data_4RK
#
_chem_comp.id 4RK
_chem_comp.name
(2Z,5Z)-2-[(4-ethylphenyl)imino]-3-methyl-5-[(2-{[4-(1H-tetrazol-5-yl)phenyl]amino}pyridin-4-yl)methylidene]-1,3-thiazolidin-4-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H22 N8 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-05-15
_chem_comp.pdbx_modified_date 2016-07-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 482.560
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 4RK
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4ZTS
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4RK C01 C1 C 0 1 N N N N N N 5.950 -24.253 -13.097 -3.213 5.695 -0.777 C01 4RK 1
4RK C02 C2 C 0 1 N N N N N N 6.865 -24.964 -12.079 -4.310 5.466 0.264 C02 4RK 2
4RK C03 C3 C 0 1 Y N N N N N 6.444 -24.800 -10.602 -4.744 4.023 0.229 C03 4RK 3
4RK C04 C4 C 0 1 Y N N N N N 6.768 -25.856 -9.748 -5.772 3.634 -0.610 C04 4RK 4
4RK C05 C5 C 0 1 Y N N N N N 6.428 -25.785 -8.406 -6.174 2.315 -0.647 C05 4RK 5
4RK C06 C6 C 0 1 Y N N N N N 5.755 -24.669 -7.912 -5.540 1.372 0.165 C06 4RK 6
4RK C07 C7 C 0 1 Y N N N N N 5.436 -23.597 -8.751 -4.502 1.772 1.010 C07 4RK 7
4RK C08 C8 C 0 1 Y N N N N N 5.782 -23.661 -10.099 -4.107 3.094 1.033 C08 4RK 8
4RK N09 N1 N 0 1 N N N N N N 5.479 -24.678 -6.547 -5.933 0.061 0.133 N09 4RK 9
4RK C10 C9 C 0 1 N N N N N N 4.593 -25.471 -5.981 -5.033 -0.894 0.084 C10 4RK 10
4RK S11 S1 S 0 1 N N N N N N 3.556 -26.569 -6.641 -3.273 -0.687 0.061 S11 4RK 11
4RK C12 C10 C 0 1 N N N N N N 2.750 -27.170 -5.420 -2.921 -2.425 -0.004 C12 4RK 12
4RK C13 C11 C 0 1 N N N N N N 1.732 -28.112 -5.322 -1.706 -3.024 -0.045 C13 4RK 13
4RK C14 C12 C 0 1 Y N N N N N 1.224 -29.046 -6.381 -0.490 -2.212 -0.207 C14 4RK 14
4RK C15 C13 C 0 1 Y N N N N N 0.581 -30.217 -5.931 0.768 -2.727 0.126 C15 4RK 15
4RK C16 C14 C 0 1 Y N N N N N 0.065 -31.136 -6.849 1.888 -1.924 -0.045 C16 4RK 16
4RK N17 N2 N 0 1 N N N N N N -0.580 -32.353 -6.489 3.146 -2.420 0.282 N17 4RK 17
4RK C18 C15 C 0 1 Y N N N N N -0.943 -32.795 -5.180 4.262 -1.584 0.224 C18 4RK 18
4RK C19 C16 C 0 1 Y N N N N N -0.218 -32.563 -4.037 4.134 -0.234 0.531 C19 4RK 19
4RK C20 C17 C 0 1 Y N N N N N -0.648 -33.060 -2.809 5.234 0.594 0.474 C20 4RK 20
4RK C21 C18 C 0 1 Y N N N N N -1.825 -33.810 -2.724 6.478 0.075 0.109 C21 4RK 21
4RK C22 C19 C 0 1 Y N N N N N -2.542 -34.057 -3.868 6.603 -1.280 -0.199 C22 4RK 22
4RK C23 C20 C 0 1 Y N N N N N -2.114 -33.568 -5.085 5.501 -2.105 -0.135 C23 4RK 23
4RK C24 C21 C 0 1 Y N N N N N -2.305 -34.365 -1.381 7.660 0.961 0.046 C24 4RK 24
4RK N25 N3 N 0 1 Y N N N N N -1.661 -34.256 -0.209 8.922 0.600 -0.296 N25 4RK 25
4RK N26 N4 N 0 1 Y N N N N N -2.377 -34.873 0.741 9.681 1.780 -0.207 N26 4RK 26
4RK N27 N5 N 0 1 Y N N N N N -3.474 -35.372 0.164 8.875 2.716 0.161 N27 4RK 27
4RK N28 N6 N 0 1 Y N N N N N -3.431 -35.064 -1.152 7.687 2.252 0.308 N28 4RK 28
4RK N29 N7 N 0 1 Y N N N N N 0.188 -30.877 -8.154 1.772 -0.691 -0.515 N29 4RK 29
4RK C30 C22 C 0 1 Y N N N N N 0.772 -29.787 -8.637 0.602 -0.172 -0.839 C30 4RK 30
4RK C31 C23 C 0 1 Y N N N N N 1.307 -28.828 -7.782 -0.559 -0.901 -0.706 C31 4RK 31
4RK C32 C24 C 0 1 N N N N N N 3.252 -26.487 -4.132 -4.243 -3.069 -0.002 C32 4RK 32
4RK O33 O1 O 0 1 N N N N N N 2.852 -26.705 -3.004 -4.380 -4.277 -0.041 O33 4RK 33
4RK N34 N8 N 0 1 N N N N N N 4.406 -25.433 -4.508 -5.273 -2.240 0.049 N34 4RK 34
4RK C35 C25 C 0 1 N N N N N N 5.128 -24.601 -3.582 -6.644 -2.754 0.062 C35 4RK 35
4RK H1 H1 H 0 1 N N N N N N 6.329 -24.427 -14.115 -2.361 5.054 -0.553 H1 4RK 36
4RK H2 H2 H 0 1 N N N N N N 4.928 -24.652 -13.013 -3.598 5.455 -1.769 H2 4RK 37
4RK H3 H3 H 0 1 N N N N N N 5.940 -23.173 -12.889 -2.900 6.738 -0.752 H3 4RK 38
4RK H4 H4 H 0 1 N N N N N N 6.870 -26.038 -12.316 -3.926 5.706 1.256 H4 4RK 39
4RK H5 H5 H 0 1 N N N N N N 7.881 -24.559 -12.192 -5.163 6.107 0.041 H5 4RK 40
4RK H6 H6 H 0 1 N N N N N N 7.282 -26.725 -10.132 -6.262 4.364 -1.237 H6 4RK 41
4RK H7 H7 H 0 1 N N N N N N 6.685 -26.597 -7.742 -6.977 2.012 -1.303 H7 4RK 42
4RK H8 H8 H 0 1 N N N N N N 4.927 -22.729 -8.358 -4.007 1.048 1.640 H8 4RK 43
4RK H9 H9 H 0 1 N N N N N N 5.544 -22.839 -10.758 -3.303 3.404 1.683 H9 4RK 44
4RK H10 H10 H 0 1 N N N N N N 1.244 -28.180 -4.361 -1.631 -4.098 0.041 H10 4RK 45
4RK H11 H11 H 0 1 N N N N N N 0.487 -30.405 -4.872 0.867 -3.732 0.509 H11 4RK 46
4RK H12 H12 H 0 1 N N N N N N -0.806 -32.972 -7.242 3.248 -3.347 0.549 H12 4RK 47
4RK H13 H13 H 0 1 N N N N N N 0.695 -31.989 -4.091 3.172 0.166 0.814 H13 4RK 48
4RK H14 H14 H 0 1 N N N N N N -0.069 -32.865 -1.918 5.135 1.642 0.712 H14 4RK 49
4RK H15 H15 H 0 1 N N N N N N -3.450 -34.640 -3.815 7.564 -1.684 -0.482 H15 4RK 50
4RK H16 H16 H 0 1 N N N N N N -2.686 -33.782 -5.976 5.598 -3.155 -0.368 H16 4RK 51
4RK H17 H17 H 0 1 N N N N N N -0.788 -33.790 -0.067 9.234 -0.283 -0.548 H17 4RK 52
4RK H18 H18 H 0 1 N N N N N N 0.833 -29.643 -9.706 0.555 0.837 -1.219 H18 4RK 53
4RK H19 H19 H 0 1 N N N N N N 1.775 -27.938 -8.175 -1.511 -0.468 -0.975 H19 4RK 54
4RK H20 H20 H 0 1 N N N N N N 4.771 -24.794 -2.560 -7.006 -2.850 -0.962 H20 4RK 55
4RK H21 H21 H 0 1 N N N N N N 6.202 -24.830 -3.644 -6.662 -3.730 0.546 H21 4RK 56
4RK H22 H22 H 0 1 N N N N N N 4.963 -23.543 -3.835 -7.286 -2.064 0.610 H22 4RK 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4RK C01 C02 SING N N 1
4RK C02 C03 SING N N 2
4RK C03 C08 DOUB Y N 3
4RK C03 C04 SING Y N 4
4RK C08 C07 SING Y N 5
4RK C04 C05 DOUB Y N 6
4RK C07 C06 DOUB Y N 7
4RK C30 N29 DOUB Y N 8
4RK C30 C31 SING Y N 9
4RK C05 C06 SING Y N 10
4RK N29 C16 SING Y N 11
4RK C06 N09 SING N N 12
4RK C31 C14 DOUB Y N 13
4RK C16 N17 SING N N 14
4RK C16 C15 DOUB Y N 15
4RK S11 C10 SING N N 16
4RK S11 C12 SING N N 17
4RK N09 C10 DOUB N N 18
4RK N17 C18 SING N N 19
4RK C14 C15 SING Y N 20
4RK C14 C13 SING N N 21
4RK C10 N34 SING N N 22
4RK C12 C13 DOUB N Z 23
4RK C12 C32 SING N N 24
4RK C18 C23 DOUB Y N 25
4RK C18 C19 SING Y N 26
4RK C23 C22 SING Y N 27
4RK N34 C32 SING N N 28
4RK N34 C35 SING N N 29
4RK C32 O33 DOUB N N 30
4RK C19 C20 DOUB Y N 31
4RK C22 C21 DOUB Y N 32
4RK C20 C21 SING Y N 33
4RK C21 C24 SING N N 34
4RK C24 N28 DOUB Y N 35
4RK C24 N25 SING Y N 36
4RK N28 N27 SING Y N 37
4RK N25 N26 SING Y N 38
4RK N27 N26 DOUB Y N 39
4RK C01 H1 SING N N 40
4RK C01 H2 SING N N 41
4RK C01 H3 SING N N 42
4RK C02 H4 SING N N 43
4RK C02 H5 SING N N 44
4RK C04 H6 SING N N 45
4RK C05 H7 SING N N 46
4RK C07 H8 SING N N 47
4RK C08 H9 SING N N 48
4RK C13 H10 SING N N 49
4RK C15 H11 SING N N 50
4RK N17 H12 SING N N 51
4RK C19 H13 SING N N 52
4RK C20 H14 SING N N 53
4RK C22 H15 SING N N 54
4RK C23 H16 SING N N 55
4RK N25 H17 SING N N 56
4RK C30 H18 SING N N 57
4RK C31 H19 SING N N 58
4RK C35 H20 SING N N 59
4RK C35 H21 SING N N 60
4RK C35 H22 SING N N 61
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4RK SMILES ACDLabs 12.01 CCc1ccc(cc1)\N=C2\N(C(C(S2)=[C@H]c5cc(Nc3ccc(cc3)c4nnnn4)ncc5)=O)C
4RK InChI InChI 1.03 InChI=1S/C25H22N8OS/c1-3-16-4-8-20(9-5-16)28-25-33(2)24(34)21(35-25)14-17-12-13-26-22(15-17)27-19-10-6-18(7-11-19)23-29-31-32-30-23/h4-15H,3H2,1-2H3,(H,26,27)(H,29,30,31,32)/b21-14-,28-25-
4RK InChIKey InChI 1.03 WWPZBBQLQAEXGE-ZMSDRGEISA-N
4RK SMILES_CANONICAL CACTVS 3.385 CCc1ccc(cc1)N=C2S\C(=C/c3ccnc(Nc4ccc(cc4)c5[nH]nnn5)c3)C(=O)N2C
4RK SMILES CACTVS 3.385 CCc1ccc(cc1)N=C2SC(=Cc3ccnc(Nc4ccc(cc4)c5[nH]nnn5)c3)C(=O)N2C
4RK SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 CCc1ccc(cc1)/N=C\2/N(C(=O)/C(=C/c3ccnc(c3)Nc4ccc(cc4)c5[nH]nnn5)/S2)C
4RK SMILES "OpenEye OEToolkits" 1.9.2 CCc1ccc(cc1)N=C2N(C(=O)C(=Cc3ccnc(c3)Nc4ccc(cc4)c5[nH]nnn5)S2)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4RK "SYSTEMATIC NAME" ACDLabs 12.01 (2Z,5Z)-2-[(4-ethylphenyl)imino]-3-methyl-5-[(2-{[4-(1H-tetrazol-5-yl)phenyl]amino}pyridin-4-yl)methylidene]-1,3-thiazolidin-4-one
4RK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 (2Z,5Z)-2-(4-ethylphenyl)imino-3-methyl-5-[[2-[[4-(1H-1,2,3,4-tetrazol-5-yl)phenyl]amino]pyridin-4-yl]methylidene]-1,3-thiazolidin-4-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4RK 'Create component' 2015-05-15 EBI
4RK 'Initial release' 2016-07-20 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
4RK C01 C 3.199 -7.177 1
4RK C02 C 2.587 -5.807 2
4RK C03 C 3.467 -4.593 3
4RK C04 C 2.856 -3.223 4
4RK C05 C 3.736 -2.009 5
4RK C06 C 5.228 -2.164 6
4RK C07 C 5.840 -3.533 7
4RK C08 C 4.959 -4.748 8
4RK N09 N 6.108 -0.950 9
4RK C10 C 5.497 0.420 10
4RK S11 S 4.029 0.730 11
4RK C12 C 3.871 2.222 12
4RK C13 C 2.571 2.971 13
4RK C14 C 1.273 2.219 14
4RK C15 C -0.027 2.967 15
4RK C16 C -1.326 2.216 16
4RK N17 N -2.626 2.964 17
4RK C18 C -3.923 2.213 18
4RK C19 C -5.223 2.961 19
4RK C20 C -6.522 2.210 20
4RK C21 C -6.520 0.710 21
4RK C22 C -5.220 -0.039 22
4RK C23 C -3.922 0.713 23
4RK C24 C -7.818 -0.042 24
4RK N25 N -9.189 0.566 25
4RK N26 N -10.191 -0.549 26
4RK N27 N -9.440 -1.847 27
4RK N28 N -7.973 -1.534 28
4RK N29 N -1.324 0.716 29
4RK C30 C -0.024 -0.033 30
4RK C31 C 1.274 0.719 31
4RK C32 C 5.240 2.833 32
4RK O33 O 5.551 4.301 33
4RK N34 N 6.245 1.720 34
4RK C35 C 7.737 1.879 35
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
4RK C01 C02 SINGLE NONE 1
4RK C02 C03 SINGLE NONE 2
4RK C03 C08 DOUBLE NONE 3
4RK C03 C04 SINGLE NONE 4
4RK C08 C07 SINGLE NONE 5
4RK C04 C05 DOUBLE NONE 6
4RK C07 C06 DOUBLE NONE 7
4RK C30 N29 DOUBLE NONE 8
4RK C30 C31 SINGLE NONE 9
4RK C05 C06 SINGLE NONE 10
4RK N29 C16 SINGLE NONE 11
4RK C06 N09 SINGLE ENDUPRIGHT 12
4RK C31 C14 DOUBLE NONE 13
4RK C16 N17 SINGLE NONE 14
4RK C16 C15 DOUBLE NONE 15
4RK S11 C10 SINGLE ENDUPRIGHT 16
4RK S11 C12 SINGLE ENDUPRIGHT 17
4RK N09 C10 DOUBLE NONE 18
4RK N17 C18 SINGLE NONE 19
4RK C14 C15 SINGLE NONE 20
4RK C14 C13 SINGLE ENDUPRIGHT 21
4RK C10 N34 SINGLE ENDUPRIGHT 22
4RK C12 C13 DOUBLE NONE 23
4RK C12 C32 SINGLE ENDUPRIGHT 24
4RK C18 C23 SINGLE NONE 25
4RK C18 C19 DOUBLE NONE 26
4RK C23 C22 DOUBLE NONE 27
4RK N34 C32 SINGLE NONE 28
4RK N34 C35 SINGLE NONE 29
4RK C32 O33 DOUBLE NONE 30
4RK C19 C20 SINGLE NONE 31
4RK C22 C21 SINGLE NONE 32
4RK C20 C21 DOUBLE NONE 33
4RK C21 C24 SINGLE NONE 34
4RK C24 N28 DOUBLE NONE 35
4RK C24 N25 SINGLE NONE 36
4RK N28 N27 SINGLE NONE 37
4RK N25 N26 SINGLE NONE 38
4RK N27 N26 DOUBLE NONE 39
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
4RK MurckoScaffold S1 scaffold 'O=C1N/C(=N/c2ccccc2)S/C1=C\c1ccnc(Nc2ccc(-c3nnn[nH]3)cc2)c1' InChI=1S/C22H16N8OS/c31-21-18(32-22(26-21)25-16-4-2-1-3-5-16)12-14-10-11-23-19(13-14)24-17-8-6-15(7-9-17)20-27-29-30-28-20/h1-13H,(H,23,24)(H,25,26,31)(H,27,28,29,30)/b18-12- MPKNTCSFQZMNMD-PDGQHHTCSA-N
4RK amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
4RK phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
4RK pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
4RK C03 S1 1
4RK C04 S1 1
4RK C05 S1 1
4RK C06 S1 1
4RK C07 S1 1
4RK C08 S1 1
4RK N09 S1 1
4RK C10 S1 1
4RK S11 S1 1
4RK C12 S1 1
4RK C13 S1 1
4RK C14 S1 1
4RK C15 S1 1
4RK C16 S1 1
4RK N17 S1 1
4RK C18 S1 1
4RK C19 S1 1
4RK C20 S1 1
4RK C21 S1 1
4RK C22 S1 1
4RK C23 S1 1
4RK C24 S1 1
4RK N25 S1 1
4RK N26 S1 1
4RK N27 S1 1
4RK N28 S1 1
4RK N29 S1 1
4RK C30 S1 1
4RK C31 S1 1
4RK C32 S1 1
4RK O33 S1 1
4RK N34 S1 1
4RK N34 F1 1
4RK C32 F1 1
4RK O33 F1 1
4RK C12 F1 1
4RK C03 F2 1
4RK C08 F2 1
4RK C07 F2 1
4RK C06 F2 1
4RK C05 F2 1
4RK C04 F2 1
4RK C18 F2 2
4RK C23 F2 2
4RK C22 F2 2
4RK C21 F2 2
4RK C20 F2 2
4RK C19 F2 2
4RK C16 F3 1
4RK C15 F3 1
4RK C14 F3 1
4RK C31 F3 1
4RK C30 F3 1
4RK N29 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 4RK
_pdbe_chem_comp_rdkit_properties.exactmw 482.164
_pdbe_chem_comp_rdkit_properties.amw 482.573
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 35
_pdbe_chem_comp_rdkit_properties.NumAtoms 57
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.120
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 236.970
_pdbe_chem_comp_rdkit_properties.tpsa 112.050
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.170
_pdbe_chem_comp_rdkit_properties.CrippenMR 134.060
_pdbe_chem_comp_rdkit_properties.chi0v 17.711
_pdbe_chem_comp_rdkit_properties.chi1v 9.989
_pdbe_chem_comp_rdkit_properties.chi2v 4.854
_pdbe_chem_comp_rdkit_properties.chi3v 4.854
_pdbe_chem_comp_rdkit_properties.chi4v 3.227
_pdbe_chem_comp_rdkit_properties.chi0n 38.894
_pdbe_chem_comp_rdkit_properties.chi1n 20.066
_pdbe_chem_comp_rdkit_properties.chi2n 3.916
_pdbe_chem_comp_rdkit_properties.chi3n 3.916
_pdbe_chem_comp_rdkit_properties.chi4n 2.402
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.310
_pdbe_chem_comp_rdkit_properties.kappa1 8.418
_pdbe_chem_comp_rdkit_properties.kappa2 9.898
_pdbe_chem_comp_rdkit_properties.kappa3 5.118
_pdbe_chem_comp_rdkit_properties.Phi 2.381
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
4RK UniChem ChEMBL CHEMBL3903187
4RK UniChem PDBe 4RK
4RK UniChem ZINC ZINC000584905056
4RK UniChem BindingDb 50198044
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
4RK C01 -7.370 -2.080 3.403 ETKDGv3 1
4RK C02 -6.400 -2.611 2.354 ETKDGv3 2
4RK C03 -5.973 -1.513 1.418 ETKDGv3 3
4RK C04 -6.775 -1.224 0.204 ETKDGv3 4
4RK C05 -6.420 -0.231 -0.619 ETKDGv3 5
4RK C06 -5.218 0.584 -0.335 ETKDGv3 6
4RK C07 -4.519 0.355 0.792 ETKDGv3 7
4RK C08 -4.907 -0.745 1.700 ETKDGv3 8
4RK N09 -4.899 1.675 -1.210 ETKDGv3 9
4RK C10 -3.717 1.979 -1.664 ETKDGv3 10
4RK S11 -2.247 0.962 -1.400 ETKDGv3 11
4RK C12 -1.296 2.192 -2.312 ETKDGv3 12
4RK C13 0.045 2.218 -2.389 ETKDGv3 13
4RK C14 0.930 1.174 -1.833 ETKDGv3 14
4RK C15 2.141 1.588 -1.088 ETKDGv3 15
4RK C16 2.991 0.658 -0.621 ETKDGv3 16
4RK N17 4.147 1.055 0.136 ETKDGv3 17
4RK C18 5.237 0.175 0.456 ETKDGv3 18
4RK C19 5.687 -0.738 -0.424 ETKDGv3 19
4RK C20 6.832 -1.607 -0.081 ETKDGv3 20
4RK C21 7.454 -1.483 1.107 ETKDGv3 21
4RK C22 6.973 -0.454 2.064 ETKDGv3 22
4RK C23 5.933 0.329 1.753 ETKDGv3 23
4RK C24 8.602 -2.353 1.454 ETKDGv3 24
4RK N25 9.326 -2.316 2.674 ETKDGv3 25
4RK N26 10.290 -3.311 2.516 ETKDGv3 26
4RK N27 10.152 -3.852 1.374 ETKDGv3 27
4RK N28 9.087 -3.265 0.675 ETKDGv3 28
4RK N29 2.706 -0.737 -0.843 ETKDGv3 29
4RK C30 1.659 -1.127 -1.510 ETKDGv3 30
4RK C31 0.718 -0.134 -2.057 ETKDGv3 31
4RK C32 -2.146 3.259 -2.835 ETKDGv3 32
4RK O33 -1.709 4.234 -3.505 ETKDGv3 33
4RK N34 -3.520 3.116 -2.505 ETKDGv3 34
4RK C35 -4.528 4.146 -2.748 ETKDGv3 35
4RK H1 -6.885 -1.286 4.010 ETKDGv3 36
4RK H2 -7.677 -2.906 4.078 ETKDGv3 37
4RK H3 -8.277 -1.664 2.914 ETKDGv3 38
4RK H4 -6.893 -3.425 1.779 ETKDGv3 39
4RK H5 -5.515 -3.054 2.861 ETKDGv3 40
4RK H6 -7.656 -1.814 -0.017 ETKDGv3 41
4RK H7 -7.012 -0.025 -1.501 ETKDGv3 42
4RK H8 -3.683 0.986 1.064 ETKDGv3 43
4RK H9 -4.325 -0.915 2.598 ETKDGv3 44
4RK H10 0.526 3.082 -2.831 ETKDGv3 45
4RK H11 2.334 2.640 -0.918 ETKDGv3 46
4RK H12 4.156 2.009 0.564 ETKDGv3 47
4RK H13 5.241 -0.833 -1.405 ETKDGv3 48
4RK H14 7.157 -2.340 -0.808 ETKDGv3 49
4RK H15 7.457 -0.320 3.022 ETKDGv3 50
4RK H16 5.594 1.076 2.460 ETKDGv3 51
4RK H17 9.203 -1.712 3.516 ETKDGv3 52
4RK H18 1.482 -2.183 -1.664 ETKDGv3 53
4RK H19 -0.120 -0.474 -2.653 ETKDGv3 54
4RK H20 -5.532 3.684 -2.853 ETKDGv3 55
4RK H21 -4.540 4.862 -1.900 ETKDGv3 56
4RK H22 -4.302 4.694 -3.687 ETKDGv3 57
#