data_418
#
_chem_comp.id 418
_chem_comp.name
;2-{4-[2-(S)-ALLYLOXYCARBONYLAMINO-3-{4-[(2-CARBOXY-PHENYL)-OXALYL-AMINO]-PHENYL}-PROPIONYLAMINO]-BUTOXY}-6-HYDROXY-BENZ
OIC ACID METHYL ESTER
;
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C34 H35 N3 O12"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
;COMPOUND 6; N-(ALLYLOXYCARBONYL)-4-[N-(CARBOXY-FORMYL)-2-(BENZOIC
ACID)-AMINO]-L-PHENYLALANINYL-AMINO-BUTYLOXY-(6-HYDROXY-BENZOIC ACID METHYL ESTER)
;
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2003-06-05
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 677.655
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 418
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1PH0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
418 O6 O6 O 0 1 N N N N N N 35.733 29.891 23.400 -1.834 14.073 -1.901 O6 418 1
418 C24 C24 C 0 1 N N N N N N 34.813 29.177 23.711 -1.431 12.868 -1.472 C24 418 2
418 O7 O7 O 0 1 N N N N N N 33.970 29.580 24.514 -0.556 12.165 -1.936 O7 418 3
418 C8 C8 C 0 1 N N N N N N 34.680 27.765 23.076 -2.181 12.500 -0.225 C8 418 4
418 O5 O5 O 0 1 N N N N N N 34.913 26.814 23.831 -2.991 13.342 0.150 O5 418 5
418 N4 N4 N 0 1 N N N N N N 34.261 27.577 21.732 -1.942 11.224 0.373 N4 418 6
418 C2 C2 C 0 1 Y N N N N N 33.783 28.680 20.985 -2.620 10.848 1.533 C2 418 7
418 C3 C3 C 0 1 Y N N N N N 32.467 29.202 21.327 -3.022 11.817 2.452 C3 418 8
418 C4 C4 C 0 1 Y N N N N N 31.922 30.288 20.611 -3.700 11.441 3.611 C4 418 9
418 C5 C5 C 0 1 Y N N N N N 32.671 30.871 19.543 -3.968 10.100 3.837 C5 418 10
418 C6 C6 C 0 1 Y N N N N N 33.982 30.382 19.179 -3.575 9.126 2.933 C6 418 11
418 C1 C1 C 0 1 Y N N N N N 34.548 29.274 19.906 -2.897 9.502 1.773 C1 418 12
418 C7 C7 C 0 1 N N N N N N 31.999 32.018 18.793 -4.701 9.693 5.092 C7 418 13
418 C9 C9 C 0 1 N N S N N N 31.368 31.580 17.425 -3.756 9.401 6.262 C9 418 14
418 N1 N1 N 0 1 N N N N N N 30.718 32.764 16.817 -2.825 8.342 5.960 N1 418 15
418 C10 C10 C 0 1 N N N N N N 30.657 32.942 15.474 -1.453 8.489 6.005 C10 418 16
418 O4 O4 O 0 1 N N N N N N 31.104 32.188 14.611 -0.853 9.517 6.303 O4 418 17
418 O23 O23 O 0 1 N N N N N N 29.948 34.227 15.084 -0.850 7.310 5.667 O23 418 18
418 C40 C40 C 0 1 N N N N N N ? ? ? 0.582 7.317 5.672 C40 418 19
418 C41 C41 C 0 1 N N N N N N ? ? ? 1.070 5.961 5.282 C41 418 20
418 C42 C42 C 0 1 N N N N N N ? ? ? 1.843 5.723 4.217 C42 418 21
418 C11 C11 C 0 1 N N N N N N 30.482 30.323 17.577 -4.550 8.966 7.489 C11 418 22
418 O8 O8 O 0 1 N N N N N N 30.958 29.192 17.430 -4.430 7.856 8.004 O8 418 23
418 N2 N2 N 0 1 N N N N N N 29.193 30.586 17.909 -5.367 9.981 7.966 N2 418 24
418 C12 C12 C 0 1 N N N N N N 28.265 29.464 18.110 -6.189 9.849 9.147 C12 418 25
418 C13 C13 C 0 1 N N N N N N 27.251 29.764 19.226 -7.583 9.314 8.833 C13 418 26
418 C15 C15 C 0 1 N N N N N N 27.867 30.480 20.448 -8.349 10.209 7.858 C15 418 27
418 C14 C14 C 0 1 N N N N N N 26.844 30.779 21.550 -9.750 9.676 7.591 C14 418 28
418 O1 O1 O 0 1 N N N N N N 26.158 29.565 21.914 -10.412 10.555 6.693 O1 418 29
418 C32 C32 C 0 1 Y N N N N N 24.855 29.623 22.461 -11.337 9.996 5.849 C32 418 30
418 C33 C33 C 0 1 Y N N N N N 24.159 30.860 22.697 -12.434 9.340 6.399 C33 418 31
418 C34 C34 C 0 1 Y N N N N N 22.851 30.845 23.248 -13.387 8.764 5.559 C34 418 32
418 C35 C35 C 0 1 Y N N N N N 22.233 29.615 23.577 -13.238 8.847 4.175 C35 418 33
418 C36 C36 C 0 1 Y N N N N N 22.888 28.380 23.359 -12.136 9.506 3.630 C36 418 34
418 O13 O13 O 0 1 N N N N N N 22.291 27.350 23.669 -12.011 9.575 2.275 O13 418 35
418 C37 C37 C 0 1 Y N N N N N 24.214 28.380 22.809 -11.183 10.083 4.470 C37 418 36
418 C38 C38 C 0 1 N N N N N N 24.920 27.098 22.578 -10.031 10.771 3.900 C38 418 37
418 O11 O11 O 0 1 N N N N N N 25.169 26.330 23.480 -10.006 11.976 3.623 O11 418 38
418 O12 O12 O 0 1 N N N N N N 25.245 26.900 21.292 -8.981 9.916 3.712 O12 418 39
418 C39 C39 C 0 1 N N N N N N 25.956 25.696 20.836 -7.786 10.476 3.157 C39 418 40
418 C26 C26 C 0 1 Y N N N N N 34.193 26.256 21.148 -0.977 10.321 -0.246 C26 418 41
418 C27 C27 C 0 1 Y N N N N N 32.920 25.884 20.545 -1.461 9.455 -1.186 C27 418 42
418 C28 C28 C 0 1 Y N N N N N 32.727 24.612 19.932 -0.557 8.584 -1.792 C28 418 43
418 C29 C29 C 0 1 Y N N N N N 33.793 23.674 19.870 0.790 8.616 -1.433 C29 418 44
418 C30 C30 C 0 1 Y N N N N N 35.057 23.986 20.438 1.234 9.519 -0.468 C30 418 45
418 C25 C25 C 0 1 Y N N N N N 35.291 25.272 21.064 0.329 10.391 0.139 C25 418 46
418 C31 C31 C 0 1 N N N N N N 36.665 25.462 21.605 0.825 11.323 1.144 C31 418 47
418 O9 O9 O 0 1 N N N N N N 37.190 24.576 22.248 0.350 12.436 1.380 O9 418 48
418 O10 O10 O 0 1 N N N N N N 37.315 26.490 21.440 1.897 10.831 1.821 O10 418 49
418 HO6 HO6 H 0 1 N N N N N N 35.660 30.720 23.858 -1.329 14.375 -2.686 HO6 418 50
418 H3 H3 H 0 1 N N N N N N 31.905 28.755 22.134 -2.812 12.869 2.275 H3 418 51
418 H4 H4 H 0 1 N N N N N N 30.947 30.676 20.868 -4.008 12.203 4.322 H4 418 52
418 H6 H6 H 0 1 N N N N N N 34.531 30.842 18.371 -3.786 8.075 3.112 H6 418 53
418 H1 H1 H 0 1 N N N N N N 35.526 28.892 19.651 -2.589 8.738 1.064 H1 418 54
418 H71 1H7 H 0 1 N N N N N N 31.197 32.421 19.428 -5.420 10.475 5.369 H71 418 55
418 H72 2H7 H 0 1 N N N N N N 32.776 32.765 18.572 -5.311 8.809 4.862 H72 418 56
418 H9 H9 H 0 1 N N N N N N 32.140 31.245 16.717 -3.155 10.281 6.518 H9 418 57
418 HN1 HN1 H 0 1 N N N N N N 30.311 33.454 17.416 -3.201 7.435 5.697 HN1 418 58
418 H401 1H40 H 0 0 N N N N N N ? ? ? 0.930 8.095 4.985 H401 418 59
418 H402 2H40 H 0 0 N N N N N N ? ? ? 0.927 7.559 6.683 H402 418 60
418 H41 H41 H 0 1 N N N N N N ? ? ? 0.781 5.125 5.914 H41 418 61
418 H421 1H42 H 0 0 N N N N N N ? ? ? 2.175 4.721 3.970 H421 418 62
418 H422 2H42 H 0 0 N N N N N N ? ? ? 2.156 6.537 3.572 H422 418 63
418 HN2 HN2 H 0 1 N N N N N N 28.879 31.529 18.015 -5.388 10.861 7.459 HN2 418 64
418 H121 1H12 H 0 0 N N N N N N 27.718 29.284 17.173 -6.262 10.844 9.597 H121 418 65
418 H122 2H12 H 0 0 N N N N N N 28.850 28.579 18.402 -5.664 9.193 9.848 H122 418 66
418 H131 1H13 H 0 0 N N N N N N 26.467 30.413 18.809 -8.157 9.207 9.762 H131 418 67
418 H132 2H13 H 0 0 N N N N N N 26.862 28.797 19.579 -7.483 8.312 8.399 H132 418 68
418 H151 1H15 H 0 0 N N N N N N 28.649 29.831 20.870 -7.804 10.287 6.909 H151 418 69
418 H152 2H15 H 0 0 N N N N N N 28.266 31.444 20.099 -8.422 11.231 8.248 H152 418 70
418 H141 1H14 H 0 0 N N N N N N 27.363 31.185 22.431 -10.330 9.622 8.518 H141 418 71
418 H142 2H14 H 0 0 N N N N N N 26.114 31.515 21.182 -9.710 8.680 7.138 H142 418 72
418 H33 H33 H 0 1 N N N N N N 24.632 31.800 22.455 -12.556 9.271 7.477 H33 418 73
418 H34 H34 H 0 1 N N N N N N 22.326 31.774 23.416 -14.245 8.250 5.984 H34 418 74
418 H35 H35 H 0 1 N N N N N N 21.241 29.619 24.003 -13.984 8.395 3.527 H35 418 75
418 H13 H13 H 0 1 N N N N N N 22.137 26.826 22.891 -11.073 9.609 2.027 H13 418 76
418 H391 1H39 H 0 0 N N N N N N 26.134 25.763 19.752 -7.312 11.129 3.894 H391 418 77
418 H392 2H39 H 0 0 N N N N N N 26.919 25.618 21.361 -8.033 11.045 2.257 H392 418 78
418 H393 3H39 H 0 0 N N N N N N 25.347 24.806 21.053 -7.101 9.666 2.897 H393 418 79
418 H27 H27 H 0 1 N N N N N N 32.102 26.590 20.563 -2.509 9.420 -1.474 H27 418 80
418 H28 H28 H 0 1 N N N N N N 31.765 24.359 19.512 -0.902 7.879 -2.544 H28 418 81
418 H29 H29 H 0 1 N N N N N N 33.641 22.719 19.389 1.494 7.937 -1.906 H29 418 82
418 H30 H30 H 0 1 N N N N N N 35.853 23.257 20.403 2.286 9.534 -0.197 H30 418 83
418 H10 H10 H 0 1 N N N N N N 38.159 26.404 21.868 2.238 11.451 2.501 H10 418 84
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
418 O6 C24 SING N N 1
418 O6 HO6 SING N N 2
418 C24 O7 DOUB N N 3
418 C24 C8 SING N N 4
418 C8 O5 DOUB N N 5
418 C8 N4 SING N N 6
418 N4 C2 SING N N 7
418 N4 C26 SING N N 8
418 C2 C3 DOUB Y N 9
418 C2 C1 SING Y N 10
418 C3 C4 SING Y N 11
418 C3 H3 SING N N 12
418 C4 C5 DOUB Y N 13
418 C4 H4 SING N N 14
418 C5 C6 SING Y N 15
418 C5 C7 SING N N 16
418 C6 C1 DOUB Y N 17
418 C6 H6 SING N N 18
418 C1 H1 SING N N 19
418 C7 C9 SING N N 20
418 C7 H71 SING N N 21
418 C7 H72 SING N N 22
418 C9 N1 SING N N 23
418 C9 C11 SING N N 24
418 C9 H9 SING N N 25
418 N1 C10 SING N N 26
418 N1 HN1 SING N N 27
418 C10 O4 DOUB N N 28
418 C10 O23 SING N N 29
418 O23 C40 SING N N 30
418 C40 C41 SING N N 31
418 C40 H401 SING N N 32
418 C40 H402 SING N N 33
418 C41 C42 DOUB N N 34
418 C41 H41 SING N N 35
418 C42 H421 SING N N 36
418 C42 H422 SING N N 37
418 C11 O8 DOUB N N 38
418 C11 N2 SING N N 39
418 N2 C12 SING N N 40
418 N2 HN2 SING N N 41
418 C12 C13 SING N N 42
418 C12 H121 SING N N 43
418 C12 H122 SING N N 44
418 C13 C15 SING N N 45
418 C13 H131 SING N N 46
418 C13 H132 SING N N 47
418 C15 C14 SING N N 48
418 C15 H151 SING N N 49
418 C15 H152 SING N N 50
418 C14 O1 SING N N 51
418 C14 H141 SING N N 52
418 C14 H142 SING N N 53
418 O1 C32 SING N N 54
418 C32 C33 DOUB Y N 55
418 C32 C37 SING Y N 56
418 C33 C34 SING Y N 57
418 C33 H33 SING N N 58
418 C34 C35 DOUB Y N 59
418 C34 H34 SING N N 60
418 C35 C36 SING Y N 61
418 C35 H35 SING N N 62
418 C36 O13 SING N N 63
418 C36 C37 DOUB Y N 64
418 O13 H13 SING N N 65
418 C37 C38 SING N N 66
418 C38 O11 DOUB N N 67
418 C38 O12 SING N N 68
418 O12 C39 SING N N 69
418 C39 H391 SING N N 70
418 C39 H392 SING N N 71
418 C39 H393 SING N N 72
418 C26 C27 DOUB Y N 73
418 C26 C25 SING Y N 74
418 C27 C28 SING Y N 75
418 C27 H27 SING N N 76
418 C28 C29 DOUB Y N 77
418 C28 H28 SING N N 78
418 C29 C30 SING Y N 79
418 C29 H29 SING N N 80
418 C30 C25 DOUB Y N 81
418 C30 H30 SING N N 82
418 C25 C31 SING N N 83
418 C31 O9 DOUB N N 84
418 C31 O10 SING N N 85
418 O10 H10 SING N N 86
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
418 SMILES ACDLabs 10.04 O=C(O)c1ccccc1N(C(=O)C(=O)O)c2ccc(cc2)CC(NC(=O)OC/C=C)C(=O)NCCCCOc3cccc(O)c3C(=O)OC
418 SMILES_CANONICAL CACTVS 3.341 COC(=O)c1c(O)cccc1OCCCCNC(=O)[C@H](Cc2ccc(cc2)N(C(=O)C(O)=O)c3ccccc3C(O)=O)NC(=O)OCC=C
418 SMILES CACTVS 3.341 COC(=O)c1c(O)cccc1OCCCCNC(=O)[CH](Cc2ccc(cc2)N(C(=O)C(O)=O)c3ccccc3C(O)=O)NC(=O)OCC=C
418 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 COC(=O)c1c(cccc1OCCCCNC(=O)[C@H](Cc2ccc(cc2)N(c3ccccc3C(=O)O)C(=O)C(=O)O)NC(=O)OCC=C)O
418 SMILES "OpenEye OEToolkits" 1.5.0 COC(=O)c1c(cccc1OCCCCNC(=O)C(Cc2ccc(cc2)N(c3ccccc3C(=O)O)C(=O)C(=O)O)NC(=O)OCC=C)O
418 InChI InChI 1.03 InChI=1S/C34H35N3O12/c1-3-18-49-34(46)36-24(29(39)35-17-6-7-19-48-27-12-8-11-26(38)28(27)33(45)47-2)20-21-13-15-22(16-14-21)37(30(40)32(43)44)25-10-5-4-9-23(25)31(41)42/h3-5,8-16,24,38H,1,6-7,17-20H2,2H3,(H,35,39)(H,36,46)(H,41,42)(H,43,44)/t24-/m0/s1
418 InChIKey InChI 1.03 JTJBRKLISQICDU-DEOSSOPVSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
418 "SYSTEMATIC NAME" ACDLabs 10.04 "2-[(carboxycarbonyl){4-[(2S)-3-({4-[3-hydroxy-2-(methoxycarbonyl)phenoxy]butyl}amino)-3-oxo-2-{[(prop-2-en-1-yloxy)carbonyl]amino}propyl]phenyl}amino]benzoic acid"
418 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[carboxycarbonyl-[4-[(2S)-3-[4-(3-hydroxy-2-methoxycarbonyl-phenoxy)butylamino]-3-oxo-2-(prop-2-enoxycarbonylamino)propyl]phenyl]amino]benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
418 'Create component' 2003-06-05 RCSB
418 'Modify descriptor' 2011-06-04 RCSB
418 'Modify synonyms' 2020-06-05 PDBE
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 418 "COMPOUND 6" ? ?
2 418 "N-(ALLYLOXYCARBONYL)-4-[N-(CARBOXY-FORMYL)-2-(BENZOIC ACID)-AMINO]-L-PHENYLALANINYL-AMINO-BUTYLOXY-(6-HYDROXY-BENZOIC ACID METHYL ESTER)" ? ?
#
_pdbe_chem_comp_drugbank_details.comp_id 418
_pdbe_chem_comp_drugbank_details.drugbank_id DB04088
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name
'2-[{4-[(2S)-2-{[(Allyloxy)carbonyl]amino}-3-({4-[3-hydroxy-2-(methoxycarbonyl)phenoxy]butyl}amino)-3-oxopropyl]phenyl}(carboxycarbonyl)amino]benzoic acid'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
418 'COMPOUND 6' wwPDB ?
418 'N-(ALLYLOXYCARBONYL)-4-[N-(CARBOXY-FORMYL)-2-(BENZOIC ACID)-AMINO]-L-PHENYLALANINYL-AMINO-BUTYLOXY-(6-HYDROXY-BENZOIC ACID METHYL ESTER)' wwPDB ?
#
_pdbe_chem_comp_drugbank_classification.comp_id 418
_pdbe_chem_comp_drugbank_classification.drugbank_id DB04088
_pdbe_chem_comp_drugbank_classification.parent 'Phenylalanine and derivatives'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Carboxylic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as phenylalanine and derivatives. These are compounds containing phenylalanine or a derivative thereof resulting from reaction of phenylalanine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom.'
#
_pdbe_chem_comp_drugbank_targets.comp_id 418
_pdbe_chem_comp_drugbank_targets.drugbank_id DB04088
_pdbe_chem_comp_drugbank_targets.name 'Tyrosine-protein phosphatase non-receptor type 1'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P18031
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
418 O6 O 4.607 -0.375 1
418 C24 C 5.906 -1.125 2
418 O7 O 7.205 -0.375 3
418 C8 C 5.906 -2.625 4
418 O5 O 4.607 -3.375 5
418 N4 N 7.205 -3.375 6
418 C2 C 8.504 -2.625 7
418 C3 C 8.504 -1.125 8
418 C4 C 9.803 -0.375 9
418 C5 C 11.102 -1.125 10
418 C6 C 11.102 -2.625 11
418 C1 C 9.803 -3.375 12
418 C7 C 12.401 -0.375 13
418 C9 C 12.401 1.125 14
418 N1 N 11.102 1.875 15
418 C10 C 11.102 3.375 16
418 O4 O 12.401 4.125 17
418 O23 O 9.803 4.125 18
418 C40 C 9.803 5.625 19
418 C41 C 8.504 6.375 20
418 C42 C 8.504 7.875 21
418 C11 C 13.700 1.875 22
418 O8 O 13.700 3.375 23
418 N2 N 14.999 1.125 24
418 C12 C 16.298 1.875 25
418 C13 C 17.597 1.125 26
418 C15 C 18.896 1.875 27
418 C14 C 20.195 1.125 28
418 O1 O 21.495 1.875 29
418 C32 C 22.794 1.125 30
418 C33 C 22.794 -0.375 31
418 C34 C 24.093 -1.125 32
418 C35 C 25.392 -0.375 33
418 C36 C 25.392 1.125 34
418 O13 O 26.691 1.875 35
418 C37 C 24.093 1.875 36
418 C38 C 24.093 3.375 37
418 O11 O 22.794 4.125 38
418 O12 O 25.392 4.125 39
418 C39 C 25.392 5.625 40
418 C26 C 7.205 -4.875 41
418 C27 C 8.504 -5.625 42
418 C28 C 8.504 -7.125 43
418 C29 C 7.205 -7.875 44
418 C30 C 5.906 -7.125 45
418 C25 C 5.906 -5.625 46
418 C31 C 4.429 -5.885 47
418 O9 O 3.916 -7.295 48
418 O10 O 3.465 -4.736 49
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
418 O6 C24 SINGLE NONE 1
418 C24 O7 DOUBLE NONE 2
418 C24 C8 SINGLE NONE 3
418 C8 O5 DOUBLE NONE 4
418 C8 N4 SINGLE NONE 5
418 N4 C2 SINGLE NONE 6
418 N4 C26 SINGLE NONE 7
418 C2 C3 DOUBLE NONE 8
418 C2 C1 SINGLE NONE 9
418 C3 C4 SINGLE NONE 10
418 C4 C5 DOUBLE NONE 11
418 C5 C6 SINGLE NONE 12
418 C5 C7 SINGLE NONE 13
418 C6 C1 DOUBLE NONE 14
418 C9 C7 SINGLE BEGINDASH 15
418 C9 N1 SINGLE NONE 16
418 C9 C11 SINGLE NONE 17
418 N1 C10 SINGLE NONE 18
418 C10 O4 DOUBLE NONE 19
418 C10 O23 SINGLE NONE 20
418 O23 C40 SINGLE NONE 21
418 C40 C41 SINGLE NONE 22
418 C41 C42 DOUBLE NONE 23
418 C11 O8 DOUBLE NONE 24
418 C11 N2 SINGLE NONE 25
418 N2 C12 SINGLE NONE 26
418 C12 C13 SINGLE NONE 27
418 C13 C15 SINGLE NONE 28
418 C15 C14 SINGLE NONE 29
418 C14 O1 SINGLE NONE 30
418 O1 C32 SINGLE NONE 31
418 C32 C33 DOUBLE NONE 32
418 C32 C37 SINGLE NONE 33
418 C33 C34 SINGLE NONE 34
418 C34 C35 DOUBLE NONE 35
418 C35 C36 SINGLE NONE 36
418 C36 O13 SINGLE NONE 37
418 C36 C37 DOUBLE NONE 38
418 C37 C38 SINGLE NONE 39
418 C38 O11 DOUBLE NONE 40
418 C38 O12 SINGLE NONE 41
418 O12 C39 SINGLE NONE 42
418 C26 C27 DOUBLE NONE 43
418 C26 C25 SINGLE NONE 44
418 C27 C28 SINGLE NONE 45
418 C28 C29 DOUBLE NONE 46
418 C29 C30 SINGLE NONE 47
418 C30 C25 DOUBLE NONE 48
418 C25 C31 SINGLE NONE 49
418 C31 O9 DOUBLE NONE 50
418 C31 O10 SINGLE NONE 51
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
418 MurckoScaffold S1 scaffold O=C(CCc1ccc(Nc2ccccc2)cc1)NCCCCOc1ccccc1 InChI=1S/C25H28N2O2/c28-25(26-19-7-8-20-29-24-11-5-2-6-12-24)18-15-21-13-16-23(17-14-21)27-22-9-3-1-4-10-22/h1-6,9-14,16-17,27H,7-8,15,18-20H2,(H,26,28) SOTKIRXFUYPFCI-UHFFFAOYSA-N
418 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
418 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
418 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
418 Z223688272 F4 fragment CC(=O)N(C)c1ccccc1C(=O)O InChI=1S/C10H11NO3/c1-7(12)11(2)9-6-4-3-5-8(9)10(13)14/h3-6H,1-2H3,(H,13,14) VCOQVAJFXPHUAM-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
418 N4 S1 1
418 C2 S1 1
418 C3 S1 1
418 C4 S1 1
418 C5 S1 1
418 C6 S1 1
418 C1 S1 1
418 C7 S1 1
418 C9 S1 1
418 C11 S1 1
418 O8 S1 1
418 N2 S1 1
418 C12 S1 1
418 C13 S1 1
418 C15 S1 1
418 C14 S1 1
418 O1 S1 1
418 C32 S1 1
418 C33 S1 1
418 C34 S1 1
418 C35 S1 1
418 C36 S1 1
418 C37 S1 1
418 C26 S1 1
418 C27 S1 1
418 C28 S1 1
418 C29 S1 1
418 C30 S1 1
418 C25 S1 1
418 N4 F1 1
418 C8 F1 1
418 O5 F1 1
418 C24 F1 1
418 N2 F1 2
418 C11 F1 2
418 O8 F1 2
418 C9 F1 2
418 O7 F2 1
418 C24 F2 1
418 C8 F2 1
418 N4 F2 1
418 O8 F2 2
418 C11 F2 2
418 C9 F2 2
418 N1 F2 2
418 C2 F3 1
418 C3 F3 1
418 C4 F3 1
418 C5 F3 1
418 C6 F3 1
418 C1 F3 1
418 C32 F3 2
418 C33 F3 2
418 C34 F3 2
418 C35 F3 2
418 C36 F3 2
418 C37 F3 2
418 C26 F3 3
418 C27 F3 3
418 C28 F3 3
418 C29 F3 3
418 C30 F3 3
418 C25 F3 3
418 C2 F4 1
418 N4 F4 1
418 C8 F4 1
418 O5 F4 1
418 C24 F4 1
418 C26 F4 1
418 C27 F4 1
418 C28 F4 1
418 C29 F4 1
418 C30 F4 1
418 C25 F4 1
418 C31 F4 1
418 O9 F4 1
418 O10 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 418
_pdbe_chem_comp_rdkit_properties.exactmw 677.222
_pdbe_chem_comp_rdkit_properties.amw 677.663
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 15
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 18
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 49
_pdbe_chem_comp_rdkit_properties.NumAtoms 84
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 15
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.235
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 329.797
_pdbe_chem_comp_rdkit_properties.tpsa 218.100
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.575
_pdbe_chem_comp_rdkit_properties.CrippenMR 170.317
_pdbe_chem_comp_rdkit_properties.chi0v 23.241
_pdbe_chem_comp_rdkit_properties.chi1v 11.877
_pdbe_chem_comp_rdkit_properties.chi2v 4.730
_pdbe_chem_comp_rdkit_properties.chi3v 4.730
_pdbe_chem_comp_rdkit_properties.chi4v 2.886
_pdbe_chem_comp_rdkit_properties.chi0n 58.241
_pdbe_chem_comp_rdkit_properties.chi1n 28.996
_pdbe_chem_comp_rdkit_properties.chi2n 4.730
_pdbe_chem_comp_rdkit_properties.chi3n 4.730
_pdbe_chem_comp_rdkit_properties.chi4n 2.886
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -6.380
_pdbe_chem_comp_rdkit_properties.kappa1 11.646
_pdbe_chem_comp_rdkit_properties.kappa2 18.086
_pdbe_chem_comp_rdkit_properties.kappa3 10.306
_pdbe_chem_comp_rdkit_properties.Phi 4.298
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
418 UniChem ChEMBL CHEMBL325029
418 UniChem DrugBank DB04088
418 UniChem PDBe 418
418 UniChem ZINC ZINC000027090034
418 UniChem 'PubChem TPHARMA' 15311999
418 UniChem BindingDb 50131545
418 UniChem 'Probes And Drugs' PD059391
418 UniChem PubChem 10305301
418 UniChem SureChEMBL SCHEMBL6500588
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
418 O6 -9.347 1.839 0.767 ETKDGv3 1
418 C24 -8.673 0.856 0.048 ETKDGv3 2
418 O7 -9.315 0.116 -0.745 ETKDGv3 3
418 C8 -7.213 0.711 0.207 ETKDGv3 4
418 O5 -6.595 1.585 0.874 ETKDGv3 5
418 N4 -6.480 -0.391 -0.373 ETKDGv3 6
418 C2 -5.096 -0.219 -0.747 ETKDGv3 7
418 C3 -4.197 -1.198 -0.530 ETKDGv3 8
418 C4 -2.777 -1.006 -0.889 ETKDGv3 9
418 C5 -2.369 0.143 -1.454 ETKDGv3 10
418 C6 -3.359 1.216 -1.714 ETKDGv3 11
418 C1 -4.643 1.046 -1.380 ETKDGv3 12
418 C7 -0.908 0.387 -1.729 ETKDGv3 13
418 C9 -0.166 0.832 -0.456 ETKDGv3 14
418 N1 -0.726 2.091 0.051 ETKDGv3 15
418 C10 -1.713 2.138 1.089 ETKDGv3 16
418 O4 -2.002 1.099 1.744 ETKDGv3 17
418 O23 -2.367 3.346 1.354 ETKDGv3 18
418 C40 -3.400 3.477 2.329 ETKDGv3 19
418 C41 -2.841 3.360 3.718 ETKDGv3 20
418 C42 -1.949 4.237 4.185 ETKDGv3 21
418 C11 1.301 1.005 -0.749 ETKDGv3 22
418 O8 1.686 1.973 -1.462 ETKDGv3 23
418 N2 2.255 0.056 -0.250 ETKDGv3 24
418 C12 3.682 0.142 -0.556 ETKDGv3 25
418 C13 3.953 -0.348 -1.984 ETKDGv3 26
418 C15 5.395 -0.085 -2.447 ETKDGv3 27
418 C14 6.435 -0.940 -1.716 ETKDGv3 28
418 O1 6.688 -0.404 -0.421 ETKDGv3 29
418 C32 7.662 -0.949 0.417 ETKDGv3 30
418 C33 7.274 -1.735 1.430 ETKDGv3 31
418 C34 8.273 -2.379 2.299 ETKDGv3 32
418 C35 9.576 -2.174 2.086 ETKDGv3 33
418 C36 10.026 -1.277 0.995 ETKDGv3 34
418 O13 11.391 -1.045 0.833 ETKDGv3 35
418 C37 9.116 -0.677 0.191 ETKDGv3 36
418 C38 9.531 0.273 -0.871 ETKDGv3 37
418 O11 10.674 0.184 -1.399 ETKDGv3 38
418 O12 8.646 1.272 -1.291 ETKDGv3 39
418 C39 8.954 2.183 -2.338 ETKDGv3 40
418 C26 -7.116 -1.670 -0.570 ETKDGv3 41
418 C27 -7.257 -2.143 -1.821 ETKDGv3 42
418 C28 -7.996 -3.393 -2.072 ETKDGv3 43
418 C29 -8.537 -4.065 -1.052 ETKDGv3 44
418 C30 -8.366 -3.579 0.330 ETKDGv3 45
418 C25 -7.672 -2.452 0.583 ETKDGv3 46
418 C31 -7.428 -2.050 1.988 ETKDGv3 47
418 O9 -6.467 -1.288 2.280 ETKDGv3 48
418 O10 -8.242 -2.538 3.008 ETKDGv3 49
418 HO6 -10.348 1.961 0.668 ETKDGv3 50
418 H3 -4.493 -2.128 -0.061 ETKDGv3 51
418 H4 -2.067 -1.793 -0.665 ETKDGv3 52
418 H6 -3.044 2.147 -2.167 ETKDGv3 53
418 H1 -5.354 1.837 -1.583 ETKDGv3 54
418 H71 -0.801 1.163 -2.519 ETKDGv3 55
418 H72 -0.446 -0.545 -2.123 ETKDGv3 56
418 H9 -0.275 0.035 0.312 ETKDGv3 57
418 HN1 -0.548 2.972 -0.483 ETKDGv3 58
418 H401 -4.175 2.698 2.165 ETKDGv3 59
418 H402 -3.884 4.470 2.211 ETKDGv3 60
418 H41 -3.173 2.547 4.356 ETKDGv3 61
418 H421 -1.601 5.061 3.568 ETKDGv3 62
418 H422 -1.560 4.132 5.192 ETKDGv3 63
418 HN2 1.933 -0.703 0.392 ETKDGv3 64
418 H121 4.031 1.189 -0.424 ETKDGv3 65
418 H122 4.235 -0.499 0.163 ETKDGv3 66
418 H131 3.272 0.181 -2.685 ETKDGv3 67
418 H132 3.723 -1.434 -2.056 ETKDGv3 68
418 H151 5.454 -0.326 -3.531 ETKDGv3 69
418 H152 5.645 0.993 -2.336 ETKDGv3 70
418 H141 6.084 -1.991 -1.629 ETKDGv3 71
418 H142 7.376 -0.940 -2.308 ETKDGv3 72
418 H33 6.222 -1.928 1.597 ETKDGv3 73
418 H34 7.949 -3.027 3.103 ETKDGv3 74
418 H35 10.305 -2.655 2.725 ETKDGv3 75
418 H13 12.077 -1.483 1.436 ETKDGv3 76
418 H391 9.852 2.780 -2.072 ETKDGv3 77
418 H392 8.096 2.870 -2.486 ETKDGv3 78
418 H393 9.137 1.628 -3.282 ETKDGv3 79
418 H27 -6.867 -1.585 -2.664 ETKDGv3 80
418 H28 -8.114 -3.755 -3.085 ETKDGv3 81
418 H29 -9.087 -4.979 -1.236 ETKDGv3 82
418 H30 -8.775 -4.175 1.136 ETKDGv3 83
418 H10 -8.078 -2.278 3.973 ETKDGv3 84
#