data_37A
#
_chem_comp.id 37A
_chem_comp.name (1S,5S,7R)-N~7~-(BIPHENYL-4-YLMETHYL)-N~3~-HYDROXY-6,8-DIOXA-3-AZABICYCLO[3.2.1]OCTANE-3,7-DICARBOXAMIDE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H21 N3 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
"(1S,5S,7R)-3-AZA-6,8-DIOXA-BICYCLO[3.2.1]OCTANE-3,7-DICARBOXYLIC ACID 7-[(BIPHENYL-4-YLMETHYL)-AMIDE]-3-HYDROXYAMIDE"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-08-04
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 383.398
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 37A
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2HU6
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
37A O6 O6 O 0 1 N N N N N N 0.533 -5.841 5.595 0.267 -1.240 0.116 O6 37A 1
37A C9 C9 C 0 1 N N N N N N 1.511 -6.310 5.020 1.000 -0.348 -0.295 C9 37A 2
37A C6 C6 C 0 1 N N R N N N 1.327 -7.157 3.787 1.397 -0.325 -1.737 C6 37A 3
37A O2 O2 O 0 1 N N N N N N 2.577 -7.564 3.218 0.742 -1.443 -2.341 O2 37A 4
37A C5 C5 C 0 1 N N S N N N 0.686 -6.402 2.637 2.883 -0.581 -1.930 C5 37A 5
37A C7 C7 C 0 1 N N N N N N 0.011 -7.411 1.712 3.388 -0.157 -3.312 C7 37A 6
37A N1 N1 N 0 1 N N N N N N 1.030 -8.393 1.281 2.665 -0.816 -4.410 N1 37A 7
37A C21 C21 C 0 1 N N N N N N 0.853 -9.720 1.287 2.675 -0.213 -5.681 C21 37A 8
37A O1 O1 O 0 1 N N N N N N 1.359 -10.416 0.414 3.265 0.846 -5.915 O1 37A 9
37A N2 N2 N 0 1 N N N N N N 0.118 -10.295 2.236 1.969 -0.893 -6.652 N2 37A 10
37A O4 O4 O 0 1 N N N N N N -0.144 -11.666 2.179 1.970 -0.296 -7.923 O4 37A 11
37A C3 C3 C 0 1 N N N N N N 2.317 -7.859 0.833 2.157 -2.178 -4.143 C3 37A 12
37A O3 O3 O 0 1 N N N N N N 1.796 -5.864 1.935 2.947 -2.013 -1.885 O3 37A 13
37A C1 C1 C 0 1 N N S N N N 2.742 -6.918 1.947 1.799 -2.357 -2.667 C1 37A 14
37A N3 N3 N 0 1 N N N N N N 2.770 -6.133 5.425 1.526 0.690 0.450 N3 37A 15
37A C12 C12 C 0 1 N N N N N N 3.151 -5.363 6.600 1.268 0.860 1.862 C12 37A 16
37A C13 C13 C 0 1 Y N N N N N 4.356 -6.003 7.271 2.283 0.147 2.708 C13 37A 17
37A C15 C15 C 0 1 Y N N N N N 4.301 -6.444 8.597 3.438 0.812 3.103 C15 37A 18
37A C19 C19 C 0 1 Y N N N N N 5.425 -7.021 9.191 4.380 0.150 3.890 C19 37A 19
37A C17 C17 C 0 1 Y N N N N N 6.619 -7.167 8.475 4.161 -1.172 4.276 C17 37A 20
37A C16 C16 C 0 1 Y N N N N N 6.668 -6.729 7.151 2.999 -1.833 3.876 C16 37A 21
37A C14 C14 C 0 1 Y N N N N N 5.548 -6.144 6.562 2.057 -1.170 3.089 C14 37A 22
37A C18 C18 C 0 1 Y N N N N N 7.819 -7.803 9.107 5.139 -1.859 5.092 C18 37A 23
37A C11 C11 C 0 1 Y N N N N N 9.119 -7.448 8.732 6.172 -2.575 4.487 C11 37A 24
37A C2 C2 C 0 1 Y N N N N N 10.220 -8.062 9.332 7.115 -3.238 5.274 C2 37A 25
37A C20 C20 C 0 1 Y N N N N N 7.638 -8.788 10.081 5.048 -1.806 6.483 C20 37A 26
37A C10 C10 C 0 1 Y N N N N N 8.738 -9.399 10.687 5.991 -2.468 7.269 C10 37A 27
37A C4 C4 C 0 1 Y N N N N N 10.031 -9.037 10.312 7.024 -3.184 6.665 C4 37A 28
37A H6 H6 H 0 1 N N N N N N 0.710 -7.992 4.150 1.047 0.614 -2.175 H6 37A 29
37A H5 H5 H 0 1 N N N N N N -0.048 -5.652 2.967 3.507 -0.153 -1.139 H5 37A 30
37A H71 1H7 H 0 1 N N N N N N -0.407 -6.895 0.835 3.332 0.931 -3.429 H71 37A 31
37A H72 2H7 H 0 1 N N N N N N -0.809 -7.920 2.239 4.438 -0.453 -3.427 H72 37A 32
37A HN2 HN2 H 0 1 N N N N N N -0.246 -9.746 2.989 1.723 -1.875 -6.628 HN2 37A 33
37A HO4 HO4 H 0 1 N N N N N N -0.203 -11.940 1.271 1.121 0.176 -7.890 HO4 37A 34
37A H31 1H3 H 0 1 N N N N N N 3.053 -8.663 0.689 2.956 -2.869 -4.433 H31 37A 35
37A H32 2H3 H 0 1 N N N N N N 2.242 -7.349 -0.139 1.275 -2.364 -4.761 H32 37A 36
37A H1 H1 H 0 1 N N N N N N 3.785 -6.599 1.806 1.486 -3.383 -2.451 H1 37A 37
37A HN3 HN3 H 0 1 N N N N N N 3.499 -6.557 4.887 2.123 1.367 -0.017 HN3 37A 38
37A H121 1H12 H 0 0 N N N N N N 3.406 -4.337 6.296 0.260 0.483 2.068 H121 37A 39
37A H122 2H12 H 0 0 N N N N N N 2.310 -5.344 7.309 1.263 1.934 2.075 H122 37A 40
37A H15 H15 H 0 1 N N N N N N 3.387 -6.338 9.163 3.617 1.842 2.806 H15 37A 41
37A H19 H19 H 0 1 N N N N N N 5.373 -7.359 10.215 5.280 0.678 4.195 H19 37A 42
37A H16 H16 H 0 1 N N N N N N 7.578 -6.844 6.580 2.814 -2.864 4.168 H16 37A 43
37A H14 H14 H 0 1 N N N N N N 5.605 -5.795 5.542 1.153 -1.692 2.783 H14 37A 44
37A H11 H11 H 0 1 N N N N N N 9.272 -6.694 7.974 6.256 -2.626 3.404 H11 37A 45
37A H2 H2 H 0 1 N N N N N N 11.220 -7.782 9.037 7.920 -3.795 4.803 H2 37A 46
37A H20 H20 H 0 1 N N N N N N 6.638 -9.080 10.368 4.248 -1.251 6.968 H20 37A 47
37A H10 H10 H 0 1 N N N N N N 8.587 -10.152 11.446 5.920 -2.426 8.352 H10 37A 48
37A H4 H4 H 0 1 N N N N N N 10.883 -9.509 10.778 7.758 -3.700 7.277 H4 37A 49
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
37A O6 C9 DOUB N N 1
37A C9 C6 SING N N 2
37A C9 N3 SING N N 3
37A C6 C5 SING N N 4
37A C6 O2 SING N N 5
37A C6 H6 SING N N 6
37A O2 C1 SING N N 7
37A C5 C7 SING N N 8
37A C5 O3 SING N N 9
37A C5 H5 SING N N 10
37A C7 N1 SING N N 11
37A C7 H71 SING N N 12
37A C7 H72 SING N N 13
37A N1 C3 SING N N 14
37A N1 C21 SING N N 15
37A C21 O1 DOUB N N 16
37A C21 N2 SING N N 17
37A N2 O4 SING N N 18
37A N2 HN2 SING N N 19
37A O4 HO4 SING N N 20
37A C3 C1 SING N N 21
37A C3 H31 SING N N 22
37A C3 H32 SING N N 23
37A O3 C1 SING N N 24
37A C1 H1 SING N N 25
37A N3 C12 SING N N 26
37A N3 HN3 SING N N 27
37A C12 C13 SING N N 28
37A C12 H121 SING N N 29
37A C12 H122 SING N N 30
37A C13 C14 SING Y N 31
37A C13 C15 DOUB Y N 32
37A C15 C19 SING Y N 33
37A C15 H15 SING N N 34
37A C19 C17 DOUB Y N 35
37A C19 H19 SING N N 36
37A C17 C16 SING Y N 37
37A C17 C18 SING Y N 38
37A C16 C14 DOUB Y N 39
37A C16 H16 SING N N 40
37A C14 H14 SING N N 41
37A C18 C11 DOUB Y N 42
37A C18 C20 SING Y N 43
37A C11 C2 SING Y N 44
37A C11 H11 SING N N 45
37A C2 C4 DOUB Y N 46
37A C2 H2 SING N N 47
37A C20 C10 DOUB Y N 48
37A C20 H20 SING N N 49
37A C10 C4 SING Y N 50
37A C10 H10 SING N N 51
37A C4 H4 SING N N 52
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
37A SMILES ACDLabs 10.04 O=C(N4CC3OC(C(=O)NCc2ccc(c1ccccc1)cc2)C(O3)C4)NO
37A SMILES_CANONICAL CACTVS 3.341 ONC(=O)N1C[C@H]2O[C@@H](C1)[C@@H](O2)C(=O)NCc3ccc(cc3)c4ccccc4
37A SMILES CACTVS 3.341 ONC(=O)N1C[CH]2O[CH](C1)[CH](O2)C(=O)NCc3ccc(cc3)c4ccccc4
37A SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)c2ccc(cc2)CNC(=O)[C@H]3[C@@H]4CN(C[C@@H](O4)O3)C(=O)NO
37A SMILES "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)c2ccc(cc2)CNC(=O)C3C4CN(CC(O4)O3)C(=O)NO
37A InChI InChI 1.03 InChI=1S/C20H21N3O5/c24-19(18-16-11-23(20(25)22-26)12-17(27-16)28-18)21-10-13-6-8-15(9-7-13)14-4-2-1-3-5-14/h1-9,16-18,26H,10-12H2,(H,21,24)(H,22,25)/t16-,17-,18+/m0/s1
37A InChIKey InChI 1.03 PPLDARNGJSQINK-OKZBNKHCSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
37A "SYSTEMATIC NAME" ACDLabs 10.04 (1S,5S,7R)-N~7~-(biphenyl-4-ylmethyl)-N~3~-hydroxy-6,8-dioxa-3-azabicyclo[3.2.1]octane-3,7-dicarboxamide
37A "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(1S,5S,7R)-N-hydroxy-N'-[(4-phenylphenyl)methyl]-6,8-dioxa-3-azabicyclo[3.2.1]octane-3,7-dicarboxamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
37A 'Create component' 2006-08-04 PDBJ
37A 'Modify aromatic_flag' 2011-06-04 RCSB
37A 'Modify descriptor' 2011-06-04 RCSB
37A 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 37A
_pdbx_chem_comp_synonyms.name
"(1S,5S,7R)-3-AZA-6,8-DIOXA-BICYCLO[3.2.1]OCTANE-3,7-DICARBOXYLIC ACID 7-[(BIPHENYL-4-YLMETHYL)-AMIDE]-3-HYDROXYAMIDE"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id 37A
_pdbe_chem_comp_drugbank_details.drugbank_id DB07026
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name
'(1S,5S,7R)-N~7~-(BIPHENYL-4-YLMETHYL)-N~3~-HYDROXY-6,8-DIOXA-3-AZABICYCLO[3.2.1]OCTANE-3,7-DICARBOXAMIDE'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id 37A
_pdbe_chem_comp_synonyms.name
'(1S,5S,7R)-3-AZA-6,8-DIOXA-BICYCLO[3.2.1]OCTANE-3,7-DICARBOXYLIC ACID 7-[(BIPHENYL-4-YLMETHYL)-AMIDE]-3-HYDROXYAMIDE'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id 37A
_pdbe_chem_comp_drugbank_classification.drugbank_id DB07026
_pdbe_chem_comp_drugbank_classification.parent 'Biphenyls and derivatives'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Benzene and substituted derivatives'
_pdbe_chem_comp_drugbank_classification.superclass Benzenoids
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as biphenyls and derivatives. These are organic compounds containing to benzene rings linked together by a C-C bond.'
#
_pdbe_chem_comp_drugbank_targets.comp_id 37A
_pdbe_chem_comp_drugbank_targets.drugbank_id DB07026
_pdbe_chem_comp_drugbank_targets.name 'Macrophage metalloelastase'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P39900
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
37A O6 O -1.268 3.204 1
37A C9 C -1.276 1.706 2
37A C6 C -2.612 0.914 3
37A O2 O -2.783 -0.599 4
37A C5 C -4.053 1.348 5
37A C7 C -5.240 1.975 6
37A N1 N -6.449 0.585 7
37A C21 C -7.867 0.735 8
37A O1 O -8.471 2.098 9
37A N2 N -8.715 -0.474 10
37A O4 O -10.187 -0.341 11
37A C3 C -5.580 -1.041 12
37A O3 O -4.547 0.369 13
37A C1 C -4.286 -0.696 14
37A N3 N 0.067 0.921 15
37A C12 C 1.417 1.649 16
37A C13 C 2.749 0.864 17
37A C15 C 4.052 1.603 18
37A C19 C 5.349 0.851 19
37A C17 C 5.341 -0.654 20
37A C16 C 4.037 -1.392 21
37A C14 C 2.741 -0.640 22
37A C18 C 6.635 -1.405 23
37A C11 C 6.627 -2.910 24
37A C2 C 7.923 -3.662 25
37A C20 C 7.939 -0.667 26
37A C10 C 9.235 -1.419 27
37A C4 C 9.227 -2.924 28
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
37A O6 C9 DOUBLE NONE 1
37A C6 C9 SINGLE BEGINDASH 2
37A C9 N3 SINGLE NONE 3
37A C6 C5 SINGLE NONE 4
37A C6 O2 SINGLE NONE 5
37A O2 C1 SINGLE NONE 6
37A C5 C7 SINGLE NONE 7
37A C5 O3 SINGLE NONE 8
37A C7 N1 SINGLE NONE 9
37A N1 C3 SINGLE NONE 10
37A N1 C21 SINGLE NONE 11
37A C21 O1 DOUBLE NONE 12
37A C21 N2 SINGLE NONE 13
37A N2 O4 SINGLE NONE 14
37A C3 C1 SINGLE NONE 15
37A O3 C1 SINGLE NONE 16
37A N3 C12 SINGLE NONE 17
37A C12 C13 SINGLE NONE 18
37A C13 C14 SINGLE NONE 19
37A C13 C15 DOUBLE NONE 20
37A C15 C19 SINGLE NONE 21
37A C19 C17 DOUBLE NONE 22
37A C17 C16 SINGLE NONE 23
37A C17 C18 SINGLE NONE 24
37A C16 C14 DOUBLE NONE 25
37A C18 C11 DOUBLE NONE 26
37A C18 C20 SINGLE NONE 27
37A C11 C2 SINGLE NONE 28
37A C2 C4 DOUBLE NONE 29
37A C20 C10 DOUBLE NONE 30
37A C10 C4 SINGLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
37A MurckoScaffold S1 scaffold 'O=C(NCc1ccc(-c2ccccc2)cc1)[C@@H]1O[C@H]2CNC[C@@H]1O2' InChI=1S/C19H20N2O3/c22-19(18-16-11-20-12-17(23-16)24-18)21-10-13-6-8-15(9-7-13)14-4-2-1-3-5-14/h1-9,16-18,20H,10-12H2,(H,21,22)/t16-,17-,18+/m0/s1 HNDOIYLYASIOSM-OKZBNKHCSA-N
37A amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
37A phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
37A Z33297786 F3 fragment COCC(=O)NCc1ccc(C)cc1 InChI=1S/C11H15NO2/c1-9-3-5-10(6-4-9)7-12-11(13)8-14-2/h3-6H,7-8H2,1-2H3,(H,12,13) LZKKUVDCFSJGNG-UHFFFAOYSA-N
37A Z31478538 F4 fragment COCC(=O)NCc1ccccc1 InChI=1S/C10H13NO2/c1-13-8-10(12)11-7-9-5-3-2-4-6-9/h2-6H,7-8H2,1H3,(H,11,12) VLAPGEODGZEQPC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
37A O6 S1 1
37A C9 S1 1
37A C6 S1 1
37A O2 S1 1
37A C5 S1 1
37A C7 S1 1
37A N1 S1 1
37A C3 S1 1
37A O3 S1 1
37A C1 S1 1
37A N3 S1 1
37A C12 S1 1
37A C13 S1 1
37A C15 S1 1
37A C19 S1 1
37A C17 S1 1
37A C16 S1 1
37A C14 S1 1
37A C18 S1 1
37A C11 S1 1
37A C2 S1 1
37A C20 S1 1
37A C10 S1 1
37A C4 S1 1
37A N3 F1 1
37A C9 F1 1
37A O6 F1 1
37A C6 F1 1
37A C13 F2 1
37A C14 F2 1
37A C16 F2 1
37A C17 F2 1
37A C19 F2 1
37A C15 F2 1
37A C18 F2 2
37A C11 F2 2
37A C2 F2 2
37A C4 F2 2
37A C10 F2 2
37A C20 F2 2
37A C1 F3 1
37A O2 F3 1
37A C6 F3 1
37A C9 F3 1
37A O6 F3 1
37A N3 F3 1
37A C12 F3 1
37A C13 F3 1
37A C14 F3 1
37A C16 F3 1
37A C17 F3 1
37A C18 F3 1
37A C19 F3 1
37A C15 F3 1
37A C1 F4 1
37A O2 F4 1
37A C6 F4 1
37A C9 F4 1
37A O6 F4 1
37A N3 F4 1
37A C12 F4 1
37A C13 F4 1
37A C14 F4 1
37A C16 F4 1
37A C17 F4 1
37A C19 F4 1
37A C15 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 37A
_pdbe_chem_comp_rdkit_properties.exactmw 383.148
_pdbe_chem_comp_rdkit_properties.amw 383.404
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28
_pdbe_chem_comp_rdkit_properties.NumAtoms 49
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.300
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 2
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 191.262
_pdbe_chem_comp_rdkit_properties.tpsa 100.130
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.060
_pdbe_chem_comp_rdkit_properties.CrippenMR 97.562
_pdbe_chem_comp_rdkit_properties.chi0v 13.383
_pdbe_chem_comp_rdkit_properties.chi1v 7.249
_pdbe_chem_comp_rdkit_properties.chi2v 3.120
_pdbe_chem_comp_rdkit_properties.chi3v 3.120
_pdbe_chem_comp_rdkit_properties.chi4v 1.942
_pdbe_chem_comp_rdkit_properties.chi0n 34.383
_pdbe_chem_comp_rdkit_properties.chi1n 17.552
_pdbe_chem_comp_rdkit_properties.chi2n 3.120
_pdbe_chem_comp_rdkit_properties.chi3n 3.120
_pdbe_chem_comp_rdkit_properties.chi4n 1.942
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.940
_pdbe_chem_comp_rdkit_properties.kappa1 6.027
_pdbe_chem_comp_rdkit_properties.kappa2 7.972
_pdbe_chem_comp_rdkit_properties.kappa3 3.840
_pdbe_chem_comp_rdkit_properties.Phi 1.716
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
37A UniChem DrugBank DB07026
37A UniChem PDBe 37A
37A UniChem ZINC ZINC000053683784
37A UniChem PubChem 11987860
37A UniChem BindingDb 29018
37A UniChem BRENDA 67575
37A UniChem 'Probes And Drugs' PD005678
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
37A O6 -0.734 2.976 0.274 ETKDGv3 1
37A C9 -1.222 2.063 0.994 ETKDGv3 2
37A C6 -2.462 1.347 0.531 ETKDGv3 3
37A O2 -3.359 1.204 1.597 ETKDGv3 4
37A C5 -2.146 -0.071 0.079 ETKDGv3 5
37A C7 -3.124 -0.542 -1.017 ETKDGv3 6
37A N1 -4.491 -0.722 -0.479 ETKDGv3 7
37A C21 -5.556 -1.048 -1.399 ETKDGv3 8
37A O1 -5.327 -1.063 -2.639 ETKDGv3 9
37A N2 -6.877 -1.361 -0.935 ETKDGv3 10
37A O4 -7.862 -1.641 -1.823 ETKDGv3 11
37A C3 -4.754 -0.665 0.976 ETKDGv3 12
37A O3 -2.381 -0.835 1.217 ETKDGv3 13
37A C1 -3.510 -0.192 1.749 ETKDGv3 14
37A N3 -0.572 1.684 2.216 ETKDGv3 15
37A C12 0.745 2.193 2.591 ETKDGv3 16
37A C13 1.804 1.589 1.710 ETKDGv3 17
37A C15 2.121 0.288 1.822 ETKDGv3 18
37A C19 3.132 -0.315 0.929 ETKDGv3 19
37A C17 3.741 0.427 -0.015 ETKDGv3 20
37A C16 3.385 1.866 -0.137 ETKDGv3 21
37A C14 2.472 2.412 0.675 ETKDGv3 22
37A C18 4.750 -0.177 -0.921 ETKDGv3 23
37A C11 4.798 0.163 -2.224 ETKDGv3 24
37A C2 5.801 -0.446 -3.122 ETKDGv3 25
37A C20 5.729 -1.171 -0.402 ETKDGv3 26
37A C10 6.636 -1.720 -1.220 ETKDGv3 27
37A C4 6.673 -1.342 -2.646 ETKDGv3 28
37A H6 -2.946 1.941 -0.277 ETKDGv3 29
37A H5 -1.094 -0.189 -0.265 ETKDGv3 30
37A H71 -2.767 -1.512 -1.423 ETKDGv3 31
37A H72 -3.134 0.195 -1.850 ETKDGv3 32
37A HN2 -7.099 -1.414 0.082 ETKDGv3 33
37A HO4 -8.300 -0.770 -1.998 ETKDGv3 34
37A H31 -5.593 0.035 1.183 ETKDGv3 35
37A H32 -5.035 -1.679 1.334 ETKDGv3 36
37A H1 -3.611 -0.437 2.827 ETKDGv3 37
37A HN3 -1.025 0.983 2.844 ETKDGv3 38
37A H121 0.957 1.927 3.649 ETKDGv3 39
37A H122 0.752 3.303 2.525 ETKDGv3 40
37A H15 1.632 -0.336 2.560 ETKDGv3 41
37A H19 3.349 -1.370 1.035 ETKDGv3 42
37A H16 3.875 2.490 -0.875 ETKDGv3 43
37A H14 2.227 3.462 0.574 ETKDGv3 44
37A H11 4.090 0.868 -2.643 ETKDGv3 45
37A H2 5.826 -0.168 -4.168 ETKDGv3 46
37A H20 5.728 -1.446 0.645 ETKDGv3 47
37A H10 7.350 -2.438 -0.836 ETKDGv3 48
37A H4 7.408 -1.789 -3.303 ETKDGv3 49
#