data_48L
#
_chem_comp.id 48L
_chem_comp.name
4-({(4S,5R)-4-(5-bromo-2-fluorophenyl)-5-(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C30 H29 Br Cl F N4 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-03-28
_chem_comp.pdbx_modified_date 2016-01-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 643.931
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 48L
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2N0W
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
48L N N N 0 1 N N N N N N -0.515 12.102 -10.966 -0.825 0.736 -2.208 N 48L 1
48L CG1 CG1 C 0 1 Y N N N N N 2.698 13.014 -10.651 1.462 -1.135 -0.444 CG1 48L 2
48L CG2 CG2 C 0 1 Y N N N N N 1.108 10.911 -9.398 1.599 0.959 -1.979 CG2 48L 3
48L CG3 CG3 C 0 1 Y N N N N N -0.897 13.195 -13.092 -2.905 0.499 -0.965 CG3 48L 4
48L CD1 CD1 C 0 1 Y N N N N N 2.918 12.551 -11.954 2.578 -1.944 -0.559 CD1 48L 5
48L CD2 CD2 C 0 1 Y N N N N N 3.786 13.142 -9.787 1.336 -0.282 0.637 CD2 48L 6
48L CD3 CD3 C 0 1 Y N N N N N 1.469 9.974 -10.371 1.374 1.970 -1.066 CD3 48L 7
48L CD4 CD4 C 0 1 Y N N N N N 1.428 10.652 -8.061 2.869 0.764 -2.497 CD4 48L 8
48L CD5 CD5 C 0 1 Y N N N N N -1.992 12.381 -13.414 -3.899 0.680 -1.928 CD5 48L 9
48L CD6 CD6 C 0 1 Y N N N N N -0.347 14.000 -14.105 -3.199 0.717 0.388 CD6 48L 10
48L CE1 CE1 C 0 1 Y N N N N N 4.205 12.220 -12.380 3.567 -1.900 0.405 CE1 48L 11
48L CE2 CE2 C 0 1 Y N N N N N 5.071 12.820 -10.214 2.325 -0.236 1.601 CE2 48L 12
48L CE3 CE3 C 0 1 Y N N N N N 2.071 9.469 -7.698 3.911 1.584 -2.099 CE3 48L 13
48L CE4 CE4 C 0 1 Y N N N N N 2.134 8.805 -10.009 2.416 2.789 -0.669 CE4 48L 14
48L CE5 CE5 C 0 1 Y N N N N N -2.591 12.453 -14.669 -5.163 1.072 -1.547 CE5 48L 15
48L CE6 CE6 C 0 1 Y N N N N N -0.971 14.088 -15.350 -4.473 1.111 0.760 CE6 48L 16
48L CZ1 CZ1 C 0 1 Y N N N N N 5.280 12.358 -11.507 3.441 -1.046 1.486 CZ1 48L 17
48L CZ2 CZ2 C 0 1 Y N N N N N 2.425 8.539 -8.673 3.684 2.596 -1.185 CZ2 48L 18
48L CZ3 CZ3 C 0 1 Y N N N N N -2.101 13.330 -15.625 -5.454 1.289 -0.205 CZ3 48L 19
48L CL CL CL 0 0 N N N N N N 6.881 11.952 -12.014 4.683 -0.990 2.698 CL 48L 20
48L CM1 CM1 C 0 1 N N N N N N -3.145 14.654 -17.395 -7.664 1.840 -0.881 CM1 48L 21
48L CM2 CM2 C 0 1 N N N N N N 2.299 13.783 -15.719 -1.678 -0.138 3.581 CM2 48L 22
48L CM3 CM3 C 0 1 N N N N N N 2.995 15.672 -14.195 -2.621 2.128 3.115 CM3 48L 23
48L C1 C1 C 0 1 N N N N N N -1.493 18.207 -12.889 0.650 -4.764 -0.497 C1 48L 24
48L N1 N1 N 0 1 N N N N N N -2.601 17.479 -13.101 -0.254 -5.666 -0.114 N1 48L 25
48L O1 O1 O 0 1 N N N N N N -1.469 19.347 -13.314 1.597 -5.137 -1.157 O1 48L 26
48L C2 C2 C 0 1 N N N N N N -2.831 16.136 -12.555 -1.484 -5.352 0.600 C2 48L 27
48L N2 N2 N 0 1 N N N N N N -0.493 16.164 -11.665 -0.798 -3.030 0.371 N2 48L 28
48L C3 C3 C 0 1 N N N N N N -1.903 15.827 -11.366 -1.367 -4.005 1.316 C3 48L 29
48L N3 N3 N 0 1 N N N N N N 0.516 14.112 -11.147 -0.947 -1.068 -0.885 N3 48L 30
48L O3 O3 O 0 1 N N N N N N -2.707 13.384 -16.858 -6.702 1.676 0.163 O3 48L 31
48L C4 C4 C 0 1 N N N N N N -0.329 17.573 -12.127 0.546 -3.302 -0.156 C4 48L 32
48L C5 C5 C 0 1 N N N N N N 0.585 15.460 -11.220 -1.485 -1.932 -0.002 C5 48L 33
48L O5 O5 O 0 1 N N N N N N 1.590 16.054 -10.871 -2.590 -1.721 0.459 O5 48L 34
48L C6 C6 C 0 1 N N N N N N -0.372 13.147 -11.691 -1.550 0.072 -1.369 C6 48L 35
48L O6 O6 O 0 1 N N N N N N 0.870 14.620 -13.902 -2.238 0.543 1.331 O6 48L 36
48L C7 C7 C 0 1 N N S N N N 0.382 12.202 -9.779 0.466 0.063 -2.407 C7 48L 37
48L C8 C8 C 0 1 N N R N N N 1.305 13.399 -10.142 0.387 -1.179 -1.498 C8 48L 38
48L C9 C9 C 0 1 N N N N N N 1.814 15.014 -14.925 -2.641 0.656 2.697 C9 48L 39
48L BR BR BR 0 0 N N N N N N 2.656 7.569 -11.352 2.106 4.174 0.581 BR 48L 40
48L F F F 0 1 N N N N N N 1.121 11.541 -7.098 3.091 -0.225 -3.390 F 48L 41
48L HD1 HD1 H 0 1 N N N N N N 2.085 12.449 -12.634 2.675 -2.611 -1.403 HD1 48L 42
48L HD2 HD2 H 0 1 N N N N N N 3.630 13.494 -8.778 0.465 0.350 0.727 HD2 48L 43
48L HD3 HD3 H 0 1 N N N N N N 1.231 10.158 -11.408 0.384 2.122 -0.662 HD3 48L 44
48L HD5 HD5 H 0 1 N N N N N N -2.376 11.689 -12.679 -3.677 0.513 -2.972 HD5 48L 45
48L HE1 HE1 H 0 1 N N N N N N 4.366 11.858 -13.385 4.438 -2.532 0.314 HE1 48L 46
48L HE2 HE2 H 0 1 N N N N N N 5.907 12.930 -9.539 2.226 0.431 2.445 HE2 48L 47
48L HE3 HE3 H 0 1 N N N N N N 2.295 9.274 -6.660 4.902 1.433 -2.502 HE3 48L 48
48L HE5 HE5 H 0 1 N N N N N N -3.439 11.825 -14.898 -5.931 1.212 -2.294 HE5 48L 49
48L HE6 HE6 H 0 1 N N N N N N -0.572 14.750 -16.104 -4.703 1.280 1.801 HE6 48L 50
48L HZ2 HZ2 H 0 1 N N N N N N 2.920 7.620 -8.396 4.497 3.235 -0.874 HZ2 48L 51
48L HM11 HM11 H 0 0 N N N N N N -3.603 14.497 -18.383 -8.616 2.151 -0.452 HM11 48L 52
48L HM12 HM12 H 0 0 N N N N N N -3.884 15.104 -16.716 -7.315 2.601 -1.580 HM12 48L 53
48L HM13 HM13 H 0 0 N N N N N N -2.281 15.328 -17.494 -7.794 0.895 -1.408 HM13 48L 54
48L HM21 HM21 H 0 0 N N N N N N 1.446 13.321 -16.237 -1.985 -0.052 4.623 HM21 48L 55
48L HM22 HM22 H 0 0 N N N N N N 3.050 14.097 -16.459 -1.692 -1.187 3.283 HM22 48L 56
48L HM23 HM23 H 0 0 N N N N N N 2.747 13.054 -15.028 -0.669 0.258 3.466 HM23 48L 57
48L HM31 HM31 H 0 0 N N N N N N 2.638 16.547 -13.633 -1.612 2.524 3.000 HM31 48L 58
48L HM32 HM32 H 0 0 N N N N N N 3.445 14.948 -13.499 -3.308 2.693 2.485 HM32 48L 59
48L HM33 HM33 H 0 0 N N N N N N 3.749 15.991 -14.930 -2.929 2.214 4.157 HM33 48L 60
48L HN1 HN1 H 0 1 N N N N N N -3.319 17.879 -13.670 -0.080 -6.597 -0.326 HN1 48L 61
48L H21 H21 H 0 1 N N N N N N -3.876 16.064 -12.218 -2.310 -5.311 -0.110 H21 48L 62
48L H22 H22 H 0 1 N N N N N N -2.650 15.395 -13.348 -1.682 -6.134 1.334 H22 48L 63
48L H31 H31 H 0 1 N N N N N N -2.232 16.414 -10.496 -2.354 -3.673 1.638 H31 48L 64
48L H32 H32 H 0 1 N N N N N N -1.970 14.754 -11.132 -0.712 -4.104 2.181 H32 48L 65
48L H41 H41 H 0 1 N N N N N N 0.551 17.603 -12.786 1.286 -3.052 0.605 H41 48L 66
48L H42 H42 H 0 1 N N N N N N -0.142 18.192 -11.237 0.722 -2.705 -1.050 H42 48L 67
48L H7 H7 H 0 1 N N N N N N -0.227 12.508 -8.916 0.586 -0.232 -3.450 H7 48L 68
48L H8 H8 H 0 1 N N N N N N 1.420 14.031 -9.249 0.464 -2.094 -2.086 H8 48L 69
48L H9 H9 H 0 1 N N N N N N 1.360 15.739 -15.616 -3.650 0.259 2.812 H9 48L 70
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
48L N C6 DOUB N N 1
48L N C7 SING N N 2
48L CG1 CD1 DOUB Y N 3
48L CG1 CD2 SING Y N 4
48L CG1 C8 SING N N 5
48L CG2 CD3 DOUB Y N 6
48L CG2 CD4 SING Y N 7
48L CG2 C7 SING N N 8
48L CG3 CD5 DOUB Y N 9
48L CG3 CD6 SING Y N 10
48L CG3 C6 SING N N 11
48L CD1 CE1 SING Y N 12
48L CD2 CE2 DOUB Y N 13
48L CD3 CE4 SING Y N 14
48L CD4 CE3 DOUB Y N 15
48L CD4 F SING N N 16
48L CD5 CE5 SING Y N 17
48L CD6 CE6 DOUB Y N 18
48L CD6 O6 SING N N 19
48L CE1 CZ1 DOUB Y N 20
48L CE2 CZ1 SING Y N 21
48L CE3 CZ2 SING Y N 22
48L CE4 CZ2 DOUB Y N 23
48L CE5 CZ3 DOUB Y N 24
48L CE6 CZ3 SING Y N 25
48L CZ3 O3 SING N N 26
48L CM1 O3 SING N N 27
48L CM2 C9 SING N N 28
48L CM3 C9 SING N N 29
48L C1 N1 SING N N 30
48L C1 O1 DOUB N N 31
48L C1 C4 SING N N 32
48L N1 C2 SING N N 33
48L C2 C3 SING N N 34
48L N2 C3 SING N N 35
48L N2 C4 SING N N 36
48L N2 C5 SING N N 37
48L N3 C5 SING N N 38
48L N3 C6 SING N N 39
48L N3 C8 SING N N 40
48L C5 O5 DOUB N N 41
48L O6 C9 SING N N 42
48L C7 C8 SING N N 43
48L CZ1 CL SING N N 44
48L CE4 BR SING N N 45
48L CD1 HD1 SING N N 46
48L CD2 HD2 SING N N 47
48L CD3 HD3 SING N N 48
48L CD5 HD5 SING N N 49
48L CE1 HE1 SING N N 50
48L CE2 HE2 SING N N 51
48L CE3 HE3 SING N N 52
48L CE5 HE5 SING N N 53
48L CE6 HE6 SING N N 54
48L CZ2 HZ2 SING N N 55
48L CM1 HM11 SING N N 56
48L CM1 HM12 SING N N 57
48L CM1 HM13 SING N N 58
48L CM2 HM21 SING N N 59
48L CM2 HM22 SING N N 60
48L CM2 HM23 SING N N 61
48L CM3 HM31 SING N N 62
48L CM3 HM32 SING N N 63
48L CM3 HM33 SING N N 64
48L N1 HN1 SING N N 65
48L C2 H21 SING N N 66
48L C2 H22 SING N N 67
48L C3 H31 SING N N 68
48L C3 H32 SING N N 69
48L C4 H41 SING N N 70
48L C4 H42 SING N N 71
48L C7 H7 SING N N 72
48L C8 H8 SING N N 73
48L C9 H9 SING N N 74
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
48L SMILES ACDLabs 12.01 N4=C(c1ccc(cc1OC(C)C)OC)N(C(N2CCNC(=O)C2)=O)C(c3ccc(cc3)Cl)C4c5cc(ccc5F)Br
48L InChI InChI 1.03 InChI=1S/C30H29BrClFN4O4/c1-17(2)41-25-15-21(40-3)9-10-22(25)29-35-27(23-14-19(31)6-11-24(23)33)28(18-4-7-20(32)8-5-18)37(29)30(39)36-13-12-34-26(38)16-36/h4-11,14-15,17,27-28H,12-13,16H2,1-3H3,(H,34,38)/t27-,28+/m0/s1
48L InChIKey InChI 1.03 HYPWYUYQMBEAQR-WUFINQPMSA-N
48L SMILES_CANONICAL CACTVS 3.385 COc1ccc(c(OC(C)C)c1)C2=N[C@H]([C@H](N2C(=O)N3CCNC(=O)C3)c4ccc(Cl)cc4)c5cc(Br)ccc5F
48L SMILES CACTVS 3.385 COc1ccc(c(OC(C)C)c1)C2=N[CH]([CH](N2C(=O)N3CCNC(=O)C3)c4ccc(Cl)cc4)c5cc(Br)ccc5F
48L SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CC(C)Oc1cc(ccc1C2=N[C@H]([C@H](N2C(=O)N3CCNC(=O)C3)c4ccc(cc4)Cl)c5cc(ccc5F)Br)OC
48L SMILES "OpenEye OEToolkits" 1.7.6 CC(C)Oc1cc(ccc1C2=NC(C(N2C(=O)N3CCNC(=O)C3)c4ccc(cc4)Cl)c5cc(ccc5F)Br)OC
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
48L "SYSTEMATIC NAME" ACDLabs 12.01 4-({(4S,5R)-4-(5-bromo-2-fluorophenyl)-5-(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one
48L "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 4-[[(4S,5R)-4-(5-bromanyl-2-fluoranyl-phenyl)-5-(4-chlorophenyl)-2-(4-methoxy-2-propan-2-yloxy-phenyl)-4,5-dihydroimidazol-1-yl]carbonyl]piperazin-2-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
48L 'Create component' 2015-03-28 RCSB
48L 'Initial release' 2016-01-27 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
48L N N 6.983 0.519 1
48L CG1 C 9.828 3.159 2
48L CG2 C 6.564 3.159 3
48L CG3 C 8.196 -1.863 4
48L CD1 C 9.218 4.529 5
48L CD2 C 11.320 3.002 6
48L CD3 C 7.175 4.529 7
48L CD4 C 5.073 3.002 8
48L CD5 C 9.495 -2.613 9
48L CD6 C 6.897 -2.613 10
48L CE1 C 10.099 5.743 11
48L CE2 C 12.201 4.216 12
48L CE3 C 4.191 4.216 13
48L CE4 C 6.293 5.743 14
48L CE5 C 9.495 -4.113 15
48L CE6 C 6.897 -4.113 16
48L CZ1 C 11.591 5.586 17
48L CZ2 C 4.801 5.586 18
48L CZ3 C 8.196 -4.863 19
48L CL Cl 12.473 6.799 20
48L CM1 C 9.495 -7.113 21
48L CM2 C 3.000 -1.863 22
48L CM3 C 4.299 -4.113 23
48L C1 C 14.774 -0.436 24
48L N1 N 15.238 0.991 25
48L O1 O 15.778 -1.551 26
48L C2 C 14.234 2.106 27
48L N2 N 12.303 0.367 28
48L C3 C 12.767 1.794 29
48L N3 N 9.410 0.519 30
48L O3 O 8.196 -6.363 31
48L C4 C 13.307 -0.748 32
48L C5 C 10.836 0.055 33
48L O5 O 11.148 -1.412 34
48L C6 C 8.196 -0.363 35
48L O6 O 5.598 -1.863 36
48L C7 C 7.446 1.945 37
48L C8 C 8.946 1.945 38
48L C9 C 4.299 -2.613 39
48L BR Br 6.903 7.113 40
48L F F 4.463 1.632 41
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
48L N C6 DOUBLE NONE 1
48L N C7 SINGLE NONE 2
48L CG1 CD1 DOUBLE NONE 3
48L CG1 CD2 SINGLE NONE 4
48L C8 CG1 SINGLE BEGINWEDGE 5
48L CG2 CD3 DOUBLE NONE 6
48L CG2 CD4 SINGLE NONE 7
48L C7 CG2 SINGLE BEGINWEDGE 8
48L CG3 CD5 DOUBLE NONE 9
48L CG3 CD6 SINGLE NONE 10
48L CG3 C6 SINGLE NONE 11
48L CD1 CE1 SINGLE NONE 12
48L CD2 CE2 DOUBLE NONE 13
48L CD3 CE4 SINGLE NONE 14
48L CD4 CE3 DOUBLE NONE 15
48L CD4 F SINGLE NONE 16
48L CD5 CE5 SINGLE NONE 17
48L CD6 CE6 DOUBLE NONE 18
48L CD6 O6 SINGLE NONE 19
48L CE1 CZ1 DOUBLE NONE 20
48L CE2 CZ1 SINGLE NONE 21
48L CE3 CZ2 SINGLE NONE 22
48L CE4 CZ2 DOUBLE NONE 23
48L CE5 CZ3 DOUBLE NONE 24
48L CE6 CZ3 SINGLE NONE 25
48L CZ3 O3 SINGLE NONE 26
48L CM1 O3 SINGLE NONE 27
48L CM2 C9 SINGLE NONE 28
48L CM3 C9 SINGLE NONE 29
48L C1 N1 SINGLE NONE 30
48L C1 O1 DOUBLE NONE 31
48L C1 C4 SINGLE NONE 32
48L N1 C2 SINGLE NONE 33
48L C2 C3 SINGLE NONE 34
48L N2 C3 SINGLE NONE 35
48L N2 C4 SINGLE NONE 36
48L N2 C5 SINGLE NONE 37
48L N3 C5 SINGLE NONE 38
48L N3 C6 SINGLE NONE 39
48L N3 C8 SINGLE NONE 40
48L C5 O5 DOUBLE NONE 41
48L O6 C9 SINGLE NONE 42
48L C7 C8 SINGLE NONE 43
48L CZ1 CL SINGLE NONE 44
48L CE4 BR SINGLE NONE 45
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
48L MurckoScaffold S1 scaffold 'O=C1CN(C(=O)N2C(c3ccccc3)=N[C@@H](c3ccccc3)[C@H]2c2ccccc2)CCN1' InChI=1S/C26H24N4O2/c31-22-18-29(17-16-27-22)26(32)30-24(20-12-6-2-7-13-20)23(19-10-4-1-5-11-19)28-25(30)21-14-8-3-9-15-21/h1-15,23-24H,16-18H2,(H,27,31)/t23-,24+/m0/s1 CWSOFJGIQRVVDO-BJKOFHAPSA-N
48L amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
48L peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
48L phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
48L piperazine F4 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
48L Z147652454 F5 fragment CCNC(=O)N1CCNCC1.Cl 'InChI=1S/C7H15N3O.ClH/c1-2-9-7(11)10-5-3-8-4-6-10;/h8H,2-6H2,1H3,(H,9,11);1H' HSHDAILAKYFNRY-UHFFFAOYSA-N
48L Z285210906 F6 fragment CN(Cc1ccccc1)C(=O)N1CCNCC1.Cl 'InChI=1S/C13H19N3O.ClH/c1-15(11-12-5-3-2-4-6-12)13(17)16-9-7-14-8-10-16;/h2-6,14H,7-11H2,1H3;1H' RETVBJGYIOMAIG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
48L N S1 1
48L CG1 S1 1
48L CG2 S1 1
48L CG3 S1 1
48L CD1 S1 1
48L CD2 S1 1
48L CD3 S1 1
48L CD4 S1 1
48L CD5 S1 1
48L CD6 S1 1
48L CE1 S1 1
48L CE2 S1 1
48L CE3 S1 1
48L CE4 S1 1
48L CE5 S1 1
48L CE6 S1 1
48L CZ1 S1 1
48L CZ2 S1 1
48L CZ3 S1 1
48L C1 S1 1
48L N1 S1 1
48L O1 S1 1
48L C2 S1 1
48L N2 S1 1
48L C3 S1 1
48L N3 S1 1
48L C4 S1 1
48L C5 S1 1
48L O5 S1 1
48L C6 S1 1
48L C7 S1 1
48L C8 S1 1
48L N1 F1 1
48L C1 F1 1
48L O1 F1 1
48L C4 F1 1
48L O1 F2 1
48L C1 F2 1
48L C4 F2 1
48L N2 F2 1
48L CG1 F3 1
48L CD1 F3 1
48L CE1 F3 1
48L CZ1 F3 1
48L CE2 F3 1
48L CD2 F3 1
48L CG2 F3 2
48L CD3 F3 2
48L CE4 F3 2
48L CZ2 F3 2
48L CE3 F3 2
48L CD4 F3 2
48L CG3 F3 3
48L CD5 F3 3
48L CE5 F3 3
48L CZ3 F3 3
48L CE6 F3 3
48L CD6 F3 3
48L N1 F4 1
48L C1 F4 1
48L C4 F4 1
48L N2 F4 1
48L C3 F4 1
48L C2 F4 1
48L CL F5 1
48L CG1 F5 1
48L C8 F5 1
48L N3 F5 1
48L C5 F5 1
48L O5 F5 1
48L N2 F5 1
48L C3 F5 1
48L C2 F5 1
48L N1 F5 1
48L C1 F5 1
48L C4 F5 1
48L CL F5 2
48L CG3 F5 2
48L C6 F5 2
48L N3 F5 2
48L C5 F5 2
48L O5 F5 2
48L N2 F5 2
48L C3 F5 2
48L C2 F5 2
48L N1 F5 2
48L C1 F5 2
48L C4 F5 2
48L CL F5 3
48L C7 F5 3
48L C8 F5 3
48L N3 F5 3
48L C5 F5 3
48L O5 F5 3
48L N2 F5 3
48L C3 F5 3
48L C2 F5 3
48L N1 F5 3
48L C1 F5 3
48L C4 F5 3
48L CL F6 1
48L C6 F6 1
48L N3 F6 1
48L C8 F6 1
48L CG1 F6 1
48L CD1 F6 1
48L CE1 F6 1
48L CZ1 F6 1
48L CE2 F6 1
48L CD2 F6 1
48L C5 F6 1
48L O5 F6 1
48L N2 F6 1
48L C3 F6 1
48L C2 F6 1
48L N1 F6 1
48L C1 F6 1
48L C4 F6 1
48L CL F6 2
48L C8 F6 2
48L N3 F6 2
48L C6 F6 2
48L CG3 F6 2
48L CD5 F6 2
48L CE5 F6 2
48L CZ3 F6 2
48L CE6 F6 2
48L CD6 F6 2
48L C5 F6 2
48L O5 F6 2
48L N2 F6 2
48L C3 F6 2
48L C2 F6 2
48L N1 F6 2
48L C1 F6 2
48L C4 F6 2
#
_pdbe_chem_comp_rdkit_properties.comp_id 48L
_pdbe_chem_comp_rdkit_properties.exactmw 642.104
_pdbe_chem_comp_rdkit_properties.amw 643.941
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 41
_pdbe_chem_comp_rdkit_properties.NumAtoms 70
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.300
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 291.567
_pdbe_chem_comp_rdkit_properties.tpsa 83.470
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.045
_pdbe_chem_comp_rdkit_properties.CrippenMR 156.129
_pdbe_chem_comp_rdkit_properties.chi0v 21.898
_pdbe_chem_comp_rdkit_properties.chi1v 11.699
_pdbe_chem_comp_rdkit_properties.chi2v 5.461
_pdbe_chem_comp_rdkit_properties.chi3v 5.461
_pdbe_chem_comp_rdkit_properties.chi4v 3.748
_pdbe_chem_comp_rdkit_properties.chi0n 48.556
_pdbe_chem_comp_rdkit_properties.chi1n 24.975
_pdbe_chem_comp_rdkit_properties.chi2n 4.876
_pdbe_chem_comp_rdkit_properties.chi3n 4.876
_pdbe_chem_comp_rdkit_properties.chi4n 3.356
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.630
_pdbe_chem_comp_rdkit_properties.kappa1 9.982
_pdbe_chem_comp_rdkit_properties.kappa2 12.081
_pdbe_chem_comp_rdkit_properties.kappa3 6.036
_pdbe_chem_comp_rdkit_properties.Phi 2.941
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
48L UniChem PDBe 48L
48L UniChem ZINC ZINC000263620538
48L UniChem SureChEMBL SCHEMBL18133718
48L UniChem PubChem 122606275
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
48L N 0.698 -1.468 -0.379 ETKDGv3 1
48L CG1 -2.482 -0.408 -0.835 ETKDGv3 2
48L CG2 -1.162 -2.917 -1.119 ETKDGv3 3
48L CG3 1.651 0.287 0.999 ETKDGv3 4
48L CD1 -3.565 -0.567 -1.619 ETKDGv3 5
48L CD2 -2.658 -0.396 0.643 ETKDGv3 6
48L CD3 -1.378 -3.363 0.136 ETKDGv3 7
48L CD4 -1.856 -3.589 -2.251 ETKDGv3 8
48L CD5 1.295 1.348 1.744 ETKDGv3 9
48L CD6 2.958 -0.385 1.259 ETKDGv3 10
48L CE1 -4.910 -0.700 -1.021 ETKDGv3 11
48L CE2 -3.877 -0.523 1.181 ETKDGv3 12
48L CE3 -2.668 -4.629 -2.023 ETKDGv3 13
48L CE4 -2.274 -4.513 0.380 ETKDGv3 14
48L CE5 2.183 1.856 2.805 ETKDGv3 15
48L CE6 3.756 0.083 2.242 ETKDGv3 16
48L CZ1 -5.059 -0.679 0.310 ETKDGv3 17
48L CZ2 -2.886 -5.114 -0.647 ETKDGv3 18
48L CZ3 3.360 1.254 3.050 ETKDGv3 19
48L CL -6.652 -0.844 1.023 ETKDGv3 20
48L CM1 4.005 2.805 4.910 ETKDGv3 21
48L CM2 5.644 -1.358 -0.215 ETKDGv3 22
48L CM3 4.377 -3.524 -0.238 ETKDGv3 23
48L C1 -2.739 4.216 -0.335 ETKDGv3 24
48L N1 -2.603 5.190 -1.367 ETKDGv3 25
48L O1 -3.319 4.509 0.744 ETKDGv3 26
48L C2 -2.023 4.787 -2.641 ETKDGv3 27
48L N2 -0.992 2.877 -1.397 ETKDGv3 28
48L C3 -0.768 3.941 -2.397 ETKDGv3 29
48L N3 -0.242 0.583 -0.710 ETKDGv3 30
48L O3 4.241 1.694 4.051 ETKDGv3 31
48L C4 -2.210 2.835 -0.567 ETKDGv3 32
48L C5 0.053 1.909 -1.187 ETKDGv3 33
48L O5 1.249 2.222 -1.438 ETKDGv3 34
48L C6 0.735 -0.222 -0.051 ETKDGv3 35
48L O6 3.313 -1.490 0.462 ETKDGv3 36
48L C7 -0.321 -1.683 -1.397 ETKDGv3 37
48L C8 -1.098 -0.338 -1.457 ETKDGv3 38
48L C9 4.560 -2.188 0.480 ETKDGv3 39
48L BR -2.571 -5.119 2.166 ETKDGv3 40
48L F -1.683 -3.144 -3.521 ETKDGv3 41
48L HD1 -3.467 -0.612 -2.696 ETKDGv3 42
48L HD2 -1.801 -0.292 1.296 ETKDGv3 43
48L HD3 -0.922 -2.874 0.987 ETKDGv3 44
48L HD5 0.341 1.838 1.596 ETKDGv3 45
48L HE1 -5.770 -0.819 -1.667 ETKDGv3 46
48L HE2 -3.995 -0.515 2.257 ETKDGv3 47
48L HE3 -3.175 -5.113 -2.848 ETKDGv3 48
48L HE5 1.858 2.714 3.377 ETKDGv3 49
48L HE6 4.705 -0.381 2.466 ETKDGv3 50
48L HZ2 -3.549 -5.952 -0.475 ETKDGv3 51
48L HM11 4.866 2.920 5.600 ETKDGv3 52
48L HM12 3.088 2.633 5.513 ETKDGv3 53
48L HM13 3.901 3.735 4.312 ETKDGv3 54
48L HM21 6.608 -1.909 -0.215 ETKDGv3 55
48L HM22 5.796 -0.394 0.312 ETKDGv3 56
48L HM23 5.349 -1.141 -1.265 ETKDGv3 57
48L HM31 4.064 -3.360 -1.291 ETKDGv3 58
48L HM32 3.594 -4.121 0.276 ETKDGv3 59
48L HM33 5.325 -4.103 -0.225 ETKDGv3 60
48L HN1 -2.875 6.185 -1.199 ETKDGv3 61
48L H21 -1.768 5.685 -3.243 ETKDGv3 62
48L H22 -2.769 4.185 -3.204 ETKDGv3 63
48L H31 0.052 4.604 -2.045 ETKDGv3 64
48L H32 -0.458 3.484 -3.362 ETKDGv3 65
48L H41 -1.988 2.368 0.417 ETKDGv3 66
48L H42 -2.990 2.245 -1.089 ETKDGv3 67
48L H7 0.207 -1.827 -2.366 ETKDGv3 68
48L H8 -1.170 -0.004 -2.518 ETKDGv3 69
48L H9 4.863 -2.411 1.526 ETKDGv3 70
#