data_4HX
#
_chem_comp.id 4HX
_chem_comp.name (4R)-4-(HYDROXY{N~5~-[IMINO(NITROAMINO)METHYL]-L-ORNITHYL}AMINO)-L-PROLINAMIDE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H22 N8 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "4-N-(NW-NITRO-L-ARGININYL)-TRANS-4-HYDROXYAMINO-L-PROLINE AMIDE"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-08-07
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 346.343
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 4HX
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4HX NO NO N 1 1 N N N N N N 10.620 0.273 60.885 10.510 -4.484 -2.676 NO 4HX 1
4HX O2 O2 O -1 1 N N N N N N 10.479 1.150 61.812 10.421 -3.689 -3.618 O2 4HX 2
4HX O3 O3 O 0 1 N N N N N N 10.037 -0.855 61.005 11.287 -5.440 -2.604 O3 4HX 3
4HX N N N 0 1 N N N N N N 16.550 -0.679 56.348 5.383 -4.638 5.709 N 4HX 4
4HX CA CA C 0 1 N N S N N N 16.306 0.607 57.051 5.709 -4.034 4.414 CA 4HX 5
4HX C C C 0 1 N N N N N N 17.600 1.454 57.171 4.411 -4.029 3.603 C 4HX 6
4HX O O O 0 1 N N N N N N 18.673 0.880 57.379 3.854 -5.090 3.305 O 4HX 7
4HX CB CB C 0 1 N N N N N N 15.723 0.222 58.427 6.787 -4.871 3.710 CB 4HX 8
4HX CG CG C 0 1 N N N N N N 14.866 1.322 59.087 7.165 -4.300 2.336 CG 4HX 9
4HX CD CD C 0 1 N N N N N N 13.551 1.580 58.361 8.282 -5.091 1.659 CD 4HX 10
4HX NE NE N 0 1 N N N N N N 12.875 0.292 58.087 8.608 -4.518 0.375 NE 4HX 11
4HX CZ CZ C 0 1 N N N N N N 11.834 -0.116 58.797 9.578 -5.010 -0.487 CZ 4HX 12
4HX NH1 NH1 N 0 1 N N N N N N 11.346 0.614 59.802 9.646 -4.234 -1.642 NH1 4HX 13
4HX NH2 NH2 N 0 1 N N N N N N 11.310 -1.298 58.445 10.288 -6.061 -0.184 NH2 4HX 14
4HX "N1'" "N1'" N 0 1 N N N N N N 17.841 7.812 54.945 1.449 -0.626 -1.455 "N1'" 4HX 15
4HX "N2'" "N2'" N 0 1 N N N N N N 17.494 2.801 57.045 3.934 -2.807 3.213 "N2'" 4HX 16
4HX "O2'" "O2'" O 0 1 N N N N N N 16.213 3.376 56.802 4.545 -1.591 3.536 "O2'" 4HX 17
4HX "N'" "N'" N 0 1 N N N N N N 19.310 4.388 54.994 0.838 -1.347 2.002 "N'" 4HX 18
4HX "CA'" "CA'" C 0 1 N N S N N N 18.327 5.405 55.436 1.755 -1.052 0.891 "CA'" 4HX 19
4HX "C'" "C'" C 0 1 N N N N N N 18.711 6.815 54.953 1.055 -1.393 -0.384 "C'" 4HX 20
4HX "O'" "O'" O 0 1 N N N N N N 19.846 7.069 54.542 0.220 -2.291 -0.450 "O'" 4HX 21
4HX "CB'" "CB'" C 0 1 N N N N N N 18.304 5.237 56.962 3.010 -1.891 1.116 "CB'" 4HX 22
4HX "CG'" "CG'" C 0 1 N N R N N N 18.681 3.740 57.146 2.749 -2.624 2.426 "CG'" 4HX 23
4HX "CD'" "CD'" C 0 1 N N N N N N 19.867 3.663 56.157 1.709 -1.755 3.111 "CD'" 4HX 24
4HX HN1 1HN H 0 1 N N N N N N 16.605 -0.516 55.363 4.970 -4.055 6.402 HN1 4HX 25
4HX HN2 2HN H 0 1 N N N N N N 17.410 -1.076 56.668 5.765 -5.533 5.913 HN2 4HX 26
4HX HA HA H 0 1 N N N N N N 15.607 1.248 56.493 6.088 -3.027 4.603 HA 4HX 27
4HX HB1 1HB H 0 1 N N N N N N 15.086 -0.664 58.287 6.444 -5.908 3.595 HB1 4HX 28
4HX HB2 2HB H 0 1 N N N N N N 16.579 0.044 59.095 7.689 -4.903 4.336 HB2 4HX 29
4HX HG1 1HG H 0 1 N N N N N N 15.447 2.256 59.088 6.284 -4.279 1.683 HG1 4HX 30
4HX HG2 2HG H 0 1 N N N N N N 14.618 0.979 60.102 7.500 -3.264 2.460 HG2 4HX 31
4HX HD1 1HD H 0 1 N N N N N N 13.753 2.097 57.411 9.177 -5.070 2.290 HD1 4HX 32
4HX HD2 2HD H 0 1 N N N N N N 12.902 2.207 58.991 7.994 -6.140 1.532 HD2 4HX 33
4HX HNE HNE H 0 1 N N N N N N 13.214 -0.286 57.345 8.078 -3.696 0.100 HNE 4HX 34
4HX HNH1 HNH1 H 0 0 N N N N N N 11.557 1.590 59.740 9.002 -3.448 -1.689 HNH1 4HX 35
4HX HNH2 HNH2 H 0 0 N N N N N N 10.534 -1.516 59.037 10.946 -6.272 -0.939 HNH2 4HX 36
4HX "H1'1" "1H1'" H 0 0 N N N N N N 16.948 7.524 55.292 1.021 -0.797 -2.359 "H1'1" 4HX 37
4HX "H1'2" "2H1'" H 0 0 N N N N N N 18.050 8.738 54.631 2.149 0.105 -1.377 "H1'2" 4HX 38
4HX "HO2'" "HO2'" H 0 0 N N N N N N 15.761 3.504 57.628 5.132 -1.478 2.769 "HO2'" 4HX 39
4HX "HN'" "HN'" H 0 1 N N N N N N 18.855 3.735 54.388 0.257 -2.150 1.755 "HN'" 4HX 40
4HX "HA'" "HA'" H 0 1 N N N N N N 17.322 5.270 55.009 1.997 0.016 0.870 "HA'" 4HX 41
4HX "HB'1" "1HB'" H 0 0 N N N N N N 19.025 5.904 57.457 3.214 -2.600 0.306 "HB'1" 4HX 42
4HX "HB'2" "2HB'" H 0 0 N N N N N N 17.336 5.499 57.413 3.883 -1.231 1.206 "HB'2" 4HX 43
4HX "HG'" "HG'" H 0 1 N N N N N N 18.992 3.386 58.140 2.338 -3.620 2.221 "HG'" 4HX 44
4HX "HD'1" "1HD'" H 0 0 N N N N N N 20.143 2.627 55.913 1.152 -2.301 3.879 "HD'1" 4HX 45
4HX "HD'2" "2HD'" H 0 0 N N N N N N 20.806 4.086 56.545 2.156 -0.872 3.584 "HD'2" 4HX 46
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4HX NO NH1 SING N N 1
4HX NO O3 DOUB N N 2
4HX NO O2 SING N N 3
4HX N CA SING N N 4
4HX N HN1 SING N N 5
4HX N HN2 SING N N 6
4HX CA C SING N N 7
4HX CA CB SING N N 8
4HX CA HA SING N N 9
4HX C "N2'" SING N N 10
4HX C O DOUB N N 11
4HX CB CG SING N N 12
4HX CB HB1 SING N N 13
4HX CB HB2 SING N N 14
4HX CG CD SING N N 15
4HX CG HG1 SING N N 16
4HX CG HG2 SING N N 17
4HX CD NE SING N N 18
4HX CD HD1 SING N N 19
4HX CD HD2 SING N N 20
4HX NE CZ SING N N 21
4HX NE HNE SING N N 22
4HX CZ NH2 DOUB N Z 23
4HX CZ NH1 SING N N 24
4HX NH1 HNH1 SING N N 25
4HX NH2 HNH2 SING N N 26
4HX "N1'" "C'" SING N N 27
4HX "N1'" "H1'1" SING N N 28
4HX "N1'" "H1'2" SING N N 29
4HX "N2'" "O2'" SING N N 30
4HX "N2'" "CG'" SING N N 31
4HX "O2'" "HO2'" SING N N 32
4HX "N'" "CA'" SING N N 33
4HX "N'" "CD'" SING N N 34
4HX "N'" "HN'" SING N N 35
4HX "CA'" "C'" SING N N 36
4HX "CA'" "CB'" SING N N 37
4HX "CA'" "HA'" SING N N 38
4HX "C'" "O'" DOUB N N 39
4HX "CB'" "CG'" SING N N 40
4HX "CB'" "HB'1" SING N N 41
4HX "CB'" "HB'2" SING N N 42
4HX "CG'" "CD'" SING N N 43
4HX "CG'" "HG'" SING N N 44
4HX "CD'" "HD'1" SING N N 45
4HX "CD'" "HD'2" SING N N 46
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4HX SMILES ACDLabs 10.04 O=C(N)C1NCC(N(O)C(=O)C(N)CCCNC(=[N@H])N[N+]([O-])=O)C1
4HX SMILES_CANONICAL CACTVS 3.341 N[C@@H](CCCNC(=N)N[N+]([O-])=O)C(=O)N(O)[C@H]1CN[C@@H](C1)C(N)=O
4HX SMILES CACTVS 3.341 N[CH](CCCNC(=N)N[N+]([O-])=O)C(=O)N(O)[CH]1CN[CH](C1)C(N)=O
4HX SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "[H]/N=C(/NCCC[C@@H](C(=O)N([C@@H]1C[C@H](NC1)C(=O)N)O)N)\N[N+](=O)[O-]"
4HX SMILES "OpenEye OEToolkits" 1.5.0 "[H]N=C(NCCCC(C(=O)N(C1CC(NC1)C(=O)N)O)N)N[N+](=O)[O-]"
4HX InChI InChI 1.03 InChI=1S/C11H22N8O5/c12-7(2-1-3-15-11(14)17-19(23)24)10(21)18(22)6-4-8(9(13)20)16-5-6/h6-8,16,22H,1-5,12H2,(H2,13,20)(H3,14,15,17)/t6-,7+,8+/m1/s1
4HX InChIKey InChI 1.03 CTHMJCQUZVLLJU-CSMHCCOUSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4HX "SYSTEMATIC NAME" ACDLabs 10.04 (4R)-4-{hydroxy[N~5~-(N-nitrocarbamimidoyl)-L-ornithyl]amino}-L-prolinamide
4HX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (2S,4R)-4-[[(2S)-2-amino-5-[(N-nitrocarbamimidoyl)amino]pentanoyl]-hydroxy-amino]pyrrolidine-2-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4HX 'Create component' 2006-08-07 RCSB
4HX 'Modify descriptor' 2011-06-04 RCSB
4HX 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 4HX
_pdbx_chem_comp_synonyms.name "4-N-(NW-NITRO-L-ARGININYL)-TRANS-4-HYDROXYAMINO-L-PROLINE AMIDE"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 4HX
_pdbe_chem_comp_synonyms.name '4-N-(NW-NITRO-L-ARGININYL)-TRANS-4-HYDROXYAMINO-L-PROLINE AMIDE'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
4HX NO N 18.155 4.477 1
4HX O2 O 18.765 3.107 2
4HX O3 O 19.036 5.691 3
4HX N N 8.932 2.834 4
4HX CA C 9.543 1.464 5
4HX C C 8.661 0.250 6
4HX O O 7.169 0.407 7
4HX CB C 11.034 1.307 8
4HX CG C 11.916 2.521 9
4HX CD C 13.408 2.364 10
4HX NE N 14.290 3.577 11
4HX CZ C 15.781 3.421 12
4HX NH1 N 16.663 4.634 13
4HX NH2 N 16.391 2.050 14
4HX "N1'" N 4.687 -5.691 15
4HX "N2'" N 9.271 -1.120 16
4HX "O2'" O 10.763 -1.277 17
4HX "N'" N 7.639 -4.642 18
4HX "CA'" C 6.426 -3.760 19
4HX "C'" C 4.999 -4.224 20
4HX "O'" O 3.884 -3.220 21
4HX "CB'" C 6.889 -2.334 22
4HX "CG'" C 8.389 -2.334 23
4HX "CD'" C 8.853 -3.760 24
4HX HNH2 H 15.510 0.837 25
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
4HX NO NH1 SINGLE NONE 1
4HX NO O3 DOUBLE NONE 2
4HX NO O2 SINGLE NONE 3
4HX CA N SINGLE BEGINWEDGE 4
4HX CA C SINGLE NONE 5
4HX CA CB SINGLE NONE 6
4HX C "N2'" SINGLE NONE 7
4HX C O DOUBLE NONE 8
4HX CB CG SINGLE NONE 9
4HX CG CD SINGLE NONE 10
4HX CD NE SINGLE NONE 11
4HX NE CZ SINGLE ENDUPRIGHT 12
4HX CZ NH2 DOUBLE NONE 13
4HX CZ NH1 SINGLE ENDUPRIGHT 14
4HX "N1'" "C'" SINGLE NONE 15
4HX "N2'" "O2'" SINGLE NONE 16
4HX "CG'" "N2'" SINGLE BEGINWEDGE 17
4HX "N'" "CA'" SINGLE NONE 18
4HX "N'" "CD'" SINGLE NONE 19
4HX "CA'" "C'" SINGLE BEGINDASH 20
4HX "CA'" "CB'" SINGLE NONE 21
4HX "C'" "O'" DOUBLE NONE 22
4HX "CB'" "CG'" SINGLE NONE 23
4HX "CG'" "CD'" SINGLE NONE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
4HX MurckoScaffold S1 scaffold C1CCNC1 InChI=1S/C4H9N/c1-2-4-5-3-1/h5H,1-4H2 RWRDLPDLKQPQOW-UHFFFAOYSA-N
4HX amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
4HX peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
4HX Z1650040241 F3 fragment CCC(=O)NC1CCNC1 InChI=1S/C7H14N2O/c1-2-7(10)9-6-3-4-8-5-6/h6,8H,2-5H2,1H3,(H,9,10) JTOGNXBWLDRNON-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
4HX "N'" S1 1
4HX "CA'" S1 1
4HX "CB'" S1 1
4HX "CG'" S1 1
4HX "CD'" S1 1
4HX "N1'" F1 1
4HX "C'" F1 1
4HX "O'" F1 1
4HX "CA'" F1 1
4HX "N2'" F1 2
4HX C F1 2
4HX O F1 2
4HX CA F1 2
4HX O F2 1
4HX C F2 1
4HX CA F2 1
4HX N F2 1
4HX "O'" F2 2
4HX "C'" F2 2
4HX "CA'" F2 2
4HX "N'" F2 2
4HX CB F3 1
4HX CA F3 1
4HX C F3 1
4HX O F3 1
4HX "N2'" F3 1
4HX "CG'" F3 1
4HX "CB'" F3 1
4HX "CA'" F3 1
4HX "N'" F3 1
4HX "CD'" F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 4HX
_pdbe_chem_comp_rdkit_properties.exactmw 346.171
_pdbe_chem_comp_rdkit_properties.amw 346.348
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 13
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 9
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 24
_pdbe_chem_comp_rdkit_properties.NumAtoms 46
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.727
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 168.312
_pdbe_chem_comp_rdkit_properties.tpsa 212.730
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.167
_pdbe_chem_comp_rdkit_properties.CrippenMR 81.092
_pdbe_chem_comp_rdkit_properties.chi0v 11.119
_pdbe_chem_comp_rdkit_properties.chi1v 5.392
_pdbe_chem_comp_rdkit_properties.chi2v 1.867
_pdbe_chem_comp_rdkit_properties.chi3v 1.867
_pdbe_chem_comp_rdkit_properties.chi4v 0.986
_pdbe_chem_comp_rdkit_properties.chi0n 33.119
_pdbe_chem_comp_rdkit_properties.chi1n 15.878
_pdbe_chem_comp_rdkit_properties.chi2n 1.867
_pdbe_chem_comp_rdkit_properties.chi3n 1.867
_pdbe_chem_comp_rdkit_properties.chi4n 0.986
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.510
_pdbe_chem_comp_rdkit_properties.kappa1 4.770
_pdbe_chem_comp_rdkit_properties.kappa2 8.950
_pdbe_chem_comp_rdkit_properties.kappa3 5.941
_pdbe_chem_comp_rdkit_properties.Phi 1.779
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
4HX UniChem ChEMBL CHEMBL427286
4HX UniChem PDBe 4HX
4HX UniChem ZINC ZINC000014977543
4HX UniChem 'PubChem TPHARMA' 24903454
4HX UniChem BindingDb 21964
4HX UniChem PubChem 16058622
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
4HX NO 6.321 -0.932 2.910 ETKDGv3 1
4HX O2 7.311 -0.538 2.039 ETKDGv3 2
4HX O3 6.643 -1.421 4.012 ETKDGv3 3
4HX N -0.157 1.952 -3.223 ETKDGv3 4
4HX CA 0.370 1.043 -2.204 ETKDGv3 5
4HX C -0.769 0.364 -1.476 ETKDGv3 6
4HX O -0.723 -0.888 -1.334 ETKDGv3 7
4HX CB 1.297 1.814 -1.236 ETKDGv3 8
4HX CG 1.853 0.971 -0.073 ETKDGv3 9
4HX CD 2.782 -0.156 -0.544 ETKDGv3 10
4HX NE 3.389 -0.828 0.604 ETKDGv3 11
4HX CZ 4.489 -0.279 1.345 ETKDGv3 12
4HX NH1 4.978 -0.985 2.495 ETKDGv3 13
4HX NH2 4.990 0.870 1.009 ETKDGv3 14
4HX "N1'" -5.483 -1.089 1.815 ETKDGv3 15
4HX "N2'" -1.881 1.114 -0.933 ETKDGv3 16
4HX "O2'" -1.914 2.462 -1.080 ETKDGv3 17
4HX "N'" -3.639 -1.867 -0.482 ETKDGv3 18
4HX "CA'" -3.170 -1.668 0.892 ETKDGv3 19
4HX "C'" -4.307 -1.899 1.854 ETKDGv3 20
4HX "O'" -4.222 -2.825 2.705 ETKDGv3 21
4HX "CB'" -2.590 -0.258 1.015 ETKDGv3 22
4HX "CG'" -3.018 0.475 -0.247 ETKDGv3 23
4HX "CD'" -3.725 -0.556 -1.128 ETKDGv3 24
4HX HN1 0.647 2.334 -3.774 ETKDGv3 25
4HX HN2 -0.729 1.393 -3.898 ETKDGv3 26
4HX HA 0.976 0.264 -2.721 ETKDGv3 27
4HX HB1 2.152 2.233 -1.811 ETKDGv3 28
4HX HB2 0.751 2.680 -0.809 ETKDGv3 29
4HX HG1 1.022 0.545 0.529 ETKDGv3 30
4HX HG2 2.420 1.653 0.597 ETKDGv3 31
4HX HD1 2.193 -0.902 -1.119 ETKDGv3 32
4HX HD2 3.576 0.242 -1.212 ETKDGv3 33
4HX HNE 3.043 -1.780 0.859 ETKDGv3 34
4HX HNH1 4.320 -1.618 3.003 ETKDGv3 35
4HX HNH2 5.754 1.333 1.548 ETKDGv3 36
4HX "H1'1" -5.577 -0.305 1.133 ETKDGv3 37
4HX "H1'2" -6.266 -1.268 2.483 ETKDGv3 38
4HX "HO2'" -1.524 2.821 -0.242 ETKDGv3 39
4HX "HN'" -2.927 -2.439 -0.996 ETKDGv3 40
4HX "HA'" -2.364 -2.405 1.123 ETKDGv3 41
4HX "HB'1" -2.959 0.273 1.922 ETKDGv3 42
4HX "HB'2" -1.483 -0.313 1.101 ETKDGv3 43
4HX "HG'" -3.757 1.259 0.036 ETKDGv3 44
4HX "HD'1" -3.298 -0.592 -2.155 ETKDGv3 45
4HX "HD'2" -4.797 -0.285 -1.235 ETKDGv3 46
#