data_32U
#
_chem_comp.id 32U
_chem_comp.name D-phenylalanyl-N-{4-[amino(iminio)methyl]benzyl}-L-prolinamide
_chem_comp.type peptide-like
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H28 N5 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2007-11-22
_chem_comp.pdbx_modified_date 2012-01-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 394.490
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 32U
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2ZDA
_chem_comp.pdbx_subcomponent_list "DPN PRO 00S"
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
32U N13 N13 N 0 1 N N N N N N 16.407 -15.969 23.217 -4.153 -1.912 0.748 N DPN 1
32U C5 C5 C 0 1 N N R N N N 17.707 -15.263 23.293 -3.803 -0.580 0.238 CA DPN 2
32U C14 C14 C 0 1 N N N N N N 17.642 -13.900 22.652 -2.353 -0.564 -0.172 C DPN 3
32U O32 O32 O 0 1 N N N N N N 16.747 -13.138 23.007 -1.776 -1.606 -0.400 O DPN 4
32U C33 C33 C 0 1 N N N N N N 18.200 -15.178 24.766 -4.679 -0.251 -0.973 CB DPN 5
32U C6 C6 C 0 1 Y N N N N N 19.633 -14.678 24.832 -6.118 -0.146 -0.538 CG DPN 6
32U C8 C8 C 0 1 Y N N N N N 20.702 -15.489 24.440 -6.925 -1.268 -0.544 CD1 DPN 7
32U C12 C12 C 0 1 Y N N N N N 19.899 -13.391 25.291 -6.629 1.071 -0.129 CD2 DPN 8
32U C9 C9 C 0 1 Y N N N N N 22.008 -15.006 24.509 -8.245 -1.172 -0.145 CE1 DPN 9
32U C11 C11 C 0 1 Y N N N N N 21.197 -12.907 25.362 -7.950 1.169 0.266 CE2 DPN 10
32U C10 C10 C 0 1 Y N N N N N 22.270 -13.718 24.967 -8.758 0.047 0.260 CZ DPN 11
32U N1 N1 N 0 1 N N N N N N 18.534 -13.495 21.702 -1.697 0.608 -0.286 N PRO 12
32U C1 C1 C 0 1 N N S N N N 18.402 -12.188 21.106 -0.289 0.768 -0.675 CA PRO 13
32U C7 C7 C 0 1 N N N N N N 17.055 -12.099 20.411 0.598 0.036 0.299 C PRO 14
32U O22 O22 O 0 1 N N N N N N 16.607 -13.059 19.798 0.109 -0.565 1.232 O PRO 15
32U C2 C2 C 0 1 N N N N N N 19.493 -12.258 19.996 0.027 2.278 -0.644 CB PRO 16
32U C3 C3 C 0 1 N N N N N N 20.554 -13.151 20.684 -1.062 2.841 0.308 CG PRO 17
32U C4 C4 C 0 1 N N N N N N 19.715 -14.279 21.340 -2.276 1.943 -0.046 CD PRO 18
32U N23 N23 N 0 1 N N N N N N 16.440 -10.894 20.488 1.936 0.048 0.133 N23 00S 19
32U C24 C24 C 0 1 N N N N N N 15.161 -10.826 19.749 2.798 -0.664 1.079 C16 00S 20
32U C25 C25 C 0 1 Y N N N N N 14.056 -10.814 20.821 4.239 -0.494 0.672 C17 00S 21
32U C26 C26 C 0 1 Y N N N N N 13.633 -12.011 21.385 4.821 -1.402 -0.195 C22 00S 22
32U C27 C27 C 0 1 Y N N N N N 12.636 -12.028 22.357 6.140 -1.252 -0.572 C21 00S 23
32U C28 C28 C 0 1 Y N N N N N 12.038 -10.838 22.783 6.886 -0.182 -0.077 C24 00S 24
32U C21 C21 C 0 1 N N N N N N 10.885 -10.829 23.903 8.301 -0.015 -0.478 C27 00S 25
32U N46 N46 N 1 1 N N N N N N 10.595 -9.697 24.528 9.039 -1.082 -0.776 N35 00S 26
32U N47 N47 N 0 1 N N N N N N 10.235 -11.934 24.195 8.836 1.203 -0.540 N34 00S 27
32U C29 C29 C 0 1 Y N N N N N 12.472 -9.648 22.210 6.293 0.730 0.796 C19 00S 28
32U C30 C30 C 0 1 Y N N N N N 13.472 -9.623 21.235 4.972 0.572 1.161 C18 00S 29
32U H113 H113 H 0 0 N N N N N N 16.489 -16.866 23.651 -4.009 -2.619 0.042 H DPN 30
32U H213 H213 H 0 0 N N N N N N 15.708 -15.432 23.690 -3.634 -2.126 1.586 H2 DPN 31
32U H5 H5 H 0 1 N N N N N N 18.441 -15.849 22.721 -3.968 0.163 1.018 HA DPN 32
32U H133 H133 H 0 0 N N N N N N 17.553 -14.482 25.320 -4.360 0.697 -1.405 HB2 DPN 33
32U H233 H233 H 0 0 N N N N N N 18.149 -16.179 25.218 -4.581 -1.041 -1.718 HB3 DPN 34
32U H8 H8 H 0 1 N N N N N N 20.516 -16.491 24.083 -6.525 -2.220 -0.859 HD1 DPN 35
32U H12A H12A H 0 0 N N N N N N 19.080 -12.758 25.597 -5.997 1.947 -0.120 HD2 DPN 36
32U H9 H9 H 0 1 N N N N N N 22.827 -15.640 24.203 -8.876 -2.048 -0.149 HE1 DPN 37
32U H11 H11 H 0 1 N N N N N N 21.381 -11.905 25.722 -8.351 2.121 0.582 HE2 DPN 38
32U H10 H10 H 0 1 N N N N N N 23.284 -13.349 25.017 -9.789 0.122 0.571 HZ DPN 39
32U H1 H1 H 0 1 N N N N N N 18.491 -11.352 21.815 -0.136 0.378 -1.681 HA PRO 40
32U H12 H12 H 0 1 N N N N N N 19.887 -11.266 19.732 1.023 2.453 -0.237 HB2 PRO 41
32U H22 H22 H 0 1 N N N N N N 19.114 -12.700 19.062 -0.067 2.715 -1.638 HB3 PRO 42
32U H13 H13 H 0 1 N N N N N N 21.272 -13.556 19.956 -0.771 2.717 1.351 HG2 PRO 43
32U H23 H23 H 0 1 N N N N N N 21.128 -12.588 21.435 -1.273 3.887 0.085 HG3 PRO 44
32U H14 H14 H 0 1 N N N N N N 19.491 -15.109 20.653 -2.773 2.313 -0.942 HD2 PRO 45
32U H24 H24 H 0 1 N N N N N N 20.211 -14.741 22.206 -2.976 1.905 0.789 HD3 PRO 46
32U HN23 HN23 H 0 0 N N N N N N 16.817 -10.121 20.998 2.327 0.529 -0.613 HN23 00S 47
32U H124 H124 H 0 0 N N N N N N 15.116 -9.915 19.134 2.653 -0.257 2.080 H16 00S 48
32U H224 H224 H 0 0 N N N N N N 15.049 -11.696 19.085 2.543 -1.723 1.077 H16A 00S 49
32U H26 H26 H 0 1 N N N N N N 14.083 -12.940 21.066 4.243 -2.230 -0.577 H22 00S 50
32U H27 H27 H 0 1 N N N N N N 12.322 -12.968 22.785 6.594 -1.961 -1.248 H21 00S 51
32U H146 H146 H 0 0 N N N N N N 9.879 -9.680 25.226 9.967 -0.972 -1.038 HN35 00S 52
32U H147 H147 H 0 0 N N N N N N 9.518 -11.923 24.892 8.298 1.981 -0.323 HN34 00S 53
32U H247 H247 H 0 0 N N N N N N 10.458 -12.785 23.720 9.763 1.313 -0.803 HN3A 00S 54
32U H29 H29 H 0 1 N N N N N N 12.024 -8.718 22.527 6.866 1.561 1.183 H19 00S 55
32U H30 H30 H 0 1 N N N N N N 13.789 -8.684 20.806 4.510 1.280 1.834 H18 00S 56
32U H246 H246 H 0 0 N N N N N N 11.092 -8.859 24.302 8.650 -1.969 -0.730 H246 00S 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
32U C24 N23 SING N N 1
32U C24 C25 SING N N 2
32U O22 C7 DOUB N N 3
32U C2 C3 SING N N 4
32U C2 C1 SING N N 5
32U C7 N23 SING N N 6
32U C7 C1 SING N N 7
32U C3 C4 SING N N 8
32U C25 C30 DOUB Y N 9
32U C25 C26 SING Y N 10
32U C1 N1 SING N N 11
32U C30 C29 SING Y N 12
32U C4 N1 SING N N 13
32U C26 C27 DOUB Y N 14
32U N1 C14 SING N N 15
32U C29 C28 DOUB Y N 16
32U C27 C28 SING Y N 17
32U C14 O32 DOUB N N 18
32U C14 C5 SING N N 19
32U C28 C21 SING N N 20
32U N13 C5 SING N N 21
32U C5 C33 SING N N 22
32U C21 N47 SING N N 23
32U C21 N46 DOUB N N 24
32U C8 C9 DOUB Y N 25
32U C8 C6 SING Y N 26
32U C9 C10 SING Y N 27
32U C33 C6 SING N N 28
32U C6 C12 DOUB Y N 29
32U C10 C11 DOUB Y N 30
32U C12 C11 SING Y N 31
32U C1 H1 SING N N 32
32U N23 HN23 SING N N 33
32U C24 H124 SING N N 34
32U C24 H224 SING N N 35
32U C26 H26 SING N N 36
32U C27 H27 SING N N 37
32U N46 H146 SING N N 38
32U N46 H246 SING N N 39
32U N47 H147 SING N N 40
32U N47 H247 SING N N 41
32U C29 H29 SING N N 42
32U C30 H30 SING N N 43
32U C2 H12 SING N N 44
32U C2 H22 SING N N 45
32U C3 H13 SING N N 46
32U C3 H23 SING N N 47
32U C4 H14 SING N N 48
32U C4 H24 SING N N 49
32U C5 H5 SING N N 50
32U N13 H113 SING N N 51
32U N13 H213 SING N N 52
32U C33 H133 SING N N 53
32U C33 H233 SING N N 54
32U C8 H8 SING N N 55
32U C9 H9 SING N N 56
32U C10 H10 SING N N 57
32U C11 H11 SING N N 58
32U C12 H12A SING N N 59
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
32U SMILES ACDLabs 12.01 O=C(NCc1ccc(C(=[NH2+])\\N)cc1)C3N(C(=O)C(N)Cc2ccccc2)CCC3
32U InChI InChI 1.03 InChI=1S/C22H27N5O2/c23-18(13-15-5-2-1-3-6-15)22(29)27-12-4-7-19(27)21(28)26-14-16-8-10-17(11-9-16)20(24)25/h1-3,5-6,8-11,18-19H,4,7,12-14,23H2,(H3,24,25)(H,26,28)/p+1/t18-,19+/m1/s1
32U InChIKey InChI 1.03 VZFTWWJAUZOJDH-MOPGFXCFSA-O
32U SMILES_CANONICAL CACTVS 3.385 N[C@H](Cc1ccccc1)C(=O)N2CCC[C@H]2C(=O)NCc3ccc(cc3)C(N)=[NH2+]
32U SMILES CACTVS 3.385 N[CH](Cc1ccccc1)C(=O)N2CCC[CH]2C(=O)NCc3ccc(cc3)C(N)=[NH2+]
32U SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 c1ccc(cc1)C[C@H](C(=O)N2CCC[C@H]2C(=O)NCc3ccc(cc3)C(=[NH2+])N)N
32U SMILES "OpenEye OEToolkits" 1.7.5 c1ccc(cc1)CC(C(=O)N2CCCC2C(=O)NCc3ccc(cc3)C(=[NH2+])N)N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
32U "SYSTEMATIC NAME" ACDLabs 12.01 D-phenylalanyl-N-{4-[amino(iminio)methyl]benzyl}-L-prolinamide
32U "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[azanyl-[4-[[[(2S)-1-[(2R)-2-azanyl-3-phenyl-propanoyl]pyrrolidin-2-yl]carbonylamino]methyl]phenyl]methylidene]azanium"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
32U 'Create component' 2007-11-22 PDBJ
32U 'Modify subcomponent list' 2010-11-15 RCSB
32U 'Modify aromatic_flag' 2011-06-04 RCSB
32U 'Modify descriptor' 2011-06-04 RCSB
32U 'Modify descriptor' 2012-01-05 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id 32U
_pdbe_chem_comp_drugbank_details.drugbank_id DB07005
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'D-phenylalanyl-N-{4-[amino(iminio)methyl]benzyl}-L-prolinamide'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id 32U
_pdbe_chem_comp_drugbank_classification.drugbank_id DB07005
_pdbe_chem_comp_drugbank_classification.parent Dipeptides
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Carboxylic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as dipeptides. These are organic compounds containing a sequence of exactly two alpha-amino acids joined by a peptide bond.'
#
_pdbe_chem_comp_drugbank_targets.comp_id 32U
_pdbe_chem_comp_drugbank_targets.drugbank_id DB07005
_pdbe_chem_comp_drugbank_targets.name Prothrombin
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P00734
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.09.6 'Core functionality.'
pdbeccdutils 0.8.6 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
32U N13 N 4.593 -5.082 1
32U C5 C 6.020 -4.619 2
32U C14 C 6.332 -3.151 3
32U O32 O 7.759 -2.688 4
32U C33 C 7.135 -5.622 5
32U C6 C 6.823 -7.090 6
32U C8 C 5.396 -7.553 7
32U C12 C 7.938 -8.093 8
32U C9 C 5.084 -9.020 9
32U C11 C 7.626 -9.561 10
32U C10 C 6.199 -10.024 11
32U N1 N 5.217 -2.148 12
32U C1 C 5.374 -0.656 13
32U C7 C 6.673 0.094 14
32U O22 O 7.972 -0.656 15
32U C2 C 4.004 -0.046 16
32U C3 C 3.000 -1.161 17
32U C4 C 3.750 -2.460 18
32U N23 N 6.673 1.594 19
32U C24 C 7.972 2.344 20
32U C25 C 7.972 3.844 21
32U C26 C 6.673 4.594 22
32U C27 C 6.673 6.094 23
32U C28 C 7.972 6.844 24
32U C21 C 7.972 8.344 25
32U N46 N 9.271 9.094 26
32U N47 N 6.673 9.094 27
32U C29 C 9.271 6.094 28
32U C30 C 9.271 4.594 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
32U C24 N23 SINGLE NONE 1
32U C24 C25 SINGLE NONE 2
32U O22 C7 DOUBLE NONE 3
32U C2 C3 SINGLE NONE 4
32U C2 C1 SINGLE NONE 5
32U C7 N23 SINGLE NONE 6
32U C1 C7 SINGLE BEGINWEDGE 7
32U C3 C4 SINGLE NONE 8
32U C25 C30 SINGLE NONE 9
32U C25 C26 DOUBLE NONE 10
32U C1 N1 SINGLE NONE 11
32U C30 C29 DOUBLE NONE 12
32U C4 N1 SINGLE NONE 13
32U C26 C27 SINGLE NONE 14
32U N1 C14 SINGLE NONE 15
32U C29 C28 SINGLE NONE 16
32U C27 C28 DOUBLE NONE 17
32U C14 O32 DOUBLE NONE 18
32U C14 C5 SINGLE NONE 19
32U C28 C21 SINGLE NONE 20
32U C5 N13 SINGLE BEGINWEDGE 21
32U C5 C33 SINGLE NONE 22
32U C21 N47 SINGLE NONE 23
32U C21 N46 DOUBLE NONE 24
32U C8 C9 DOUBLE NONE 25
32U C8 C6 SINGLE NONE 26
32U C9 C10 SINGLE NONE 27
32U C33 C6 SINGLE NONE 28
32U C6 C12 DOUBLE NONE 29
32U C10 C11 DOUBLE NONE 30
32U C12 C11 SINGLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
32U MurckoScaffold S1 scaffold 'O=C(NCc1ccccc1)[C@@H]1CCCN1C(=O)CCc1ccccc1' InChI=1S/C21H24N2O2/c24-20(14-13-17-8-3-1-4-9-17)23-15-7-12-19(23)21(25)22-16-18-10-5-2-6-11-18/h1-6,8-11,19H,7,12-16H2,(H,22,25)/t19-/m0/s1 KPZGDKRFIFFBFJ-IBGZPJMESA-N
32U amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
32U peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
32U phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
32U C5 S1 1
32U C14 S1 1
32U O32 S1 1
32U C33 S1 1
32U C6 S1 1
32U C8 S1 1
32U C12 S1 1
32U C9 S1 1
32U C11 S1 1
32U C10 S1 1
32U N1 S1 1
32U C1 S1 1
32U C7 S1 1
32U O22 S1 1
32U C2 S1 1
32U C3 S1 1
32U C4 S1 1
32U N23 S1 1
32U C24 S1 1
32U C25 S1 1
32U C26 S1 1
32U C27 S1 1
32U C28 S1 1
32U C29 S1 1
32U C30 S1 1
32U N1 F1 1
32U C14 F1 1
32U O32 F1 1
32U C5 F1 1
32U N23 F1 2
32U C7 F1 2
32U O22 F1 2
32U C1 F1 2
32U O32 F2 1
32U C14 F2 1
32U C5 F2 1
32U N13 F2 1
32U O22 F2 2
32U C7 F2 2
32U C1 F2 2
32U N1 F2 2
32U C6 F3 1
32U C8 F3 1
32U C9 F3 1
32U C10 F3 1
32U C11 F3 1
32U C12 F3 1
32U C25 F3 2
32U C30 F3 2
32U C29 F3 2
32U C28 F3 2
32U C27 F3 2
32U C26 F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id 32U
_pdbe_chem_comp_rdkit_properties.exactmw 394.224
_pdbe_chem_comp_rdkit_properties.amw 394.499
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 57
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.318
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 209.876
_pdbe_chem_comp_rdkit_properties.tpsa 127.040
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.836
_pdbe_chem_comp_rdkit_properties.CrippenMR 110.569
_pdbe_chem_comp_rdkit_properties.chi0v 14.053
_pdbe_chem_comp_rdkit_properties.chi1v 7.447
_pdbe_chem_comp_rdkit_properties.chi2v 3.042
_pdbe_chem_comp_rdkit_properties.chi3v 3.042
_pdbe_chem_comp_rdkit_properties.chi4v 1.786
_pdbe_chem_comp_rdkit_properties.chi0n 42.053
_pdbe_chem_comp_rdkit_properties.chi1n 21.078
_pdbe_chem_comp_rdkit_properties.chi2n 3.042
_pdbe_chem_comp_rdkit_properties.chi3n 3.042
_pdbe_chem_comp_rdkit_properties.chi4n 1.786
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.190
_pdbe_chem_comp_rdkit_properties.kappa1 5.101
_pdbe_chem_comp_rdkit_properties.kappa2 9.338
_pdbe_chem_comp_rdkit_properties.kappa3 5.203
_pdbe_chem_comp_rdkit_properties.Phi 1.642
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
32U UniChem DrugBank DB07005
32U UniChem PubChem 46937043
32U UniChem 'Probes And Drugs' PD005699
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
32U N13 0.017 1.097 -1.737 ETKDGv3 1
32U C5 1.190 1.101 -0.857 ETKDGv3 2
32U C14 0.951 0.224 0.354 ETKDGv3 3
32U O32 0.273 -0.832 0.220 ETKDGv3 4
32U C33 2.480 0.700 -1.610 ETKDGv3 5
32U C6 2.461 -0.715 -2.137 ETKDGv3 6
32U C8 1.961 -0.990 -3.509 ETKDGv3 7
32U C12 2.878 -1.741 -1.372 ETKDGv3 8
32U C9 1.920 -2.244 -3.973 ETKDGv3 9
32U C11 2.832 -3.124 -1.889 ETKDGv3 10
32U C10 2.376 -3.364 -3.125 ETKDGv3 11
32U N1 1.528 0.532 1.640 ETKDGv3 12
32U C1 1.420 -0.361 2.786 ETKDGv3 13
32U C7 -0.010 -0.449 3.250 ETKDGv3 14
32U O22 -0.498 -1.577 3.534 ETKDGv3 15
32U C2 2.332 0.233 3.861 ETKDGv3 16
32U C3 2.640 1.660 3.416 ETKDGv3 17
32U C4 2.305 1.727 1.930 ETKDGv3 18
32U N23 -0.816 0.732 3.364 ETKDGv3 19
32U C24 -2.271 0.682 3.269 ETKDGv3 20
32U C25 -2.679 0.533 1.829 ETKDGv3 21
32U C26 -2.727 1.603 1.018 ETKDGv3 22
32U C27 -3.073 1.444 -0.409 ETKDGv3 23
32U C28 -3.312 0.222 -0.924 ETKDGv3 24
32U C21 -3.677 0.043 -2.354 ETKDGv3 25
32U N46 -3.154 0.793 -3.278 ETKDGv3 26
32U N47 -4.610 -0.979 -2.723 ETKDGv3 27
32U C29 -3.228 -0.961 -0.030 ETKDGv3 28
32U C30 -2.933 -0.814 1.267 ETKDGv3 29
32U H113 -0.146 0.140 -2.123 ETKDGv3 30
32U H213 0.197 1.736 -2.546 ETKDGv3 31
32U H5 1.325 2.147 -0.513 ETKDGv3 32
32U H133 2.639 1.403 -2.456 ETKDGv3 33
32U H233 3.355 0.832 -0.937 ETKDGv3 34
32U H8 1.623 -0.175 -4.136 ETKDGv3 35
32U H12A 3.243 -1.568 -0.367 ETKDGv3 36
32U H9 1.552 -2.442 -4.972 ETKDGv3 37
32U H11 3.167 -3.943 -1.266 ETKDGv3 38
32U H10 2.341 -4.377 -3.504 ETKDGv3 39
32U H1 1.789 -1.373 2.503 ETKDGv3 40
32U H12 3.280 -0.348 3.900 ETKDGv3 41
32U H22 1.873 0.219 4.874 ETKDGv3 42
32U H13 1.997 2.372 3.978 ETKDGv3 43
32U H23 3.706 1.917 3.600 ETKDGv3 44
32U H14 3.236 1.728 1.325 ETKDGv3 45
32U H24 1.708 2.640 1.718 ETKDGv3 46
32U HN23 -0.357 1.669 3.309 ETKDGv3 47
32U H124 -2.700 1.619 3.689 ETKDGv3 48
32U H224 -2.669 -0.157 3.880 ETKDGv3 49
32U H26 -2.512 2.594 1.400 ETKDGv3 50
32U H27 -3.149 2.334 -1.021 ETKDGv3 51
32U H146 -3.414 0.662 -4.281 ETKDGv3 52
32U H147 -5.120 -1.532 -2.000 ETKDGv3 53
32U H247 -4.840 -1.155 -3.727 ETKDGv3 54
32U H29 -3.387 -1.956 -0.424 ETKDGv3 55
32U H30 -2.867 -1.688 1.903 ETKDGv3 56
32U H246 -2.445 1.527 -3.060 ETKDGv3 57
#