data_3DX
#
_chem_comp.id 3DX
_chem_comp.name "3-[4-(4-methylpiperazin-1-yl)phenyl]-9H-pyrrolo[2,3-b:5,4-c']dipyridine-6-carbonitrile"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H20 N6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-07-30
_chem_comp.pdbx_modified_date 2014-12-12
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 368.434
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 3DX
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4QYH
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
3DX N6 N6 N 0 1 N N N N N N 9.001 5.819 14.913 -6.839 -4.051 -0.186 N6 3DX 1
3DX C22 C22 C 0 1 N N N N N N 8.442 6.498 15.668 -6.479 -2.976 -0.113 C22 3DX 2
3DX C9 C9 C 0 1 Y N N N N N 7.852 7.266 16.513 -6.026 -1.621 -0.020 C9 3DX 3
3DX N3 N3 N 0 1 Y N N N N N 8.601 8.259 17.047 -6.914 -0.637 0.108 N3 3DX 4
3DX C10 C10 C 0 1 Y N N N N N 8.103 9.131 17.935 -6.558 0.624 0.198 C10 3DX 5
3DX C7 C7 C 0 1 Y N N N N N 6.778 9.036 18.324 -5.213 0.988 0.162 C7 3DX 6
3DX N2 N2 N 0 1 Y N N N N N 5.999 9.761 19.176 -4.564 2.204 0.234 N2 3DX 7
3DX C2 C2 C 0 1 Y N N N N N 4.755 9.231 19.190 -3.198 2.029 0.152 C2 3DX 8
3DX C8 C8 C 0 1 Y N N N N N 6.499 7.123 16.865 -4.661 -1.347 -0.059 C8 3DX 9
3DX C6 C6 C 0 1 Y N N N N N 5.978 8.035 17.793 -4.244 -0.022 0.027 C6 3DX 10
3DX C1 C1 C 0 1 Y N N N N N 4.713 8.162 18.334 -2.937 0.653 0.021 C1 3DX 11
3DX C5 C5 C 0 1 Y N N N N N 3.519 7.450 18.170 -1.622 0.208 -0.076 C5 3DX 12
3DX C4 C4 C 0 1 Y N N N N N 2.397 7.896 18.903 -0.602 1.160 -0.047 C4 3DX 13
3DX C3 C3 C 0 1 Y N N N N N 2.525 8.998 19.759 -0.938 2.509 0.077 C3 3DX 14
3DX N1 N1 N 0 1 Y N N N N N 3.687 9.654 19.896 -2.191 2.894 0.176 N1 3DX 15
3DX C11 C11 C 0 1 Y N N N N N 1.057 7.226 18.811 0.819 0.744 -0.146 C11 3DX 16
3DX C16 C16 C 0 1 Y N N N N N 0.691 6.522 17.661 1.144 -0.605 -0.274 C16 3DX 17
3DX C15 C15 C 0 1 Y N N N N N -0.554 5.902 17.569 2.465 -0.989 -0.366 C15 3DX 18
3DX C14 C14 C 0 1 Y N N N N N -1.482 5.979 18.619 3.472 -0.032 -0.330 C14 3DX 19
3DX C13 C13 C 0 1 Y N N N N N -1.117 6.687 19.763 3.150 1.314 -0.201 C13 3DX 20
3DX C12 C12 C 0 1 Y N N N N N 0.128 7.307 19.859 1.831 1.703 -0.116 C12 3DX 21
3DX N4 N4 N 0 1 N N N N N N -2.702 5.358 18.566 4.809 -0.424 -0.422 N4 3DX 22
3DX C20 C20 C 0 1 N N N N N N -2.925 4.298 17.581 5.147 -1.397 0.626 C20 3DX 23
3DX C19 C19 C 0 1 N N N N N N -3.811 3.276 18.275 6.594 -1.860 0.441 C19 3DX 24
3DX N5 N5 N 0 1 N N N N N N -5.065 3.902 18.735 7.489 -0.696 0.500 N5 3DX 25
3DX C21 C21 C 0 1 N N N N N N -5.879 2.885 19.436 8.895 -1.108 0.403 C21 3DX 26
3DX C18 C18 C 0 1 N N N N N N -4.784 5.052 19.626 7.151 0.278 -0.548 C18 3DX 27
3DX C17 C17 C 0 1 N N N N N N -3.912 6.090 18.925 5.704 0.740 -0.363 C17 3DX 28
3DX H1 H1 H 0 1 N N N N N N 8.734 9.905 18.346 -7.315 1.387 0.300 H1 3DX 29
3DX H2 H2 H 0 1 N N N N N N 6.299 10.555 19.704 -5.006 3.061 0.329 H2 3DX 30
3DX H3 H3 H 0 1 N N N N N N 5.886 6.343 16.438 -3.941 -2.146 -0.158 H3 3DX 31
3DX H4 H4 H 0 1 N N N N N N 3.458 6.596 17.511 -1.397 -0.844 -0.170 H4 3DX 32
3DX H5 H5 H 0 1 N N N N N N 1.665 9.328 20.323 -0.152 3.250 0.101 H5 3DX 33
3DX H6 H6 H 0 1 N N N N N N 1.381 6.457 16.833 0.361 -1.349 -0.302 H6 3DX 34
3DX H7 H7 H 0 1 N N N N N N -0.809 5.353 16.675 2.717 -2.035 -0.466 H7 3DX 35
3DX H8 H8 H 0 1 N N N N N N -1.810 6.756 20.588 3.935 2.056 -0.172 H8 3DX 36
3DX H9 H9 H 0 1 N N N N N N 0.381 7.858 20.753 1.581 2.749 -0.021 H9 3DX 37
3DX H10 H10 H 0 1 N N N N N N -1.969 3.840 17.286 5.036 -0.931 1.605 H10 3DX 38
3DX H11 H11 H 0 1 N N N N N N -3.429 4.701 16.690 4.478 -2.256 0.553 H11 3DX 39
3DX H12 H12 H 0 1 N N N N N N -4.049 2.466 17.570 6.856 -2.560 1.235 H12 3DX 40
3DX H13 H13 H 0 1 N N N N N N -3.275 2.862 19.142 6.699 -2.351 -0.526 H13 3DX 41
3DX H15 H15 H 0 1 N N N N N N -6.817 3.342 19.784 9.058 -1.626 -0.542 H15 3DX 42
3DX H16 H16 H 0 1 N N N N N N -6.107 2.059 18.746 9.536 -0.227 0.449 H16 3DX 43
3DX H17 H17 H 0 1 N N N N N N -5.318 2.498 20.299 9.137 -1.776 1.230 H17 3DX 44
3DX H18 H18 H 0 1 N N N N N N -5.735 5.521 19.919 7.819 1.136 -0.475 H18 3DX 45
3DX H19 H19 H 0 1 N N N N N N -4.261 4.691 20.524 7.263 -0.188 -1.527 H19 3DX 46
3DX H20 H20 H 0 1 N N N N N N -3.677 6.924 19.603 5.442 1.441 -1.157 H20 3DX 47
3DX H21 H21 H 0 1 N N N N N N -4.414 6.478 18.027 5.599 1.231 0.604 H21 3DX 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3DX N6 C22 TRIP N N 1
3DX C22 C9 SING N N 2
3DX C9 C8 DOUB Y N 3
3DX C9 N3 SING Y N 4
3DX C8 C6 SING Y N 5
3DX N3 C10 DOUB Y N 6
3DX C15 C16 DOUB Y N 7
3DX C15 C14 SING Y N 8
3DX C20 C19 SING N N 9
3DX C20 N4 SING N N 10
3DX C16 C11 SING Y N 11
3DX C6 C7 DOUB Y N 12
3DX C6 C1 SING Y N 13
3DX C10 C7 SING Y N 14
3DX C5 C1 DOUB Y N 15
3DX C5 C4 SING Y N 16
3DX C19 N5 SING N N 17
3DX C7 N2 SING Y N 18
3DX C1 C2 SING Y N 19
3DX N4 C14 SING N N 20
3DX N4 C17 SING N N 21
3DX C14 C13 DOUB Y N 22
3DX N5 C21 SING N N 23
3DX N5 C18 SING N N 24
3DX C11 C4 SING N N 25
3DX C11 C12 DOUB Y N 26
3DX C4 C3 DOUB Y N 27
3DX C17 C18 SING N N 28
3DX N2 C2 SING Y N 29
3DX C2 N1 DOUB Y N 30
3DX C3 N1 SING Y N 31
3DX C13 C12 SING Y N 32
3DX C10 H1 SING N N 33
3DX N2 H2 SING N N 34
3DX C8 H3 SING N N 35
3DX C5 H4 SING N N 36
3DX C3 H5 SING N N 37
3DX C16 H6 SING N N 38
3DX C15 H7 SING N N 39
3DX C13 H8 SING N N 40
3DX C12 H9 SING N N 41
3DX C20 H10 SING N N 42
3DX C20 H11 SING N N 43
3DX C19 H12 SING N N 44
3DX C19 H13 SING N N 45
3DX C21 H15 SING N N 46
3DX C21 H16 SING N N 47
3DX C21 H17 SING N N 48
3DX C18 H18 SING N N 49
3DX C18 H19 SING N N 50
3DX C17 H20 SING N N 51
3DX C17 H21 SING N N 52
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
3DX SMILES ACDLabs 12.01 "N#Cc5ncc2c(c1cc(cnc1n2)c3ccc(cc3)N4CCN(C)CC4)c5"
3DX InChI InChI 1.03 InChI=1S/C22H20N6/c1-27-6-8-28(9-7-27)18-4-2-15(3-5-18)16-10-20-19-11-17(12-23)24-14-21(19)26-22(20)25-13-16/h2-5,10-11,13-14H,6-9H2,1H3,(H,25,26)
3DX InChIKey InChI 1.03 PVRJSOWSQUNARV-UHFFFAOYSA-N
3DX SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)c2ccc(cc2)c3cnc4[nH]c5cnc(cc5c4c3)C#N"
3DX SMILES CACTVS 3.385 "CN1CCN(CC1)c2ccc(cc2)c3cnc4[nH]c5cnc(cc5c4c3)C#N"
3DX SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CN1CCN(CC1)c2ccc(cc2)c3cc4c5cc(ncc5[nH]c4nc3)C#N"
3DX SMILES "OpenEye OEToolkits" 1.7.6 "CN1CCN(CC1)c2ccc(cc2)c3cc4c5cc(ncc5[nH]c4nc3)C#N"
#
_pdbx_chem_comp_identifier.comp_id 3DX
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier
"3-[4-(4-methylpiperazin-1-yl)phenyl]-9H-pyrrolo[2,3-b:5,4-c']dipyridine-6-carbonitrile"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
3DX 'Create component' 2014-07-30 RCSB
3DX 'Initial release' 2014-12-17 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
3DX N6 N 3.000 -0.373 1
3DX C22 C 3.999 0.745 2
3DX C9 C 4.999 1.864 3
3DX N3 N 4.516 3.350 4
3DX C10 C 5.570 4.503 5
3DX C7 C 7.093 4.154 6
3DX N2 N 8.307 5.036 7
3DX C2 C 9.521 4.154 8
3DX C8 C 6.529 1.551 9
3DX C6 C 7.557 2.728 10
3DX C1 C 9.057 2.728 11
3DX C5 C 10.085 1.551 12
3DX C4 C 11.615 1.864 13
3DX C3 C 12.098 3.350 14
3DX N1 N 11.044 4.503 15
3DX C11 C 12.615 0.745 16
3DX C16 C 14.083 1.052 17
3DX C15 C 15.082 -0.067 18
3DX C14 C 14.614 -1.492 19
3DX C13 C 13.145 -1.798 20
3DX C12 C 12.146 -0.679 21
3DX N4 N 15.613 -2.611 22
3DX C20 C 17.081 -2.304 23
3DX C19 C 18.081 -3.423 24
3DX N5 N 17.611 -4.848 25
3DX C21 C 18.611 -5.966 26
3DX C18 C 16.143 -5.154 27
3DX C17 C 15.144 -4.035 28
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
3DX N6 C22 TRIPLE NONE 1
3DX C22 C9 SINGLE NONE 2
3DX C9 C8 DOUBLE NONE 3
3DX C9 N3 SINGLE NONE 4
3DX C8 C6 SINGLE NONE 5
3DX N3 C10 DOUBLE NONE 6
3DX C15 C16 DOUBLE NONE 7
3DX C15 C14 SINGLE NONE 8
3DX C20 C19 SINGLE NONE 9
3DX C20 N4 SINGLE NONE 10
3DX C16 C11 SINGLE NONE 11
3DX C6 C7 DOUBLE NONE 12
3DX C6 C1 SINGLE NONE 13
3DX C10 C7 SINGLE NONE 14
3DX C5 C1 DOUBLE NONE 15
3DX C5 C4 SINGLE NONE 16
3DX C19 N5 SINGLE NONE 17
3DX C7 N2 SINGLE NONE 18
3DX C1 C2 SINGLE NONE 19
3DX N4 C14 SINGLE NONE 20
3DX N4 C17 SINGLE NONE 21
3DX C14 C13 DOUBLE NONE 22
3DX N5 C21 SINGLE NONE 23
3DX N5 C18 SINGLE NONE 24
3DX C11 C4 SINGLE NONE 25
3DX C11 C12 DOUBLE NONE 26
3DX C4 C3 DOUBLE NONE 27
3DX C17 C18 SINGLE NONE 28
3DX N2 C2 SINGLE NONE 29
3DX C2 N1 DOUBLE NONE 30
3DX C3 N1 SINGLE NONE 31
3DX C13 C12 SINGLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
3DX MurckoScaffold S1 scaffold 'c1cc2c(cn1)[nH]c1ncc(-c3ccc(N4CCNCC4)cc3)cc12' InChI=1S/C20H19N5/c1-3-16(25-9-7-21-8-10-25)4-2-14(1)15-11-18-17-5-6-22-13-19(17)24-20(18)23-12-15/h1-6,11-13,21H,7-10H2,(H,23,24) JBAFHLCCSPPVOV-UHFFFAOYSA-N
3DX phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
3DX piperazine F2 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
3DX pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
3DX pyrrole F4 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
3DX C9 S1 1
3DX N3 S1 1
3DX C10 S1 1
3DX C7 S1 1
3DX N2 S1 1
3DX C2 S1 1
3DX C8 S1 1
3DX C6 S1 1
3DX C1 S1 1
3DX C5 S1 1
3DX C4 S1 1
3DX C3 S1 1
3DX N1 S1 1
3DX C11 S1 1
3DX C16 S1 1
3DX C15 S1 1
3DX C14 S1 1
3DX C13 S1 1
3DX C12 S1 1
3DX N4 S1 1
3DX C20 S1 1
3DX C19 S1 1
3DX N5 S1 1
3DX C18 S1 1
3DX C17 S1 1
3DX C11 F1 1
3DX C16 F1 1
3DX C15 F1 1
3DX C14 F1 1
3DX C13 F1 1
3DX C12 F1 1
3DX N4 F2 1
3DX C20 F2 1
3DX C19 F2 1
3DX N5 F2 1
3DX C18 F2 1
3DX C17 F2 1
3DX C9 F3 1
3DX C8 F3 1
3DX C6 F3 1
3DX C7 F3 1
3DX C10 F3 1
3DX N3 F3 1
3DX C2 F3 2
3DX C1 F3 2
3DX C5 F3 2
3DX C4 F3 2
3DX C3 F3 2
3DX N1 F3 2
3DX C7 F4 1
3DX C6 F4 1
3DX C1 F4 1
3DX C2 F4 1
3DX N2 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 3DX
_pdbe_chem_comp_rdkit_properties.exactmw 368.175
_pdbe_chem_comp_rdkit_properties.amw 368.444
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 3
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.227
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 190.754
_pdbe_chem_comp_rdkit_properties.tpsa 71.840
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.729
_pdbe_chem_comp_rdkit_properties.CrippenMR 104.432
_pdbe_chem_comp_rdkit_properties.chi0v 13.683
_pdbe_chem_comp_rdkit_properties.chi1v 7.657
_pdbe_chem_comp_rdkit_properties.chi2v 3.707
_pdbe_chem_comp_rdkit_properties.chi3v 3.707
_pdbe_chem_comp_rdkit_properties.chi4v 2.449
_pdbe_chem_comp_rdkit_properties.chi0n 33.683
_pdbe_chem_comp_rdkit_properties.chi1n 17.604
_pdbe_chem_comp_rdkit_properties.chi2n 3.707
_pdbe_chem_comp_rdkit_properties.chi3n 3.707
_pdbe_chem_comp_rdkit_properties.chi4n 2.449
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.430
_pdbe_chem_comp_rdkit_properties.kappa1 5.786
_pdbe_chem_comp_rdkit_properties.kappa2 6.625
_pdbe_chem_comp_rdkit_properties.kappa3 2.862
_pdbe_chem_comp_rdkit_properties.Phi 1.369
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
3DX UniChem ChEMBL CHEMBL3359895
3DX UniChem PDBe 3DX
3DX UniChem SureChEMBL SCHEMBL12666259
3DX UniChem 'PubChem TPHARMA' 87228772
3DX UniChem PubChem 44545901
3DX UniChem BindingDb 50035709
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
3DX N6 -6.242 3.069 5.721 ETKDGv3 1
3DX C22 -5.229 2.530 5.875 ETKDGv3 2
3DX C9 -3.972 1.860 6.066 ETKDGv3 3
3DX N3 -3.511 1.583 7.411 ETKDGv3 4
3DX C10 -2.378 0.977 7.649 ETKDGv3 5
3DX C7 -1.546 0.566 6.511 ETKDGv3 6
3DX N2 -0.279 -0.102 6.574 ETKDGv3 7
3DX C2 0.072 -0.249 5.205 ETKDGv3 8
3DX C8 -3.229 1.495 5.002 ETKDGv3 9
3DX C6 -1.954 0.813 5.266 ETKDGv3 10
3DX C1 -0.944 0.306 4.352 ETKDGv3 11
3DX C5 -0.828 0.295 3.028 ETKDGv3 12
3DX C4 0.407 -0.323 2.454 ETKDGv3 13
3DX C3 1.342 -0.839 3.302 ETKDGv3 14
3DX N1 1.154 -0.789 4.736 ETKDGv3 15
3DX C11 0.586 -0.381 0.981 ETKDGv3 16
3DX C16 -0.581 -0.651 0.104 ETKDGv3 17
3DX C15 -0.439 -0.691 -1.226 ETKDGv3 18
3DX C14 0.890 -0.465 -1.852 ETKDGv3 19
3DX C13 1.947 -0.218 -1.055 ETKDGv3 20
3DX C12 1.790 -0.174 0.413 ETKDGv3 21
3DX N4 1.032 -0.497 -3.289 ETKDGv3 22
3DX C20 2.278 -0.956 -3.919 ETKDGv3 23
3DX C19 1.975 -1.610 -5.275 ETKDGv3 24
3DX N5 1.172 -0.751 -6.185 ETKDGv3 25
3DX C21 1.980 -0.262 -7.313 ETKDGv3 26
3DX C18 0.481 0.378 -5.523 ETKDGv3 27
3DX C17 -0.059 -0.017 -4.146 ETKDGv3 28
3DX H1 -2.063 0.785 8.666 ETKDGv3 29
3DX H2 0.259 -0.398 7.419 ETKDGv3 30
3DX H3 -3.551 1.691 3.987 ETKDGv3 31
3DX H4 -1.593 0.736 2.402 ETKDGv3 32
3DX H5 2.234 -1.316 2.916 ETKDGv3 33
3DX H6 -1.556 -0.840 0.536 ETKDGv3 34
3DX H7 -1.302 -0.907 -1.841 ETKDGv3 35
3DX H8 2.925 -0.022 -1.473 ETKDGv3 36
3DX H9 2.659 0.055 1.017 ETKDGv3 37
3DX H10 2.965 -0.094 -4.060 ETKDGv3 38
3DX H11 2.781 -1.710 -3.274 ETKDGv3 39
3DX H12 2.935 -1.933 -5.739 ETKDGv3 40
3DX H13 1.396 -2.540 -5.086 ETKDGv3 41
3DX H15 1.358 0.360 -7.993 ETKDGv3 42
3DX H16 2.841 0.342 -6.951 ETKDGv3 43
3DX H17 2.359 -1.120 -7.908 ETKDGv3 44
3DX H18 1.169 1.245 -5.395 ETKDGv3 45
3DX H19 -0.370 0.708 -6.158 ETKDGv3 46
3DX H20 -0.823 -0.816 -4.257 ETKDGv3 47
3DX H21 -0.537 0.876 -3.687 ETKDGv3 48
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