data_1XD
#
_chem_comp.id 1XD
_chem_comp.name N-{4-[(3,5-difluorophenyl)sulfonyl]benzyl}imidazo[1,2-a]pyridine-7-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H15 F2 N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-07-24
_chem_comp.pdbx_modified_date 2014-06-06
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 427.424
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 1XD
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4L4M
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1XD C4 C4 C 0 1 Y N N N N N 14.853 7.707 -1.022 -1.472 0.265 -1.200 C4 1XD 1
1XD C5 C5 C 0 1 Y N N N N N 15.486 8.662 -0.257 -0.336 -0.522 -1.196 C5 1XD 2
1XD C6 C6 C 0 1 Y N N N N N 15.873 8.380 1.037 0.233 -0.908 0.004 C6 1XD 3
1XD C7 C7 C 0 1 N N N N N N 16.572 9.446 1.836 1.472 -1.766 0.008 C7 1XD 4
1XD C13 C13 C 0 1 Y N N N N N 15.376 9.574 7.352 6.045 1.600 0.013 C13 1XD 5
1XD C15 C15 C 0 1 Y N N N N N 13.827 10.459 9.103 8.543 1.618 -0.003 C15 1XD 6
1XD C24 C24 C 0 1 Y N N N N N 15.361 4.765 -3.684 -5.419 0.162 1.196 C24 1XD 7
1XD C26 C26 C 0 1 Y N N N N N 17.357 3.431 -3.632 -7.048 -1.135 0.008 C26 1XD 8
1XD C28 C28 C 0 1 Y N N N N N 16.085 3.773 -1.629 -5.420 0.147 -1.198 C28 1XD 9
1XD C1 C1 C 0 1 Y N N N N N 15.640 7.129 1.568 -0.335 -0.507 1.198 C1 1XD 10
1XD C2 C2 C 0 1 Y N N N N N 15.005 6.168 0.802 -1.472 0.280 1.194 C2 1XD 11
1XD C3 C3 C 0 1 Y N N N N N 14.606 6.464 -0.487 -2.040 0.666 -0.005 C3 1XD 12
1XD N8 N8 N 0 1 N N N N N N 16.193 9.506 3.250 2.659 -0.908 0.003 N8 1XD 13
1XD C9 C9 C 0 1 N N N N N N 15.118 10.209 3.669 3.889 -1.459 0.006 C9 1XD 14
1XD O10 O10 O 0 1 N N N N N N 14.419 10.806 2.869 4.013 -2.669 0.013 O10 1XD 15
1XD C11 C11 C 0 1 Y N N N N N 14.808 10.247 5.115 5.086 -0.595 0.000 C11 1XD 16
1XD C12 C12 C 0 1 Y N N N N N 15.637 9.550 6.033 4.951 0.816 0.011 C12 1XD 17
1XD N14 N14 N 0 1 Y N N N N N 14.307 10.274 7.837 7.299 1.056 0.003 N14 1XD 18
1XD C16 C16 C 0 1 Y N N N N N 12.730 11.250 9.012 9.441 0.604 -0.012 C16 1XD 19
1XD N17 N17 N 0 1 Y N N N N N 12.535 11.544 7.725 8.778 -0.552 -0.012 N17 1XD 20
1XD C18 C18 C 0 1 Y N N N N N 13.478 10.967 6.988 7.475 -0.305 -0.002 C18 1XD 21
1XD C19 C19 C 0 1 Y N N N N N 13.724 10.961 5.599 6.353 -1.153 0.003 C19 1XD 22
1XD S20 S20 S 0 1 N N N N N N 13.813 5.251 -1.480 -3.490 1.668 -0.011 S20 1XD 23
1XD O21 O21 O 0 1 N N N N N N 13.289 4.264 -0.603 -3.509 2.352 1.234 O21 1XD 24
1XD O22 O22 O 0 1 N N N N N N 13.027 5.958 -2.431 -3.510 2.336 -1.265 O22 1XD 25
1XD C23 C23 C 0 1 Y N N N N N 15.178 4.539 -2.334 -4.876 0.580 -0.004 C23 1XD 26
1XD C25 C25 C 0 1 Y N N N N N 16.451 4.207 -4.336 -6.505 -0.697 1.203 C25 1XD 27
1XD C27 C27 C 0 1 Y N N N N N 17.175 3.214 -2.276 -6.503 -0.715 -1.194 C27 1XD 28
1XD F29 F29 F 0 1 N N N N N N 18.059 2.458 -1.584 -7.028 -1.147 -2.361 F29 1XD 29
1XD F30 F30 F 0 1 N N N N N N 16.630 4.419 -5.660 -7.035 -1.106 2.377 F30 1XD 30
1XD H1 H1 H 0 1 N N N N N N 14.553 7.933 -2.035 -1.914 0.570 -2.137 H1 1XD 31
1XD H2 H2 H 0 1 N N N N N N 15.681 9.639 -0.673 0.108 -0.835 -2.129 H2 1XD 32
1XD H3 H3 H 0 1 N N N N N N 17.655 9.260 1.780 1.479 -2.389 0.902 H3 1XD 33
1XD H4 H4 H 0 1 N N N N N N 16.343 10.420 1.379 1.478 -2.400 -0.878 H4 1XD 34
1XD H5 H5 H 0 1 N N N N N N 16.017 9.035 8.034 5.930 2.674 0.017 H5 1XD 35
1XD H6 H6 H 0 1 N N N N N N 14.245 10.050 10.011 8.769 2.674 -0.001 H6 1XD 36
1XD H7 H7 H 0 1 N N N N N N 14.657 5.375 -4.231 -4.993 0.501 2.129 H7 1XD 37
1XD H8 H8 H 0 1 N N N N N N 18.205 2.995 -4.140 -7.893 -1.808 0.012 H8 1XD 38
1XD H9 H9 H 0 1 N N N N N N 15.944 3.609 -0.571 -4.995 0.475 -2.135 H9 1XD 39
1XD H10 H10 H 0 1 N N N N N N 15.952 6.901 2.577 0.110 -0.808 2.135 H10 1XD 40
1XD H11 H11 H 0 1 N N N N N N 14.821 5.186 1.212 -1.915 0.593 2.128 H11 1XD 41
1XD H12 H12 H 0 1 N N N N N N 16.745 9.013 3.923 2.561 0.057 -0.003 H12 1XD 42
1XD H13 H13 H 0 1 N N N N N N 16.488 8.994 5.668 3.968 1.263 0.019 H13 1XD 43
1XD H14 H14 H 0 1 N N N N N N 12.120 11.584 9.838 10.515 0.713 -0.019 H14 1XD 44
1XD H15 H15 H 0 1 N N N N N N 13.078 11.504 4.924 6.478 -2.226 -0.005 H15 1XD 45
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1XD F30 C25 SING N N 1
1XD C25 C24 DOUB Y N 2
1XD C25 C26 SING Y N 3
1XD C24 C23 SING Y N 4
1XD C26 C27 DOUB Y N 5
1XD O22 S20 DOUB N N 6
1XD C23 C28 DOUB Y N 7
1XD C23 S20 SING N N 8
1XD C27 C28 SING Y N 9
1XD C27 F29 SING N N 10
1XD S20 O21 DOUB N N 11
1XD S20 C3 SING N N 12
1XD C4 C3 DOUB Y N 13
1XD C4 C5 SING Y N 14
1XD C3 C2 SING Y N 15
1XD C5 C6 DOUB Y N 16
1XD C2 C1 DOUB Y N 17
1XD C6 C1 SING Y N 18
1XD C6 C7 SING N N 19
1XD C7 N8 SING N N 20
1XD O10 C9 DOUB N N 21
1XD N8 C9 SING N N 22
1XD C9 C11 SING N N 23
1XD C11 C19 DOUB Y N 24
1XD C11 C12 SING Y N 25
1XD C19 C18 SING Y N 26
1XD C12 C13 DOUB Y N 27
1XD C18 N17 DOUB Y N 28
1XD C18 N14 SING Y N 29
1XD C13 N14 SING Y N 30
1XD N17 C16 SING Y N 31
1XD N14 C15 SING Y N 32
1XD C16 C15 DOUB Y N 33
1XD C4 H1 SING N N 34
1XD C5 H2 SING N N 35
1XD C7 H3 SING N N 36
1XD C7 H4 SING N N 37
1XD C13 H5 SING N N 38
1XD C15 H6 SING N N 39
1XD C24 H7 SING N N 40
1XD C26 H8 SING N N 41
1XD C28 H9 SING N N 42
1XD C1 H10 SING N N 43
1XD C2 H11 SING N N 44
1XD N8 H12 SING N N 45
1XD C12 H13 SING N N 46
1XD C16 H14 SING N N 47
1XD C19 H15 SING N N 48
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1XD SMILES ACDLabs 12.01 Fc1cc(cc(F)c1)S(=O)(=O)c2ccc(cc2)CNC(=O)c3cc4nccn4cc3
1XD InChI InChI 1.03 InChI=1S/C21H15F2N3O3S/c22-16-10-17(23)12-19(11-16)30(28,29)18-3-1-14(2-4-18)13-25-21(27)15-5-7-26-8-6-24-20(26)9-15/h1-12H,13H2,(H,25,27)
1XD InChIKey InChI 1.03 YECCIJSXGJHBSG-UHFFFAOYSA-N
1XD SMILES_CANONICAL CACTVS 3.385 Fc1cc(F)cc(c1)[S](=O)(=O)c2ccc(CNC(=O)c3ccn4ccnc4c3)cc2
1XD SMILES CACTVS 3.385 Fc1cc(F)cc(c1)[S](=O)(=O)c2ccc(CNC(=O)c3ccn4ccnc4c3)cc2
1XD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 c1cc(ccc1CNC(=O)c2ccn3ccnc3c2)S(=O)(=O)c4cc(cc(c4)F)F
1XD SMILES "OpenEye OEToolkits" 1.7.6 c1cc(ccc1CNC(=O)c2ccn3ccnc3c2)S(=O)(=O)c4cc(cc(c4)F)F
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1XD "SYSTEMATIC NAME" ACDLabs 12.01 N-{4-[(3,5-difluorophenyl)sulfonyl]benzyl}imidazo[1,2-a]pyridine-7-carboxamide
1XD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 N-[[4-[3,5-bis(fluoranyl)phenyl]sulfonylphenyl]methyl]imidazo[1,2-a]pyridine-7-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1XD 'Create component' 2013-07-24 RCSB
1XD 'Initial release' 2014-06-11 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
1XD C4 C 9.495 -2.250 1
1XD C5 C 10.794 -3.000 2
1XD C6 C 12.093 -2.250 3
1XD C7 C 13.392 -3.000 4
1XD C13 C 18.588 0.000 5
1XD C15 C 21.307 -0.293 6
1XD C24 C 6.897 2.250 7
1XD C26 C 4.299 2.250 8
1XD C28 C 5.598 0.000 9
1XD C1 C 12.093 -0.750 10
1XD C2 C 10.794 0.000 11
1XD C3 C 9.495 -0.750 12
1XD N8 N 14.691 -2.250 13
1XD C9 C 15.990 -3.000 14
1XD O10 O 15.990 -4.500 15
1XD C11 C 17.290 -2.250 16
1XD C12 C 17.290 -0.750 17
1XD N14 N 19.887 -0.750 18
1XD C16 C 22.182 -1.500 19
1XD N17 N 21.307 -2.707 20
1XD C18 C 19.887 -2.250 21
1XD C19 C 18.588 -3.000 22
1XD S20 S 8.196 0.000 23
1XD O21 O 8.946 1.299 24
1XD O22 O 7.446 -1.299 25
1XD C23 C 6.897 0.750 26
1XD C25 C 5.598 3.000 27
1XD C27 C 4.299 0.750 28
1XD F29 F 3.000 0.000 29
1XD F30 F 5.598 4.500 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
1XD F30 C25 SINGLE NONE 1
1XD C25 C24 DOUBLE NONE 2
1XD C25 C26 SINGLE NONE 3
1XD C24 C23 SINGLE NONE 4
1XD C26 C27 DOUBLE NONE 5
1XD O22 S20 DOUBLE NONE 6
1XD C23 C28 DOUBLE NONE 7
1XD C23 S20 SINGLE NONE 8
1XD C27 C28 SINGLE NONE 9
1XD C27 F29 SINGLE NONE 10
1XD S20 O21 DOUBLE NONE 11
1XD S20 C3 SINGLE NONE 12
1XD C4 C3 DOUBLE NONE 13
1XD C4 C5 SINGLE NONE 14
1XD C3 C2 SINGLE NONE 15
1XD C5 C6 DOUBLE NONE 16
1XD C2 C1 DOUBLE NONE 17
1XD C6 C1 SINGLE NONE 18
1XD C6 C7 SINGLE NONE 19
1XD C7 N8 SINGLE NONE 20
1XD O10 C9 DOUBLE NONE 21
1XD N8 C9 SINGLE NONE 22
1XD C9 C11 SINGLE NONE 23
1XD C11 C19 DOUBLE NONE 24
1XD C11 C12 SINGLE NONE 25
1XD C19 C18 SINGLE NONE 26
1XD C12 C13 DOUBLE NONE 27
1XD C18 N17 DOUBLE NONE 28
1XD C18 N14 SINGLE NONE 29
1XD C13 N14 SINGLE NONE 30
1XD N17 C16 SINGLE NONE 31
1XD N14 C15 SINGLE NONE 32
1XD C16 C15 DOUBLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
1XD MurckoScaffold S1 scaffold O=C(NCc1ccc(S(=O)(=O)c2ccccc2)cc1)c1ccn2ccnc2c1 InChI=1S/C21H17N3O3S/c25-21(17-10-12-24-13-11-22-20(24)14-17)23-15-16-6-8-19(9-7-16)28(26,27)18-4-2-1-3-5-18/h1-14H,15H2,(H,23,25) JCQOLENPUCDXDL-UHFFFAOYSA-N
1XD amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
1XD imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
1XD phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
1XD pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
1XD C4 S1 1
1XD C5 S1 1
1XD C6 S1 1
1XD C7 S1 1
1XD C13 S1 1
1XD C15 S1 1
1XD C24 S1 1
1XD C26 S1 1
1XD C28 S1 1
1XD C1 S1 1
1XD C2 S1 1
1XD C3 S1 1
1XD N8 S1 1
1XD C9 S1 1
1XD O10 S1 1
1XD C11 S1 1
1XD C12 S1 1
1XD N14 S1 1
1XD C16 S1 1
1XD N17 S1 1
1XD C18 S1 1
1XD C19 S1 1
1XD S20 S1 1
1XD O21 S1 1
1XD O22 S1 1
1XD C23 S1 1
1XD C25 S1 1
1XD C27 S1 1
1XD N8 F1 1
1XD C9 F1 1
1XD O10 F1 1
1XD C11 F1 1
1XD C15 F2 1
1XD C16 F2 1
1XD N17 F2 1
1XD C18 F2 1
1XD N14 F2 1
1XD C4 F3 1
1XD C3 F3 1
1XD C2 F3 1
1XD C1 F3 1
1XD C6 F3 1
1XD C5 F3 1
1XD C24 F3 2
1XD C25 F3 2
1XD C26 F3 2
1XD C27 F3 2
1XD C28 F3 2
1XD C23 F3 2
1XD C13 F4 1
1XD C12 F4 1
1XD C11 F4 1
1XD C19 F4 1
1XD C18 F4 1
1XD N14 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 1XD
_pdbe_chem_comp_rdkit_properties.exactmw 427.080
_pdbe_chem_comp_rdkit_properties.amw 427.432
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 45
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.048
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 191.414
_pdbe_chem_comp_rdkit_properties.tpsa 80.540
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.836
_pdbe_chem_comp_rdkit_properties.CrippenMR 104.119
_pdbe_chem_comp_rdkit_properties.chi0v 15.047
_pdbe_chem_comp_rdkit_properties.chi1v 9.122
_pdbe_chem_comp_rdkit_properties.chi2v 4.837
_pdbe_chem_comp_rdkit_properties.chi3v 4.837
_pdbe_chem_comp_rdkit_properties.chi4v 3.060
_pdbe_chem_comp_rdkit_properties.chi0n 29.231
_pdbe_chem_comp_rdkit_properties.chi1n 15.086
_pdbe_chem_comp_rdkit_properties.chi2n 3.354
_pdbe_chem_comp_rdkit_properties.chi3n 3.354
_pdbe_chem_comp_rdkit_properties.chi4n 2.037
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.590
_pdbe_chem_comp_rdkit_properties.kappa1 8.646
_pdbe_chem_comp_rdkit_properties.kappa2 7.677
_pdbe_chem_comp_rdkit_properties.kappa3 3.921
_pdbe_chem_comp_rdkit_properties.Phi 2.212
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
1XD UniChem PDBe 1XD
1XD UniChem ZINC ZINC000098208049
1XD UniChem SureChEMBL SCHEMBL168623
1XD UniChem PubChem 66611965
1XD UniChem BindingDb 112625
1XD UniChem BRENDA 209390
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
1XD C4 -1.795 1.781 2.261 ETKDGv3 1
1XD C5 -0.417 2.309 2.181 ETKDGv3 2
1XD C6 0.035 2.850 1.036 ETKDGv3 3
1XD C7 1.449 3.350 0.919 ETKDGv3 4
1XD C13 3.281 -0.715 -2.710 ETKDGv3 5
1XD C15 4.742 -2.865 -2.827 ETKDGv3 6
1XD C24 -4.356 -0.997 -0.515 ETKDGv3 7
1XD C26 -3.998 -3.290 0.243 ETKDGv3 8
1XD C28 -3.895 -1.447 1.841 ETKDGv3 9
1XD C1 -0.856 2.899 -0.148 ETKDGv3 10
1XD C2 -2.104 2.419 -0.074 ETKDGv3 11
1XD C3 -2.604 1.837 1.192 ETKDGv3 12
1XD N8 2.237 2.432 0.100 ETKDGv3 13
1XD C9 2.627 1.131 0.567 ETKDGv3 14
1XD O10 2.517 0.851 1.793 ETKDGv3 15
1XD C11 3.165 0.117 -0.371 ETKDGv3 16
1XD C12 2.806 0.185 -1.833 ETKDGv3 17
1XD N14 4.142 -1.739 -2.222 ETKDGv3 18
1XD C16 5.359 -3.547 -1.865 ETKDGv3 19
1XD N17 5.176 -2.909 -0.590 ETKDGv3 20
1XD C18 4.461 -1.866 -0.860 ETKDGv3 21
1XD C19 3.950 -0.883 0.096 ETKDGv3 22
1XD S20 -4.229 1.170 1.269 ETKDGv3 23
1XD O21 -4.804 1.367 2.644 ETKDGv3 24
1XD O22 -5.117 1.879 0.285 ETKDGv3 25
1XD C23 -4.162 -0.545 0.883 ETKDGv3 26
1XD C25 -4.279 -2.299 -0.818 ETKDGv3 27
1XD C27 -3.815 -2.885 1.506 ETKDGv3 28
1XD F29 -3.552 -3.791 2.479 ETKDGv3 29
1XD F30 -4.455 -2.712 -2.097 ETKDGv3 30
1XD H1 -2.136 1.338 3.189 ETKDGv3 31
1XD H2 0.221 2.243 3.053 ETKDGv3 32
1XD H3 1.434 4.351 0.437 ETKDGv3 33
1XD H4 1.927 3.475 1.915 ETKDGv3 34
1XD H5 3.010 -0.672 -3.757 ETKDGv3 35
1XD H6 4.699 -3.119 -3.877 ETKDGv3 36
1XD H7 -4.555 -0.274 -1.296 ETKDGv3 37
1XD H8 -3.938 -4.341 -0.006 ETKDGv3 38
1XD H9 -3.732 -1.133 2.864 ETKDGv3 39
1XD H10 -0.497 3.316 -1.080 ETKDGv3 40
1XD H11 -2.743 2.452 -0.947 ETKDGv3 41
1XD H12 2.546 2.758 -0.842 ETKDGv3 42
1XD H13 2.130 0.949 -2.193 ETKDGv3 43
1XD H14 5.912 -4.465 -2.012 ETKDGv3 44
1XD H15 4.212 -0.964 1.144 ETKDGv3 45
#