data_439
#
_chem_comp.id 439
_chem_comp.name
6-CHLORO-N-{(3S)-1-[(1S)-1-(DIMETHYLAMINO)-2,3-DIHYDRO-1H-INDEN-5-YL]-2-OXO-3-PYRROLIDINYL}-2-NAPHTHALENESULFONAMIDE
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H26 Cl N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-02-02
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 484.010
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 439
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2Y80
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
439 O3 O3 O 0 1 N N N N N N 8.006 6.645 21.584 -0.496 0.973 0.035 O3 439 1
439 C25 C25 C 0 1 N N N N N N 6.919 6.139 21.765 -0.223 2.148 -0.094 C25 439 2
439 N2 N2 N 0 1 N N N N N N 6.468 5.031 21.137 1.021 2.655 -0.081 N2 439 3
439 C8 C8 C 0 1 Y N N N N N 7.206 4.239 20.247 2.183 1.894 0.092 C8 439 4
439 C7 C7 C 0 1 Y N N N N N 7.235 2.865 20.460 2.091 0.540 0.385 C7 439 5
439 C9 C9 C 0 1 Y N N N N N 7.906 4.784 19.167 3.431 2.489 -0.034 C9 439 6
439 C10 C10 C 0 1 Y N N N N N 8.624 3.949 18.323 4.573 1.733 0.137 C10 439 7
439 C11 C11 C 0 1 Y N N N N N 8.645 2.563 18.537 4.480 0.383 0.434 C11 439 8
439 C6 C6 C 0 1 Y N N N N N 7.950 2.036 19.614 3.238 -0.213 0.555 C6 439 9
439 C5 C5 C 0 1 N N N N N N 8.123 0.534 19.659 3.406 -1.683 0.876 C5 439 10
439 C4 C4 C 0 1 N N N N N N 9.356 0.271 18.771 4.862 -1.826 1.367 C4 439 11
439 C3 C3 C 0 1 N N R N N N 9.343 1.444 17.768 5.566 -0.646 0.664 C3 439 12
439 N1 N1 N 0 1 N N N N N N 8.785 1.127 16.431 6.132 -1.086 -0.618 N1 439 13
439 C2 C2 C 0 1 N N N N N N 9.143 2.228 15.520 6.619 0.059 -1.400 C2 439 14
439 C1 C1 C 0 1 N N N N N N 7.306 1.041 16.452 7.199 -2.074 -0.412 C1 439 15
439 C14 C14 C 0 1 N N S N N N 5.875 6.612 22.752 -1.234 3.254 -0.298 C14 439 16
439 C13 C13 C 0 1 N N N N N N 4.587 5.932 22.238 -0.448 4.549 0.015 C13 439 17
439 C12 C12 C 0 1 N N N N N N 5.096 4.670 21.523 1.006 4.110 -0.272 C12 439 18
439 N3 N3 N 0 1 N N N N N N 5.772 8.070 22.780 -2.358 3.100 0.629 N3 439 19
439 S1 S1 S 0 1 N N N N N N 6.198 8.976 24.046 -3.745 2.343 0.130 S1 439 20
439 O1 O1 O 0 1 N N N N N N 6.036 10.277 23.507 -4.616 2.323 1.253 O1 439 21
439 O2 O2 O 0 1 N N N N N N 5.483 8.568 25.205 -4.096 2.930 -1.115 O2 439 22
439 C15 C15 C 0 1 Y N N N N N 7.918 8.701 24.374 -3.330 0.665 -0.209 C15 439 23
439 C24 C24 C 0 1 Y N N N N N 8.294 8.060 25.527 -3.419 -0.262 0.785 C24 439 24
439 C23 C23 C 0 1 Y N N N N N 9.671 7.826 25.784 -3.090 -1.601 0.518 C23 439 25
439 C18 C18 C 0 1 Y N N N N N 10.625 8.265 24.818 -2.669 -1.967 -0.785 C18 439 26
439 C17 C17 C 0 1 Y N N N N N 10.195 8.906 23.637 -2.590 -0.983 -1.785 C17 439 27
439 C16 C16 C 0 1 Y N N N N N 8.861 9.126 23.432 -2.922 0.304 -1.491 C16 439 28
439 C22 C22 C 0 1 Y N N N N N 10.115 7.177 26.959 -3.169 -2.585 1.518 C22 439 29
439 C21 C21 C 0 1 Y N N N N N 11.456 6.971 27.153 -2.842 -3.873 1.224 C21 439 30
439 C20 C20 C 0 1 Y N N N N N 12.377 7.402 26.203 -2.428 -4.233 -0.058 C20 439 31
439 CL1 CL1 CL 0 0 N N N N N N 14.084 7.140 26.437 -2.019 -5.887 -0.392 CL1 439 32
439 C19 C19 C 0 1 Y N N N N N 11.992 8.028 25.057 -2.340 -3.306 -1.053 C19 439 33
439 H14 H14 H 0 1 N N N N N N 6.106 6.348 23.795 -1.587 3.263 -1.329 H14 439 34
439 H121 H121 H 0 0 N N N N N N 4.480 4.426 20.645 1.691 4.590 0.427 H121 439 35
439 H122 H122 H 0 0 N N N N N N 5.052 3.772 22.156 1.277 4.359 -1.298 H122 439 36
439 H7 H7 H 0 1 N N N N N N 6.694 2.441 21.293 1.121 0.075 0.480 H7 439 37
439 H9 H9 H 0 1 N N N N N N 7.888 5.849 18.990 3.508 3.541 -0.266 H9 439 38
439 H10 H10 H 0 1 N N N N N N 9.172 4.370 17.493 5.543 2.197 0.038 H10 439 39
439 H3 H3 H 0 1 N N N N N N 10.356 1.740 17.458 6.348 -0.234 1.302 H3 439 40
439 H51C H51C H 0 0 N N N N N N 8.289 0.182 20.688 2.711 -1.981 1.661 H51C 439 41
439 H52C H52C H 0 0 N N N N N N 7.230 -0.002 19.307 3.248 -2.286 -0.019 H52C 439 42
439 H41C H41C H 0 0 N N N N N N 10.283 0.259 19.364 4.918 -1.721 2.450 H41C 439 43
439 H42C H42C H 0 0 N N N N N N 9.319 -0.710 18.275 5.288 -2.777 1.047 H42C 439 44
439 H21C H21C H 0 0 N N N N N N 9.232 3.163 16.092 7.393 0.580 -0.837 H21C 439 45
439 H22C H22C H 0 0 N N N N N N 10.103 2.003 15.033 7.032 -0.295 -2.344 H22C 439 46
439 H23C H23C H 0 0 N N N N N N 8.361 2.340 14.755 5.792 0.741 -1.598 H23C 439 47
439 H11C H11C H 0 0 N N N N N N 6.954 1.020 17.494 6.774 -2.984 0.012 H11C 439 48
439 H12C H12C H 0 0 N N N N N N 6.881 1.916 15.939 7.671 -2.304 -1.367 H12C 439 49
439 H13C H13C H 0 0 N N N N N N 6.985 0.123 15.938 7.943 -1.668 0.274 H13C 439 50
439 H131 H131 H 0 0 N N N N N N 3.910 5.678 23.067 -0.749 5.358 -0.650 H131 439 51
439 H132 H132 H 0 0 N N N N N N 4.001 6.585 21.575 -0.572 4.837 1.059 H132 439 52
439 HA HA H 0 1 N N N N N N 6.354 8.384 22.030 -2.290 3.440 1.535 HA 439 53
439 H24 H24 H 0 1 N N N N N N 7.547 7.735 26.236 -3.741 0.032 1.773 H24 439 54
439 H16 H16 H 0 1 N N N N N N 8.533 9.632 22.536 -2.864 1.058 -2.262 H16 439 55
439 H22 H22 H 0 1 N N N N N N 9.402 6.846 27.699 -3.488 -2.321 2.516 H22 439 56
439 H17 H17 H 0 1 N N N N N N 10.916 9.222 22.898 -2.271 -1.247 -2.783 H17 439 57
439 H19 H19 H 0 1 N N N N N N 12.732 8.341 24.335 -2.018 -3.600 -2.041 H19 439 58
439 H21 H21 H 0 1 N N N N N N 11.799 6.472 28.047 -2.904 -4.627 1.995 H21 439 59
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
439 O3 C25 DOUB N N 1
439 C25 N2 SING N N 2
439 C25 C14 SING N N 3
439 N2 C8 SING N N 4
439 N2 C12 SING N N 5
439 C8 C7 SING Y N 6
439 C8 C9 DOUB Y N 7
439 C7 C6 DOUB Y N 8
439 C9 C10 SING Y N 9
439 C10 C11 DOUB Y N 10
439 C11 C6 SING Y N 11
439 C11 C3 SING N N 12
439 C6 C5 SING N N 13
439 C5 C4 SING N N 14
439 C4 C3 SING N N 15
439 C3 N1 SING N N 16
439 N1 C2 SING N N 17
439 N1 C1 SING N N 18
439 C14 C13 SING N N 19
439 C14 N3 SING N N 20
439 C13 C12 SING N N 21
439 N3 S1 SING N N 22
439 S1 O1 DOUB N N 23
439 S1 O2 DOUB N N 24
439 S1 C15 SING N N 25
439 C15 C24 SING Y N 26
439 C15 C16 DOUB Y N 27
439 C24 C23 DOUB Y N 28
439 C23 C18 SING Y N 29
439 C23 C22 SING Y N 30
439 C18 C17 DOUB Y N 31
439 C18 C19 SING Y N 32
439 C17 C16 SING Y N 33
439 C22 C21 DOUB Y N 34
439 C21 C20 SING Y N 35
439 C20 CL1 SING N N 36
439 C20 C19 DOUB Y N 37
439 C14 H14 SING N N 38
439 C12 H121 SING N N 39
439 C12 H122 SING N N 40
439 C7 H7 SING N N 41
439 C9 H9 SING N N 42
439 C10 H10 SING N N 43
439 C3 H3 SING N N 44
439 C5 H51C SING N N 45
439 C5 H52C SING N N 46
439 C4 H41C SING N N 47
439 C4 H42C SING N N 48
439 C2 H21C SING N N 49
439 C2 H22C SING N N 50
439 C2 H23C SING N N 51
439 C1 H11C SING N N 52
439 C1 H12C SING N N 53
439 C1 H13C SING N N 54
439 C13 H131 SING N N 55
439 C13 H132 SING N N 56
439 N3 HA SING N N 57
439 C24 H24 SING N N 58
439 C16 H16 SING N N 59
439 C22 H22 SING N N 60
439 C17 H17 SING N N 61
439 C19 H19 SING N N 62
439 C21 H21 SING N N 63
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
439 SMILES_CANONICAL CACTVS 3.352 CN(C)[C@@H]1CCc2cc(ccc12)N3CC[C@H](N[S](=O)(=O)c4ccc5cc(Cl)ccc5c4)C3=O
439 SMILES CACTVS 3.352 CN(C)[CH]1CCc2cc(ccc12)N3CC[CH](N[S](=O)(=O)c4ccc5cc(Cl)ccc5c4)C3=O
439 SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 CN(C)[C@@H]1CCc2c1ccc(c2)N3CC[C@@H](C3=O)NS(=O)(=O)c4ccc5cc(ccc5c4)Cl
439 SMILES "OpenEye OEToolkits" 1.6.1 CN(C)C1CCc2c1ccc(c2)N3CCC(C3=O)NS(=O)(=O)c4ccc5cc(ccc5c4)Cl
439 InChI InChI 1.03 InChI=1S/C25H26ClN3O3S/c1-28(2)24-10-5-18-14-20(7-9-22(18)24)29-12-11-23(25(29)30)27-33(31,32)21-8-4-16-13-19(26)6-3-17(16)15-21/h3-4,6-9,13-15,23-24,27H,5,10-12H2,1-2H3/t23-,24+/m0/s1
439 InChIKey InChI 1.03 DBFTVRMJVISJEX-BJKOFHAPSA-N
#
_pdbx_chem_comp_identifier.comp_id 439
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 1.6.1
_pdbx_chem_comp_identifier.identifier
6-chloro-N-[(3S)-1-[(1R)-1-dimethylamino-2,3-dihydro-1H-inden-5-yl]-2-oxo-pyrrolidin-3-yl]naphthalene-2-sulfonamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
439 'Create component' 2011-02-02 EBI
439 'Modify aromatic_flag' 2011-06-04 RCSB
439 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
439 O3 O 12.122 -2.430 1
439 C25 C 12.434 -0.963 2
439 N2 N 11.430 0.152 3
439 C8 C 9.938 -0.005 4
439 C7 C 9.057 1.209 5
439 C9 C 9.328 -1.375 6
439 C10 C 7.837 -1.532 7
439 C11 C 6.955 -0.319 8
439 C6 C 7.565 1.052 9
439 C5 C 6.454 2.047 10
439 C4 C 5.164 1.300 11
439 C3 C 5.472 -0.159 12
439 N1 N 4.467 -1.272 13
439 C2 C 3.000 -0.957 14
439 C1 C 4.928 -2.699 15
439 C14 C 13.804 -0.353 16
439 C13 C 13.647 1.139 17
439 C12 C 12.180 1.451 18
439 N3 N 15.103 -1.103 19
439 S1 S 16.402 -0.353 20
439 O1 O 15.652 0.946 21
439 O2 O 17.152 -1.652 22
439 C15 C 17.701 0.397 23
439 C24 C 19.000 -0.353 24
439 C23 C 20.299 0.397 25
439 C18 C 20.299 1.897 26
439 C17 C 19.000 2.647 27
439 C16 C 17.701 1.897 28
439 C22 C 21.640 -0.405 29
439 C21 C 22.999 0.366 30
439 C20 C 22.999 1.928 31
439 CL1 Cl 24.296 2.683 32
439 C19 C 21.640 2.699 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
439 O3 C25 DOUBLE NONE 1
439 C25 N2 SINGLE NONE 2
439 C25 C14 SINGLE NONE 3
439 N2 C8 SINGLE NONE 4
439 N2 C12 SINGLE NONE 5
439 C8 C7 DOUBLE NONE 6
439 C8 C9 SINGLE NONE 7
439 C7 C6 SINGLE NONE 8
439 C9 C10 DOUBLE NONE 9
439 C10 C11 SINGLE NONE 10
439 C11 C6 DOUBLE NONE 11
439 C11 C3 SINGLE NONE 12
439 C6 C5 SINGLE NONE 13
439 C5 C4 SINGLE NONE 14
439 C4 C3 SINGLE NONE 15
439 C3 N1 SINGLE BEGINDASH 16
439 N1 C2 SINGLE NONE 17
439 N1 C1 SINGLE NONE 18
439 C14 C13 SINGLE NONE 19
439 C14 N3 SINGLE BEGINDASH 20
439 C13 C12 SINGLE NONE 21
439 N3 S1 SINGLE NONE 22
439 S1 O1 DOUBLE NONE 23
439 S1 O2 DOUBLE NONE 24
439 S1 C15 SINGLE NONE 25
439 C15 C24 DOUBLE NONE 26
439 C15 C16 SINGLE NONE 27
439 C24 C23 SINGLE NONE 28
439 C23 C18 DOUBLE NONE 29
439 C23 C22 SINGLE NONE 30
439 C18 C17 SINGLE NONE 31
439 C18 C19 SINGLE NONE 32
439 C17 C16 DOUBLE NONE 33
439 C22 C21 DOUBLE NONE 34
439 C21 C20 SINGLE NONE 35
439 C20 CL1 SINGLE NONE 36
439 C20 C19 DOUBLE NONE 37
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
439 MurckoScaffold S1 scaffold 'O=C1[C@@H](NS(=O)(=O)c2ccc3ccccc3c2)CCN1c1ccc2c(c1)CCC2' InChI=1S/C23H22N2O3S/c26-23-22(12-13-25(23)20-10-8-17-6-3-7-18(17)14-20)24-29(27,28)21-11-9-16-4-1-2-5-19(16)15-21/h1-2,4-5,8-11,14-15,22,24H,3,6-7,12-13H2/t22-/m0/s1 ZEJOROMODXFMLP-QFIPXVFZSA-N
439 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
439 napthalene F2 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
439 peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
439 phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
439 Z431570984 F5 fragment CNCCNS(C)(=O)=O.Cl 'InChI=1S/C4H12N2O2S.ClH/c1-5-3-4-6-9(2,7)8;/h5-6H,3-4H2,1-2H3;1H' KOWKLRCTVDADQT-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
439 O3 S1 1
439 C25 S1 1
439 N2 S1 1
439 C8 S1 1
439 C7 S1 1
439 C9 S1 1
439 C10 S1 1
439 C11 S1 1
439 C6 S1 1
439 C5 S1 1
439 C4 S1 1
439 C3 S1 1
439 C14 S1 1
439 C13 S1 1
439 C12 S1 1
439 N3 S1 1
439 S1 S1 1
439 O1 S1 1
439 O2 S1 1
439 C15 S1 1
439 C24 S1 1
439 C23 S1 1
439 C18 S1 1
439 C17 S1 1
439 C16 S1 1
439 C22 S1 1
439 C21 S1 1
439 C20 S1 1
439 C19 S1 1
439 N2 F1 1
439 C25 F1 1
439 O3 F1 1
439 C14 F1 1
439 C15 F2 1
439 C16 F2 1
439 C17 F2 1
439 C18 F2 1
439 C23 F2 1
439 C24 F2 1
439 C22 F2 1
439 C21 F2 1
439 C20 F2 1
439 C19 F2 1
439 O3 F3 1
439 C25 F3 1
439 C14 F3 1
439 N3 F3 1
439 C8 F4 1
439 C7 F4 1
439 C6 F4 1
439 C11 F4 1
439 C10 F4 1
439 C9 F4 1
439 C15 F4 2
439 C24 F4 2
439 C23 F4 2
439 C18 F4 2
439 C17 F4 2
439 C16 F4 2
439 C23 F4 3
439 C18 F4 3
439 C19 F4 3
439 C20 F4 3
439 C21 F4 3
439 C22 F4 3
439 CL1 F5 1
439 C8 F5 1
439 N2 F5 1
439 C25 F5 1
439 C14 F5 1
439 N3 F5 1
439 S1 F5 1
439 O1 F5 1
439 O2 F5 1
439 C15 F5 1
439 CL1 F5 2
439 C12 F5 2
439 N2 F5 2
439 C25 F5 2
439 C14 F5 2
439 N3 F5 2
439 S1 F5 2
439 O1 F5 2
439 O2 F5 2
439 C15 F5 2
#
_pdbe_chem_comp_rdkit_properties.comp_id 439
_pdbe_chem_comp_rdkit_properties.exactmw 483.138
_pdbe_chem_comp_rdkit_properties.amw 484.021
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 59
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.320
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 235.325
_pdbe_chem_comp_rdkit_properties.tpsa 69.720
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.099
_pdbe_chem_comp_rdkit_properties.CrippenMR 128.236
_pdbe_chem_comp_rdkit_properties.chi0v 17.425
_pdbe_chem_comp_rdkit_properties.chi1v 10.496
_pdbe_chem_comp_rdkit_properties.chi2v 5.604
_pdbe_chem_comp_rdkit_properties.chi3v 5.604
_pdbe_chem_comp_rdkit_properties.chi4v 3.808
_pdbe_chem_comp_rdkit_properties.chi0n 41.853
_pdbe_chem_comp_rdkit_properties.chi1n 21.626
_pdbe_chem_comp_rdkit_properties.chi2n 4.272
_pdbe_chem_comp_rdkit_properties.chi3n 4.272
_pdbe_chem_comp_rdkit_properties.chi4n 2.799
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.450
_pdbe_chem_comp_rdkit_properties.kappa1 7.276
_pdbe_chem_comp_rdkit_properties.kappa2 8.399
_pdbe_chem_comp_rdkit_properties.kappa3 4.146
_pdbe_chem_comp_rdkit_properties.Phi 1.852
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
439 UniChem ChEMBL CHEMBL1614790
439 UniChem PDBe 439
439 UniChem ZINC ZINC000035834638
439 UniChem PubChem 50919255
439 UniChem BindingDb 50338690
439 UniChem BRENDA 85672
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
439 O3 0.373 2.291 2.159 ETKDGv3 1
439 C25 -0.279 1.452 1.480 ETKDGv3 2
439 N2 0.326 0.369 0.794 ETKDGv3 3
439 C8 1.742 0.168 0.610 ETKDGv3 4
439 C7 2.251 -1.077 0.520 ETKDGv3 5
439 C9 2.661 1.337 0.476 ETKDGv3 6
439 C10 3.980 1.157 0.306 ETKDGv3 7
439 C11 4.521 -0.219 0.242 ETKDGv3 8
439 C6 3.703 -1.255 0.329 ETKDGv3 9
439 C5 4.408 -2.552 0.224 ETKDGv3 10
439 C4 5.791 -2.139 -0.285 ETKDGv3 11
439 C3 5.954 -0.651 0.129 ETKDGv3 12
439 N1 6.721 0.218 -0.814 ETKDGv3 13
439 C2 7.735 -0.503 -1.611 ETKDGv3 14
439 C1 7.409 1.292 -0.067 ETKDGv3 15
439 C14 -1.755 1.445 1.398 ETKDGv3 16
439 C13 -2.046 0.223 0.493 ETKDGv3 17
439 C12 -0.710 -0.509 0.273 ETKDGv3 18
439 N3 -2.225 2.719 0.832 ETKDGv3 19
439 S1 -3.908 2.984 1.183 ETKDGv3 20
439 O1 -4.111 3.033 2.673 ETKDGv3 21
439 O2 -4.326 4.307 0.607 ETKDGv3 22
439 C15 -4.908 1.719 0.474 ETKDGv3 23
439 C24 -5.418 0.737 1.235 ETKDGv3 24
439 C23 -6.221 -0.342 0.617 ETKDGv3 25
439 C18 -6.441 -0.338 -0.717 ETKDGv3 26
439 C17 -5.878 0.747 -1.551 ETKDGv3 27
439 C16 -5.153 1.720 -0.986 ETKDGv3 28
439 C22 -6.779 -1.431 1.451 ETKDGv3 29
439 C21 -7.500 -2.408 0.885 ETKDGv3 30
439 C20 -7.742 -2.403 -0.574 ETKDGv3 31
439 CL1 -8.687 -3.688 -1.303 ETKDGv3 32
439 C19 -7.240 -1.421 -1.335 ETKDGv3 33
439 H14 -2.159 1.280 2.422 ETKDGv3 34
439 H121 -0.541 -0.706 -0.808 ETKDGv3 35
439 H122 -0.708 -1.468 0.836 ETKDGv3 36
439 H7 1.619 -1.951 0.605 ETKDGv3 37
439 H9 2.267 2.345 0.479 ETKDGv3 38
439 H10 4.616 2.019 0.179 ETKDGv3 39
439 H3 6.404 -0.638 1.150 ETKDGv3 40
439 H51C 3.895 -3.232 -0.490 ETKDGv3 41
439 H52C 4.481 -3.022 1.228 ETKDGv3 42
439 H41C 6.590 -2.776 0.152 ETKDGv3 43
439 H42C 5.777 -2.262 -1.388 ETKDGv3 44
439 H21C 7.251 -1.053 -2.443 ETKDGv3 45
439 H22C 8.437 0.207 -2.102 ETKDGv3 46
439 H23C 8.327 -1.201 -0.978 ETKDGv3 47
439 H11C 6.746 1.765 0.684 ETKDGv3 48
439 H12C 8.297 0.898 0.478 ETKDGv3 49
439 H13C 7.737 2.088 -0.769 ETKDGv3 50
439 H131 -2.462 0.527 -0.492 ETKDGv3 51
439 H132 -2.778 -0.455 0.983 ETKDGv3 52
439 HA -2.095 2.737 -0.206 ETKDGv3 53
439 H24 -5.232 0.715 2.301 ETKDGv3 54
439 H16 -4.738 2.506 -1.603 ETKDGv3 55
439 H22 -6.606 -1.442 2.519 ETKDGv3 56
439 H17 -6.048 0.755 -2.620 ETKDGv3 57
439 H19 -7.416 -1.418 -2.404 ETKDGv3 58
439 H21 -7.906 -3.203 1.497 ETKDGv3 59
#