data_23I
#
_chem_comp.id 23I
_chem_comp.name
"N-[(1S,2S,4R)-2-HYDROXY-1-ISOBUTYL-5-({(1S)-1-[(ISOPROPYLAMINO)CARBONYL]-2-METHYLPROPYL}AMINO)-4-METHYL-5-OXOPENTYL]-5-[METHYL(METHYLSULFONYL)AMINO]-N'-[(1R)-1-PHENYLETHYL]ISOPHTHALAMIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C36 H55 N5 O7 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2007-04-13
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 701.916
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 23I
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details "OpenEye OEToolkits"
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
23I O4 O4 O 0 1 N N N N N N 42.815 41.331 31.920 -7.508 4.638 -10.371 O4 23I 1
23I C11 C11 C 0 1 Y N N N N N 27.202 45.501 34.511 -13.784 11.881 -13.036 C11 23I 2
23I C12 C12 C 0 1 Y N N N N N 26.368 44.609 35.210 -12.781 12.658 -12.457 C12 23I 3
23I C13 C13 C 0 1 Y N N N N N 26.923 43.733 36.178 -13.110 13.837 -11.789 C13 23I 4
23I C14 C14 C 0 1 Y N N N N N 28.315 43.742 36.443 -14.442 14.240 -11.700 C14 23I 5
23I C15 C15 C 0 1 Y N N N N N 29.157 44.638 35.740 -15.446 13.463 -12.279 C15 23I 6
23I C16 C16 C 0 1 Y N N N N N 28.603 45.534 34.762 -15.101 12.296 -12.938 C16 23I 7
23I C20 C20 C 0 1 N N N N N N 29.381 42.378 27.166 -15.929 2.915 -10.201 C20 23I 8
23I C21 C21 C 0 1 N N N N N N 30.358 45.600 31.823 -16.851 9.043 -13.367 C21 23I 9
23I C22 C22 C 0 1 N N N N N N 35.275 44.410 31.562 -13.424 5.629 -14.344 C22 23I 10
23I C24 C24 C 0 1 Y N N N N N 31.238 43.986 30.046 -17.146 6.711 -12.615 C24 23I 11
23I C27 C27 C 0 1 Y N N N N N 33.880 44.242 31.057 -14.728 6.008 -13.740 C27 23I 12
23I C30 C30 C 0 1 N N N N N N 40.043 42.581 32.962 -9.571 6.996 -12.260 C30 23I 13
23I C31 C31 C 0 1 N N N N N N 36.702 44.950 33.545 -11.780 6.138 -16.131 C31 23I 14
23I C32 C32 C 0 1 N N N N N N 37.257 43.717 34.297 -10.791 7.316 -15.980 C32 23I 15
23I C33 C33 C 0 1 N N N N N N 36.430 46.162 34.463 -12.056 5.798 -17.607 C33 23I 16
23I C34 C34 C 0 1 N N N N N N 35.437 47.211 33.905 -13.023 4.614 -17.831 C34 23I 17
23I C35 C35 C 0 1 N N N N N N 34.528 47.728 35.006 -12.470 3.361 -17.144 C35 23I 18
23I C17 C17 C 0 1 N N N N N N 29.485 46.532 33.960 -16.190 11.453 -13.566 C17 23I 19
23I C18 C18 C 0 1 N N N N N N 30.306 47.511 34.837 -16.474 11.847 -15.014 C18 23I 20
23I N21 N21 N 0 1 N N N N N N 30.465 45.816 33.145 -15.879 10.044 -13.486 N21 23I 21
23I O21 O21 O 0 1 N N N N N N 29.382 46.029 31.179 -18.068 9.296 -13.320 O21 23I 22
23I C23 C23 C 0 1 Y N N N N N 31.479 44.830 31.174 -16.377 7.671 -13.273 C23 23I 23
23I C25 C25 C 0 1 Y N N N N N 32.308 43.254 29.408 -16.692 5.396 -12.525 C25 23I 24
23I C26 C26 C 0 1 Y N N N N N 33.621 43.407 29.942 -15.469 5.040 -13.094 C26 23I 25
23I C28 C28 C 0 1 Y N N N N N 32.799 44.933 31.644 -15.154 7.315 -13.842 C28 23I 26
23I N22 N22 N 0 1 N N N N N N 32.058 42.409 28.212 -17.478 4.413 -11.851 N22 23I 27
23I C29 C29 C 0 1 N N N N N N 33.145 41.514 27.707 -17.929 3.232 -12.641 C29 23I 28
23I S2 S2 S 0 1 N N N N N N 30.528 41.516 28.220 -17.183 4.179 -10.166 S2 23I 29
23I O23 O23 O 0 1 N N N N N N 30.736 40.083 27.602 -18.356 3.589 -9.547 O23 23I 30
23I O24 O24 O 0 1 N N N N N N 29.897 41.264 29.662 -16.582 5.371 -9.598 O24 23I 31
23I O22 O22 O 0 1 N N N N N N 36.264 44.331 30.808 -12.807 4.671 -13.887 O22 23I 32
23I N3 N3 N 0 1 N N N N N N 35.414 44.696 32.860 -13.013 6.398 -15.421 N3 23I 33
23I C36 C36 C 0 1 N N N N N N 36.171 48.395 33.264 -14.432 4.901 -17.311 C36 23I 34
23I C37 C37 C 0 1 N N N N N N 37.517 42.518 33.361 -10.477 7.722 -14.528 C37 23I 35
23I C38 C38 C 0 1 N N N N N N 38.861 41.781 33.542 -9.798 6.598 -13.719 C38 23I 36
23I C39 C39 C 0 1 N N N N N N 38.781 40.405 32.830 -8.444 6.247 -14.342 C39 23I 37
23I O31 O31 O 0 1 N N N N N N 36.341 43.287 35.285 -11.329 8.440 -16.682 O31 23I 38
23I O32 O32 O 0 1 N N N N N N 39.958 43.121 31.859 -9.396 8.161 -11.908 O32 23I 39
23I N4 N4 N 0 1 N N N N N N 41.160 42.634 33.706 -9.617 5.906 -11.403 N4 23I 40
23I C41 C41 C 0 1 N N N N N N 42.403 43.340 33.269 -9.460 6.022 -9.971 C41 23I 41
23I C42 C42 C 0 1 N N N N N N 43.392 43.455 34.506 -10.687 5.511 -9.185 C42 23I 42
23I C43 C43 C 0 1 N N N N N N 44.552 44.441 34.237 -11.981 6.251 -9.542 C43 23I 43
23I C44 C44 C 0 1 N N N N N N 44.060 42.115 34.958 -10.878 4.004 -9.382 C44 23I 44
23I C45 C45 C 0 1 N N N N N N 42.960 42.559 32.014 -8.177 5.294 -9.575 C45 23I 45
23I N5 N5 N 0 1 N N N N N N 43.579 43.286 31.061 -7.850 5.497 -8.242 N5 23I 46
23I C51 C51 C 0 1 N N N N N N 44.147 42.703 29.826 -6.661 4.948 -7.631 C51 23I 47
23I C53 C53 C 0 1 N N N N N N 45.302 43.611 29.395 -6.940 4.669 -6.161 C53 23I 48
23I C52 C52 C 0 1 N N N N N N 43.053 42.659 28.758 -5.515 5.933 -7.810 C52 23I 49
23I H11 H11 H 0 1 N N N N N N 26.775 46.168 33.776 -13.518 10.963 -13.554 H11 23I 50
23I H12 H12 H 0 1 N N N N N N 25.307 44.591 35.010 -11.743 12.344 -12.526 H12 23I 51
23I H13 H13 H 0 1 N N N N N N 26.279 43.054 36.717 -12.328 14.442 -11.338 H13 23I 52
23I H14 H14 H 0 1 N N N N N N 28.732 43.069 37.178 -14.698 15.158 -11.180 H14 23I 53
23I H15 H15 H 0 1 N N N N N N 30.218 44.648 35.939 -16.481 13.785 -12.204 H15 23I 54
23I H201 1H20 H 0 0 N N N N N N 28.443 42.556 27.712 -16.393 1.963 -9.941 H201 23I 55
23I H202 2H20 H 0 0 N N N N N N 29.816 43.341 26.861 -15.509 2.875 -11.207 H202 23I 56
23I H203 3H20 H 0 0 N N N N N N 29.175 41.769 26.273 -15.157 3.176 -9.475 H203 23I 57
23I H24 H24 H 0 1 N N N N N N 30.233 43.893 29.662 -18.100 6.988 -12.172 H24 23I 58
23I H31 H31 H 0 1 N N N N N N 37.504 45.165 32.824 -11.335 5.272 -15.629 H31 23I 59
23I H32 H32 H 0 1 N N N N N N 38.209 44.040 34.744 -9.862 7.052 -16.498 H32 23I 60
23I H331 1H33 H 0 0 N N N N N N 36.010 45.777 35.404 -12.478 6.677 -18.108 H331 23I 61
23I H332 2H33 H 0 0 N N N N N N 37.393 46.682 34.576 -11.104 5.578 -18.107 H332 23I 62
23I H34 H34 H 0 1 N N N N N N 34.835 46.708 33.134 -13.089 4.400 -18.904 H34 23I 63
23I H351 1H35 H 0 0 N N N N N N 35.108 47.853 35.932 -12.387 3.505 -16.062 H351 23I 64
23I H352 2H35 H 0 0 N N N N N N 34.103 48.697 34.706 -13.121 2.499 -17.323 H352 23I 65
23I H353 3H35 H 0 0 N N N N N N 33.714 47.008 35.177 -11.476 3.112 -17.531 H353 23I 66
23I H17 H17 H 0 1 N N N N N N 28.761 47.104 33.360 -17.118 11.581 -12.995 H17 23I 67
23I H181 1H18 H 0 0 N N N N N N 30.501 47.051 35.817 -16.237 11.026 -15.700 H181 23I 68
23I H182 2H18 H 0 0 N N N N N N 31.262 47.734 34.341 -17.533 12.101 -15.142 H182 23I 69
23I H183 3H18 H 0 0 N N N N N N 29.738 48.443 34.976 -15.894 12.724 -15.322 H183 23I 70
23I HN21 HN21 H 0 0 N N N N N N 31.277 45.460 33.607 -14.898 9.788 -13.456 HN21 23I 71
23I H26 H26 H 0 1 N N N N N N 34.440 42.872 29.484 -15.115 4.013 -13.023 H26 23I 72
23I H28 H28 H 0 1 N N N N N N 32.995 45.570 32.494 -14.555 8.064 -14.356 H28 23I 73
23I H291 1H29 H 0 0 N N N N N N 32.975 41.294 26.643 -17.302 2.366 -12.412 H291 23I 74
23I H292 2H29 H 0 0 N N N N N N 34.117 42.014 27.827 -17.859 3.444 -13.711 H292 23I 75
23I H293 3H29 H 0 0 N N N N N N 33.142 40.575 28.280 -18.967 2.989 -12.398 H293 23I 76
23I HN3 HN3 H 0 1 N N N N N N 34.582 44.742 33.413 -13.607 7.136 -15.783 HN3 23I 77
23I H361 1H36 H 0 0 N N N N N N 36.347 49.172 34.022 -14.415 5.196 -16.257 H361 23I 78
23I H362 2H36 H 0 0 N N N N N N 37.135 48.053 32.859 -15.068 4.014 -17.403 H362 23I 79
23I H363 3H36 H 0 0 N N N N N N 35.558 48.809 32.450 -14.914 5.701 -17.882 H363 23I 80
23I H371 1H37 H 0 0 N N N N N N 36.717 41.785 33.542 -9.845 8.617 -14.512 H371 23I 81
23I H372 2H37 H 0 0 N N N N N N 37.545 42.938 32.345 -11.416 7.980 -14.021 H372 23I 82
23I H38 H38 H 0 1 N N N N N N 39.037 41.657 34.621 -10.429 5.701 -13.745 H38 23I 83
23I H391 1H39 H 0 0 N N N N N N 38.762 40.556 31.741 -7.630 6.383 -13.621 H391 23I 84
23I H392 2H39 H 0 0 N N N N N N 39.659 39.800 33.101 -8.428 5.207 -14.684 H392 23I 85
23I H393 3H39 H 0 0 N N N N N N 37.865 39.883 33.144 -8.227 6.885 -15.206 H393 23I 86
23I HO31 HO31 H 0 0 N N N N N N 36.792 43.191 36.115 -11.359 9.168 -16.045 HO31 23I 87
23I HN4 HN4 H 0 1 N N N N N N 41.160 42.179 34.596 -9.788 4.980 -11.783 HN4 23I 88
23I H41 H41 H 0 1 N N N N N N 42.236 44.379 32.947 -9.312 7.090 -9.769 H41 23I 89
23I H42 H42 H 0 1 N N N N N N 42.724 43.806 35.306 -10.505 5.676 -8.115 H42 23I 90
23I H431 1H43 H 0 0 N N N N N N 44.593 44.675 33.163 -11.886 7.326 -9.361 H431 23I 91
23I H432 2H43 H 0 0 N N N N N N 44.386 45.367 34.808 -12.256 6.103 -10.591 H432 23I 92
23I H433 3H43 H 0 0 N N N N N N 45.502 43.983 34.549 -12.811 5.888 -8.927 H433 23I 93
23I H441 1H44 H 0 0 N N N N N N 44.217 41.469 34.082 -9.972 3.457 -9.101 H441 23I 94
23I H442 2H44 H 0 0 N N N N N N 45.029 42.330 35.433 -11.697 3.634 -8.755 H442 23I 95
23I H443 3H44 H 0 0 N N N N N N 43.404 41.603 35.678 -11.117 3.760 -10.422 H443 23I 96
23I HN5 HN5 H 0 1 N N N N N N 43.658 44.274 31.197 -8.451 6.076 -7.664 HN5 23I 97
23I H51 H51 H 0 1 N N N N N N 44.516 41.678 29.981 -6.420 4.010 -8.143 H51 23I 98
23I H531 1H53 H 0 0 N N N N N N 45.216 43.829 28.320 -6.061 4.236 -5.673 H531 23I 99
23I H532 2H53 H 0 0 N N N N N N 45.261 44.552 29.964 -7.211 5.585 -5.625 H532 23I 100
23I H533 3H53 H 0 0 N N N N N N 46.259 43.105 29.591 -7.771 3.965 -6.050 H533 23I 101
23I H521 1H52 H 0 0 N N N N N N 42.066 42.648 29.244 -5.334 6.128 -8.873 H521 23I 102
23I H522 2H52 H 0 0 N N N N N N 43.135 43.546 28.113 -4.591 5.539 -7.376 H522 23I 103
23I H523 3H52 H 0 0 N N N N N N 43.172 41.750 28.149 -5.734 6.894 -7.332 H523 23I 104
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
23I O4 C45 DOUB N N 1
23I C11 C16 DOUB Y N 2
23I C11 C12 SING Y N 3
23I C11 H11 SING N N 4
23I C12 C13 DOUB Y N 5
23I C12 H12 SING N N 6
23I C13 C14 SING Y N 7
23I C13 H13 SING N N 8
23I C14 C15 DOUB Y N 9
23I C14 H14 SING N N 10
23I C15 C16 SING Y N 11
23I C15 H15 SING N N 12
23I C16 C17 SING N N 13
23I C20 S2 SING N N 14
23I C20 H201 SING N N 15
23I C20 H202 SING N N 16
23I C20 H203 SING N N 17
23I C21 C23 SING N N 18
23I C21 O21 DOUB N N 19
23I C21 N21 SING N N 20
23I C22 O22 DOUB N N 21
23I C22 C27 SING N N 22
23I C22 N3 SING N N 23
23I C24 C25 SING Y N 24
23I C24 C23 DOUB Y N 25
23I C24 H24 SING N N 26
23I C27 C26 SING Y N 27
23I C27 C28 DOUB Y N 28
23I C30 O32 DOUB N N 29
23I C30 C38 SING N N 30
23I C30 N4 SING N N 31
23I C31 N3 SING N N 32
23I C31 C32 SING N N 33
23I C31 C33 SING N N 34
23I C31 H31 SING N N 35
23I C32 C37 SING N N 36
23I C32 O31 SING N N 37
23I C32 H32 SING N N 38
23I C33 C34 SING N N 39
23I C33 H331 SING N N 40
23I C33 H332 SING N N 41
23I C34 C36 SING N N 42
23I C34 C35 SING N N 43
23I C34 H34 SING N N 44
23I C35 H351 SING N N 45
23I C35 H352 SING N N 46
23I C35 H353 SING N N 47
23I C17 N21 SING N N 48
23I C17 C18 SING N N 49
23I C17 H17 SING N N 50
23I C18 H181 SING N N 51
23I C18 H182 SING N N 52
23I C18 H183 SING N N 53
23I N21 HN21 SING N N 54
23I C23 C28 SING Y N 55
23I C25 N22 SING N N 56
23I C25 C26 DOUB Y N 57
23I C26 H26 SING N N 58
23I C28 H28 SING N N 59
23I N22 C29 SING N N 60
23I N22 S2 SING N N 61
23I C29 H291 SING N N 62
23I C29 H292 SING N N 63
23I C29 H293 SING N N 64
23I S2 O23 DOUB N N 65
23I S2 O24 DOUB N N 66
23I N3 HN3 SING N N 67
23I C36 H361 SING N N 68
23I C36 H362 SING N N 69
23I C36 H363 SING N N 70
23I C37 C38 SING N N 71
23I C37 H371 SING N N 72
23I C37 H372 SING N N 73
23I C38 C39 SING N N 74
23I C38 H38 SING N N 75
23I C39 H391 SING N N 76
23I C39 H392 SING N N 77
23I C39 H393 SING N N 78
23I O31 HO31 SING N N 79
23I N4 C41 SING N N 80
23I N4 HN4 SING N N 81
23I C41 C45 SING N N 82
23I C41 C42 SING N N 83
23I C41 H41 SING N N 84
23I C42 C43 SING N N 85
23I C42 C44 SING N N 86
23I C42 H42 SING N N 87
23I C43 H431 SING N N 88
23I C43 H432 SING N N 89
23I C43 H433 SING N N 90
23I C44 H441 SING N N 91
23I C44 H442 SING N N 92
23I C44 H443 SING N N 93
23I C45 N5 SING N N 94
23I N5 C51 SING N N 95
23I N5 HN5 SING N N 96
23I C51 C52 SING N N 97
23I C51 C53 SING N N 98
23I C51 H51 SING N N 99
23I C53 H531 SING N N 100
23I C53 H532 SING N N 101
23I C53 H533 SING N N 102
23I C52 H521 SING N N 103
23I C52 H522 SING N N 104
23I C52 H523 SING N N 105
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
23I SMILES ACDLabs 10.04 O=S(=O)(N(c1cc(cc(c1)C(=O)NC(c2ccccc2)C)C(=O)NC(CC(C)C)C(O)CC(C(=O)NC(C(=O)NC(C)C)C(C)C)C)C)C
23I SMILES_CANONICAL CACTVS 3.341 CC(C)C[C@H](NC(=O)c1cc(cc(c1)C(=O)N[C@H](C)c2ccccc2)N(C)[S](C)(=O)=O)[C@@H](O)C[C@@H](C)C(=O)N[C@@H](C(C)C)C(=O)NC(C)C
23I SMILES CACTVS 3.341 CC(C)C[CH](NC(=O)c1cc(cc(c1)C(=O)N[CH](C)c2ccccc2)N(C)[S](C)(=O)=O)[CH](O)C[CH](C)C(=O)N[CH](C(C)C)C(=O)NC(C)C
23I SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CC(C)C[C@@H]([C@H](C[C@@H](C)C(=O)N[C@@H](C(C)C)C(=O)NC(C)C)O)NC(=O)c1cc(cc(c1)[N@@](C)S(=O)(=O)C)C(=O)N[C@H](C)c2ccccc2
23I SMILES "OpenEye OEToolkits" 1.5.0 CC(C)CC(C(CC(C)C(=O)NC(C(C)C)C(=O)NC(C)C)O)NC(=O)c1cc(cc(c1)N(C)S(=O)(=O)C)C(=O)NC(C)c2ccccc2
23I InChI InChI 1.03 InChI=1S/C36H55N5O7S/c1-21(2)16-30(31(42)17-24(7)33(43)40-32(22(3)4)36(46)37-23(5)6)39-35(45)28-18-27(19-29(20-28)41(9)49(10,47)48)34(44)38-25(8)26-14-12-11-13-15-26/h11-15,18-25,30-32,42H,16-17H2,1-10H3,(H,37,46)(H,38,44)(H,39,45)(H,40,43)/t24-,25-,30+,31+,32+/m1/s1
23I InChIKey InChI 1.03 BJOCXJJVELLFKM-LLWRDSBASA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
23I "SYSTEMATIC NAME" ACDLabs 10.04 "N-[(1S,2S,4R)-2-hydroxy-4-methyl-5-({(1S)-2-methyl-1-[(1-methylethyl)carbamoyl]propyl}amino)-1-(2-methylpropyl)-5-oxopentyl]-5-[methyl(methylsulfonyl)amino]-N'-[(1R)-1-phenylethyl]benzene-1,3-dicarboxamide"
23I "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "N-[(4S,5S,7R)-5-hydroxy-2,7-dimethyl-8-[[(2S)-3-methyl-1-oxo-1-(propan-2-ylamino)butan-2-yl]amino]-8-oxo-octan-4-yl]-5-(methyl-methylsulfonyl-amino)-N'-[(1R)-1-phenylethyl]benzene-1,3-dicarboxamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
23I 'Create component' 2007-04-13 RCSB
23I 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_synonyms.comp_id 23I
_pdbe_chem_comp_synonyms.name GRL-7234
_pdbe_chem_comp_synonyms.provenance ChEMBL
_pdbe_chem_comp_synonyms.type 'Research Code'
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
23I O4 O 6.897 2.350 1
23I C11 C 23.785 -4.399 2
23I C12 C 23.785 -5.899 3
23I C13 C 25.084 -6.649 4
23I C14 C 26.383 -5.899 5
23I C15 C 26.383 -4.399 6
23I C16 C 25.084 -3.650 7
23I C20 C 21.736 6.649 8
23I C21 C 23.785 0.101 9
23I C22 C 18.588 0.101 10
23I C24 C 22.486 2.350 11
23I C27 C 19.887 0.851 12
23I C30 C 10.794 0.101 13
23I C31 C 15.990 0.101 14
23I C32 C 14.691 0.851 15
23I C33 C 15.990 -1.399 16
23I C34 C 14.691 -2.150 17
23I C35 C 13.392 -1.399 18
23I C17 C 25.084 -2.150 19
23I C18 C 26.383 -1.399 20
23I N21 N 23.785 -1.399 21
23I O21 O 25.084 0.851 22
23I C23 C 22.486 0.851 23
23I C25 C 21.187 3.100 24
23I C26 C 19.887 2.350 25
23I C28 C 21.187 0.101 26
23I N22 N 21.187 4.601 27
23I C29 C 19.887 5.351 28
23I S2 S 22.486 5.351 29
23I O23 O 23.236 4.051 30
23I O24 O 23.785 6.101 31
23I O22 O 18.588 -1.399 32
23I N3 N 17.290 0.851 33
23I C36 C 14.691 -3.650 34
23I C37 C 13.392 0.101 35
23I C38 C 12.093 0.851 36
23I C39 C 12.093 2.350 37
23I O31 O 14.691 2.350 38
23I O32 O 10.794 -1.399 39
23I N4 N 9.495 0.851 40
23I C41 C 8.196 0.101 41
23I C42 C 8.196 -1.399 42
23I C43 C 6.897 -2.150 43
23I C44 C 9.495 -2.150 44
23I C45 C 6.897 0.851 45
23I N5 N 5.598 0.101 46
23I C51 C 4.299 0.851 47
23I C53 C 4.299 2.350 48
23I C52 C 3.000 0.101 49
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
23I O4 C45 DOUBLE NONE 1
23I C11 C16 DOUBLE NONE 2
23I C11 C12 SINGLE NONE 3
23I C12 C13 DOUBLE NONE 4
23I C13 C14 SINGLE NONE 5
23I C14 C15 DOUBLE NONE 6
23I C15 C16 SINGLE NONE 7
23I C16 C17 SINGLE NONE 8
23I C20 S2 SINGLE NONE 9
23I C21 C23 SINGLE NONE 10
23I C21 O21 DOUBLE NONE 11
23I C21 N21 SINGLE NONE 12
23I C22 O22 DOUBLE NONE 13
23I C22 C27 SINGLE NONE 14
23I C22 N3 SINGLE NONE 15
23I C24 C25 DOUBLE NONE 16
23I C24 C23 SINGLE NONE 17
23I C27 C26 DOUBLE NONE 18
23I C27 C28 SINGLE NONE 19
23I C30 O32 DOUBLE NONE 20
23I C30 C38 SINGLE NONE 21
23I C30 N4 SINGLE NONE 22
23I C31 N3 SINGLE NONE 23
23I C31 C32 SINGLE NONE 24
23I C31 C33 SINGLE BEGINWEDGE 25
23I C32 C37 SINGLE NONE 26
23I C32 O31 SINGLE BEGINDASH 27
23I C33 C34 SINGLE NONE 28
23I C34 C36 SINGLE NONE 29
23I C34 C35 SINGLE NONE 30
23I C17 N21 SINGLE NONE 31
23I C17 C18 SINGLE BEGINDASH 32
23I C23 C28 DOUBLE NONE 33
23I C25 N22 SINGLE NONE 34
23I C25 C26 SINGLE NONE 35
23I N22 C29 SINGLE NONE 36
23I N22 S2 SINGLE NONE 37
23I S2 O23 DOUBLE NONE 38
23I S2 O24 DOUBLE NONE 39
23I C37 C38 SINGLE NONE 40
23I C38 C39 SINGLE BEGINDASH 41
23I C41 N4 SINGLE BEGINWEDGE 42
23I C41 C45 SINGLE NONE 43
23I C41 C42 SINGLE NONE 44
23I C42 C43 SINGLE NONE 45
23I C42 C44 SINGLE NONE 46
23I C45 N5 SINGLE NONE 47
23I N5 C51 SINGLE NONE 48
23I C51 C52 SINGLE NONE 49
23I C51 C53 SINGLE NONE 50
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
23I MurckoScaffold S1 scaffold O=C(NCc1ccccc1)c1ccccc1 InChI=1S/C14H13NO/c16-14(13-9-5-2-6-10-13)15-11-12-7-3-1-4-8-12/h1-10H,11H2,(H,15,16) LKQUCICFTHBFAL-UHFFFAOYSA-N
23I amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
23I peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
23I phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
23I C11 S1 1
23I C12 S1 1
23I C13 S1 1
23I C14 S1 1
23I C15 S1 1
23I C16 S1 1
23I C21 S1 1
23I C24 S1 1
23I C27 S1 1
23I C17 S1 1
23I N21 S1 1
23I O21 S1 1
23I C23 S1 1
23I C25 S1 1
23I C26 S1 1
23I C28 S1 1
23I N21 F1 1
23I C21 F1 1
23I O21 F1 1
23I C23 F1 1
23I N3 F1 2
23I C22 F1 2
23I O22 F1 2
23I C27 F1 2
23I N4 F1 3
23I C30 F1 3
23I O32 F1 3
23I C38 F1 3
23I N5 F1 4
23I C45 F1 4
23I O4 F1 4
23I C41 F1 4
23I O4 F2 1
23I C45 F2 1
23I C41 F2 1
23I N4 F2 1
23I C11 F3 1
23I C16 F3 1
23I C15 F3 1
23I C14 F3 1
23I C13 F3 1
23I C12 F3 1
23I C24 F3 2
23I C25 F3 2
23I C26 F3 2
23I C27 F3 2
23I C28 F3 2
23I C23 F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id 23I
_pdbe_chem_comp_rdkit_properties.exactmw 701.382
_pdbe_chem_comp_rdkit_properties.amw 701.931
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 28
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 49
_pdbe_chem_comp_rdkit_properties.NumAtoms 104
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 4
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.556
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 369.000
_pdbe_chem_comp_rdkit_properties.tpsa 174.010
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.226
_pdbe_chem_comp_rdkit_properties.CrippenMR 190.934
_pdbe_chem_comp_rdkit_properties.chi0v 24.319
_pdbe_chem_comp_rdkit_properties.chi1v 13.167
_pdbe_chem_comp_rdkit_properties.chi2v 5.212
_pdbe_chem_comp_rdkit_properties.chi3v 5.212
_pdbe_chem_comp_rdkit_properties.chi4v 2.965
_pdbe_chem_comp_rdkit_properties.chi0n 78.502
_pdbe_chem_comp_rdkit_properties.chi1n 38.924
_pdbe_chem_comp_rdkit_properties.chi2n 4.548
_pdbe_chem_comp_rdkit_properties.chi3n 4.548
_pdbe_chem_comp_rdkit_properties.chi4n 2.633
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.970
_pdbe_chem_comp_rdkit_properties.kappa1 8.553
_pdbe_chem_comp_rdkit_properties.kappa2 18.145
_pdbe_chem_comp_rdkit_properties.kappa3 12.775
_pdbe_chem_comp_rdkit_properties.Phi 3.167
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
23I UniChem ChEMBL CHEMBL387771
23I UniChem PDBe 23I
23I UniChem ZINC ZINC000024819086
23I UniChem fdasrs PB4B4XG4XX
23I UniChem 'PubChem TPHARMA' 26519125
23I UniChem BindingDb 16259
23I UniChem PubChem 16659106
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
23I O4 7.752 1.184 -0.441 ETKDGv3 1
23I C11 -7.491 1.244 4.019 ETKDGv3 2
23I C12 -7.523 2.713 4.178 ETKDGv3 3
23I C13 -7.716 3.500 3.113 ETKDGv3 4
23I C14 -7.901 2.901 1.776 ETKDGv3 5
23I C15 -7.871 1.571 1.627 ETKDGv3 6
23I C16 -7.645 0.688 2.803 ETKDGv3 7
23I C20 -7.277 -5.312 -1.989 ETKDGv3 8
23I C21 -5.342 -1.106 1.575 ETKDGv3 9
23I C22 -1.081 -0.905 -1.090 ETKDGv3 10
23I C24 -4.973 -2.646 -0.457 ETKDGv3 11
23I C27 -2.416 -1.509 -0.866 ETKDGv3 12
23I C30 4.661 1.568 0.738 ETKDGv3 13
23I C31 0.517 1.060 -0.832 ETKDGv3 14
23I C32 0.825 2.116 0.288 ETKDGv3 15
23I C33 0.706 1.614 -2.278 ETKDGv3 16
23I C34 -0.456 2.401 -2.950 ETKDGv3 17
23I C35 -0.956 3.597 -2.133 ETKDGv3 18
23I C17 -7.629 -0.816 2.635 ETKDGv3 19
23I C18 -9.054 -1.338 2.427 ETKDGv3 20
23I N21 -6.774 -1.191 1.504 ETKDGv3 21
23I O21 -4.797 -0.610 2.600 ETKDGv3 22
23I C23 -4.494 -1.575 0.452 ETKDGv3 23
23I C25 -4.203 -3.092 -1.465 ETKDGv3 24
23I C26 -2.866 -2.485 -1.675 ETKDGv3 25
23I C28 -3.270 -1.053 0.260 ETKDGv3 26
23I N22 -4.677 -4.127 -2.351 ETKDGv3 27
23I C29 -4.457 -4.014 -3.792 ETKDGv3 28
23I S2 -5.527 -5.518 -1.738 ETKDGv3 29
23I O23 -5.245 -5.691 -0.272 ETKDGv3 30
23I O24 -5.059 -6.749 -2.463 ETKDGv3 31
23I O22 -0.188 -1.572 -1.682 ETKDGv3 32
23I N3 -0.805 0.442 -0.669 ETKDGv3 33
23I C36 -1.624 1.512 -3.408 ETKDGv3 34
23I C37 2.200 1.881 0.965 ETKDGv3 35
23I C38 3.427 2.094 0.048 ETKDGv3 36
23I C39 3.625 3.571 -0.328 ETKDGv3 37
23I O31 -0.163 2.065 1.290 ETKDGv3 38
23I O32 5.165 2.213 1.699 ETKDGv3 39
23I N4 5.232 0.312 0.336 ETKDGv3 40
23I C41 6.434 -0.238 0.976 ETKDGv3 41
23I C42 6.675 -1.713 0.546 ETKDGv3 42
23I C43 7.707 -2.402 1.452 ETKDGv3 43
23I C44 7.092 -1.858 -0.929 ETKDGv3 44
23I C45 7.630 0.641 0.691 ETKDGv3 45
23I N5 8.638 0.832 1.695 ETKDGv3 46
23I C51 9.890 1.542 1.420 ETKDGv3 47
23I C53 10.826 0.652 0.596 ETKDGv3 48
23I C52 10.565 1.957 2.732 ETKDGv3 49
23I H11 -7.341 0.628 4.897 ETKDGv3 50
23I H12 -7.391 3.151 5.159 ETKDGv3 51
23I H13 -7.740 4.576 3.229 ETKDGv3 52
23I H14 -8.063 3.540 0.918 ETKDGv3 53
23I H15 -8.011 1.141 0.643 ETKDGv3 54
23I H201 -7.632 -4.412 -1.448 ETKDGv3 55
23I H202 -7.484 -5.193 -3.073 ETKDGv3 56
23I H203 -7.813 -6.206 -1.608 ETKDGv3 57
23I H24 -5.950 -3.079 -0.298 ETKDGv3 58
23I H31 1.268 0.247 -0.720 ETKDGv3 59
23I H32 0.825 3.135 -0.147 ETKDGv3 60
23I H331 1.605 2.263 -2.299 ETKDGv3 61
23I H332 0.959 0.757 -2.939 ETKDGv3 62
23I H34 -0.023 2.826 -3.884 ETKDGv3 63
23I H351 -1.721 4.157 -2.712 ETKDGv3 64
23I H352 -1.416 3.270 -1.179 ETKDGv3 65
23I H353 -0.117 4.294 -1.924 ETKDGv3 66
23I H17 -7.231 -1.307 3.552 ETKDGv3 67
23I H181 -9.507 -0.896 1.514 ETKDGv3 68
23I H182 -9.038 -2.443 2.319 ETKDGv3 69
23I H183 -9.686 -1.080 3.304 ETKDGv3 70
23I HN21 -7.225 -1.442 0.595 ETKDGv3 71
23I H26 -2.251 -2.836 -2.493 ETKDGv3 72
23I H28 -2.896 -0.294 0.935 ETKDGv3 73
23I H291 -4.758 -3.003 -4.141 ETKDGv3 74
23I H292 -5.062 -4.764 -4.344 ETKDGv3 75
23I H293 -3.388 -4.187 -4.029 ETKDGv3 76
23I HN3 -1.607 1.044 -0.378 ETKDGv3 77
23I H361 -2.315 1.272 -2.576 ETKDGv3 78
23I H362 -1.250 0.568 -3.858 ETKDGv3 79
23I H363 -2.217 2.046 -4.181 ETKDGv3 80
23I H371 2.290 2.561 1.842 ETKDGv3 81
23I H372 2.216 0.844 1.369 ETKDGv3 82
23I H38 3.293 1.520 -0.891 ETKDGv3 83
23I H391 3.675 4.208 0.581 ETKDGv3 84
23I H392 4.568 3.693 -0.902 ETKDGv3 85
23I H393 2.797 3.931 -0.971 ETKDGv3 86
23I HO31 -0.141 2.934 1.770 ETKDGv3 87
23I HN4 4.727 -0.248 -0.387 ETKDGv3 88
23I H41 6.250 -0.236 2.074 ETKDGv3 89
23I H42 5.716 -2.262 0.678 ETKDGv3 90
23I H431 7.400 -2.324 2.517 ETKDGv3 91
23I H432 7.782 -3.480 1.194 ETKDGv3 92
23I H433 8.711 -1.941 1.332 ETKDGv3 93
23I H441 7.114 -2.932 -1.211 ETKDGv3 94
23I H442 8.104 -1.434 -1.101 ETKDGv3 95
23I H443 6.371 -1.346 -1.600 ETKDGv3 96
23I HN5 8.471 0.436 2.648 ETKDGv3 97
23I H51 9.670 2.468 0.845 ETKDGv3 98
23I H531 10.353 0.391 -0.374 ETKDGv3 99
23I H532 11.051 -0.287 1.145 ETKDGv3 100
23I H533 11.777 1.186 0.385 ETKDGv3 101
23I H521 11.491 2.532 2.522 ETKDGv3 102
23I H522 10.825 1.063 3.338 ETKDGv3 103
23I H523 9.879 2.602 3.321 ETKDGv3 104
#