data_443
#
_chem_comp.id 443
_chem_comp.name
1-(1-{(2S)-3-[(6-chloronaphthalen-2-yl)sulfonyl]-2-hydroxypropanoyl}piperidin-4-yl)tetrahydropyrimidin-2(1H)-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H26 Cl N3 O5 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2009-11-10
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 479.977
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 443
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3KL6
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
443 C4 C4 C 0 1 N N N N N N 1.843 -9.150 -16.529 0.392 -1.916 0.312 C4 443 1
443 C8 C8 C 0 1 Y N N N N N 4.435 -8.065 -16.369 2.997 -1.242 -0.553 C8 443 2
443 C10 C10 C 0 1 Y N N N N N 6.108 -7.576 -14.723 5.100 -1.172 0.595 C10 443 3
443 C13 C13 C 0 1 Y N N N N N 6.390 -3.908 -14.398 6.482 2.226 0.252 C13 443 4
443 C15 C15 C 0 1 Y N N N N N 5.438 -3.490 -15.352 5.492 2.839 -0.516 C15 443 5
443 C17 C17 C 0 1 Y N N N N N 4.924 -5.780 -15.878 4.242 0.800 -0.550 C17 443 6
443 C22 C22 C 0 1 N N N N N N -1.473 -10.562 -13.187 -3.414 -0.808 2.219 C22 443 7
443 C24 C24 C 0 1 N N N N N N -0.647 -10.916 -10.859 -4.135 1.076 0.746 C24 443 8
443 C26 C26 C 0 1 N N N N N N 0.945 -11.194 -12.773 -1.947 -0.045 0.306 C26 443 9
443 C28 C28 C 0 1 N N N N N N 0.002 -9.458 -8.866 -5.573 3.136 0.463 C28 443 10
443 O1 O1 O 0 1 N N N N N N 2.478 -9.086 -14.174 -0.631 -4.083 -0.006 O1 443 11
443 C2 C2 C 0 1 N N S N N N 1.762 -9.846 -15.170 -0.899 -2.679 0.006 C2 443 12
443 S5 S5 S 0 1 N N N N N N 3.491 -9.242 -17.264 1.577 -2.167 -1.037 S5 443 13
443 O6 O6 O 0 1 N N N N N N 4.090 -10.514 -16.992 2.029 -3.514 -1.061 O6 443 14
443 O7 O7 O 0 1 N N N N N N 3.389 -8.744 -18.594 1.128 -1.524 -2.222 O7 443 15
443 C9 C9 C 0 1 Y N N N N N 5.391 -8.482 -15.434 3.992 -1.858 0.205 C9 443 16
443 C11 C11 C 0 1 Y N N N N N 5.893 -6.202 -14.926 5.248 0.177 0.230 C11 443 17
443 C12 C12 C 0 1 Y N N N N N 6.614 -5.241 -14.201 6.373 0.920 0.624 C12 443 18
443 CL14 CL14 CL 0 0 N N N N N N 7.287 -2.742 -13.471 7.874 3.142 0.740 CL14 443 19
443 C16 C16 C 0 1 Y N N N N N 4.717 -4.397 -16.077 4.389 2.149 -0.915 C16 443 20
443 C18 C18 C 0 1 Y N N N N N 4.201 -6.742 -16.603 3.108 0.061 -0.930 C18 443 21
443 C19 C19 C 0 1 N N N N N N 0.304 -9.903 -14.767 -1.926 -2.373 1.065 C19 443 22
443 O20 O20 O 0 1 N N N N N N -0.535 -9.367 -15.473 -2.318 -3.252 1.803 O20 443 23
443 N21 N21 N 0 1 N N N N N N -0.059 -10.520 -13.618 -2.411 -1.122 1.191 N21 443 24
443 C23 C23 C 0 1 N N N N N N -1.550 -10.032 -11.737 -4.615 -0.136 1.546 C23 443 25
443 C25 C25 C 0 1 N N N N N N 0.812 -10.762 -11.310 -3.165 0.617 -0.346 C25 443 26
443 N27 N27 N 0 1 N N N N N N -0.719 -10.622 -9.415 -5.285 1.740 0.128 N27 443 27
443 C29 C29 C 0 1 N N N N N N -0.643 -8.947 -7.573 -7.080 3.383 0.335 C29 443 28
443 C30 C30 C 0 1 N N N N N N -0.838 -10.106 -6.588 -7.522 2.984 -1.077 C30 443 29
443 N31 N31 N 0 1 N N N N N N -1.489 -11.233 -7.258 -7.128 1.596 -1.329 N31 443 30
443 C32 C32 C 0 1 N N N N N N -1.406 -11.438 -8.586 -6.054 1.057 -0.734 C32 443 31
443 O33 O33 O 0 1 N N N N N N -1.981 -12.401 -9.053 -5.764 -0.097 -0.986 O33 443 32
443 H4 H4 H 0 1 N N N N N N 1.583 -8.090 -16.392 0.171 -0.853 0.410 H4 443 33
443 H4A H4A H 0 1 N N N N N N 1.131 -9.637 -17.211 0.819 -2.285 1.245 H4A 443 34
443 H10 H10 H 0 1 N N N N N N 6.841 -7.909 -14.004 5.863 -1.662 1.182 H10 443 35
443 H15 H15 H 0 1 N N N N N N 5.276 -2.434 -15.512 5.603 3.875 -0.798 H15 443 36
443 H22 H22 H 0 1 N N N N N N -2.085 -9.932 -13.849 -3.735 -1.727 2.708 H22 443 37
443 H22A H22A H 0 0 N N N N N N -1.847 -11.596 -13.229 -2.983 -0.131 2.957 H22A 443 38
443 H24 H24 H 0 1 N N N N N N -1.017 -11.943 -10.993 -3.628 1.774 1.412 H24 443 39
443 H26 H26 H 0 1 N N N N N N 0.795 -12.282 -12.839 -1.395 0.694 0.886 H26 443 40
443 H26A H26A H 0 0 N N N N N N 1.950 -10.930 -13.133 -1.299 -0.460 -0.468 H26A 443 41
443 H28 H28 H 0 1 N N N N N N 1.039 -9.755 -8.649 -5.256 3.337 1.486 H28 443 42
443 H28A H28A H 0 0 N N N N N N -0.014 -8.649 -9.612 -5.036 3.794 -0.221 H28A 443 43
443 HO1 HO1 H 0 1 N N N N N N 2.420 -9.528 -13.335 -0.289 -4.425 0.831 HO1 443 44
443 H2 H2 H 0 1 N N N N N N 2.203 -10.851 -15.242 -1.279 -2.373 -0.969 H2 443 45
443 H9 H9 H 0 1 N N N N N N 5.559 -9.537 -15.277 3.881 -2.894 0.487 H9 443 46
443 H12 H12 H 0 1 N N N N N N 7.353 -5.558 -13.480 7.148 0.459 1.218 H12 443 47
443 H16 H16 H 0 1 N N N N N N 3.991 -4.057 -16.800 3.630 2.636 -1.510 H16 443 48
443 H18 H18 H 0 1 N N N N N N 3.469 -6.438 -17.336 2.329 0.525 -1.517 H18 443 49
443 H23 H23 H 0 1 N N N N N N -1.205 -8.988 -11.700 -5.100 -0.846 0.876 H23 443 50
443 H23A H23A H 0 0 N N N N N N -2.588 -10.078 -11.375 -5.324 0.189 2.308 H23A 443 51
443 H25 H25 H 0 1 N N N N N N 1.117 -9.710 -11.210 -3.664 -0.099 -0.998 H25 443 52
443 H25A H25A H 0 0 N N N N N N 1.458 -11.393 -10.682 -2.841 1.478 -0.930 H25A 443 53
443 H29 H29 H 0 1 N N N N N N 0.010 -8.189 -7.117 -7.614 2.781 1.070 H29 443 54
443 H29A H29A H 0 0 N N N N N N -1.621 -8.501 -7.807 -7.292 4.440 0.500 H29A 443 55
443 H30 H30 H 0 1 N N N N N N 0.143 -10.428 -6.208 -8.604 3.076 -1.160 H30 443 56
443 H30A H30A H 0 0 N N N N N N -1.468 -9.769 -5.751 -7.043 3.637 -1.807 H30A 443 57
443 HN31 HN31 H 0 0 N N N N N N -2.018 -11.878 -6.706 -7.655 1.056 -1.938 HN31 443 58
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
443 S5 C4 SING N N 1
443 C4 C2 SING N N 2
443 C4 H4 SING N N 3
443 C4 H4A SING N N 4
443 S5 C8 SING N N 5
443 C18 C8 DOUB Y N 6
443 C8 C9 SING Y N 7
443 C9 C10 DOUB Y N 8
443 C11 C10 SING Y N 9
443 C10 H10 SING N N 10
443 C15 C13 DOUB Y N 11
443 C13 C12 SING Y N 12
443 C13 CL14 SING N N 13
443 C16 C15 SING Y N 14
443 C15 H15 SING N N 15
443 C18 C17 SING Y N 16
443 C16 C17 DOUB Y N 17
443 C17 C11 SING Y N 18
443 N21 C22 SING N N 19
443 C22 C23 SING N N 20
443 C22 H22 SING N N 21
443 C22 H22A SING N N 22
443 C23 C24 SING N N 23
443 C25 C24 SING N N 24
443 C24 N27 SING N N 25
443 C24 H24 SING N N 26
443 N21 C26 SING N N 27
443 C26 C25 SING N N 28
443 C26 H26 SING N N 29
443 C26 H26A SING N N 30
443 N27 C28 SING N N 31
443 C28 C29 SING N N 32
443 C28 H28 SING N N 33
443 C28 H28A SING N N 34
443 C2 O1 SING N N 35
443 O1 HO1 SING N N 36
443 C2 C19 SING N N 37
443 C2 H2 SING N N 38
443 O7 S5 DOUB N N 39
443 S5 O6 DOUB N N 40
443 C9 H9 SING N N 41
443 C11 C12 DOUB Y N 42
443 C12 H12 SING N N 43
443 C16 H16 SING N N 44
443 C18 H18 SING N N 45
443 O20 C19 DOUB N N 46
443 C19 N21 SING N N 47
443 C23 H23 SING N N 48
443 C23 H23A SING N N 49
443 C25 H25 SING N N 50
443 C25 H25A SING N N 51
443 N27 C32 SING N N 52
443 C29 C30 SING N N 53
443 C29 H29 SING N N 54
443 C29 H29A SING N N 55
443 N31 C30 SING N N 56
443 C30 H30 SING N N 57
443 C30 H30A SING N N 58
443 C32 N31 SING N N 59
443 N31 HN31 SING N N 60
443 O33 C32 DOUB N N 61
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
443 SMILES_CANONICAL CACTVS 3.352 O[C@H](C[S](=O)(=O)c1ccc2cc(Cl)ccc2c1)C(=O)N3CC[C@@H](CC3)N4CCCNC4=O
443 SMILES CACTVS 3.352 O[CH](C[S](=O)(=O)c1ccc2cc(Cl)ccc2c1)C(=O)N3CC[CH](CC3)N4CCCNC4=O
443 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 c1cc(cc2c1cc(cc2)Cl)S(=O)(=O)C[C@H](C(=O)N3CCC(CC3)N4CCCNC4=O)O
443 SMILES "OpenEye OEToolkits" 1.7.0 c1cc(cc2c1cc(cc2)Cl)S(=O)(=O)CC(C(=O)N3CCC(CC3)N4CCCNC4=O)O
443 InChI InChI 1.03 InChI=1S/C22H26ClN3O5S/c23-17-4-2-16-13-19(5-3-15(16)12-17)32(30,31)14-20(27)21(28)25-10-6-18(7-11-25)26-9-1-8-24-22(26)29/h2-5,12-13,18,20,27H,1,6-11,14H2,(H,24,29)/t20-/m1/s1
443 InChIKey InChI 1.03 GEHAEMCVKDPMKO-HXUWFJFHSA-N
#
_pdbx_chem_comp_identifier.comp_id 443
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 1.6.1
_pdbx_chem_comp_identifier.identifier
1-[1-[(2S)-3-(6-chloronaphthalen-2-yl)sulfonyl-2-hydroxy-propanoyl]piperidin-4-yl]-1,3-diazinan-2-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
443 'Create component' 2009-11-10 RCSB
443 'Modify aromatic_flag' 2011-06-04 RCSB
443 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id 443
_pdbe_chem_comp_drugbank_details.drugbank_id DB11984
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Letaxaban
_pdbe_chem_comp_drugbank_details.description
'Letaxaban has been used in trials studying the treatment and prevention of Venous Thromboembolism and Acute Coronary Syndrome.'
_pdbe_chem_comp_drugbank_details.cas_number 870262-90-1
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
443 Letaxaban DrugBank ?
443 Letaxabanum DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id 443
_pdbe_chem_comp_drugbank_classification.drugbank_id DB11984
_pdbe_chem_comp_drugbank_classification.parent Chloronaphthalenes
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Naphthalenes
_pdbe_chem_comp_drugbank_classification.superclass Benzenoids
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as chloronaphthalenes. These are aromatic heterocyclic compounds containing a naphthalene moiety substituted at one or more positions by a chlorine atom.'
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
443 C4 C 13.392 -2.340 1
443 C8 C 15.990 -0.840 2
443 C10 C 17.290 1.410 3
443 C13 C 21.288 0.691 4
443 C15 C 21.288 -0.871 5
443 C17 C 18.588 -0.840 6
443 C22 C 9.495 -0.090 7
443 C24 C 6.897 -0.090 8
443 C26 C 8.196 -2.340 9
443 C28 C 4.299 -0.090 10
443 O1 O 12.093 -0.090 11
443 C2 C 12.093 -1.590 12
443 S5 S 14.691 -1.590 13
443 O6 O 15.441 -2.889 14
443 O7 O 13.941 -0.291 15
443 C9 C 15.990 0.660 16
443 C11 C 18.588 0.660 17
443 C12 C 19.929 1.462 18
443 CL14 Cl 22.585 1.446 19
443 C16 C 19.929 -1.642 20
443 C18 C 17.290 -1.590 21
443 C19 C 10.794 -2.340 22
443 O20 O 10.794 -3.840 23
443 N21 N 9.495 -1.590 24
443 C23 C 8.196 0.660 25
443 C25 C 6.897 -1.590 26
443 N27 N 5.598 0.660 27
443 C29 C 3.000 0.660 28
443 C30 C 3.000 2.160 29
443 N31 N 4.299 2.910 30
443 C32 C 5.598 2.160 31
443 O33 O 6.897 2.910 32
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
443 S5 C4 SINGLE NONE 1
443 C4 C2 SINGLE NONE 2
443 S5 C8 SINGLE NONE 3
443 C18 C8 DOUBLE NONE 4
443 C8 C9 SINGLE NONE 5
443 C9 C10 DOUBLE NONE 6
443 C11 C10 SINGLE NONE 7
443 C15 C13 SINGLE NONE 8
443 C13 C12 DOUBLE NONE 9
443 C13 CL14 SINGLE NONE 10
443 C16 C15 DOUBLE NONE 11
443 C18 C17 SINGLE NONE 12
443 C16 C17 SINGLE NONE 13
443 C17 C11 DOUBLE NONE 14
443 N21 C22 SINGLE NONE 15
443 C22 C23 SINGLE NONE 16
443 C23 C24 SINGLE NONE 17
443 C25 C24 SINGLE NONE 18
443 C24 N27 SINGLE NONE 19
443 N21 C26 SINGLE NONE 20
443 C26 C25 SINGLE NONE 21
443 N27 C28 SINGLE NONE 22
443 C28 C29 SINGLE NONE 23
443 C2 O1 SINGLE BEGINDASH 24
443 C2 C19 SINGLE NONE 25
443 O7 S5 DOUBLE NONE 26
443 S5 O6 DOUBLE NONE 27
443 C11 C12 SINGLE NONE 28
443 O20 C19 DOUBLE NONE 29
443 C19 N21 SINGLE NONE 30
443 N27 C32 SINGLE NONE 31
443 C29 C30 SINGLE NONE 32
443 N31 C30 SINGLE NONE 33
443 C32 N31 SINGLE NONE 34
443 O33 C32 DOUBLE NONE 35
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
443 MurckoScaffold S1 scaffold O=C(CCS(=O)(=O)c1ccc2ccccc2c1)N1CCC(N2CCCNC2=O)CC1 InChI=1S/C22H27N3O4S/c26-21(24-13-8-19(9-14-24)25-12-3-11-23-22(25)27)10-15-30(28,29)20-7-6-17-4-1-2-5-18(17)16-20/h1-2,4-7,16,19H,3,8-15H2,(H,23,27) BBEMTSNCQSJHRK-UHFFFAOYSA-N
443 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
443 napthalene F2 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
443 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
443 Z90664455 F4 fragment CC(=O)N1CCC(N)CC1 InChI=1S/C7H14N2O/c1-6(10)9-4-2-7(8)3-5-9/h7H,2-5,8H2,1H3 NLHBHVGPMMXWIM-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
443 C4 S1 1
443 C8 S1 1
443 C10 S1 1
443 C13 S1 1
443 C15 S1 1
443 C17 S1 1
443 C22 S1 1
443 C24 S1 1
443 C26 S1 1
443 C28 S1 1
443 C2 S1 1
443 S5 S1 1
443 O6 S1 1
443 O7 S1 1
443 C9 S1 1
443 C11 S1 1
443 C12 S1 1
443 C16 S1 1
443 C18 S1 1
443 C19 S1 1
443 O20 S1 1
443 N21 S1 1
443 C23 S1 1
443 C25 S1 1
443 N27 S1 1
443 C29 S1 1
443 C30 S1 1
443 N31 S1 1
443 C32 S1 1
443 O33 S1 1
443 N21 F1 1
443 C19 F1 1
443 O20 F1 1
443 C2 F1 1
443 C8 F2 1
443 C9 F2 1
443 C10 F2 1
443 C11 F2 1
443 C17 F2 1
443 C18 F2 1
443 C16 F2 1
443 C15 F2 1
443 C13 F2 1
443 C12 F2 1
443 C8 F3 1
443 C18 F3 1
443 C17 F3 1
443 C11 F3 1
443 C10 F3 1
443 C9 F3 1
443 C13 F3 2
443 C15 F3 2
443 C16 F3 2
443 C17 F3 2
443 C11 F3 2
443 C12 F3 2
443 C2 F4 1
443 C19 F4 1
443 O20 F4 1
443 N21 F4 1
443 C22 F4 1
443 C23 F4 1
443 C24 F4 1
443 N27 F4 1
443 C25 F4 1
443 C26 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 443
_pdbe_chem_comp_rdkit_properties.exactmw 479.128
_pdbe_chem_comp_rdkit_properties.amw 479.986
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 32
_pdbe_chem_comp_rdkit_properties.NumAtoms 58
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.455
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 228.270
_pdbe_chem_comp_rdkit_properties.tpsa 107.020
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.498
_pdbe_chem_comp_rdkit_properties.CrippenMR 119.705
_pdbe_chem_comp_rdkit_properties.chi0v 16.742
_pdbe_chem_comp_rdkit_properties.chi1v 9.943
_pdbe_chem_comp_rdkit_properties.chi2v 4.962
_pdbe_chem_comp_rdkit_properties.chi3v 4.962
_pdbe_chem_comp_rdkit_properties.chi4v 3.181
_pdbe_chem_comp_rdkit_properties.chi0n 41.169
_pdbe_chem_comp_rdkit_properties.chi1n 20.937
_pdbe_chem_comp_rdkit_properties.chi2n 3.577
_pdbe_chem_comp_rdkit_properties.chi3n 3.577
_pdbe_chem_comp_rdkit_properties.chi4n 2.184
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.360
_pdbe_chem_comp_rdkit_properties.kappa1 7.070
_pdbe_chem_comp_rdkit_properties.kappa2 9.248
_pdbe_chem_comp_rdkit_properties.kappa3 4.843
_pdbe_chem_comp_rdkit_properties.Phi 2.043
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
443 UniChem ChEMBL CHEMBL1095032
443 UniChem DrugBank DB11984
443 UniChem PDBe 443
443 UniChem 'PubChem DOTF' 99431608
443 UniChem ZINC ZINC000013986542
443 UniChem fdasrs Y3WB03966W
443 UniChem SureChEMBL SCHEMBL766143
443 UniChem 'PubChem TPHARMA' 16744777
443 UniChem Nikkaji J2.801.265I
443 UniChem BindingDb 50317098
443 UniChem BRENDA 40318
443 UniChem BRENDA 40400
443 UniChem ClinicalTrials 'TAK 442'
443 UniChem ClinicalTrials TAK-442
443 UniChem 'Probes And Drugs' PD058754
443 UniChem PubChem 11641515
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
443 C4 1.270 -1.906 1.991 ETKDGv3 1
443 C8 3.523 -0.110 1.468 ETKDGv3 2
443 C10 5.857 -0.811 1.252 ETKDGv3 3
443 C13 7.384 1.049 -1.674 ETKDGv3 4
443 C15 6.219 1.851 -2.109 ETKDGv3 5
443 C17 4.925 0.840 -0.299 ETKDGv3 6
443 C22 -0.662 0.519 -1.050 ETKDGv3 7
443 C24 -3.146 0.066 -1.061 ETKDGv3 8
443 C26 -1.557 -1.437 0.310 ETKDGv3 9
443 C28 -5.437 0.965 -1.665 ETKDGv3 10
443 O1 0.808 -3.612 0.361 ETKDGv3 11
443 C2 1.420 -2.360 0.528 ETKDGv3 12
443 S5 1.989 -0.296 2.315 ETKDGv3 13
443 O6 2.231 -0.153 3.791 ETKDGv3 14
443 O7 1.024 0.775 1.887 ETKDGv3 15
443 C9 4.690 -0.913 1.900 ETKDGv3 16
443 C11 5.988 0.106 0.098 ETKDGv3 17
443 C12 7.274 0.220 -0.626 ETKDGv3 18
443 CL14 8.906 1.187 -2.535 ETKDGv3 19
443 C16 5.054 1.753 -1.458 ETKDGv3 20
443 C18 3.638 0.724 0.422 ETKDGv3 21
443 C19 0.876 -1.368 -0.484 ETKDGv3 22
443 O20 1.634 -1.033 -1.436 ETKDGv3 23
443 N21 -0.447 -0.788 -0.407 ETKDGv3 24
443 C23 -2.046 1.093 -0.727 ETKDGv3 25
443 C25 -2.852 -1.357 -0.511 ETKDGv3 26
443 N27 -4.473 0.552 -0.630 ETKDGv3 27
443 C29 -6.878 0.947 -1.144 ETKDGv3 28
443 C30 -6.995 1.798 0.118 ETKDGv3 29
443 N31 -6.059 1.326 1.131 ETKDGv3 30
443 C32 -4.792 0.771 0.764 ETKDGv3 31
443 O33 -3.980 0.446 1.671 ETKDGv3 32
443 H4 0.209 -1.896 2.304 ETKDGv3 33
443 H4A 1.788 -2.644 2.639 ETKDGv3 34
443 H10 6.704 -1.405 1.574 ETKDGv3 35
443 H15 6.310 2.519 -2.956 ETKDGv3 36
443 H22 -0.561 0.408 -2.152 ETKDGv3 37
443 H22A 0.110 1.239 -0.701 ETKDGv3 38
443 H24 -3.137 -0.022 -2.172 ETKDGv3 39
443 H26 -1.348 -2.507 0.504 ETKDGv3 40
443 H26A -1.706 -0.933 1.288 ETKDGv3 41
443 H28 -5.380 0.279 -2.538 ETKDGv3 42
443 H28A -5.179 1.989 -2.013 ETKDGv3 43
443 HO1 1.139 -3.982 -0.499 ETKDGv3 44
443 H2 2.514 -2.481 0.345 ETKDGv3 45
443 H9 4.599 -1.590 2.739 ETKDGv3 46
443 H12 8.127 -0.368 -0.308 ETKDGv3 47
443 H16 4.205 2.343 -1.783 ETKDGv3 48
443 H18 2.789 1.307 0.088 ETKDGv3 49
443 H23 -2.209 2.018 -1.320 ETKDGv3 50
443 H23A -2.071 1.374 0.346 ETKDGv3 51
443 H25 -3.695 -1.730 0.109 ETKDGv3 52
443 H25A -2.760 -2.062 -1.367 ETKDGv3 53
443 H29 -7.178 -0.100 -0.917 ETKDGv3 54
443 H29A -7.561 1.345 -1.925 ETKDGv3 55
443 H30 -6.772 2.860 -0.120 ETKDGv3 56
443 H30A -8.032 1.737 0.513 ETKDGv3 57
443 HN31 -6.291 1.460 2.141 ETKDGv3 58
#