data_3CR
#
_chem_comp.id 3CR
_chem_comp.name "(2E)-2-(hydroxyimino)-3-phenylpropanoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C9 H9 N O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-07-30
_chem_comp.pdbx_modified_date 2015-02-06
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 179.173
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 3CR
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4U6Q
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
3CR O01 O01 O 0 1 N N N N N N 5.057 27.334 -20.991 2.604 1.631 0.971 O01 3CR 1
3CR C02 C02 C 0 1 N N N N N N 4.937 28.588 -20.983 1.630 1.241 0.127 C02 3CR 2
3CR O03 O03 O 0 1 N N N N N N 5.509 29.279 -21.867 0.872 2.064 -0.348 O03 3CR 3
3CR C04 C04 C 0 1 N N N N N N 4.123 29.252 -19.925 1.483 -0.184 -0.222 C04 3CR 4
3CR N05 N05 N 0 1 N N N N N N 3.082 28.634 -19.441 2.289 -1.060 0.283 N05 3CR 5
3CR O06 O06 O 0 1 N N N N N N 2.449 29.076 -18.395 2.148 -2.429 -0.052 O06 3CR 6
3CR C07 C07 C 0 1 N N N N N N 4.492 30.626 -19.473 0.393 -0.620 -1.167 C07 3CR 7
3CR C08 C08 C 0 1 Y N N N N N 5.357 30.737 -18.265 -0.952 -0.357 -0.539 C08 3CR 8
3CR C09 C09 C 0 1 Y N N N N N 6.467 31.566 -18.287 -1.552 -1.327 0.242 C09 3CR 9
3CR C10 C10 C 0 1 Y N N N N N 7.275 31.672 -17.165 -2.785 -1.086 0.818 C10 3CR 10
3CR C11 C11 C 0 1 Y N N N N N 6.972 30.946 -16.023 -3.418 0.126 0.614 C11 3CR 11
3CR C12 C12 C 0 1 Y N N N N N 5.863 30.113 -16.001 -2.818 1.096 -0.166 C12 3CR 12
3CR C13 C13 C 0 1 Y N N N N N 5.055 30.011 -17.123 -1.582 0.857 -0.739 C13 3CR 13
3CR H1 H1 H 0 1 N N N N N N 5.605 27.073 -21.721 2.661 2.576 1.170 H1 3CR 14
3CR H2 H2 H 0 1 N N N N N N 1.724 28.496 -18.195 2.795 -3.007 0.374 H2 3CR 15
3CR H3 H3 H 0 1 N N N N N N 5.020 31.117 -20.304 0.474 -0.061 -2.099 H3 3CR 16
3CR H4 H4 H 0 1 N N N N N N 3.558 31.167 -19.262 0.495 -1.686 -1.373 H4 3CR 17
3CR H5 H5 H 0 1 N N N N N N 6.703 32.129 -19.178 -1.057 -2.274 0.401 H5 3CR 18
3CR H6 H6 H 0 1 N N N N N N 8.139 32.319 -17.181 -3.254 -1.844 1.428 H6 3CR 19
3CR H7 H7 H 0 1 N N N N N N 7.601 31.029 -15.149 -4.382 0.314 1.064 H7 3CR 20
3CR H8 H8 H 0 1 N N N N N N 5.630 29.545 -15.112 -3.312 2.043 -0.326 H8 3CR 21
3CR H9 H9 H 0 1 N N N N N N 4.189 29.365 -17.107 -1.112 1.616 -1.345 H9 3CR 22
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3CR O03 C02 DOUB N N 1
3CR O01 C02 SING N N 2
3CR C02 C04 SING N N 3
3CR C04 C07 SING N N 4
3CR C04 N05 DOUB N E 5
3CR C07 C08 SING N N 6
3CR N05 O06 SING N N 7
3CR C09 C08 DOUB Y N 8
3CR C09 C10 SING Y N 9
3CR C08 C13 SING Y N 10
3CR C10 C11 DOUB Y N 11
3CR C13 C12 DOUB Y N 12
3CR C11 C12 SING Y N 13
3CR O01 H1 SING N N 14
3CR O06 H2 SING N N 15
3CR C07 H3 SING N N 16
3CR C07 H4 SING N N 17
3CR C09 H5 SING N N 18
3CR C10 H6 SING N N 19
3CR C11 H7 SING N N 20
3CR C12 H8 SING N N 21
3CR C13 H9 SING N N 22
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
3CR SMILES ACDLabs 12.01 O=C(O)\C(=N\O)Cc1ccccc1
3CR InChI InChI 1.03 InChI=1S/C9H9NO3/c11-9(12)8(10-13)6-7-4-2-1-3-5-7/h1-5,13H,6H2,(H,11,12)/b10-8+
3CR InChIKey InChI 1.03 PNTMGOUAICFJQK-CSKARUKUSA-N
3CR SMILES_CANONICAL CACTVS 3.385 O/N=C(Cc1ccccc1)/C(O)=O
3CR SMILES CACTVS 3.385 ON=C(Cc1ccccc1)C(O)=O
3CR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 c1ccc(cc1)C/C(=N\O)/C(=O)O
3CR SMILES "OpenEye OEToolkits" 1.7.6 c1ccc(cc1)CC(=NO)C(=O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
3CR "SYSTEMATIC NAME" ACDLabs 12.01 "(2E)-2-(hydroxyimino)-3-phenylpropanoic acid"
3CR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2E)-2-hydroxyimino-3-phenyl-propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
3CR 'Create component' 2014-07-30 RCSB
3CR 'Initial release' 2015-02-11 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
3CR O01 O 6.897 3.285 1
3CR C02 C 5.598 2.535 2
3CR O03 O 4.299 3.285 3
3CR C04 C 5.598 1.035 4
3CR N05 N 6.897 0.285 5
3CR O06 O 6.897 -1.215 6
3CR C07 C 4.299 0.285 7
3CR C08 C 4.299 -1.215 8
3CR C09 C 3.000 -1.965 9
3CR C10 C 3.000 -3.465 10
3CR C11 C 4.299 -4.215 11
3CR C12 C 5.598 -3.465 12
3CR C13 C 5.598 -1.965 13
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
3CR O03 C02 DOUBLE NONE 1
3CR O01 C02 SINGLE NONE 2
3CR C02 C04 SINGLE ENDUPRIGHT 3
3CR C04 C07 SINGLE ENDUPRIGHT 4
3CR C04 N05 DOUBLE NONE 5
3CR C07 C08 SINGLE NONE 6
3CR N05 O06 SINGLE ENDUPRIGHT 7
3CR C09 C08 DOUBLE NONE 8
3CR C09 C10 SINGLE NONE 9
3CR C08 C13 SINGLE NONE 10
3CR C10 C11 DOUBLE NONE 11
3CR C13 C12 DOUBLE NONE 12
3CR C11 C12 SINGLE NONE 13
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
3CR MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
3CR phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
3CR C08 S1 1
3CR C09 S1 1
3CR C10 S1 1
3CR C11 S1 1
3CR C12 S1 1
3CR C13 S1 1
3CR C08 F1 1
3CR C09 F1 1
3CR C10 F1 1
3CR C11 F1 1
3CR C12 F1 1
3CR C13 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 3CR
_pdbe_chem_comp_rdkit_properties.exactmw 179.058
_pdbe_chem_comp_rdkit_properties.amw 179.175
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 13
_pdbe_chem_comp_rdkit_properties.NumAtoms 22
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.111
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 87.944
_pdbe_chem_comp_rdkit_properties.tpsa 69.890
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.089
_pdbe_chem_comp_rdkit_properties.CrippenMR 46.737
_pdbe_chem_comp_rdkit_properties.chi0v 6.172
_pdbe_chem_comp_rdkit_properties.chi1v 3.064
_pdbe_chem_comp_rdkit_properties.chi2v 1.028
_pdbe_chem_comp_rdkit_properties.chi3v 1.028
_pdbe_chem_comp_rdkit_properties.chi4v 0.542
_pdbe_chem_comp_rdkit_properties.chi0n 15.172
_pdbe_chem_comp_rdkit_properties.chi1n 7.381
_pdbe_chem_comp_rdkit_properties.chi2n 1.028
_pdbe_chem_comp_rdkit_properties.chi3n 1.028
_pdbe_chem_comp_rdkit_properties.chi4n 0.542
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.840
_pdbe_chem_comp_rdkit_properties.kappa1 2.834
_pdbe_chem_comp_rdkit_properties.kappa2 4.252
_pdbe_chem_comp_rdkit_properties.kappa3 2.591
_pdbe_chem_comp_rdkit_properties.Phi 0.927
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
3CR UniChem PDBe 3CR
3CR UniChem 'PubChem TPHARMA' 14992691
3CR UniChem NMRShiftDB 20181390
3CR UniChem PubChem 6399465
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
3CR O01 -3.237 -1.191 -2.101 ETKDGv3 1
3CR C02 -2.275 -1.472 -1.135 ETKDGv3 2
3CR O03 -1.739 -2.613 -1.107 ETKDGv3 3
3CR C04 -1.892 -0.434 -0.157 ETKDGv3 4
3CR N05 -2.469 0.731 -0.249 ETKDGv3 5
3CR O06 -2.217 1.812 0.572 ETKDGv3 6
3CR C07 -0.831 -0.726 0.885 ETKDGv3 7
3CR C08 0.496 -0.112 0.514 ETKDGv3 8
3CR C09 1.140 -0.490 -0.607 ETKDGv3 9
3CR C10 2.447 0.106 -0.955 ETKDGv3 10
3CR C11 3.005 1.016 -0.148 ETKDGv3 11
3CR C12 2.318 1.422 1.094 ETKDGv3 12
3CR C13 1.132 0.887 1.411 ETKDGv3 13
3CR H1 -3.512 -1.890 -2.780 ETKDGv3 14
3CR H2 -1.553 1.783 1.333 ETKDGv3 15
3CR H3 -0.690 -1.821 1.006 ETKDGv3 16
3CR H4 -1.173 -0.368 1.879 ETKDGv3 17
3CR H5 0.712 -1.232 -1.269 ETKDGv3 18
3CR H6 2.952 -0.196 -1.864 ETKDGv3 19
3CR H7 3.963 1.453 -0.401 ETKDGv3 20
3CR H8 2.778 2.150 1.749 ETKDGv3 21
3CR H9 0.643 1.185 2.330 ETKDGv3 22
#