data_4R3 # _chem_comp.id 4R3 _chem_comp.name "2-[[3,4-bis(chloranyl)-5-methyl-1H-pyrrol-2-yl]carbonylamino]-5-oxidanyl-1,3-benzothiazole-6-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H9 Cl2 N3 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-07 _chem_comp.pdbx_modified_date 2022-07-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 386.210 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4R3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7P2N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4R3 N1 N1 N 0 1 Y N N N N N -18.859 -15.042 6.062 1.140 0.254 0.003 N1 4R3 1 4R3 N3 N2 N 0 1 Y N N N N N -20.998 -9.998 8.445 -3.696 -1.574 -0.005 N3 4R3 2 4R3 C4 C1 C 0 1 Y N N N N N -18.541 -17.327 5.250 3.308 1.464 0.008 C4 4R3 3 4R3 C5 C2 C 0 1 Y N N N N N -19.332 -16.305 5.763 2.483 0.317 0.004 C5 4R3 4 4R3 C6 C3 C 0 1 Y N N N N N -20.705 -16.487 5.948 3.087 -0.948 0.001 C6 4R3 5 4R3 C7 C4 C 0 1 Y N N N N N -19.825 -14.322 6.532 0.589 -0.913 -0.001 C7 4R3 6 4R3 C8 C5 C 0 1 N N N N N N -21.174 -20.075 4.916 6.739 -0.063 0.008 C8 4R3 7 4R3 C10 C6 C 0 1 Y N N N N N -20.088 -10.972 8.122 -3.076 -0.344 -0.001 C10 4R3 8 4R3 C13 C7 C 0 1 Y N N N N N -20.408 -9.023 9.184 -5.039 -1.384 -0.005 C13 4R3 9 4R3 C1 C8 C 0 1 Y N N N N N -21.311 -17.699 5.688 4.468 -1.071 0.002 C1 4R3 10 4R3 C2 C9 C 0 1 Y N N N N N -20.534 -18.745 5.199 5.273 0.067 0.006 C2 4R3 11 4R3 C3 C10 C 0 1 Y N N N N N -19.152 -18.560 4.983 4.676 1.341 0.009 C3 4R3 12 4R3 S1 S1 S 0 1 Y N N N N N -21.421 -15.019 6.575 1.817 -2.170 -0.003 S1 4R3 13 4R3 O1 O1 O 0 1 N N N N N N -22.367 -20.202 5.162 7.307 -1.285 0.005 O1 4R3 14 4R3 O2 O2 O 0 1 N N N N N N -20.491 -20.975 4.297 7.437 0.932 0.011 O2 4R3 15 4R3 O3 O3 O 0 1 N N N N N N -18.390 -19.585 4.546 5.454 2.453 0.013 O3 4R3 16 4R3 N2 N3 N 0 1 N N N N N N -19.580 -13.040 6.958 -0.774 -1.141 -0.002 N2 4R3 17 4R3 C9 C11 C 0 1 N N N N N N -20.546 -12.172 7.370 -1.632 -0.101 -0.000 C9 4R3 18 4R3 O4 O4 O 0 1 N N N N N N -21.734 -12.391 7.176 -1.206 1.039 0.003 O4 4R3 19 4R3 C11 C12 C 0 1 Y N N N N N -18.898 -10.583 8.645 -4.066 0.620 -0.000 C11 4R3 20 4R3 C12 C13 C 0 1 Y N N N N N -19.101 -9.371 9.319 -5.293 -0.053 0.002 C12 4R3 21 4R3 C14 C14 C 0 1 N N N N N N -21.183 -7.850 9.695 -6.079 -2.474 -0.014 C14 4R3 22 4R3 CL1 CL1 CL 0 0 N N N N N N -17.901 -8.457 10.150 -6.864 0.687 0.005 CL1 4R3 23 4R3 CL2 CL2 CL 0 0 N N N N N N -17.383 -11.373 8.561 -3.831 2.340 0.005 CL2 4R3 24 4R3 H1 H1 H 0 1 N N N N N N -21.961 -10.005 8.174 -3.247 -2.434 -0.010 H1 4R3 25 4R3 H2 H2 H 0 1 N N N N N N -17.488 -17.175 5.063 2.859 2.446 0.010 H2 4R3 26 4R3 H3 H3 H 0 1 N N N N N N -22.369 -17.833 5.861 4.920 -2.052 0.000 H3 4R3 27 4R3 H4 H4 H 0 1 N N N N N N -22.672 -21.038 4.830 8.273 -1.320 0.007 H4 4R3 28 4R3 H5 H5 H 0 1 N N N N N N -18.944 -20.331 4.350 5.681 2.777 -0.870 H5 4R3 29 4R3 H6 H6 H 0 1 N N N N N N -18.632 -12.723 6.966 -1.114 -2.050 -0.004 H6 4R3 30 4R3 H7 H7 H 0 1 N N N N N N -21.598 -8.087 10.686 -6.331 -2.744 1.012 H7 4R3 31 4R3 H8 H8 H 0 1 N N N N N N -20.517 -6.978 9.775 -6.973 -2.120 -0.527 H8 4R3 32 4R3 H9 H9 H 0 1 N N N N N N -22.004 -7.622 8.999 -5.685 -3.348 -0.533 H9 4R3 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4R3 O2 C8 DOUB N N 1 4R3 O3 C3 SING N N 2 4R3 C8 O1 SING N N 3 4R3 C8 C2 SING N N 4 4R3 C3 C2 DOUB Y N 5 4R3 C3 C4 SING Y N 6 4R3 C2 C1 SING Y N 7 4R3 C4 C5 DOUB Y N 8 4R3 C1 C6 DOUB Y N 9 4R3 C5 C6 SING Y N 10 4R3 C5 N1 SING Y N 11 4R3 C6 S1 SING Y N 12 4R3 N1 C7 DOUB Y N 13 4R3 C7 S1 SING Y N 14 4R3 C7 N2 SING N N 15 4R3 N2 C9 SING N N 16 4R3 O4 C9 DOUB N N 17 4R3 C9 C10 SING N N 18 4R3 C10 N3 SING Y N 19 4R3 C10 C11 DOUB Y N 20 4R3 N3 C13 SING Y N 21 4R3 CL2 C11 SING N N 22 4R3 C11 C12 SING Y N 23 4R3 C13 C12 DOUB Y N 24 4R3 C13 C14 SING N N 25 4R3 C12 CL1 SING N N 26 4R3 N3 H1 SING N N 27 4R3 C4 H2 SING N N 28 4R3 C1 H3 SING N N 29 4R3 O1 H4 SING N N 30 4R3 O3 H5 SING N N 31 4R3 N2 H6 SING N N 32 4R3 C14 H7 SING N N 33 4R3 C14 H8 SING N N 34 4R3 C14 H9 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4R3 InChI InChI 1.03 InChI=1S/C14H9Cl2N3O4S/c1-4-9(15)10(16)11(17-4)12(21)19-14-18-6-3-7(20)5(13(22)23)2-8(6)24-14/h2-3,17,20H,1H3,(H,22,23)(H,18,19,21) 4R3 InChIKey InChI 1.03 SEAMOYQPPFJZJR-UHFFFAOYSA-N 4R3 SMILES_CANONICAL CACTVS 3.385 Cc1[nH]c(C(=O)Nc2sc3cc(C(O)=O)c(O)cc3n2)c(Cl)c1Cl 4R3 SMILES CACTVS 3.385 Cc1[nH]c(C(=O)Nc2sc3cc(C(O)=O)c(O)cc3n2)c(Cl)c1Cl 4R3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1c(c(c([nH]1)C(=O)Nc2nc3cc(c(cc3s2)C(=O)O)O)Cl)Cl 4R3 SMILES "OpenEye OEToolkits" 2.0.7 Cc1c(c(c([nH]1)C(=O)Nc2nc3cc(c(cc3s2)C(=O)O)O)Cl)Cl # _pdbx_chem_comp_identifier.comp_id 4R3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[[3,4-bis(chloranyl)-5-methyl-1~{H}-pyrrol-2-yl]carbonylamino]-5-oxidanyl-1,3-benzothiazole-6-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4R3 'Create component' 2021-07-07 PDBE 4R3 'Initial release' 2022-07-20 RCSB # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal 4R3 N1 N 9.616 -0.970 1 4R3 N3 N 15.123 0.151 2 4R3 C4 C 6.897 -1.263 3 4R3 C5 C 8.196 -0.513 4 4R3 C6 C 8.196 0.987 5 4R3 C7 C 10.491 0.237 6 4R3 C8 C 4.299 1.737 7 4R3 C10 C 14.241 -1.062 8 4R3 C13 C 16.549 -0.312 9 4R3 C1 C 6.897 1.737 10 4R3 C2 C 5.598 0.987 11 4R3 C3 C 5.598 -0.513 12 4R3 S1 S 9.616 1.444 13 4R3 O1 O 3.000 0.987 14 4R3 O2 O 4.299 3.237 15 4R3 O3 O 4.299 -1.263 16 4R3 N2 N 11.991 0.237 17 4R3 C9 C 12.741 -1.062 18 4R3 O4 O 11.991 -2.361 19 4R3 C11 C 15.123 -2.276 20 4R3 C12 C 16.549 -1.812 21 4R3 C14 C 17.763 0.570 22 4R3 CL1 Cl 17.763 -2.694 23 4R3 CL2 Cl 14.659 -3.702 24 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal 4R3 O2 C8 DOUBLE NONE 1 4R3 O3 C3 SINGLE NONE 2 4R3 C8 O1 SINGLE NONE 3 4R3 C8 C2 SINGLE NONE 4 4R3 C3 C2 DOUBLE NONE 5 4R3 C3 C4 SINGLE NONE 6 4R3 C2 C1 SINGLE NONE 7 4R3 C4 C5 DOUBLE NONE 8 4R3 C1 C6 DOUBLE NONE 9 4R3 C5 C6 SINGLE NONE 10 4R3 C5 N1 SINGLE NONE 11 4R3 C6 S1 SINGLE NONE 12 4R3 N1 C7 DOUBLE NONE 13 4R3 C7 S1 SINGLE NONE 14 4R3 C7 N2 SINGLE NONE 15 4R3 N2 C9 SINGLE NONE 16 4R3 O4 C9 DOUBLE NONE 17 4R3 C9 C10 SINGLE NONE 18 4R3 C10 N3 SINGLE NONE 19 4R3 C10 C11 DOUBLE NONE 20 4R3 N3 C13 SINGLE NONE 21 4R3 CL2 C11 SINGLE NONE 22 4R3 C11 C12 SINGLE NONE 23 4R3 C13 C12 DOUBLE NONE 24 4R3 C13 C14 SINGLE NONE 25 4R3 C12 CL1 SINGLE NONE 26 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys 4R3 MurckoScaffold S1 scaffold 'O=C(Nc1nc2ccccc2s1)c1ccc[nH]1' InChI=1S/C12H9N3OS/c16-11(9-5-3-7-13-9)15-12-14-8-4-1-2-6-10(8)17-12/h1-7,13H,(H,14,15,16) GGERHSDDEORBOE-UHFFFAOYSA-N 4R3 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N 4R3 benzothiazole F2 fragment c1ccc2scnc2c1 InChI=1S/C7H5NS/c1-2-4-7-6(3-1)8-5-9-7/h1-5H IOJUPLGTWVMSFF-UHFFFAOYSA-N 4R3 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N 4R3 pyrrole F4 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N 4R3 thiazole F5 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal 4R3 N1 S1 1 4R3 N3 S1 1 4R3 C4 S1 1 4R3 C5 S1 1 4R3 C6 S1 1 4R3 C7 S1 1 4R3 C10 S1 1 4R3 C13 S1 1 4R3 C1 S1 1 4R3 C2 S1 1 4R3 C3 S1 1 4R3 S1 S1 1 4R3 N2 S1 1 4R3 C9 S1 1 4R3 O4 S1 1 4R3 C11 S1 1 4R3 C12 S1 1 4R3 N2 F1 1 4R3 C9 F1 1 4R3 O4 F1 1 4R3 C10 F1 1 4R3 C6 F2 1 4R3 S1 F2 1 4R3 C7 F2 1 4R3 N1 F2 1 4R3 C5 F2 1 4R3 C4 F2 1 4R3 C3 F2 1 4R3 C2 F2 1 4R3 C1 F2 1 4R3 C4 F3 1 4R3 C3 F3 1 4R3 C2 F3 1 4R3 C1 F3 1 4R3 C6 F3 1 4R3 C5 F3 1 4R3 C10 F4 1 4R3 C11 F4 1 4R3 C12 F4 1 4R3 C13 F4 1 4R3 N3 F4 1 4R3 C6 F5 1 4R3 C5 F5 1 4R3 N1 F5 1 4R3 C7 F5 1 4R3 S1 F5 1 # _pdbe_chem_comp_rdkit_properties.comp_id 4R3 _pdbe_chem_comp_rdkit_properties.exactmw 384.969 _pdbe_chem_comp_rdkit_properties.amw 386.216 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 7 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 4 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5 _pdbe_chem_comp_rdkit_properties.NumHBD 4 _pdbe_chem_comp_rdkit_properties.NumHBA 6 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 24 _pdbe_chem_comp_rdkit_properties.NumAtoms 33 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 1 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.071 _pdbe_chem_comp_rdkit_properties.NumRings 3 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 3 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 161.336 _pdbe_chem_comp_rdkit_properties.tpsa 115.310 _pdbe_chem_comp_rdkit_properties.CrippenClogP 2.460 _pdbe_chem_comp_rdkit_properties.CrippenMR 87.309 _pdbe_chem_comp_rdkit_properties.chi0v 13.467 _pdbe_chem_comp_rdkit_properties.chi1v 7.517 _pdbe_chem_comp_rdkit_properties.chi2v 4.447 _pdbe_chem_comp_rdkit_properties.chi3v 4.447 _pdbe_chem_comp_rdkit_properties.chi4v 2.848 _pdbe_chem_comp_rdkit_properties.chi0n 20.139 _pdbe_chem_comp_rdkit_properties.chi1n 10.155 _pdbe_chem_comp_rdkit_properties.chi2n 2.749 _pdbe_chem_comp_rdkit_properties.chi3n 2.749 _pdbe_chem_comp_rdkit_properties.chi4n 1.710 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.290 _pdbe_chem_comp_rdkit_properties.kappa1 8.703 _pdbe_chem_comp_rdkit_properties.kappa2 5.970 _pdbe_chem_comp_rdkit_properties.kappa3 2.792 _pdbe_chem_comp_rdkit_properties.Phi 2.165 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id 4R3 UniChem ChEMBL CHEMBL4862321 4R3 UniChem PDBe 4R3 4R3 UniChem SureChEMBL SCHEMBL23629060 4R3 UniChem PubChem 151827931 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal 4R3 N1 1.154 -1.186 -0.754 ETKDGv3 1 4R3 N3 -4.605 0.095 1.097 ETKDGv3 2 4R3 C4 3.580 -1.303 -1.095 ETKDGv3 3 4R3 C5 2.499 -0.726 -0.569 ETKDGv3 4 4R3 C6 2.625 0.465 0.250 ETKDGv3 5 4R3 C7 0.280 -0.448 -0.133 ETKDGv3 6 4R3 C8 6.340 0.971 0.354 ETKDGv3 7 4R3 C10 -3.533 -0.036 0.169 ETKDGv3 8 4R3 C13 -5.779 0.139 0.297 ETKDGv3 9 4R3 C1 3.802 1.022 0.526 ETKDGv3 10 4R3 C2 5.036 0.390 -0.028 ETKDGv3 11 4R3 C3 4.920 -0.709 -0.834 ETKDGv3 12 4R3 S1 1.000 0.949 0.758 ETKDGv3 13 4R3 O1 7.444 0.154 0.580 ETKDGv3 14 4R3 O2 6.442 2.213 0.541 ETKDGv3 15 4R3 O3 6.015 -1.298 -1.469 ETKDGv3 16 4R3 N2 -1.125 -0.720 -0.224 ETKDGv3 17 4R3 C9 -2.117 -0.069 0.583 ETKDGv3 18 4R3 O4 -1.800 0.428 1.697 ETKDGv3 19 4R3 C11 -4.008 -0.054 -1.078 ETKDGv3 20 4R3 C12 -5.462 0.062 -0.990 ETKDGv3 21 4R3 C14 -7.156 0.330 0.847 ETKDGv3 22 4R3 CL1 -6.578 0.142 -2.344 ETKDGv3 23 4R3 CL2 -3.087 -0.033 -2.576 ETKDGv3 24 4R3 H1 -4.544 0.164 2.138 ETKDGv3 25 4R3 H2 3.484 -2.185 -1.715 ETKDGv3 26 4R3 H3 3.853 1.903 1.154 ETKDGv3 27 4R3 H4 8.333 0.548 0.864 ETKDGv3 28 4R3 H5 6.932 -0.873 -1.515 ETKDGv3 29 4R3 H6 -1.433 -1.469 -0.883 ETKDGv3 30 4R3 H7 -7.146 0.200 1.949 ETKDGv3 31 4R3 H8 -7.516 1.352 0.606 ETKDGv3 32 4R3 H9 -7.848 -0.419 0.406 ETKDGv3 33 #