO CAM SING N N 39
1KY CAM HAM SING N N 40
1KY CAM HAMA SING N N 41
1KY CAN OAV SING N N 42
1KY CAN CAQ SING N N 43
1KY CAN HAN SING N N 44
1KY CAN HANA SING N N 45
1KY CBF CAO SING N N 46
1KY CAO HAO SING N N 47
1KY CAO HAOA SING N N 48
1KY CAQ NBH SING N N 49
1KY CAQ HAQ SING N N 50
1KY CAQ HAQA SING N N 51
1KY CAR NBH SING N N 52
1KY CAR CBF SING N N 53
1KY CAR HAR SING N N 54
1KY CAR HARA SING N N 55
1KY CBC NAS SING N N 56
1KY NAS CBD SING N N 57
1KY NAS HNAS SING N N 58
1KY CBA OAT SING N N 59
1KY OAU CBB SING N N 60
1KY OAV CAY SING N N 61
1KY CBC SAW SING N N 62
1KY SAW CBE SING N N 63
1KY CAZ SBJ SING N N 64
1KY CBB CBA SING Y N 65
1KY CBD CBE DOUB Y N 66
1KY CBF HBF SING N N 67
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1KY SMILES ACDLabs 12.01 O=C2N(CCOc1ccc(OC)c(OC)c1)CC3N(C2CCC3)S(=O)(=O)c5ccc4c(SC(=O)N4)c5
1KY InChI InChI 1.03 InChI=1S/C24H27N3O7S2/c1-32-20-9-6-16(12-21(20)33-2)34-11-10-26-14-15-4-3-5-19(23(26)28)27(15)36(30,31)17-7-8-18-22(13-17)35-24(29)25-18/h6-9,12-13,15,19H,3-5,10-11,14H2,1-2H3,(H,25,29)/t15-,19+/m1/s1
1KY InChIKey InChI 1.03 VTROBZZFTVMDIJ-BEFAXECRSA-N
1KY SMILES_CANONICAL CACTVS 3.370 COc1ccc(OCCN2C[C@H]3CCC[C@H](N3[S](=O)(=O)c4ccc5NC(=O)Sc5c4)C2=O)cc1OC
1KY SMILES CACTVS 3.370 COc1ccc(OCCN2C[CH]3CCC[CH](N3[S](=O)(=O)c4ccc5NC(=O)Sc5c4)C2=O)cc1OC
1KY SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 COc1ccc(cc1OC)OCCN2C[C@H]3CCC[C@@H](C2=O)[N@@]3S(=O)(=O)c4ccc5c(c4)SC(=O)N5
1KY SMILES "OpenEye OEToolkits" 1.7.6 COc1ccc(cc1OC)OCCN2CC3CCCC(C2=O)N3S(=O)(=O)c4ccc5c(c4)SC(=O)N5
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1KY "SYSTEMATIC NAME" ACDLabs 12.01 6-({(1S,5R)-3-[2-(3,4-dimethoxyphenoxy)ethyl]-2-oxo-3,9-diazabicyclo[3.3.1]non-9-yl}sulfonyl)-1,3-benzothiazol-2(3H)-one
1KY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 6-[[(1R,5S,9R)-3-[2-(3,4-dimethoxyphenoxy)ethyl]-4-oxidanylidene-3,9-diazabicyclo[3.3.1]nonan-9-yl]sulfonyl]-3H-1,3-benzothiazol-2-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1KY 'Create component' 2013-03-13 RCSB
1KY 'Initial release' 2013-08-28 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
1KY C C 4.498 1.783 1
1KY N N 8.613 4.407 2
1KY O O 3.000 1.705 3
1KY CA C 5.690 3.691 4
1KY CB C 4.391 5.522 5
1KY CAA C 11.418 -7.196 6
1KY CAB C 5.622 -8.748 7
1KY OAD O 17.604 6.657 8
1KY OAE O 9.162 6.456 9
1KY OAF O 10.662 3.858 10
1KY CAG C 8.236 -4.014 11
1KY CAH C 9.296 -5.074 12
1KY CAI C 11.211 7.407 13
1KY CAJ C 12.510 8.157 14
1KY CAK C 6.399 -5.851 15
1KY CAL C 12.510 5.157 16
1KY CAM C 5.230 6.766 17
1KY CAN C 6.114 -1.892 18
1KY CAO C 6.672 6.352 19
1KY CAQ C 5.054 -0.832 20
1KY CAR C 6.842 1.155 21
1KY NAS N 15.228 7.864 22
1KY OAT O 9.969 -7.584 23
1KY OAU O 7.071 -8.360 24
1KY OAV O 5.726 -3.341 25
1KY SAW S 15.228 5.450 26
1KY CAY C 6.787 -4.402 27
1KY CAZ C 11.211 5.907 28
1KY CBA C 8.908 -6.523 29
1KY CBB C 7.459 -6.911 30
1KY CBC C 16.104 6.657 31
1KY CBD C 13.809 7.407 32
1KY CBE C 13.809 5.907 33
1KY CBF C 7.139 3.302 34
1KY NBH N 5.442 0.617 35
1KY SBJ S 9.912 5.157 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
1KY NBH C SINGLE NONE 1
1KY C O DOUBLE NONE 2
1KY C CA SINGLE NONE 3
1KY SBJ N SINGLE NONE 4
1KY N CBF SINGLE NONE 5
1KY N CA SINGLE NONE 6
1KY CA CB SINGLE NONE 7
1KY CAM CB SINGLE NONE 8
1KY OAT CAA SINGLE NONE 9
1KY CAB OAU SINGLE NONE 10
1KY OAD CBC DOUBLE NONE 11
1KY SBJ OAE DOUBLE NONE 12
1KY SBJ OAF DOUBLE NONE 13
1KY CAY CAG DOUBLE NONE 14
1KY CAG CAH SINGLE NONE 15
1KY CBA CAH DOUBLE NONE 16
1KY CAJ CAI DOUBLE NONE 17
1KY CAI CAZ SINGLE NONE 18
1KY CBD CAJ SINGLE NONE 19
1KY CAK CAY SINGLE NONE 20
1KY CAK CBB DOUBLE NONE 21
1KY CBE CAL SINGLE NONE 22
1KY CAL CAZ DOUBLE NONE 23
1KY CAO CAM SINGLE NONE 24
1KY CAN OAV SINGLE NONE 25
1KY CAN CAQ SINGLE NONE 26
1KY CBF CAO SINGLE NONE 27
1KY CAQ NBH SINGLE NONE 28
1KY CAR NBH SINGLE NONE 29
1KY CAR CBF SINGLE NONE 30
1KY CBC NAS SINGLE NONE 31
1KY NAS CBD SINGLE NONE 32
1KY CBA OAT SINGLE NONE 33
1KY OAU CBB SINGLE NONE 34
1KY OAV CAY SINGLE NONE 35
1KY CBC SAW SINGLE NONE 36
1KY SAW CBE SINGLE NONE 37
1KY CAZ SBJ SINGLE NONE 38
1KY CBB CBA SINGLE NONE 39
1KY CBD CBE DOUBLE NONE 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
1KY MurckoScaffold S1 scaffold 'O=C1[C@@H]2CCC[C@H](CN1CCOc1ccccc1)N2S(=O)(=O)c1ccc2[nH]c(=O)sc2c1' InChI=1S/C22H23N3O5S2/c26-21-19-8-4-5-15(14-24(21)11-12-30-16-6-2-1-3-7-16)25(19)32(28,29)17-9-10-18-20(13-17)31-22(27)23-18/h1-3,6-7,9-10,13,15,19H,4-5,8,11-12,14H2,(H,23,27)/t15-,19+/m1/s1 NWKQZTWDMSHDFW-BEFAXECRSA-N
1KY amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
1KY benzothiazole F2 fragment c1ccc2scnc2c1 InChI=1S/C7H5NS/c1-2-4-7-6(3-1)8-5-9-7/h1-5H IOJUPLGTWVMSFF-UHFFFAOYSA-N
1KY peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
1KY phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
1KY piperazine F5 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
1KY thiazole F6 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
1KY C S1 1
1KY N S1 1
1KY O S1 1
1KY CA S1 1
1KY CB S1 1
1KY OAD S1 1
1KY OAE S1 1
1KY OAF S1 1
1KY CAG S1 1
1KY CAH S1 1
1KY CAI S1 1
1KY CAJ S1 1
1KY CAK S1 1
1KY CAL S1 1
1KY CAM S1 1
1KY CAN S1 1
1KY CAO S1 1
1KY CAQ S1 1
1KY CAR S1 1
1KY NAS S1 1
1KY OAV S1 1
1KY SAW S1 1
1KY CAY S1 1
1KY CAZ S1 1
1KY CBA S1 1
1KY CBB S1 1
1KY CBC S1 1
1KY CBD S1 1
1KY CBE S1 1
1KY CBF S1 1
1KY NBH S1 1
1KY SBJ S1 1
1KY NBH F1 1
1KY C F1 1
1KY O F1 1
1KY CA F1 1
1KY CBE F2 1
1KY SAW F2 1
1KY CBC F2 1
1KY NAS F2 1
1KY CBD F2 1
1KY CAJ F2 1
1KY CAI F2 1
1KY CAZ F2 1
1KY CAL F2 1
1KY O F3 1
1KY C F3 1
1KY CA F3 1
1KY N F3 1
1KY CAG F4 1
1KY CAY F4 1
1KY CAK F4 1
1KY CBB F4 1
1KY CBA F4 1
1KY CAH F4 1
1KY CAI F4 2
1KY CAJ F4 2
1KY CBD F4 2
1KY CBE F4 2
1KY CAL F4 2
1KY CAZ F4 2
1KY N F5 1
1KY CBF F5 1
1KY CAR F5 1
1KY NBH F5 1
1KY C F5 1
1KY CA F5 1
1KY CBE F6 1
1KY CBD F6 1
1KY NAS F6 1
1KY CBC F6 1
1KY SAW F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 1KY
_pdbe_chem_comp_rdkit_properties.exactmw 533.129
_pdbe_chem_comp_rdkit_properties.amw 533.628
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 63
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.417
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 2
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 249.969
_pdbe_chem_comp_rdkit_properties.tpsa 118.240
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.416
_pdbe_chem_comp_rdkit_properties.CrippenMR 131.160
_pdbe_chem_comp_rdkit_properties.chi0v 18.649
_pdbe_chem_comp_rdkit_properties.chi1v 11.333
_pdbe_chem_comp_rdkit_properties.chi2v 6.588
_pdbe_chem_comp_rdkit_properties.chi3v 6.588
_pdbe_chem_comp_rdkit_properties.chi4v 4.782
_pdbe_chem_comp_rdkit_properties.chi0n 44.016
_pdbe_chem_comp_rdkit_properties.chi1n 22.524
_pdbe_chem_comp_rdkit_properties.chi2n 4.256
_pdbe_chem_comp_rdkit_properties.chi3n 4.256
_pdbe_chem_comp_rdkit_properties.chi4n 2.775
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.090
_pdbe_chem_comp_rdkit_properties.kappa1 8.204
_pdbe_chem_comp_rdkit_properties.kappa2 9.753
_pdbe_chem_comp_rdkit_properties.kappa3 4.441
_pdbe_chem_comp_rdkit_properties.Phi 2.223
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
1KY UniChem PDBe 1KY
1KY UniChem ZINC ZINC000095605349
1KY UniChem PubChem 71662771
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
1KY C -0.756 -0.943 -2.822 ETKDGv3 1
1KY N -2.639 -0.346 -1.454 ETKDGv3 2
1KY O -0.354 -1.552 -3.851 ETKDGv3 3
1KY CA -2.110 -0.292 -2.827 ETKDGv3 4
1KY CB -1.988 1.157 -3.345 ETKDGv3 5
1KY CAA 8.252 0.046 2.406 ETKDGv3 6
1KY CAB 2.897 1.791 2.335 ETKDGv3 7
1KY OAD -6.449 -3.375 5.405 ETKDGv3 8
1KY OAE -5.118 -0.847 -2.292 ETKDGv3 9
1KY OAF -4.638 1.453 -1.637 ETKDGv3 10
1KY CAG 5.779 -0.759 -1.162 ETKDGv3 11
1KY CAH 6.624 -0.499 0.020 ETKDGv3 12
1KY CAI -5.182 0.749 1.266 ETKDGv3 13
1KY CAJ -5.568 0.477 2.523 ETKDGv3 14
1KY CAK 3.952 0.386 -0.024 ETKDGv3 15
1KY CAL -5.010 -1.636 0.703 ETKDGv3 16
1KY CAM -1.155 2.034 -2.402 ETKDGv3 17
1KY CAN 2.362 -0.304 -2.499 ETKDGv3 18
1KY CAO -1.598 1.885 -0.943 ETKDGv3 19
1KY CAQ 1.486 -1.283 -1.712 ETKDGv3 20
1KY CAR -0.441 -0.339 -0.375 ETKDGv3 21
1KY NAS -6.103 -1.336 4.260 ETKDGv3 22
1KY OAT 6.890 0.426 2.231 ETKDGv3 23
1KY OAU 4.227 1.300 2.192 ETKDGv3 24
1KY OAV 3.744 -0.624 -2.341 ETKDGv3 25
1KY SAW -5.660 -3.531 2.824 ETKDGv3 26
1KY CAY 4.506 -0.348 -1.195 ETKDGv3 27
1KY CAZ -4.893 -0.356 0.307 ETKDGv3 28
1KY CBA 6.124 0.158 1.085 ETKDGv3 29
1KY CBB 4.716 0.622 1.062 ETKDGv3 30
1KY CBC -6.130 -2.757 4.356 ETKDGv3 31
1KY CBD -5.702 -0.930 2.945 ETKDGv3 32
1KY CBE -5.437 -1.918 2.083 ETKDGv3 33
1KY CBF -1.787 0.407 -0.516 ETKDGv3 34
1KY NBH 0.100 -0.803 -1.667 ETKDGv3 35
1KY SBJ -4.348 0.011 -1.326 ETKDGv3 36
1KY HA -2.775 -0.867 -3.507 ETKDGv3 37
1KY HB -1.513 1.155 -4.351 ETKDGv3 38
1KY HBA -2.995 1.602 -3.477 ETKDGv3 39
1KY HAA 8.350 -1.059 2.355 ETKDGv3 40
1KY HAAA 8.598 0.387 3.404 ETKDGv3 41
1KY HAAB 8.884 0.524 1.629 ETKDGv3 42
1KY HAB 2.682 2.547 1.550 ETKDGv3 43
1KY HABA 2.793 2.273 3.329 ETKDGv3 44
1KY HABB 2.171 0.954 2.268 ETKDGv3 45
1KY HAG 6.199 -1.292 -2.005 ETKDGv3 46
1KY HAH 7.646 -0.851 0.003 ETKDGv3 47
1KY HAI -5.074 1.780 0.955 ETKDGv3 48
1KY HAJ -5.775 1.279 3.220 ETKDGv3 49
1KY HAK 2.929 0.726 -0.047 ETKDGv3 50
1KY HAL -4.788 -2.453 0.028 ETKDGv3 51
1KY HAM -0.081 1.767 -2.493 ETKDGv3 52
1KY HAMA -1.253 3.098 -2.709 ETKDGv3 53
1KY HAN 2.172 0.745 -2.191 ETKDGv3 54
1KY HANA 2.108 -0.380 -3.577 ETKDGv3 55
1KY HAO -2.546 2.440 -0.791 ETKDGv3 56
1KY HAOA -0.848 2.374 -0.284 ETKDGv3 57
1KY HAQ 1.884 -1.397 -0.681 ETKDGv3 58
1KY HAQA 1.527 -2.291 -2.180 ETKDGv3 59
1KY HAR 0.302 0.314 0.134 ETKDGv3 60
1KY HARA -0.597 -1.227 0.275 ETKDGv3 61
1KY HNAS -6.341 -0.682 5.039 ETKDGv3 62
1KY HBF -2.256 0.411 0.492 ETKDGv3 63
#