data_4TK
#
_chem_comp.id 4TK
_chem_comp.name N-[(1R)-1-(4-bromophenyl)-2-(hydroxyamino)-2-oxoethyl]-2,2-dimethylpropanamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H17 Br N2 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-05-22
_chem_comp.pdbx_modified_date 2016-03-25
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 329.190
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 4TK
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4ZX3
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4TK CA C1 C 0 1 N N R N N N 89.069 120.193 12.288 1.271 0.665 0.548 CA 4TK 1
4TK N N1 N 0 1 N N N N N N 89.673 118.938 11.808 2.086 -0.417 -0.009 N 4TK 2
4TK CAO C2 C 0 1 N N N N N N 90.975 118.903 11.488 3.343 -0.612 0.438 CAO 4TK 3
4TK OAE O1 O 0 1 N N N N N N 91.727 119.864 11.634 3.798 0.108 1.301 OAE 4TK 4
4TK CAS C3 C 0 1 N N N N N N 91.492 117.587 10.896 4.181 -1.725 -0.136 CAS 4TK 5
4TK CAA C4 C 0 1 N N N N N N 92.998 117.460 11.135 5.555 -1.728 0.539 CAA 4TK 6
4TK CAB C5 C 0 1 N N N N N N 90.757 116.396 11.514 3.488 -3.066 0.112 CAB 4TK 7
4TK CAC C6 C 0 1 N N N N N N 91.239 117.615 9.385 4.354 -1.511 -1.641 CAC 4TK 8
4TK C C7 C 0 1 N N N N N N 88.051 120.624 11.231 1.575 1.950 -0.180 C 4TK 9
4TK O O2 O 0 1 N N N N N N 87.081 119.918 10.957 2.393 1.960 -1.076 O 4TK 10
4TK NAL N2 N 0 1 N N N N N N 88.345 121.779 10.620 0.939 3.086 0.165 NAL 4TK 11
4TK OAF O3 O 0 1 N N N N N N 87.450 122.241 9.614 1.224 4.293 -0.519 OAF 4TK 12
4TK BRG BR1 BR 0 0 N N N N N N 86.459 120.288 17.792 -4.700 -0.708 -0.121 BRAG 4TK 13
4TK CAQ C8 C 0 1 Y N N N N N 88.480 120.145 13.560 -0.189 0.329 0.384 CAQ 4TK 14
4TK CAJ C9 C 0 1 Y N N N N N 87.805 121.280 13.996 -1.082 0.616 1.400 CAJ 4TK 15
4TK CAH C10 C 0 1 Y N N N N N 87.205 121.317 15.249 -2.421 0.308 1.250 CAH 4TK 16
4TK CAP C11 C 0 1 Y N N N N N 87.283 120.211 16.085 -2.868 -0.287 0.084 CAP 4TK 17
4TK CAI C12 C 0 1 Y N N N N N 87.964 119.071 15.658 -1.974 -0.573 -0.932 CAI 4TK 18
4TK CAK C13 C 0 1 Y N N N N N 88.566 119.035 14.397 -0.636 -0.260 -0.783 CAK 4TK 19
4TK H1 H1 H 0 1 N N N N N N 89.860 120.958 12.300 1.500 0.785 1.607 H1 4TK 20
4TK H2 H2 H 0 1 N N N N N N 89.113 118.114 11.721 1.722 -0.992 -0.700 H2 4TK 21
4TK H3 H3 H 0 1 N N N N N N 93.198 117.438 12.217 5.432 -1.881 1.612 H3 4TK 22
4TK H4 H4 H 0 1 N N N N N N 93.365 116.530 10.676 6.161 -2.533 0.125 H4 4TK 23
4TK H5 H5 H 0 1 N N N N N N 93.515 118.320 10.684 6.049 -0.773 0.363 H5 4TK 24
4TK H6 H6 H 0 1 N N N N N N 90.938 116.375 12.599 3.365 -3.219 1.185 H6 4TK 25
4TK H7 H7 H 0 1 N N N N N N 89.678 116.493 11.324 2.510 -3.064 -0.368 H7 4TK 26
4TK H8 H8 H 0 1 N N N N N N 91.126 115.463 11.063 4.095 -3.871 -0.302 H8 4TK 27
4TK H9 H9 H 0 1 N N N N N N 90.159 117.706 9.195 4.960 -2.316 -2.055 H9 4TK 28
4TK H10 H10 H 0 1 N N N N N N 91.763 118.474 8.941 3.376 -1.508 -2.122 H10 4TK 29
4TK H11 H11 H 0 1 N N N N N N 91.613 116.684 8.933 4.848 -0.555 -1.817 H11 4TK 30
4TK H12 H12 H 0 1 N N N N N N 89.164 122.299 10.862 0.285 3.078 0.881 H12 4TK 31
4TK H13 H13 H 0 1 N N N N N N 86.741 121.617 9.509 0.719 5.054 -0.202 H13 4TK 32
4TK H14 H14 H 0 1 N N N N N N 87.746 122.145 13.352 -0.733 1.080 2.311 H14 4TK 33
4TK H15 H15 H 0 1 N N N N N N 86.679 122.204 15.572 -3.119 0.532 2.044 H15 4TK 34
4TK H16 H16 H 0 1 N N N N N N 88.027 118.210 16.307 -2.322 -1.038 -1.842 H16 4TK 35
4TK H17 H17 H 0 1 N N N N N N 89.095 118.151 14.073 0.061 -0.481 -1.578 H17 4TK 36
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4TK CAC CAS SING N N 1
4TK OAF NAL SING N N 2
4TK NAL C SING N N 3
4TK CAS CAA SING N N 4
4TK CAS CAO SING N N 5
4TK CAS CAB SING N N 6
4TK O C DOUB N N 7
4TK C CA SING N N 8
4TK CAO OAE DOUB N N 9
4TK CAO N SING N N 10
4TK N CA SING N N 11
4TK CA CAQ SING N N 12
4TK CAQ CAJ DOUB Y N 13
4TK CAQ CAK SING Y N 14
4TK CAJ CAH SING Y N 15
4TK CAK CAI DOUB Y N 16
4TK CAH CAP DOUB Y N 17
4TK CAI CAP SING Y N 18
4TK CAP BRG SING N N 19
4TK CA H1 SING N N 20
4TK N H2 SING N N 21
4TK CAA H3 SING N N 22
4TK CAA H4 SING N N 23
4TK CAA H5 SING N N 24
4TK CAB H6 SING N N 25
4TK CAB H7 SING N N 26
4TK CAB H8 SING N N 27
4TK CAC H9 SING N N 28
4TK CAC H10 SING N N 29
4TK CAC H11 SING N N 30
4TK NAL H12 SING N N 31
4TK OAF H13 SING N N 32
4TK CAJ H14 SING N N 33
4TK CAH H15 SING N N 34
4TK CAI H16 SING N N 35
4TK CAK H17 SING N N 36
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4TK SMILES ACDLabs 12.01 C(c1ccc(Br)cc1)(NC(=O)C(C)(C)C)C(=O)NO
4TK InChI InChI 1.03 InChI=1S/C13H17BrN2O3/c1-13(2,3)12(18)15-10(11(17)16-19)8-4-6-9(14)7-5-8/h4-7,10,19H,1-3H3,(H,15,18)(H,16,17)/t10-/m1/s1
4TK InChIKey InChI 1.03 QSMFBPVNXFNEGF-SNVBAGLBSA-N
4TK SMILES_CANONICAL CACTVS 3.385 CC(C)(C)C(=O)N[C@@H](C(=O)NO)c1ccc(Br)cc1
4TK SMILES CACTVS 3.385 CC(C)(C)C(=O)N[CH](C(=O)NO)c1ccc(Br)cc1
4TK SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 CC(C)(C)C(=O)N[C@H](c1ccc(cc1)Br)C(=O)NO
4TK SMILES "OpenEye OEToolkits" 1.9.2 CC(C)(C)C(=O)NC(c1ccc(cc1)Br)C(=O)NO
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4TK "SYSTEMATIC NAME" ACDLabs 12.01 N-[(1R)-1-(4-bromophenyl)-2-(hydroxyamino)-2-oxoethyl]-2,2-dimethylpropanamide
4TK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 N-[(1R)-1-(4-bromophenyl)-2-(oxidanylamino)-2-oxidanylidene-ethyl]-2,2-dimethyl-propanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4TK 'Create component' 2015-05-22 RCSB
4TK 'Initial release' 2016-03-30 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
4TK CA C 7.702 0.851 1
4TK N N 9.002 1.601 2
4TK CAO C 9.002 3.100 3
4TK OAE O 7.702 3.850 4
4TK CAS C 10.301 3.850 5
4TK CAA C 9.551 5.149 6
4TK CAB C 11.051 2.551 7
4TK CAC C 11.600 4.601 8
4TK C C 6.404 1.601 9
4TK O O 6.404 3.100 10
4TK NAL N 5.104 0.851 11
4TK OAF O 3.805 1.601 12
4TK BRG Br 7.702 -5.149 13
4TK CAQ C 7.702 -0.649 14
4TK CAJ C 6.404 -1.399 15
4TK CAH C 6.404 -2.900 16
4TK CAP C 7.702 -3.650 17
4TK CAI C 9.002 -2.900 18
4TK CAK C 9.002 -1.399 19
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
4TK CAC CAS SINGLE NONE 1
4TK OAF NAL SINGLE NONE 2
4TK NAL C SINGLE NONE 3
4TK CAS CAA SINGLE NONE 4
4TK CAS CAO SINGLE NONE 5
4TK CAS CAB SINGLE NONE 6
4TK O C DOUBLE NONE 7
4TK C CA SINGLE NONE 8
4TK CAO OAE DOUBLE NONE 9
4TK CAO N SINGLE NONE 10
4TK CA N SINGLE BEGINDASH 11
4TK CA CAQ SINGLE NONE 12
4TK CAQ CAJ DOUBLE NONE 13
4TK CAQ CAK SINGLE NONE 14
4TK CAJ CAH SINGLE NONE 15
4TK CAK CAI DOUBLE NONE 16
4TK CAH CAP DOUBLE NONE 17
4TK CAI CAP SINGLE NONE 18
4TK CAP BRG SINGLE NONE 19
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
4TK MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
4TK amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
4TK peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
4TK phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
4TK CAQ S1 1
4TK CAJ S1 1
4TK CAH S1 1
4TK CAP S1 1
4TK CAI S1 1
4TK CAK S1 1
4TK N F1 1
4TK CAO F1 1
4TK OAE F1 1
4TK CAS F1 1
4TK NAL F1 2
4TK C F1 2
4TK O F1 2
4TK CA F1 2
4TK O F2 1
4TK C F2 1
4TK CA F2 1
4TK N F2 1
4TK CAQ F3 1
4TK CAJ F3 1
4TK CAH F3 1
4TK CAP F3 1
4TK CAI F3 1
4TK CAK F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 4TK
_pdbe_chem_comp_rdkit_properties.exactmw 328.042
_pdbe_chem_comp_rdkit_properties.amw 329.194
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 19
_pdbe_chem_comp_rdkit_properties.NumAtoms 36
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.385
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 144.112
_pdbe_chem_comp_rdkit_properties.tpsa 78.430
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.103
_pdbe_chem_comp_rdkit_properties.CrippenMR 74.144
_pdbe_chem_comp_rdkit_properties.chi0v 10.583
_pdbe_chem_comp_rdkit_properties.chi1v 5.244
_pdbe_chem_comp_rdkit_properties.chi2v 2.047
_pdbe_chem_comp_rdkit_properties.chi3v 2.047
_pdbe_chem_comp_rdkit_properties.chi4v 1.053
_pdbe_chem_comp_rdkit_properties.chi0n 25.997
_pdbe_chem_comp_rdkit_properties.chi1n 12.753
_pdbe_chem_comp_rdkit_properties.chi2n 1.651
_pdbe_chem_comp_rdkit_properties.chi3n 1.651
_pdbe_chem_comp_rdkit_properties.chi4n 0.855
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.400
_pdbe_chem_comp_rdkit_properties.kappa1 4.051
_pdbe_chem_comp_rdkit_properties.kappa2 6.164
_pdbe_chem_comp_rdkit_properties.kappa3 4.326
_pdbe_chem_comp_rdkit_properties.Phi 1.314
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
4TK UniChem PDBe 4TK
4TK UniChem ZINC ZINC000584905022
4TK UniChem PubChem 118797857
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
4TK CA 0.262 -0.995 1.038 ETKDGv3 1
4TK N -0.739 -0.666 0.016 ETKDGv3 2
4TK CAO -1.387 0.618 -0.023 ETKDGv3 3
4TK OAE -1.205 1.431 0.926 ETKDGv3 4
4TK CAS -2.277 1.002 -1.198 ETKDGv3 5
4TK CAA -1.454 0.951 -2.501 ETKDGv3 6
4TK CAB -3.463 0.023 -1.291 ETKDGv3 7
4TK CAC -2.832 2.434 -1.024 ETKDGv3 8
4TK C 0.563 -2.472 1.047 ETKDGv3 9
4TK O 0.848 -3.065 -0.030 ETKDGv3 10
4TK NAL 0.575 -3.201 2.278 ETKDGv3 11
4TK OAF 0.850 -4.527 2.290 ETKDGv3 12
4TK BRG 5.574 2.198 0.207 ETKDGv3 13
4TK CAQ 1.536 -0.211 0.815 ETKDGv3 14
4TK CAJ 2.085 -0.099 -0.411 ETKDGv3 15
4TK CAH 3.341 0.656 -0.601 ETKDGv3 16
4TK CAP 3.950 1.222 0.448 ETKDGv3 17
4TK CAI 3.366 1.089 1.799 ETKDGv3 18
4TK CAK 2.226 0.409 1.975 ETKDGv3 19
4TK H1 -0.166 -0.727 2.030 ETKDGv3 20
4TK H2 -0.929 -1.350 -0.750 ETKDGv3 21
4TK H3 -0.573 1.624 -2.430 ETKDGv3 22
4TK H4 -1.091 -0.078 -2.709 ETKDGv3 23
4TK H5 -2.072 1.273 -3.367 ETKDGv3 24
4TK H6 -4.041 0.023 -0.341 ETKDGv3 25
4TK H7 -3.117 -1.014 -1.488 ETKDGv3 26
4TK H8 -4.147 0.313 -2.117 ETKDGv3 27
4TK H9 -3.441 2.509 -0.097 ETKDGv3 28
4TK H10 -2.003 3.172 -0.962 ETKDGv3 29
4TK H11 -3.479 2.713 -1.884 ETKDGv3 30
4TK H12 0.357 -2.719 3.179 ETKDGv3 31
4TK H13 1.831 -4.582 2.423 ETKDGv3 32
4TK H14 1.616 -0.557 -1.273 ETKDGv3 33
4TK H15 3.764 0.746 -1.593 ETKDGv3 34
4TK H16 3.862 1.541 2.648 ETKDGv3 35
4TK H17 1.810 0.315 2.970 ETKDGv3 36
#