data_32H
#
_chem_comp.id 32H
_chem_comp.name 2-bromo-3-(4-bromophenyl)-4-hydroxy-6-oxo-6,7-dihydrothieno[2,3-b]pyridine-5-carbonitrile
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C14 H6 Br2 N2 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms Br2-A769662core
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-05-23
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 426.083
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 32H
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4QFS
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
32H C4 C4 C 0 1 Y N N N N N 47.202 -82.291 -40.489 2.355 0.984 -1.079 C4 32H 1
32H N2 N2 N 0 1 N N N N N N 40.041 -82.332 -39.297 -3.343 4.835 0.089 N2 32H 2
32H C7 C7 C 0 1 Y N N N N N 45.245 -79.220 -39.519 -0.828 -0.706 -0.012 C7 32H 3
32H C6 C6 C 0 1 Y N N N N N 46.257 -80.304 -39.504 0.568 -0.209 -0.007 C6 32H 4
32H C9 C9 C 0 1 N N N N N N 42.920 -80.481 -39.461 -2.016 1.609 0.030 C9 32H 5
32H C13 C13 C 0 1 Y N N N N N 45.607 -77.936 -39.589 -1.132 -2.001 -0.028 C13 32H 6
32H C8 C8 C 0 1 Y N N N N N 43.799 -79.336 -39.511 -1.986 0.187 0.006 C8 32H 7
32H C1 C1 C 0 1 Y N N N N N 47.309 -80.282 -38.593 1.401 -0.473 1.080 C1 32H 8
32H C2 C2 C 0 1 Y N N N N N 48.308 -81.237 -38.640 2.701 -0.009 1.079 C2 32H 9
32H C3 C3 C 0 1 Y N N N N N 48.245 -82.224 -39.595 3.178 0.718 0.002 C3 32H 10
32H C5 C5 C 0 1 Y N N N N N 46.209 -81.330 -40.440 1.054 0.524 -1.089 C5 32H 11
32H C10 C10 C 0 1 N N N N N N 41.556 -80.254 -39.459 -3.246 2.269 0.044 C10 32H 12
32H C11 C11 C 0 1 N N N N N N 40.944 -78.933 -39.518 -4.439 1.508 0.034 C11 32H 13
32H O1 O1 O 0 1 N N N N N N 39.740 -78.694 -39.488 -5.520 2.072 0.047 O1 32H 14
32H N1 N1 N 0 1 N N N N N N 41.840 -77.888 -39.582 -4.384 0.168 0.011 N1 32H 15
32H C12 C12 C 0 1 Y N N N N N 43.192 -78.091 -39.575 -3.182 -0.509 -0.003 C12 32H 16
32H S1 S1 S 0 1 Y N N N N N 44.324 -76.808 -39.655 -2.868 -2.242 -0.022 S1 32H 17
32H BR1 BR1 BR 0 0 N N N N N N 47.328 -77.225 -39.623 0.141 -3.399 -0.054 BR1 32H 18
32H C14 C14 C 0 1 N N N N N N 40.682 -81.385 -39.371 -3.300 3.700 0.069 C14 32H 19
32H O2 O2 O 0 1 N N N N N N 43.470 -81.709 -39.431 -0.863 2.315 0.039 O2 32H 20
32H BR2 BR2 BR 0 0 N N N N N N 49.639 -83.502 -39.702 4.959 1.352 0.009 BR2 32H 21
32H H1 H1 H 0 1 N N N N N N 47.159 -83.085 -41.220 2.731 1.556 -1.915 H1 32H 22
32H H2 H2 H 0 1 N N N N N N 47.346 -79.509 -37.840 1.030 -1.040 1.921 H2 32H 23
32H H3 H3 H 0 1 N N N N N N 49.127 -81.208 -37.936 3.346 -0.213 1.920 H3 32H 24
32H H4 H4 H 0 1 N N N N N N 45.386 -81.377 -41.138 0.414 0.732 -1.933 H4 32H 25
32H H5 H5 H 0 1 N N N N N N 41.491 -76.953 -39.635 -5.211 -0.339 0.005 H5 32H 26
32H H6 H6 H 0 1 N N N N N N 42.782 -82.364 -39.399 -0.988 3.273 0.056 H6 32H 27
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
32H C4 C5 DOUB Y N 1
32H C4 C3 SING Y N 2
32H C5 C6 SING Y N 3
32H BR2 C3 SING N N 4
32H S1 C13 SING Y N 5
32H S1 C12 SING Y N 6
32H BR1 C13 SING N N 7
32H C3 C2 DOUB Y N 8
32H C13 C7 DOUB Y N 9
32H N1 C12 SING N N 10
32H N1 C11 SING N N 11
32H C12 C8 DOUB Y N 12
32H C7 C8 SING Y N 13
32H C7 C6 SING N N 14
32H C11 O1 DOUB N N 15
32H C11 C10 SING N N 16
32H C8 C9 SING N N 17
32H C6 C1 DOUB Y N 18
32H C9 C10 DOUB N N 19
32H C9 O2 SING N N 20
32H C10 C14 SING N N 21
32H C14 N2 TRIP N N 22
32H C2 C1 SING Y N 23
32H C4 H1 SING N N 24
32H C1 H2 SING N N 25
32H C2 H3 SING N N 26
32H C5 H4 SING N N 27
32H N1 H5 SING N N 28
32H O2 H6 SING N N 29
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
32H SMILES ACDLabs 12.01 "Brc3ccc(c1c2C(O)=C(C#N)C(=O)Nc2sc1Br)cc3"
32H InChI InChI 1.03 InChI=1S/C14H6Br2N2O2S/c15-7-3-1-6(2-4-7)9-10-11(19)8(5-17)13(20)18-14(10)21-12(9)16/h1-4H,(H2,18,19,20)
32H InChIKey InChI 1.03 BLJQBTCHXOTSEZ-UHFFFAOYSA-N
32H SMILES_CANONICAL CACTVS 3.385 "OC1=C(C#N)C(=O)Nc2sc(Br)c(c3ccc(Br)cc3)c12"
32H SMILES CACTVS 3.385 "OC1=C(C#N)C(=O)Nc2sc(Br)c(c3ccc(Br)cc3)c12"
32H SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1c2c3c(sc2Br)NC(=O)C(=C3O)C#N)Br"
32H SMILES "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1c2c3c(sc2Br)NC(=O)C(=C3O)C#N)Br"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
32H "SYSTEMATIC NAME" ACDLabs 12.01 2-bromo-3-(4-bromophenyl)-4-hydroxy-6-oxo-6,7-dihydrothieno[2,3-b]pyridine-5-carbonitrile
32H "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 2-bromanyl-3-(4-bromophenyl)-4-oxidanyl-6-oxidanylidene-7H-thieno[2,3-b]pyridine-5-carbonitrile
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
32H 'Create component' 2014-05-23 RCSB
32H 'Modify synonyms' 2014-07-07 RCSB
32H 'Initial release' 2014-08-06 RCSB
32H 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 32H
_pdbx_chem_comp_synonyms.name Br2-A769662core
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 32H
_pdbe_chem_comp_synonyms.name Br2-A769662core
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
32H C4 C 12.015 2.128 1
32H N2 N 3.000 0.010 2
32H C7 C 9.616 -1.033 3
32H C6 C 10.082 0.393 4
32H C9 C 6.897 -0.740 5
32H C13 C 10.491 -2.240 6
32H C8 C 8.196 -1.490 7
32H C1 C 9.080 1.509 8
32H C2 C 9.546 2.935 9
32H C3 C 11.013 3.244 10
32H C5 C 11.549 0.702 11
32H C10 C 5.598 -1.490 12
32H C11 C 5.598 -2.990 13
32H O1 O 4.299 -3.740 14
32H N1 N 6.897 -3.740 15
32H C12 C 8.196 -2.990 16
32H S1 S 9.616 -3.447 17
32H BR1 Br 11.991 -2.240 18
32H C14 C 4.299 -0.740 19
32H O2 O 6.897 0.760 20
32H BR2 Br 11.479 4.670 21
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
32H C4 C5 DOUBLE NONE 1
32H C4 C3 SINGLE NONE 2
32H C5 C6 SINGLE NONE 3
32H BR2 C3 SINGLE NONE 4
32H S1 C13 SINGLE NONE 5
32H S1 C12 SINGLE NONE 6
32H BR1 C13 SINGLE NONE 7
32H C3 C2 DOUBLE NONE 8
32H C13 C7 DOUBLE NONE 9
32H N1 C12 SINGLE NONE 10
32H N1 C11 SINGLE NONE 11
32H C12 C8 DOUBLE NONE 12
32H C7 C8 SINGLE NONE 13
32H C7 C6 SINGLE NONE 14
32H C11 O1 DOUBLE NONE 15
32H C11 C10 SINGLE NONE 16
32H C8 C9 SINGLE NONE 17
32H C6 C1 DOUBLE NONE 18
32H C9 C10 DOUBLE NONE 19
32H C9 O2 SINGLE NONE 20
32H C10 C14 SINGLE NONE 21
32H C14 N2 TRIPLE NONE 22
32H C2 C1 SINGLE NONE 23
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
32H MurckoScaffold S1 scaffold 'O=c1ccc2c(-c3ccccc3)csc2[nH]1' InChI=1S/C13H9NOS/c15-12-7-6-10-11(8-16-13(10)14-12)9-4-2-1-3-5-9/h1-8H,(H,14,15) OGRGNVLUFRMEAM-UHFFFAOYSA-N
32H phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
32H pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
32H thiophen F3 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
32H C4 S1 1
32H C7 S1 1
32H C6 S1 1
32H C9 S1 1
32H C13 S1 1
32H C8 S1 1
32H C1 S1 1
32H C2 S1 1
32H C3 S1 1
32H C5 S1 1
32H C10 S1 1
32H C11 S1 1
32H O1 S1 1
32H N1 S1 1
32H C12 S1 1
32H S1 S1 1
32H C4 F1 1
32H C5 F1 1
32H C6 F1 1
32H C1 F1 1
32H C2 F1 1
32H C3 F1 1
32H C11 F2 1
32H C10 F2 1
32H C9 F2 1
32H C8 F2 1
32H C12 F2 1
32H N1 F2 1
32H C13 F3 1
32H C7 F3 1
32H C8 F3 1
32H C12 F3 1
32H S1 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 32H
_pdbe_chem_comp_rdkit_properties.exactmw 423.852
_pdbe_chem_comp_rdkit_properties.amw 426.089
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 2
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 21
_pdbe_chem_comp_rdkit_properties.NumAtoms 27
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 148.053
_pdbe_chem_comp_rdkit_properties.tpsa 76.880
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.933
_pdbe_chem_comp_rdkit_properties.CrippenMR 85.366
_pdbe_chem_comp_rdkit_properties.chi0v 13.864
_pdbe_chem_comp_rdkit_properties.chi1v 7.768
_pdbe_chem_comp_rdkit_properties.chi2v 4.825
_pdbe_chem_comp_rdkit_properties.chi3v 4.825
_pdbe_chem_comp_rdkit_properties.chi4v 3.752
_pdbe_chem_comp_rdkit_properties.chi0n 15.875
_pdbe_chem_comp_rdkit_properties.chi1n 8.221
_pdbe_chem_comp_rdkit_properties.chi2n 2.674
_pdbe_chem_comp_rdkit_properties.chi3n 2.674
_pdbe_chem_comp_rdkit_properties.chi4n 1.796
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.620
_pdbe_chem_comp_rdkit_properties.kappa1 8.733
_pdbe_chem_comp_rdkit_properties.kappa2 5.295
_pdbe_chem_comp_rdkit_properties.kappa3 2.293
_pdbe_chem_comp_rdkit_properties.Phi 2.202
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
32H UniChem PDBe 32H
32H UniChem ZINC ZINC000098208385
32H UniChem PubChem 76871925
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
32H C4 -3.084 -1.554 1.222 ETKDGv3 1
32H N2 1.514 4.791 0.433 ETKDGv3 2
32H C7 0.108 -1.091 -0.750 ETKDGv3 3
32H C6 -0.802 -1.224 0.402 ETKDGv3 4
32H C9 0.810 1.449 -0.353 ETKDGv3 5
32H C13 0.345 -2.100 -1.601 ETKDGv3 6
32H C8 0.898 0.138 -1.055 ETKDGv3 7
32H C1 -0.324 -1.186 1.657 ETKDGv3 8
32H C2 -1.241 -1.329 2.807 ETKDGv3 9
32H C3 -2.553 -1.504 2.601 ETKDGv3 10
32H C5 -2.255 -1.422 0.179 ETKDGv3 11
32H C10 1.600 2.477 -0.752 ETKDGv3 12
32H C11 2.525 2.292 -1.899 ETKDGv3 13
32H O1 3.274 3.229 -2.283 ETKDGv3 14
32H N1 2.555 1.031 -2.576 ETKDGv3 15
32H C12 1.709 -0.015 -2.100 ETKDGv3 16
32H S1 1.567 -1.633 -2.812 ETKDGv3 17
32H BR1 -0.413 -3.855 -1.508 ETKDGv3 18
32H C14 1.552 3.762 -0.094 ETKDGv3 19
32H O2 -0.101 1.597 0.696 ETKDGv3 20
32H BR2 -3.743 -1.689 4.083 ETKDGv3 21
32H H1 -4.144 -1.696 1.056 ETKDGv3 22
32H H2 0.736 -1.051 1.840 ETKDGv3 23
32H H3 -0.845 -1.292 3.813 ETKDGv3 24
32H H4 -2.650 -1.457 -0.829 ETKDGv3 25
32H H5 3.182 0.876 -3.397 ETKDGv3 26
32H H6 -0.220 2.457 1.216 ETKDGv3 27
#