data_4IX # _chem_comp.id 4IX _chem_comp.name (2R,3R,4S,5S,6R)-2-[4-[1-[3-[6-[(Z)-hydroxyiminomethyl]-5-oxidanyl-pyridin-2-yl]propyl]-1,2,3-triazol-4-yl]butoxy]-6-(hydroxymethyl)oxane-3,4,5-triol _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H31 N5 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-02 _chem_comp.pdbx_modified_date 2021-12-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 481.500 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4IX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7P1P _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4IX C02 C1 C 0 1 N N N N N N 101.416 -80.240 -2.904 8.043 2.648 -0.376 C02 4IX 1 4IX C03 C2 C 0 1 N N R N N N 100.085 -80.772 -2.572 7.894 1.272 0.277 C03 4IX 2 4IX C05 C3 C 0 1 N N R N N N 99.132 -82.225 -0.841 6.470 -0.656 0.344 C05 4IX 3 4IX C07 C4 C 0 1 N N N N N N 99.364 -82.697 1.410 4.090 -0.452 0.141 C07 4IX 4 4IX C08 C5 C 0 1 N N N N N N 97.951 -82.722 2.143 2.865 -1.113 -0.494 C08 4IX 5 4IX C09 C6 C 0 1 N N N N N N 97.758 -84.013 2.953 1.609 -0.320 -0.126 C09 4IX 6 4IX C10 C7 C 0 1 N N N N N N 96.818 -83.790 4.150 0.385 -0.981 -0.762 C10 4IX 7 4IX C11 C8 C 0 1 Y N N N N N 95.311 -83.876 3.772 -0.853 -0.201 -0.399 C11 4IX 8 4IX C12 C9 C 0 1 Y N N N N N 94.361 -84.655 4.421 -1.760 0.323 -1.256 C12 4IX 9 4IX C14 C10 C 0 1 N N N N N N 91.935 -85.113 4.212 -3.877 1.643 -0.981 C14 4IX 10 4IX C15 C11 C 0 1 N N N N N N 91.625 -84.774 5.737 -5.131 1.056 -0.329 C15 4IX 11 4IX C16 C12 C 0 1 N N N N N N 92.179 -85.870 6.684 -6.367 1.797 -0.842 C16 4IX 12 4IX C17 C13 C 0 1 Y N N N N N 91.252 -87.105 6.752 -7.602 1.219 -0.200 C17 4IX 13 4IX C18 C14 C 0 1 Y N N N N N 91.182 -87.987 5.678 -8.474 2.056 0.476 C18 4IX 14 4IX C19 C15 C 0 1 Y N N N N N 90.347 -89.109 5.719 -9.609 1.525 1.066 C19 4IX 15 4IX C20 C16 C 0 1 Y N N N N N 89.583 -89.310 6.896 -9.834 0.157 0.958 C20 4IX 16 4IX C22 C17 C 0 1 Y N N N N N 89.691 -88.402 7.942 -8.909 -0.628 0.259 C22 4IX 17 4IX C23 C18 C 0 1 N N N N N N 88.836 -88.637 9.242 -9.129 -2.082 0.132 C23 4IX 18 4IX C29 C19 C 0 1 N N R N N N 97.821 -81.607 -1.355 7.637 -1.590 0.017 C29 4IX 19 4IX C31 C20 C 0 1 N N S N N N 97.939 -80.119 -1.502 8.936 -0.979 0.554 C31 4IX 20 4IX C33 C21 C 0 1 N N S N N N 99.304 -79.675 -1.842 9.120 0.415 -0.052 C33 4IX 21 4IX N13 N1 N 0 1 Y N N N N N 93.194 -84.462 3.820 -2.694 0.933 -0.489 N13 4IX 22 4IX N24 N2 N 0 1 N N N N N N 89.034 -89.672 9.967 -8.277 -2.811 -0.512 N24 4IX 23 4IX N26 N3 N 0 1 Y N N N N N 90.501 -87.343 7.852 -7.837 -0.072 -0.295 N26 4IX 24 4IX N27 N4 N 0 1 Y N N N N N 93.360 -83.593 2.811 -2.363 0.783 0.746 N27 4IX 25 4IX N28 N5 N 0 1 Y N N N N N 94.691 -83.226 2.787 -1.273 0.106 0.834 N28 4IX 26 4IX O01 O1 O 0 1 N N N N N N 101.765 -80.671 -4.187 6.958 3.486 0.026 O01 4IX 27 4IX O04 O2 O 0 1 N N N N N N 100.265 -81.995 -1.742 6.719 0.632 -0.223 O04 4IX 28 4IX O06 O3 O 0 1 N N N N N N 99.366 -81.681 0.406 5.263 -1.192 -0.203 O06 4IX 29 4IX O21 O4 O 0 1 N N N N N N 88.736 -90.408 7.000 -10.933 -0.408 1.521 O21 4IX 30 4IX O25 O5 O 0 1 N N N N N N 90.013 -90.612 9.619 -7.133 -2.215 -1.095 O25 4IX 31 4IX O30 O6 O 0 1 N N N N N N 97.478 -82.168 -2.621 7.418 -2.862 0.631 O30 4IX 32 4IX O32 O7 O 0 1 N N N N N N 97.525 -79.465 -0.257 10.041 -1.809 0.190 O32 4IX 33 4IX O34 O8 O 0 1 N N N N N N 99.197 -78.524 -2.689 10.290 1.024 0.496 O34 4IX 34 4IX H021 H1 H 0 0 N N N N N N 102.154 -80.609 -2.176 8.986 3.098 -0.064 H021 4IX 35 4IX H022 H2 H 0 0 N N N N N N 101.392 -79.141 -2.877 8.035 2.538 -1.461 H022 4IX 36 4IX H031 H3 H 0 0 N N N N N N 99.550 -81.033 -3.497 7.813 1.390 1.357 H031 4IX 37 4IX H051 H4 H 0 0 N N N N N N 98.974 -83.310 -0.748 6.369 -0.563 1.426 H051 4IX 38 4IX H072 H5 H 0 0 N N N N N N 99.551 -83.675 0.942 4.184 0.570 -0.227 H072 4IX 39 4IX H071 H6 H 0 0 N N N N N N 100.154 -82.486 2.146 3.974 -0.438 1.225 H071 4IX 40 4IX H082 H7 H 0 0 N N N N N N 97.886 -81.860 2.824 2.981 -1.127 -1.578 H082 4IX 41 4IX H081 H8 H 0 0 N N N N N N 97.155 -82.652 1.387 2.772 -2.134 -0.126 H081 4IX 42 4IX H091 H9 H 0 0 N N N N N N 97.327 -84.785 2.299 1.493 -0.307 0.958 H091 4IX 43 4IX H092 H10 H 0 0 N N N N N N 98.736 -84.352 3.325 1.703 0.701 -0.494 H092 4IX 44 4IX H101 H11 H 0 0 N N N N N N 97.032 -84.556 4.910 0.501 -0.995 -1.845 H101 4IX 45 4IX H102 H12 H 0 0 N N N N N N 97.017 -82.793 4.569 0.291 -2.003 -0.393 H102 4IX 46 4IX H121 H13 H 0 0 N N N N N N 94.541 -85.303 5.266 -1.742 0.265 -2.334 H121 4IX 47 4IX H141 H14 H 0 0 N N N N N N 91.116 -84.742 3.578 -3.944 1.531 -2.063 H141 4IX 48 4IX H142 H15 H 0 0 N N N N N N 92.030 -86.202 4.089 -3.798 2.700 -0.729 H142 4IX 49 4IX H152 H16 H 0 0 N N N N N N 92.092 -83.811 5.992 -5.210 -0.002 -0.581 H152 4IX 50 4IX H151 H17 H 0 0 N N N N N N 90.536 -84.700 5.873 -5.064 1.167 0.753 H151 4IX 51 4IX H161 H18 H 0 0 N N N N N N 93.167 -86.188 6.319 -6.287 2.854 -0.590 H161 4IX 52 4IX H162 H19 H 0 0 N N N N N N 92.281 -85.447 7.694 -6.434 1.685 -1.924 H162 4IX 53 4IX H181 H20 H 0 0 N N N N N N 91.782 -87.803 4.799 -8.271 3.115 0.543 H181 4IX 54 4IX H191 H21 H 0 0 N N N N N N 90.287 -89.795 4.887 -10.303 2.158 1.599 H191 4IX 55 4IX H231 H22 H 0 0 N N N N N N 88.078 -87.921 9.523 -10.001 -2.537 0.578 H231 4IX 56 4IX H291 H23 H 0 0 N N N N N N 97.028 -81.827 -0.625 7.713 -1.715 -1.063 H291 4IX 57 4IX H311 H24 H 0 0 N N N N N N 97.260 -79.800 -2.307 8.880 -0.902 1.640 H311 4IX 58 4IX H331 H25 H 0 0 N N N N N N 99.843 -79.414 -0.920 9.225 0.331 -1.134 H331 4IX 59 4IX H011 H26 H 0 0 N N N N N N 102.624 -80.333 -4.412 6.988 4.376 -0.352 H011 4IX 60 4IX H211 H27 H 0 0 N N N N N N 88.302 -90.394 7.845 -11.702 -0.439 0.936 H211 4IX 61 4IX H251 H28 H 0 0 N N N N N N 90.025 -91.311 10.262 -6.555 -2.839 -1.556 H251 4IX 62 4IX H301 H29 H 0 0 N N N N N N 97.401 -83.111 -2.539 6.609 -3.305 0.340 H301 4IX 63 4IX H321 H30 H 0 0 N N N N N N 96.646 -79.745 -0.029 9.986 -2.710 0.535 H321 4IX 64 4IX H341 H31 H 0 0 N N N N N N 98.713 -77.842 -2.238 11.106 0.534 0.326 H341 4IX 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4IX O01 C02 SING N N 1 4IX C02 C03 SING N N 2 4IX O34 C33 SING N N 3 4IX O30 C29 SING N N 4 4IX C03 C33 SING N N 5 4IX C03 O04 SING N N 6 4IX C33 C31 SING N N 7 4IX O04 C05 SING N N 8 4IX C31 C29 SING N N 9 4IX C31 O32 SING N N 10 4IX C29 C05 SING N N 11 4IX C05 O06 SING N N 12 4IX O06 C07 SING N N 13 4IX C07 C08 SING N N 14 4IX C08 C09 SING N N 15 4IX N28 N27 DOUB Y N 16 4IX N28 C11 SING Y N 17 4IX N27 N13 SING Y N 18 4IX C09 C10 SING N N 19 4IX C11 C10 SING N N 20 4IX C11 C12 DOUB Y N 21 4IX N13 C14 SING N N 22 4IX N13 C12 SING Y N 23 4IX C14 C15 SING N N 24 4IX C18 C19 DOUB Y N 25 4IX C18 C17 SING Y N 26 4IX C19 C20 SING Y N 27 4IX C15 C16 SING N N 28 4IX C16 C17 SING N N 29 4IX C17 N26 DOUB Y N 30 4IX C20 O21 SING N N 31 4IX C20 C22 DOUB Y N 32 4IX N26 C22 SING Y N 33 4IX C22 C23 SING N N 34 4IX C23 N24 DOUB N Z 35 4IX O25 N24 SING N N 36 4IX C02 H021 SING N N 37 4IX C02 H022 SING N N 38 4IX C03 H031 SING N N 39 4IX C05 H051 SING N N 40 4IX C07 H072 SING N N 41 4IX C07 H071 SING N N 42 4IX C08 H082 SING N N 43 4IX C08 H081 SING N N 44 4IX C09 H091 SING N N 45 4IX C09 H092 SING N N 46 4IX C10 H101 SING N N 47 4IX C10 H102 SING N N 48 4IX C12 H121 SING N N 49 4IX C14 H141 SING N N 50 4IX C14 H142 SING N N 51 4IX C15 H152 SING N N 52 4IX C15 H151 SING N N 53 4IX C16 H161 SING N N 54 4IX C16 H162 SING N N 55 4IX C18 H181 SING N N 56 4IX C19 H191 SING N N 57 4IX C23 H231 SING N N 58 4IX C29 H291 SING N N 59 4IX C31 H311 SING N N 60 4IX C33 H331 SING N N 61 4IX O01 H011 SING N N 62 4IX O21 H211 SING N N 63 4IX O25 H251 SING N N 64 4IX O30 H301 SING N N 65 4IX O32 H321 SING N N 66 4IX O34 H341 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4IX InChI InChI 1.03 InChI=1S/C21H31N5O8/c27-12-17-18(29)19(30)20(31)21(34-17)33-9-2-1-4-14-11-26(25-24-14)8-3-5-13-6-7-16(28)15(23-13)10-22-32/h6-7,10-11,17-21,27-32H,1-5,8-9,12H2/b22-10-/t17-,18-,19+,20-,21-/m1/s1 4IX InChIKey InChI 1.03 XSKZXNAZWMWYGQ-WXHIOXNPSA-N 4IX SMILES_CANONICAL CACTVS 3.385 OC[C@H]1O[C@@H](OCCCCc2cn(CCCc3ccc(O)c(\C=N/O)n3)nn2)[C@H](O)[C@@H](O)[C@@H]1O 4IX SMILES CACTVS 3.385 OC[CH]1O[CH](OCCCCc2cn(CCCc3ccc(O)c(C=NO)n3)nn2)[CH](O)[CH](O)[CH]1O 4IX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1cc(c(nc1CCCn2cc(nn2)CCCCO[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)/C=N\O)O 4IX SMILES "OpenEye OEToolkits" 2.0.7 c1cc(c(nc1CCCn2cc(nn2)CCCCOC3C(C(C(C(O3)CO)O)O)O)C=NO)O # _pdbx_chem_comp_identifier.comp_id 4IX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier (2~{R},3~{R},4~{S},5~{S},6~{R})-2-[4-[1-[3-[6-[(~{Z})-hydroxyiminomethyl]-5-oxidanyl-pyridin-2-yl]propyl]-1,2,3-triazol-4-yl]butoxy]-6-(hydroxymethyl)oxane-3,4,5-triol # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4IX 'Create component' 2021-07-02 PDBE 4IX 'Initial release' 2021-12-29 RCSB # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal 4IX C02 C 3.805 -6.687 1 4IX C03 C 5.104 -7.437 2 4IX C05 C 7.702 -7.437 3 4IX C07 C 9.002 -5.187 4 4IX C08 C 10.301 -4.437 5 4IX C09 C 10.301 -2.937 6 4IX C10 C 11.600 -2.187 7 4IX C11 C 11.600 -0.687 8 4IX C12 C 10.386 0.195 9 4IX C14 C 9.968 2.835 10 4IX C15 C 10.578 4.205 11 4IX C16 C 9.696 5.418 12 4IX C17 C 10.306 6.789 13 4IX C18 C 9.425 8.002 14 4IX C19 C 10.035 9.373 15 4IX C20 C 11.527 9.530 16 4IX C22 C 12.408 8.316 17 4IX C23 C 13.900 8.473 18 4IX C29 C 7.702 -8.937 19 4IX C31 C 6.404 -9.687 20 4IX C33 C 5.104 -8.937 21 4IX N13 N 10.850 1.621 22 4IX N24 N 14.782 7.259 23 4IX N26 N 11.798 6.946 24 4IX N27 N 12.350 1.621 25 4IX N28 N 12.813 0.195 26 4IX O01 O 3.805 -5.187 27 4IX O04 O 6.404 -6.687 28 4IX O06 O 9.002 -6.687 29 4IX O21 O 12.137 10.900 30 4IX O25 O 14.172 5.889 31 4IX O30 O 9.002 -9.687 32 4IX O32 O 6.404 -11.187 33 4IX O34 O 3.805 -9.687 34 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal 4IX O01 C02 SINGLE NONE 1 4IX C03 C02 SINGLE BEGINWEDGE 2 4IX C33 O34 SINGLE BEGINDASH 3 4IX C29 O30 SINGLE BEGINDASH 4 4IX C03 C33 SINGLE NONE 5 4IX C03 O04 SINGLE NONE 6 4IX C33 C31 SINGLE NONE 7 4IX O04 C05 SINGLE NONE 8 4IX C31 C29 SINGLE NONE 9 4IX C31 O32 SINGLE BEGINWEDGE 10 4IX C29 C05 SINGLE NONE 11 4IX C05 O06 SINGLE BEGINWEDGE 12 4IX O06 C07 SINGLE NONE 13 4IX C07 C08 SINGLE NONE 14 4IX C08 C09 SINGLE NONE 15 4IX N28 N27 DOUBLE NONE 16 4IX N28 C11 SINGLE NONE 17 4IX N27 N13 SINGLE NONE 18 4IX C09 C10 SINGLE NONE 19 4IX C11 C10 SINGLE NONE 20 4IX C11 C12 DOUBLE NONE 21 4IX N13 C14 SINGLE NONE 22 4IX N13 C12 SINGLE NONE 23 4IX C14 C15 SINGLE NONE 24 4IX C18 C19 DOUBLE NONE 25 4IX C18 C17 SINGLE NONE 26 4IX C19 C20 SINGLE NONE 27 4IX C15 C16 SINGLE NONE 28 4IX C16 C17 SINGLE NONE 29 4IX C17 N26 DOUBLE NONE 30 4IX C20 O21 SINGLE NONE 31 4IX C20 C22 DOUBLE NONE 32 4IX N26 C22 SINGLE NONE 33 4IX C22 C23 SINGLE ENDUPRIGHT 34 4IX C23 N24 DOUBLE NONE 35 4IX O25 N24 SINGLE ENDUPRIGHT 36 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys 4IX MurckoScaffold S1 scaffold 'c1ccc(CCCn2cc(CCCCO[C@H]3CCCCO3)nn2)nc1' InChI=1S/C19H28N4O2/c1-4-12-20-17(8-1)10-7-13-23-16-18(21-22-23)9-2-5-14-24-19-11-3-6-15-25-19/h1,4,8,12,16,19H,2-3,5-7,9-11,13-15H2/t19-/m1/s1 ZNZKRGJCBSJZDV-LJQANCHMSA-N 4IX pyranose F1 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N 4IX pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal 4IX C03 S1 1 4IX C05 S1 1 4IX C07 S1 1 4IX C08 S1 1 4IX C09 S1 1 4IX C10 S1 1 4IX C11 S1 1 4IX C12 S1 1 4IX C14 S1 1 4IX C15 S1 1 4IX C16 S1 1 4IX C17 S1 1 4IX C18 S1 1 4IX C19 S1 1 4IX C20 S1 1 4IX C22 S1 1 4IX C29 S1 1 4IX C31 S1 1 4IX C33 S1 1 4IX N13 S1 1 4IX N26 S1 1 4IX N27 S1 1 4IX N28 S1 1 4IX O04 S1 1 4IX O06 S1 1 4IX C33 F1 1 4IX C03 F1 1 4IX O04 F1 1 4IX C05 F1 1 4IX C29 F1 1 4IX C31 F1 1 4IX O06 F1 1 4IX C17 F2 1 4IX C18 F2 1 4IX C19 F2 1 4IX C20 F2 1 4IX C22 F2 1 4IX N26 F2 1 # _pdbe_chem_comp_rdkit_properties.comp_id 4IX _pdbe_chem_comp_rdkit_properties.exactmw 481.217 _pdbe_chem_comp_rdkit_properties.amw 481.506 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 13 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 6 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 18 _pdbe_chem_comp_rdkit_properties.NumHBD 6 _pdbe_chem_comp_rdkit_properties.NumHBA 13 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 34 _pdbe_chem_comp_rdkit_properties.NumAtoms 65 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 0 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.619 _pdbe_chem_comp_rdkit_properties.NumRings 3 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 2 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 3 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 239.523 _pdbe_chem_comp_rdkit_properties.tpsa 195.800 _pdbe_chem_comp_rdkit_properties.CrippenClogP -1.668 _pdbe_chem_comp_rdkit_properties.CrippenMR 114.875 _pdbe_chem_comp_rdkit_properties.chi0v 16.002 _pdbe_chem_comp_rdkit_properties.chi1v 8.261 _pdbe_chem_comp_rdkit_properties.chi2v 3.203 _pdbe_chem_comp_rdkit_properties.chi3v 3.203 _pdbe_chem_comp_rdkit_properties.chi4v 1.828 _pdbe_chem_comp_rdkit_properties.chi0n 47.002 _pdbe_chem_comp_rdkit_properties.chi1n 23.211 _pdbe_chem_comp_rdkit_properties.chi2n 3.203 _pdbe_chem_comp_rdkit_properties.chi3n 3.203 _pdbe_chem_comp_rdkit_properties.chi4n 1.828 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.680 _pdbe_chem_comp_rdkit_properties.kappa1 6.960 _pdbe_chem_comp_rdkit_properties.kappa2 12.690 _pdbe_chem_comp_rdkit_properties.kappa3 6.914 _pdbe_chem_comp_rdkit_properties.Phi 2.598 # _pdbe_chem_comp_external_mappings.comp_id 4IX _pdbe_chem_comp_external_mappings.source UniChem _pdbe_chem_comp_external_mappings.resource PDBe _pdbe_chem_comp_external_mappings.resource_id 4IX # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal 4IX C02 7.291 -0.130 3.301 ETKDGv3 1 4IX C03 6.893 -0.234 1.820 ETKDGv3 2 4IX C05 5.126 0.118 0.336 ETKDGv3 3 4IX C07 2.881 -0.266 0.856 ETKDGv3 4 4IX C08 2.268 -1.231 -0.170 ETKDGv3 5 4IX C09 1.685 -0.532 -1.414 ETKDGv3 6 4IX C10 0.523 0.428 -1.113 ETKDGv3 7 4IX C11 -0.637 -0.274 -0.475 ETKDGv3 8 4IX C12 -1.516 -1.049 -1.090 ETKDGv3 9 4IX C14 -3.716 -2.107 -0.299 ETKDGv3 10 4IX C15 -4.744 -1.002 -0.549 ETKDGv3 11 4IX C16 -6.142 -1.588 -0.770 ETKDGv3 12 4IX C17 -7.136 -0.492 -1.012 ETKDGv3 13 4IX C18 -7.377 0.015 -2.380 ETKDGv3 14 4IX C19 -8.246 1.013 -2.564 ETKDGv3 15 4IX C20 -8.948 1.607 -1.405 ETKDGv3 16 4IX C22 -8.679 1.149 -0.167 ETKDGv3 17 4IX C23 -9.400 1.684 1.008 ETKDGv3 18 4IX C29 6.003 0.872 -0.683 ETKDGv3 19 4IX C31 7.463 0.401 -0.564 ETKDGv3 20 4IX C33 7.922 0.477 0.904 ETKDGv3 21 4IX N13 -2.396 -1.528 -0.087 ETKDGv3 22 4IX N24 -8.878 1.784 2.196 ETKDGv3 23 4IX N26 -7.749 0.060 -0.004 ETKDGv3 24 4IX N27 -1.972 -0.948 1.112 ETKDGv3 25 4IX N28 -0.942 -0.228 0.920 ETKDGv3 26 4IX O01 7.370 1.208 3.714 ETKDGv3 27 4IX O04 5.608 0.342 1.652 ETKDGv3 28 4IX O06 3.805 0.616 0.242 ETKDGv3 29 4IX O21 -9.868 2.636 -1.602 ETKDGv3 30 4IX O25 -7.555 1.535 2.504 ETKDGv3 31 4IX O30 5.543 0.626 -1.987 ETKDGv3 32 4IX O32 8.297 1.211 -1.351 ETKDGv3 33 4IX O34 9.207 -0.077 1.048 ETKDGv3 34 4IX H021 6.554 -0.686 3.926 ETKDGv3 35 4IX H022 8.279 -0.611 3.459 ETKDGv3 36 4IX H031 6.862 -1.321 1.573 ETKDGv3 37 4IX H051 5.152 -0.971 0.078 ETKDGv3 38 4IX H072 3.322 -0.850 1.698 ETKDGv3 39 4IX H071 2.072 0.341 1.313 ETKDGv3 40 4IX H082 1.481 -1.838 0.326 ETKDGv3 41 4IX H081 3.053 -1.942 -0.507 ETKDGv3 42 4IX H091 1.331 -1.312 -2.123 ETKDGv3 43 4IX H092 2.490 0.031 -1.933 ETKDGv3 44 4IX H101 0.183 0.886 -2.067 ETKDGv3 45 4IX H102 0.864 1.259 -0.461 ETKDGv3 46 4IX H121 -1.570 -1.272 -2.147 ETKDGv3 47 4IX H141 -4.004 -2.695 0.600 ETKDGv3 48 4IX H142 -3.679 -2.796 -1.171 ETKDGv3 49 4IX H152 -4.441 -0.418 -1.447 ETKDGv3 50 4IX H151 -4.764 -0.316 0.327 ETKDGv3 51 4IX H161 -6.449 -2.175 0.123 ETKDGv3 52 4IX H162 -6.129 -2.277 -1.643 ETKDGv3 53 4IX H181 -6.859 -0.418 -3.227 ETKDGv3 54 4IX H191 -8.435 1.387 -3.562 ETKDGv3 55 4IX H231 -10.430 1.993 0.881 ETKDGv3 56 4IX H291 5.963 1.966 -0.461 ETKDGv3 57 4IX H311 7.532 -0.660 -0.905 ETKDGv3 58 4IX H331 7.976 1.550 1.194 ETKDGv3 59 4IX H011 6.439 1.512 3.881 ETKDGv3 60 4IX H211 -10.073 2.987 -2.530 ETKDGv3 61 4IX H251 -6.838 1.439 1.798 ETKDGv3 62 4IX H301 4.790 1.252 -2.151 ETKDGv3 63 4IX H321 8.198 0.902 -2.289 ETKDGv3 64 4IX H341 9.148 -1.041 0.817 ETKDGv3 65 #