data_40V
#
_chem_comp.id 40V
_chem_comp.name
N-{[(3R)-1-(2,3-dihydro-1H-inden-2-yl)piperidin-3-yl]methyl}-8-hydroxy-N-(2-methoxyethyl)-5-nitroquinoline-7-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C28 H32 N4 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-01-08
_chem_comp.pdbx_modified_date 2015-07-02
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 504.577
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 40V
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4XII
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
40V C10 C1 C 0 1 Y N N N N N 2.193 -10.268 -14.341 -2.963 -0.130 -0.859 C10 40V 1
40V C13 C2 C 0 1 Y N N N N N 1.576 -10.928 -16.854 -4.680 1.355 -0.021 C13 40V 2
40V C15 C3 C 0 1 Y N N N N N 1.687 -9.868 -15.778 -3.388 1.160 -0.557 C15 40V 3
40V C17 C4 C 0 1 N N N N N N 7.627 -13.172 -11.463 6.160 1.273 -0.082 C17 40V 4
40V C20 C5 C 0 1 N N N N N N 6.526 -9.752 -14.902 1.082 1.123 -1.054 C20 40V 5
40V C21 C6 C 0 1 N N N N N N 7.302 -11.729 -13.738 3.464 1.849 -0.873 C21 40V 6
40V C22 C7 C 0 1 N N N N N N 5.548 -10.472 -12.778 2.968 -0.513 -1.088 C22 40V 7
40V C24 C8 C 0 1 N N N N N N 6.368 -12.304 -11.901 5.250 0.220 -0.750 C24 40V 8
40V C26 C9 C 0 1 N N N N N N 4.525 -8.607 -14.230 0.613 -1.318 -1.319 C26 40V 9
40V C28 C10 C 0 1 N N N N N N 3.144 -6.009 -12.841 -0.782 -1.168 1.637 C28 40V 10
40V C01 C11 C 0 1 Y N N N N N 6.884 -15.862 -8.454 9.656 0.088 1.035 C01 40V 11
40V C02 C12 C 0 1 Y N N N N N 5.677 -15.112 -7.867 9.396 -1.270 1.039 C02 40V 12
40V C03 C13 C 0 1 Y N N N N N 1.339 -12.919 -18.996 -7.189 1.712 1.016 C03 40V 13
40V C04 C14 C 0 1 Y N N N N N 1.837 -13.346 -17.641 -6.797 0.433 0.740 C04 40V 14
40V C05 C15 C 0 1 Y N N N N N 7.614 -15.281 -9.668 8.660 0.978 0.684 C05 40V 15
40V C06 C16 C 0 1 Y N N N N N 5.194 -13.789 -8.502 8.143 -1.734 0.692 C06 40V 16
40V C07 C17 C 0 1 Y N N N N N 2.582 -11.689 -14.029 -3.810 -1.231 -0.635 C07 40V 17
40V C08 C18 C 0 1 Y N N N N N 0.952 -11.471 -19.277 -6.308 2.770 0.798 C08 40V 18
40V C09 C19 C 0 1 Y N N N N N 1.954 -12.355 -16.558 -5.510 0.232 0.206 C09 40V 19
40V C11 C20 C 0 1 Y N N N N N 7.125 -13.954 -10.299 7.402 0.516 0.335 C11 40V 20
40V C12 C21 C 0 1 Y N N N N N 5.928 -13.223 -9.715 7.143 -0.842 0.339 C12 40V 21
40V C14 C22 C 0 1 Y N N N N N 2.481 -12.764 -15.098 -5.051 -1.059 -0.117 C14 40V 22
40V C16 C23 C 0 1 N N N N N N 2.303 -9.156 -13.233 -1.618 -0.344 -1.424 C16 40V 23
40V C18 C24 C 0 1 N N N N N N 5.689 -11.985 -10.511 5.708 -1.090 -0.074 C18 40V 24
40V C19 C25 C 0 1 N N N N N N 7.663 -10.557 -14.639 2.032 2.147 -0.425 C19 40V 25
40V C23 C26 C 0 1 N N R N N N 5.842 -9.313 -13.722 1.520 -0.286 -0.646 C23 40V 26
40V C25 C27 C 0 1 N N N N N N 1.340 -5.349 -14.257 -1.209 0.855 2.848 C25 40V 27
40V C27 C28 C 0 1 N N N N N N 3.675 -7.252 -12.219 -1.178 -1.931 0.371 C27 40V 28
40V N29 N1 N 0 1 Y N N N N N 1.075 -10.487 -18.210 -5.117 2.580 0.286 N29 40V 29
40V N30 N2 N 0 1 N N N N N N 6.691 -11.300 -12.521 3.836 0.490 -0.459 N30 40V 30
40V N31 N3 N 0 1 N N N N N N 3.540 -8.343 -13.238 -0.753 -1.174 -0.809 N31 40V 31
40V N32 N4 N 1 1 N N N N N N 2.874 -14.083 -14.692 -5.922 -2.233 0.121 N32 40V 32
40V O33 O1 O -1 1 N N N N N N 3.123 -14.317 -13.360 -6.630 -2.275 1.111 O33 40V 33
40V O34 O2 O 0 1 N N N N N N 1.405 -8.952 -12.417 -1.290 0.228 -2.446 O34 40V 34
40V O35 O3 O 0 1 N N N N N N 2.996 -14.983 -15.471 -5.929 -3.156 -0.673 O35 40V 35
40V O36 O4 O 0 1 N N N N N N 1.318 -8.524 -16.078 -2.570 2.218 -0.773 O36 40V 36
40V O37 O5 O 0 1 N N N N N N 1.813 -6.259 -13.307 -1.507 0.062 1.697 O37 40V 37
40V H1 H1 H 0 1 N N N N N N 7.946 -13.840 -12.277 6.416 2.057 -0.793 H1 40V 38
40V H2 H2 H 0 1 N N N N N N 8.467 -12.525 -11.169 5.667 1.700 0.791 H2 40V 39
40V H3 H3 H 0 1 N N N N N N 6.852 -8.864 -15.464 0.067 1.305 -0.703 H3 40V 40
40V H4 H4 H 0 1 N N N N N N 5.822 -10.335 -15.514 1.115 1.215 -2.140 H4 40V 41
40V H5 H5 H 0 1 N N N N N N 6.602 -12.387 -14.274 3.529 1.929 -1.959 H5 40V 42
40V H6 H6 H 0 1 N N N N N N 8.219 -12.287 -13.497 4.145 2.567 -0.415 H6 40V 43
40V H7 H7 H 0 1 N N N N N N 5.192 -10.061 -11.821 3.287 -1.510 -0.786 H7 40V 44
40V H8 H8 H 0 1 N N N N N N 4.759 -11.095 -13.225 3.035 -0.422 -2.172 H8 40V 45
40V H9 H9 H 0 1 N N N N N N 5.689 -12.962 -12.464 5.425 0.183 -1.825 H9 40V 46
40V H10 H10 H 0 1 N N N N N N 4.811 -7.647 -14.685 0.617 -1.157 -2.397 H10 40V 47
40V H11 H11 H 0 1 N N N N N N 4.069 -9.254 -14.994 0.979 -2.321 -1.100 H11 40V 48
40V H12 H12 H 0 1 N N N N N N 3.783 -5.717 -13.687 -1.018 -1.772 2.513 H12 40V 49
40V H13 H13 H 0 1 N N N N N N 3.129 -5.200 -12.096 0.287 -0.960 1.616 H13 40V 50
40V H14 H14 H 0 1 N N N N N N 7.214 -16.791 -8.014 10.635 0.452 1.307 H14 40V 51
40V H15 H15 H 0 1 N N N N N N 5.164 -15.513 -7.005 10.174 -1.968 1.313 H15 40V 52
40V H16 H16 H 0 1 N N N N N N 1.254 -13.652 -19.784 -8.170 1.901 1.426 H16 40V 53
40V H17 H17 H 0 1 N N N N N N 2.108 -14.376 -17.464 -7.466 -0.399 0.903 H17 40V 54
40V H18 H18 H 0 1 N N N N N N 8.468 -15.795 -10.083 8.864 2.039 0.681 H18 40V 55
40V H19 H19 H 0 1 N N N N N N 4.342 -13.268 -8.090 7.941 -2.795 0.695 H19 40V 56
40V H20 H20 H 0 1 N N N N N N 2.934 -11.945 -13.041 -3.467 -2.226 -0.880 H20 40V 57
40V H21 H21 H 0 1 N N N N N N 0.592 -11.179 -20.253 -6.630 3.777 1.020 H21 40V 58
40V H22 H22 H 0 1 N N N N N N 6.161 -11.113 -10.034 5.093 -1.300 0.801 H22 40V 59
40V H23 H23 H 0 1 N N N N N N 4.612 -11.798 -10.633 5.656 -1.919 -0.781 H23 40V 60
40V H24 H24 H 0 1 N N N N N N 8.059 -10.943 -15.590 1.751 3.150 -0.746 H24 40V 61
40V H25 H25 H 0 1 N N N N N N 8.431 -9.945 -14.143 1.969 2.081 0.661 H25 40V 62
40V H26 H26 H 0 1 N N N N N N 6.448 -8.566 -13.189 1.449 -0.390 0.437 H26 40V 63
40V H27 H27 H 0 1 N N N N N N 0.316 -5.624 -14.551 -1.454 0.294 3.749 H27 40V 64
40V H28 H28 H 0 1 N N N N N N 1.339 -4.337 -13.826 -0.149 1.106 2.852 H28 40V 65
40V H29 H29 H 0 1 N N N N N N 1.993 -5.370 -15.142 -1.799 1.772 2.819 H29 40V 66
40V H30 H30 H 0 1 N N N N N N 3.095 -7.502 -11.319 -0.693 -2.908 0.369 H30 40V 67
40V H31 H31 H 0 1 N N N N N N 4.732 -7.117 -11.948 -2.260 -2.062 0.348 H31 40V 68
40V H33 H33 H 0 1 N N N N N N 1.442 -7.982 -15.308 -2.007 2.440 -0.019 H33 40V 69
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
40V C08 C03 DOUB Y N 1
40V C08 N29 SING Y N 2
40V C03 C04 SING Y N 3
40V N29 C13 DOUB Y N 4
40V C04 C09 DOUB Y N 5
40V C13 C09 SING Y N 6
40V C13 C15 SING Y N 7
40V C09 C14 SING Y N 8
40V O36 C15 SING N N 9
40V C15 C10 DOUB Y N 10
40V O35 N32 DOUB N N 11
40V C14 N32 SING N N 12
40V C14 C07 DOUB Y N 13
40V C20 C19 SING N N 14
40V C20 C23 SING N N 15
40V N32 O33 SING N N 16
40V C19 C21 SING N N 17
40V C10 C07 SING Y N 18
40V C10 C16 SING N N 19
40V C25 O37 SING N N 20
40V C26 C23 SING N N 21
40V C26 N31 SING N N 22
40V C21 N30 SING N N 23
40V C23 C22 SING N N 24
40V O37 C28 SING N N 25
40V N31 C16 SING N N 26
40V N31 C27 SING N N 27
40V C16 O34 DOUB N N 28
40V C28 C27 SING N N 29
40V C22 N30 SING N N 30
40V N30 C24 SING N N 31
40V C24 C17 SING N N 32
40V C24 C18 SING N N 33
40V C17 C11 SING N N 34
40V C18 C12 SING N N 35
40V C11 C12 DOUB Y N 36
40V C11 C05 SING Y N 37
40V C12 C06 SING Y N 38
40V C05 C01 DOUB Y N 39
40V C06 C02 DOUB Y N 40
40V C01 C02 SING Y N 41
40V C17 H1 SING N N 42
40V C17 H2 SING N N 43
40V C20 H3 SING N N 44
40V C20 H4 SING N N 45
40V C21 H5 SING N N 46
40V C21 H6 SING N N 47
40V C22 H7 SING N N 48
40V C22 H8 SING N N 49
40V C24 H9 SING N N 50
40V C26 H10 SING N N 51
40V C26 H11 SING N N 52
40V C28 H12 SING N N 53
40V C28 H13 SING N N 54
40V C01 H14 SING N N 55
40V C02 H15 SING N N 56
40V C03 H16 SING N N 57
40V C04 H17 SING N N 58
40V C05 H18 SING N N 59
40V C06 H19 SING N N 60
40V C07 H20 SING N N 61
40V C08 H21 SING N N 62
40V C18 H22 SING N N 63
40V C18 H23 SING N N 64
40V C19 H24 SING N N 65
40V C19 H25 SING N N 66
40V C23 H26 SING N N 67
40V C25 H27 SING N N 68
40V C25 H28 SING N N 69
40V C25 H29 SING N N 70
40V C27 H30 SING N N 71
40V C27 H31 SING N N 72
40V O36 H33 SING N N 73
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
40V SMILES ACDLabs 12.01 "[O-][N+](=O)c1cc(c(O)c2ncccc12)C(=O)N(CCOC)CC5CCCN(C4Cc3ccccc3C4)C5"
40V InChI InChI 1.03 InChI=1S/C28H32N4O5/c1-37-13-12-31(28(34)24-16-25(32(35)36)23-9-4-10-29-26(23)27(24)33)18-19-6-5-11-30(17-19)22-14-20-7-2-3-8-21(20)15-22/h2-4,7-10,16,19,22,33H,5-6,11-15,17-18H2,1H3/t19-/m1/s1
40V InChIKey InChI 1.03 XTNPQSRETUCLAG-LJQANCHMSA-N
40V SMILES_CANONICAL CACTVS 3.385 COCCN(C[C@@H]1CCCN(C1)C2Cc3ccccc3C2)C(=O)c4cc(c5cccnc5c4O)[N+]([O-])=O
40V SMILES CACTVS 3.385 COCCN(C[CH]1CCCN(C1)C2Cc3ccccc3C2)C(=O)c4cc(c5cccnc5c4O)[N+]([O-])=O
40V SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 COCCN(C[C@@H]1CCCN(C1)C2Cc3ccccc3C2)C(=O)c4cc(c5cccnc5c4O)[N+](=O)[O-]
40V SMILES "OpenEye OEToolkits" 1.9.2 COCCN(CC1CCCN(C1)C2Cc3ccccc3C2)C(=O)c4cc(c5cccnc5c4O)[N+](=O)[O-]
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
40V "SYSTEMATIC NAME" ACDLabs 12.01 N-{[(3R)-1-(2,3-dihydro-1H-inden-2-yl)piperidin-3-yl]methyl}-8-hydroxy-N-(2-methoxyethyl)-5-nitroquinoline-7-carboxamide
40V "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 N-[[(3R)-1-(2,3-dihydro-1H-inden-2-yl)piperidin-3-yl]methyl]-N-(2-methoxyethyl)-5-nitro-8-oxidanyl-quinoline-7-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
40V 'Create component' 2015-01-08 EBI
40V 'Initial release' 2015-07-07 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
40V C10 C 16.706 -0.327 1
40V C13 C 19.304 -0.327 2
40V C15 C 18.005 -1.077 3
40V C17 C 7.458 -2.560 4
40V C20 C 11.509 1.173 5
40V C21 C 8.911 1.173 6
40V C22 C 10.210 -1.077 7
40V C24 C 7.612 -1.077 8
40V C26 C 12.809 -1.077 9
40V C28 C 12.809 1.923 10
40V C01 C 3.750 -4.173 11
40V C02 C 3.000 -2.874 12
40V C03 C 22.004 1.204 13
40V C04 C 20.645 1.975 14
40V C05 C 5.250 -4.173 15
40V C06 C 3.750 -1.575 16
40V C07 C 16.706 1.173 17
40V C08 C 22.004 -0.358 18
40V C09 C 19.304 1.173 19
40V C11 C 6.000 -2.874 20
40V C12 C 5.250 -1.575 21
40V C14 C 18.005 1.923 22
40V C16 C 15.406 -1.077 23
40V C18 C 6.251 -0.469 24
40V C19 C 10.210 1.923 25
40V C23 C 11.509 -0.327 26
40V C25 C 11.509 4.173 27
40V C27 C 14.107 1.173 28
40V N29 N 20.645 -1.129 29
40V N30 N 8.911 -0.327 30
40V N31 N 14.107 -0.327 31
40V N32 N 18.005 3.423 32
40V O33 O 19.304 4.173 33
40V O34 O 15.406 -2.577 34
40V O35 O 16.706 4.173 35
40V O36 O 18.005 -2.577 36
40V O37 O 12.809 3.423 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
40V C08 C03 SINGLE NONE 1
40V C08 N29 DOUBLE NONE 2
40V C03 C04 DOUBLE NONE 3
40V N29 C13 SINGLE NONE 4
40V C04 C09 SINGLE NONE 5
40V C13 C09 SINGLE NONE 6
40V C13 C15 DOUBLE NONE 7
40V C09 C14 DOUBLE NONE 8
40V O36 C15 SINGLE NONE 9
40V C15 C10 SINGLE NONE 10
40V O35 N32 DOUBLE NONE 11
40V C14 N32 SINGLE NONE 12
40V C14 C07 SINGLE NONE 13
40V C20 C19 SINGLE NONE 14
40V C20 C23 SINGLE NONE 15
40V N32 O33 SINGLE NONE 16
40V C19 C21 SINGLE NONE 17
40V C10 C07 DOUBLE NONE 18
40V C10 C16 SINGLE NONE 19
40V C25 O37 SINGLE NONE 20
40V C23 C26 SINGLE BEGINWEDGE 21
40V C26 N31 SINGLE NONE 22
40V C21 N30 SINGLE NONE 23
40V C23 C22 SINGLE NONE 24
40V O37 C28 SINGLE NONE 25
40V N31 C16 SINGLE NONE 26
40V N31 C27 SINGLE NONE 27
40V C16 O34 DOUBLE NONE 28
40V C28 C27 SINGLE NONE 29
40V C22 N30 SINGLE NONE 30
40V N30 C24 SINGLE NONE 31
40V C24 C17 SINGLE NONE 32
40V C24 C18 SINGLE NONE 33
40V C17 C11 SINGLE NONE 34
40V C18 C12 SINGLE NONE 35
40V C11 C12 DOUBLE NONE 36
40V C11 C05 SINGLE NONE 37
40V C12 C06 SINGLE NONE 38
40V C05 C01 DOUBLE NONE 39
40V C06 C02 DOUBLE NONE 40
40V C01 C02 SINGLE NONE 41
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
40V MurckoScaffold S1 scaffold 'O=C(NC[C@@H]1CCCN(C2Cc3ccccc3C2)C1)c1ccc2cccnc2c1' InChI=1S/C25H27N3O/c29-25(22-10-9-19-8-3-11-26-24(19)15-22)27-16-18-5-4-12-28(17-18)23-13-20-6-1-2-7-21(20)14-23/h1-3,6-11,15,18,23H,4-5,12-14,16-17H2,(H,27,29)/t18-/m0/s1 WQCCSTAONLAFLB-SFHVURJKSA-N
40V amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
40V phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
40V pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
40V quinoline F4 fragment c1ccc2ncccc2c1 InChI=1S/C9H7N/c1-2-6-9-8(4-1)5-3-7-10-9/h1-7H SMWDFEZZVXVKRB-UHFFFAOYSA-N
40V Z2092370954 F5 fragment CCN(C)C(=O)c1cccc(N)c1 InChI=1S/C10H14N2O/c1-3-12(2)10(13)8-5-4-6-9(11)7-8/h4-7H,3,11H2,1-2H3 URNKFNQWYLXELN-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
40V C10 S1 1
40V C13 S1 1
40V C15 S1 1
40V C17 S1 1
40V C20 S1 1
40V C21 S1 1
40V C22 S1 1
40V C24 S1 1
40V C26 S1 1
40V C01 S1 1
40V C02 S1 1
40V C03 S1 1
40V C04 S1 1
40V C05 S1 1
40V C06 S1 1
40V C07 S1 1
40V C08 S1 1
40V C09 S1 1
40V C11 S1 1
40V C12 S1 1
40V C14 S1 1
40V C16 S1 1
40V C18 S1 1
40V C19 S1 1
40V C23 S1 1
40V N29 S1 1
40V N30 S1 1
40V N31 S1 1
40V O34 S1 1
40V N31 F1 1
40V C16 F1 1
40V O34 F1 1
40V C10 F1 1
40V C10 F2 1
40V C15 F2 1
40V C13 F2 1
40V C09 F2 1
40V C14 F2 1
40V C07 F2 1
40V C01 F2 2
40V C05 F2 2
40V C11 F2 2
40V C12 F2 2
40V C06 F2 2
40V C02 F2 2
40V C13 F3 1
40V C09 F3 1
40V C04 F3 1
40V C03 F3 1
40V C08 F3 1
40V N29 F3 1
40V C07 F4 1
40V C14 F4 1
40V C09 F4 1
40V C13 F4 1
40V C15 F4 1
40V C10 F4 1
40V N29 F4 1
40V C08 F4 1
40V C03 F4 1
40V C04 F4 1
40V C28 F5 1
40V C27 F5 1
40V N31 F5 1
40V C26 F5 1
40V C16 F5 1
40V O34 F5 1
40V C10 F5 1
40V C15 F5 1
40V C13 F5 1
40V C09 F5 1
40V C14 F5 1
40V N32 F5 1
40V C07 F5 1
40V C23 F5 2
40V C26 F5 2
40V N31 F5 2
40V C27 F5 2
40V C16 F5 2
40V O34 F5 2
40V C10 F5 2
40V C15 F5 2
40V C13 F5 2
40V C09 F5 2
40V C14 F5 2
40V N32 F5 2
40V C07 F5 2
#
_pdbe_chem_comp_rdkit_properties.comp_id 40V
_pdbe_chem_comp_rdkit_properties.exactmw 504.237
_pdbe_chem_comp_rdkit_properties.amw 504.587
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 69
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.429
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 260.410
_pdbe_chem_comp_rdkit_properties.tpsa 109.040
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.381
_pdbe_chem_comp_rdkit_properties.CrippenMR 135.339
_pdbe_chem_comp_rdkit_properties.chi0v 17.830
_pdbe_chem_comp_rdkit_properties.chi1v 9.694
_pdbe_chem_comp_rdkit_properties.chi2v 4.579
_pdbe_chem_comp_rdkit_properties.chi3v 4.579
_pdbe_chem_comp_rdkit_properties.chi4v 3.049
_pdbe_chem_comp_rdkit_properties.chi0n 49.830
_pdbe_chem_comp_rdkit_properties.chi1n 25.602
_pdbe_chem_comp_rdkit_properties.chi2n 4.579
_pdbe_chem_comp_rdkit_properties.chi3n 4.579
_pdbe_chem_comp_rdkit_properties.chi4n 3.049
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.560
_pdbe_chem_comp_rdkit_properties.kappa1 7.298
_pdbe_chem_comp_rdkit_properties.kappa2 10.820
_pdbe_chem_comp_rdkit_properties.kappa3 5.144
_pdbe_chem_comp_rdkit_properties.Phi 2.134
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
40V UniChem PDBe 40V
40V UniChem ZINC ZINC000263621233
40V UniChem PubChem 91810430
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
40V C10 3.371 0.005 -0.025 ETKDGv3 1
40V C13 3.984 2.165 -1.001 ETKDGv3 2
40V C15 3.613 0.891 -1.199 ETKDGv3 3
40V C17 -4.871 0.528 -1.545 ETKDGv3 4
40V C20 -0.033 -0.996 -1.608 ETKDGv3 5
40V C21 -2.539 -1.309 -1.996 ETKDGv3 6
40V C22 -1.755 -0.826 0.252 ETKDGv3 7
40V C24 -4.000 -0.116 -0.438 ETKDGv3 8
40V C26 0.696 -1.233 0.827 ETKDGv3 9
40V C28 2.979 -3.749 1.901 ETKDGv3 10
40V C01 -7.493 3.128 -0.547 ETKDGv3 11
40V C02 -7.029 3.333 0.851 ETKDGv3 12
40V C03 4.648 4.886 -0.616 ETKDGv3 13
40V C04 4.457 4.151 0.485 ETKDGv3 14
40V C05 -6.864 2.250 -1.345 ETKDGv3 15
40V C06 -5.980 2.640 1.323 ETKDGv3 16
40V C07 3.521 0.497 1.217 ETKDGv3 17
40V C08 4.532 4.287 -1.962 ETKDGv3 18
40V C09 4.136 2.708 0.374 ETKDGv3 19
40V C11 -5.717 1.492 -0.806 ETKDGv3 20
40V C12 -5.308 1.672 0.434 ETKDGv3 21
40V C14 3.932 1.904 1.442 ETKDGv3 22
40V C16 3.015 -1.419 -0.197 ETKDGv3 23
40V C18 -4.104 0.871 0.752 ETKDGv3 24
40V C19 -1.138 -1.308 -2.629 ETKDGv3 25
40V C23 -0.423 -1.489 -0.205 ETKDGv3 26
40V C25 3.882 -5.859 1.558 ETKDGv3 27
40V C27 1.931 -3.449 0.825 ETKDGv3 28
40V N29 4.218 3.034 -2.118 ETKDGv3 29
40V N30 -2.596 -0.342 -0.878 ETKDGv3 30
40V N31 1.908 -2.012 0.518 ETKDGv3 31
40V N32 4.119 2.365 2.789 ETKDGv3 32
40V O33 5.269 3.036 3.134 ETKDGv3 33
40V O34 3.726 -2.136 -0.951 ETKDGv3 34
40V O35 3.372 1.946 3.696 ETKDGv3 35
40V O36 3.438 0.434 -2.508 ETKDGv3 36
40V O37 2.922 -5.113 2.274 ETKDGv3 37
40V H1 -4.250 1.086 -2.279 ETKDGv3 38
40V H2 -5.499 -0.231 -2.060 ETKDGv3 39
40V H3 0.904 -1.487 -1.947 ETKDGv3 40
40V H4 0.146 0.102 -1.577 ETKDGv3 41
40V H5 -3.265 -1.057 -2.797 ETKDGv3 42
40V H6 -2.791 -2.332 -1.635 ETKDGv3 43
40V H7 -2.313 -1.560 0.877 ETKDGv3 44
40V H8 -1.516 0.043 0.902 ETKDGv3 45
40V H9 -4.469 -1.082 -0.137 ETKDGv3 46
40V H10 0.914 -0.146 0.867 ETKDGv3 47
40V H11 0.336 -1.516 1.841 ETKDGv3 48
40V H12 3.992 -3.421 1.565 ETKDGv3 49
40V H13 2.737 -3.141 2.799 ETKDGv3 50
40V H14 -8.336 3.694 -0.922 ETKDGv3 51
40V H15 -7.537 4.047 1.486 ETKDGv3 52
40V H16 4.877 5.940 -0.524 ETKDGv3 53
40V H17 4.512 4.642 1.447 ETKDGv3 54
40V H18 -7.190 2.100 -2.366 ETKDGv3 55
40V H19 -5.632 2.789 2.337 ETKDGv3 56
40V H20 3.371 -0.148 2.076 ETKDGv3 57
40V H21 4.699 4.906 -2.833 ETKDGv3 58
40V H22 -4.226 0.333 1.717 ETKDGv3 59
40V H23 -3.233 1.560 0.794 ETKDGv3 60
40V H24 -1.096 -0.552 -3.442 ETKDGv3 61
40V H25 -0.953 -2.304 -3.087 ETKDGv3 62
40V H26 -0.593 -2.588 -0.267 ETKDGv3 63
40V H27 3.750 -6.932 1.802 ETKDGv3 64
40V H28 3.753 -5.745 0.459 ETKDGv3 65
40V H29 4.912 -5.568 1.859 ETKDGv3 66
40V H30 0.939 -3.785 1.199 ETKDGv3 67
40V H31 2.146 -4.027 -0.099 ETKDGv3 68
40V H33 3.094 -0.492 -2.724 ETKDGv3 69
#