data_5BC
#
_chem_comp.id 5BC
_chem_comp.name "(5-{3-[4-(biphenyl-4-ylcarbonyl)-2-propylphenoxy]propoxy}-1H-indol-1-yl)acetic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C35 H33 N O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-07-02
_chem_comp.pdbx_modified_date 2011-06-24
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 547.640
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 5BC
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3NOA
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5BC C1 C1 C 0 1 Y N N N N N -6.613 6.557 46.067 7.347 -3.487 0.055 C1 5BC 1
5BC C2 C2 C 0 1 Y N N N N N -7.019 7.891 46.113 6.630 -4.418 0.805 C2 5BC 2
5BC C3 C3 C 0 1 Y N N N N N -7.036 8.606 47.317 7.056 -5.729 0.863 C3 5BC 3
5BC C4 C4 C 0 1 Y N N N N N -6.633 7.966 48.487 8.192 -6.121 0.178 C4 5BC 4
5BC C5 C5 C 0 1 Y N N N N N -6.209 6.623 48.442 8.908 -5.201 -0.568 C5 5BC 5
5BC C6 C6 C 0 1 Y N N N N N -6.192 5.907 47.236 8.491 -3.887 -0.634 C6 5BC 6
5BC C7 C7 C 0 1 Y N N N N N -6.603 4.553 42.381 6.036 0.556 -0.150 C7 5BC 7
5BC C8 C8 C 0 1 Y N N N N N -7.666 5.363 42.737 7.187 0.159 -0.836 C8 5BC 8
5BC C9 C9 C 0 1 Y N N N N N -7.674 6.027 43.962 7.610 -1.149 -0.769 C9 5BC 9
5BC C10 C10 C 0 1 Y N N N N N -6.604 5.880 44.839 6.890 -2.078 -0.016 C10 5BC 10
5BC C11 C11 C 0 1 Y N N N N N -5.516 5.069 44.484 5.741 -1.683 0.669 C11 5BC 11
5BC C12 C12 C 0 1 Y N N N N N -5.512 4.405 43.253 5.316 -0.375 0.604 C12 5BC 12
5BC C13 C13 C 0 1 Y N N N N N -7.920 3.466 40.307 4.143 2.274 -0.194 C13 5BC 13
5BC C14 C14 C 0 1 Y N N N N N -10.205 2.846 38.861 1.436 2.863 -0.166 C14 5BC 14
5BC C15 C15 C 0 1 Y N N N N N -9.091 3.319 38.188 2.370 3.890 -0.083 C15 5BC 15
5BC C16 C16 C 0 1 Y N N N N N -7.933 3.626 38.918 3.716 3.602 -0.097 C16 5BC 16
5BC C17 C17 C 0 1 Y N N N N N -9.052 2.991 40.989 3.201 1.244 -0.278 C17 5BC 17
5BC C18 C18 C 0 1 Y N N N N N -10.206 2.663 40.251 1.857 1.541 -0.264 C18 5BC 18
5BC C19 C19 C 0 1 Y N N N N N -12.610 5.417 35.764 -5.539 0.943 -0.350 C19 5BC 19
5BC C20 C20 C 0 1 Y N N N N N -12.264 7.802 35.772 -7.873 0.387 -0.393 C20 5BC 20
5BC C21 C21 C 0 1 Y N N N N N -11.237 7.699 34.832 -7.546 -0.977 -0.494 C21 5BC 21
5BC C22 C22 C 0 1 Y N N N N N -10.892 6.417 34.348 -6.210 -1.361 -0.522 C22 5BC 22
5BC C23 C23 C 0 1 Y N N N N N -11.593 5.291 34.813 -5.218 -0.408 -0.450 C23 5BC 23
5BC C24 C24 C 0 1 Y N N N N N -12.939 6.680 36.237 -6.860 1.344 -0.321 C24 5BC 24
5BC C25 C25 C 0 1 Y N N N N N -11.537 9.798 35.411 -9.788 -0.807 -0.484 C25 5BC 25
5BC N26 N26 N 0 1 Y N N N N N -10.833 8.967 34.628 -8.734 -1.677 -0.547 N26 5BC 26
5BC C27 C27 C 0 1 Y N N N N N -12.414 9.080 36.103 -9.337 0.453 -0.389 C27 5BC 27
5BC C28 C28 C 0 1 N N N N N N -10.104 9.617 32.247 -8.766 -3.747 0.718 C28 5BC 28
5BC O29 O29 O 0 1 N N N N N N -11.294 9.828 31.879 -8.849 -5.079 0.864 O29 5BC 29
5BC O30 O30 O 0 1 N N N N N N -9.123 9.486 31.491 -8.625 -3.041 1.688 O30 5BC 30
5BC C31 C31 C 0 1 N N N N N N -9.769 9.496 33.763 -8.849 -3.133 -0.656 C31 5BC 31
5BC O32 O32 O 0 1 N N N N N N -13.381 4.410 36.292 -4.547 1.870 -0.274 O32 5BC 32
5BC C33 C33 C 0 1 N N N N N N -12.899 3.120 36.387 -3.203 1.387 -0.303 C33 5BC 33
5BC C34 C34 C 0 1 N N N N N N -13.606 2.539 37.617 -2.234 2.567 -0.208 C34 5BC 34
5BC C35 C35 C 0 1 N N N N N N -12.533 2.088 38.633 -0.795 2.049 -0.240 C35 5BC 35
5BC O36 O36 O 0 1 N N N N N N -11.271 2.586 38.070 0.110 3.152 -0.151 O36 5BC 36
5BC C37 C37 C 0 1 N N N N N N -6.609 3.840 41.024 5.585 1.961 -0.216 C37 5BC 37
5BC O38 O38 O 0 1 N N N N N N -5.543 3.630 40.462 6.401 2.859 -0.288 O38 5BC 38
5BC C39 C39 C 0 1 N N N N N N -9.160 3.509 36.650 1.908 5.320 0.023 C39 5BC 39
5BC C40 C40 C 0 1 N N N N N N -7.880 3.930 35.972 1.624 5.657 1.488 C40 5BC 40
5BC C41 C41 C 0 1 N N N N N N -7.887 3.517 34.498 1.155 7.110 1.596 C41 5BC 41
5BC H2 H2 H 0 1 N N N N N N -7.326 8.382 45.202 5.743 -4.113 1.341 H2 5BC 42
5BC H3 H3 H 0 1 N N N N N N -7.356 9.637 47.338 6.502 -6.451 1.445 H3 5BC 43
5BC H4 H4 H 0 1 N N N N N N -6.646 8.498 49.427 8.522 -7.148 0.226 H4 5BC 44
5BC H5 H5 H 0 1 N N N N N N -5.891 6.136 49.352 9.795 -5.512 -1.101 H5 5BC 45
5BC H6 H6 H 0 1 N N N N N N -5.862 4.879 47.208 9.050 -3.171 -1.217 H6 5BC 46
5BC H8 H8 H 0 1 N N N N N N -8.498 5.482 42.059 7.745 0.877 -1.418 H8 5BC 47
5BC H9 H9 H 0 1 N N N N N N -8.510 6.655 44.231 8.500 -1.457 -1.298 H9 5BC 48
5BC H11 H11 H 0 1 N N N N N N -4.682 4.957 45.161 5.185 -2.402 1.251 H11 5BC 49
5BC H12 H12 H 0 1 N N N N N N -4.675 3.782 42.975 4.426 -0.069 1.134 H12 5BC 50
5BC H16 H16 H 0 1 N N N N N N -7.052 3.986 38.407 4.440 4.400 -0.032 H16 5BC 51
5BC H17 H17 H 0 1 N N N N N N -9.038 2.879 42.063 3.527 0.217 -0.354 H17 5BC 52
5BC H18 H18 H 0 1 N N N N N N -11.082 2.275 40.750 1.128 0.747 -0.327 H18 5BC 53
5BC H22 H22 H 0 1 N N N N N N -10.096 6.303 33.627 -5.950 -2.407 -0.599 H22 5BC 54
5BC H23 H23 H 0 1 N N N N N N -11.342 4.313 34.430 -4.182 -0.712 -0.471 H23 5BC 55
5BC H24 H24 H 0 1 N N N N N N -13.724 6.791 36.970 -7.107 2.393 -0.243 H24 5BC 56
5BC H25 H25 H 0 1 N N N N N N -11.412 10.869 35.469 -10.829 -1.093 -0.506 H25 5BC 57
5BC H27 H27 H 0 1 N N N N N N -13.128 9.469 36.814 -9.939 1.348 -0.322 H27 5BC 58
5BC HO29 HO29 H 0 0 N N N N N N -11.330 9.872 30.931 -8.790 -5.426 1.765 HO29 5BC 59
5BC H31 H31 H 0 1 N N N N N N -9.528 10.506 34.125 -9.805 -3.389 -1.111 H31 5BC 60
5BC H31A H31A H 0 0 N N N N N N -8.908 8.817 33.853 -8.038 -3.517 -1.275 H31A 5BC 61
5BC H33 H33 H 0 1 N N N N N N -13.134 2.540 35.482 -3.040 0.715 0.540 H33 5BC 62
5BC H33A H33A H 0 0 N N N N N N -11.807 3.112 36.515 -3.030 0.849 -1.235 H33A 5BC 63
5BC H34 H34 H 0 1 N N N N N N -14.251 3.305 38.072 -2.397 3.239 -1.051 H34 5BC 64
5BC H34A H34A H 0 0 N N N N N N -14.223 1.678 37.320 -2.407 3.105 0.724 H34A 5BC 65
5BC H35 H35 H 0 1 N N N N N N -12.722 2.516 39.629 -0.632 1.377 0.603 H35 5BC 66
5BC H35A H35A H 0 0 N N N N N N -12.518 0.993 38.738 -0.622 1.511 -1.172 H35A 5BC 67
5BC H39 H39 H 0 1 N N N N N N -9.458 2.544 36.215 2.685 5.982 -0.358 H39 5BC 68
5BC H39A H39A H 0 0 N N N N N N -9.908 4.291 36.451 0.998 5.453 -0.563 H39A 5BC 69
5BC H40 H40 H 0 1 N N N N N N -7.781 5.024 36.038 0.847 4.995 1.870 H40 5BC 70
5BC H40A H40A H 0 0 N N N N N N -7.030 3.447 36.476 2.533 5.525 2.074 H40A 5BC 71
5BC H41 H41 H 0 1 N N N N N N -6.946 3.833 34.024 0.953 7.350 2.640 H41 5BC 72
5BC H41A H41A H 0 0 N N N N N N -7.986 2.424 34.424 1.932 7.772 1.214 H41A 5BC 73
5BC H41B H41B H 0 0 N N N N N N -8.735 3.997 33.987 0.245 7.242 1.010 H41B 5BC 74
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5BC C1 C2 DOUB Y N 1
5BC C1 C6 SING Y N 2
5BC C1 C10 SING Y N 3
5BC C2 C3 SING Y N 4
5BC C3 C4 DOUB Y N 5
5BC C4 C5 SING Y N 6
5BC C5 C6 DOUB Y N 7
5BC C7 C8 DOUB Y N 8
5BC C7 C12 SING Y N 9
5BC C7 C37 SING N N 10
5BC C8 C9 SING Y N 11
5BC C9 C10 DOUB Y N 12
5BC C10 C11 SING Y N 13
5BC C11 C12 DOUB Y N 14
5BC C13 C16 DOUB Y N 15
5BC C13 C17 SING Y N 16
5BC C13 C37 SING N N 17
5BC C14 C15 DOUB Y N 18
5BC C14 C18 SING Y N 19
5BC C14 O36 SING N N 20
5BC C15 C16 SING Y N 21
5BC C15 C39 SING N N 22
5BC C17 C18 DOUB Y N 23
5BC C19 C23 DOUB Y N 24
5BC C19 C24 SING Y N 25
5BC C19 O32 SING N N 26
5BC C20 C21 SING Y N 27
5BC C20 C24 DOUB Y N 28
5BC C20 C27 SING Y N 29
5BC C21 C22 DOUB Y N 30
5BC C21 N26 SING Y N 31
5BC C22 C23 SING Y N 32
5BC C25 N26 SING Y N 33
5BC C25 C27 DOUB Y N 34
5BC N26 C31 SING N N 35
5BC C28 O29 SING N N 36
5BC C28 O30 DOUB N N 37
5BC C28 C31 SING N N 38
5BC O32 C33 SING N N 39
5BC C33 C34 SING N N 40
5BC C34 C35 SING N N 41
5BC C35 O36 SING N N 42
5BC C37 O38 DOUB N N 43
5BC C39 C40 SING N N 44
5BC C40 C41 SING N N 45
5BC C2 H2 SING N N 46
5BC C3 H3 SING N N 47
5BC C4 H4 SING N N 48
5BC C5 H5 SING N N 49
5BC C6 H6 SING N N 50
5BC C8 H8 SING N N 51
5BC C9 H9 SING N N 52
5BC C11 H11 SING N N 53
5BC C12 H12 SING N N 54
5BC C16 H16 SING N N 55
5BC C17 H17 SING N N 56
5BC C18 H18 SING N N 57
5BC C22 H22 SING N N 58
5BC C23 H23 SING N N 59
5BC C24 H24 SING N N 60
5BC C25 H25 SING N N 61
5BC C27 H27 SING N N 62
5BC O29 HO29 SING N N 63
5BC C31 H31 SING N N 64
5BC C31 H31A SING N N 65
5BC C33 H33 SING N N 66
5BC C33 H33A SING N N 67
5BC C34 H34 SING N N 68
5BC C34 H34A SING N N 69
5BC C35 H35 SING N N 70
5BC C35 H35A SING N N 71
5BC C39 H39 SING N N 72
5BC C39 H39A SING N N 73
5BC C40 H40 SING N N 74
5BC C40 H40A SING N N 75
5BC C41 H41 SING N N 76
5BC C41 H41A SING N N 77
5BC C41 H41B SING N N 78
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5BC SMILES ACDLabs 12.01 O=C(c2ccc(c1ccccc1)cc2)c5ccc(OCCCOc3cc4c(cc3)n(cc4)CC(=O)O)c(c5)CCC
5BC SMILES_CANONICAL CACTVS 3.370 CCCc1cc(ccc1OCCCOc2ccc3n(CC(O)=O)ccc3c2)C(=O)c4ccc(cc4)c5ccccc5
5BC SMILES CACTVS 3.370 CCCc1cc(ccc1OCCCOc2ccc3n(CC(O)=O)ccc3c2)C(=O)c4ccc(cc4)c5ccccc5
5BC SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 CCCc1cc(ccc1OCCCOc2ccc3c(c2)ccn3CC(=O)O)C(=O)c4ccc(cc4)c5ccccc5
5BC SMILES "OpenEye OEToolkits" 1.7.0 CCCc1cc(ccc1OCCCOc2ccc3c(c2)ccn3CC(=O)O)C(=O)c4ccc(cc4)c5ccccc5
5BC InChI InChI 1.03 InChI=1S/C35H33NO5/c1-2-7-29-22-30(35(39)27-12-10-26(11-13-27)25-8-4-3-5-9-25)14-17-33(29)41-21-6-20-40-31-15-16-32-28(23-31)18-19-36(32)24-34(37)38/h3-5,8-19,22-23H,2,6-7,20-21,24H2,1H3,(H,37,38)
5BC InChIKey InChI 1.03 KDJDNXXKJABUHE-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5BC "SYSTEMATIC NAME" ACDLabs 12.01 "(5-{3-[4-(biphenyl-4-ylcarbonyl)-2-propylphenoxy]propoxy}-1H-indol-1-yl)acetic acid"
5BC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "2-[5-[3-[4-(4-phenylphenyl)carbonyl-2-propyl-phenoxy]propoxy]indol-1-yl]ethanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5BC 'Create component' 2010-07-02 PDBJ
5BC 'Modify aromatic_flag' 2011-06-04 RCSB
5BC 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
5BC C1 C 5.598 1.905 1
5BC C2 C 5.598 3.405 2
5BC C3 C 4.299 4.155 3
5BC C4 C 3.000 3.405 4
5BC C5 C 3.000 1.905 5
5BC C6 C 4.299 1.155 6
5BC C7 C 9.495 -0.345 7
5BC C8 C 9.495 1.155 8
5BC C9 C 8.196 1.905 9
5BC C10 C 6.897 1.155 10
5BC C11 C 6.897 -0.345 11
5BC C12 C 8.196 -1.095 12
5BC C13 C 12.093 -0.345 13
5BC C14 C 14.691 1.155 14
5BC C15 C 14.691 -0.345 15
5BC C16 C 13.392 -1.095 16
5BC C17 C 12.093 1.155 17
5BC C18 C 13.392 1.905 18
5BC C19 C 22.486 1.155 19
5BC C20 C 25.084 1.155 20
5BC C21 C 25.084 -0.345 21
5BC C22 C 23.785 -1.095 22
5BC C23 C 22.486 -0.345 23
5BC C24 C 23.785 1.905 24
5BC C25 C 27.378 0.405 25
5BC N26 N 26.503 -0.802 26
5BC C27 C 26.503 1.612 27
5BC C28 C 28.437 -2.537 28
5BC O29 O 28.903 -3.963 29
5BC O30 O 29.439 -1.421 30
5BC C31 C 26.969 -2.228 31
5BC O32 O 21.187 1.905 32
5BC C33 C 19.887 1.155 33
5BC C34 C 18.588 1.905 34
5BC C35 C 17.290 1.155 35
5BC O36 O 15.990 1.905 36
5BC C37 C 10.794 -1.095 37
5BC O38 O 10.794 -2.595 38
5BC C39 C 15.990 -1.095 39
5BC C40 C 15.990 -2.595 40
5BC C41 C 17.290 -3.345 41
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
5BC C1 C2 DOUBLE NONE 1
5BC C1 C6 SINGLE NONE 2
5BC C1 C10 SINGLE NONE 3
5BC C2 C3 SINGLE NONE 4
5BC C3 C4 DOUBLE NONE 5
5BC C4 C5 SINGLE NONE 6
5BC C5 C6 DOUBLE NONE 7
5BC C7 C8 DOUBLE NONE 8
5BC C7 C12 SINGLE NONE 9
5BC C7 C37 SINGLE NONE 10
5BC C8 C9 SINGLE NONE 11
5BC C9 C10 DOUBLE NONE 12
5BC C10 C11 SINGLE NONE 13
5BC C11 C12 DOUBLE NONE 14
5BC C13 C16 DOUBLE NONE 15
5BC C13 C17 SINGLE NONE 16
5BC C13 C37 SINGLE NONE 17
5BC C14 C15 DOUBLE NONE 18
5BC C14 C18 SINGLE NONE 19
5BC C14 O36 SINGLE NONE 20
5BC C15 C16 SINGLE NONE 21
5BC C15 C39 SINGLE NONE 22
5BC C17 C18 DOUBLE NONE 23
5BC C19 C23 DOUBLE NONE 24
5BC C19 C24 SINGLE NONE 25
5BC C19 O32 SINGLE NONE 26
5BC C20 C21 SINGLE NONE 27
5BC C20 C24 DOUBLE NONE 28
5BC C20 C27 SINGLE NONE 29
5BC C21 C22 DOUBLE NONE 30
5BC C21 N26 SINGLE NONE 31
5BC C22 C23 SINGLE NONE 32
5BC C25 N26 SINGLE NONE 33
5BC C25 C27 DOUBLE NONE 34
5BC N26 C31 SINGLE NONE 35
5BC C28 O29 SINGLE NONE 36
5BC C28 O30 DOUBLE NONE 37
5BC C28 C31 SINGLE NONE 38
5BC O32 C33 SINGLE NONE 39
5BC C33 C34 SINGLE NONE 40
5BC C34 C35 SINGLE NONE 41
5BC C35 O36 SINGLE NONE 42
5BC C37 O38 DOUBLE NONE 43
5BC C39 C40 SINGLE NONE 44
5BC C40 C41 SINGLE NONE 45
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
5BC MurckoScaffold S1 scaffold 'O=C(c1ccc(OCCCOc2ccc3[nH]ccc3c2)cc1)c1ccc(-c2ccccc2)cc1' InChI=1S/C30H25NO3/c32-30(24-9-7-23(8-10-24)22-5-2-1-3-6-22)25-11-13-27(14-12-25)33-19-4-20-34-28-15-16-29-26(21-28)17-18-31-29/h1-3,5-18,21,31H,4,19-20H2 SXAFDYODLJSPFK-UHFFFAOYSA-N
5BC indole F1 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
5BC peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
5BC phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
5BC pyrrole F4 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
5BC C1 S1 1
5BC C2 S1 1
5BC C3 S1 1
5BC C4 S1 1
5BC C5 S1 1
5BC C6 S1 1
5BC C7 S1 1
5BC C8 S1 1
5BC C9 S1 1
5BC C10 S1 1
5BC C11 S1 1
5BC C12 S1 1
5BC C13 S1 1
5BC C14 S1 1
5BC C15 S1 1
5BC C16 S1 1
5BC C17 S1 1
5BC C18 S1 1
5BC C19 S1 1
5BC C20 S1 1
5BC C21 S1 1
5BC C22 S1 1
5BC C23 S1 1
5BC C24 S1 1
5BC C25 S1 1
5BC N26 S1 1
5BC C27 S1 1
5BC O32 S1 1
5BC C33 S1 1
5BC C34 S1 1
5BC C35 S1 1
5BC O36 S1 1
5BC C37 S1 1
5BC O38 S1 1
5BC C21 F1 1
5BC C20 F1 1
5BC C27 F1 1
5BC C25 F1 1
5BC N26 F1 1
5BC C24 F1 1
5BC C19 F1 1
5BC C23 F1 1
5BC C22 F1 1
5BC O30 F2 1
5BC C28 F2 1
5BC C31 F2 1
5BC N26 F2 1
5BC C1 F3 1
5BC C2 F3 1
5BC C3 F3 1
5BC C4 F3 1
5BC C5 F3 1
5BC C6 F3 1
5BC C7 F3 2
5BC C8 F3 2
5BC C9 F3 2
5BC C10 F3 2
5BC C11 F3 2
5BC C12 F3 2
5BC C13 F3 3
5BC C16 F3 3
5BC C15 F3 3
5BC C14 F3 3
5BC C18 F3 3
5BC C17 F3 3
5BC C19 F3 4
5BC C23 F3 4
5BC C22 F3 4
5BC C21 F3 4
5BC C20 F3 4
5BC C24 F3 4
5BC C21 F4 1
5BC C20 F4 1
5BC C27 F4 1
5BC C25 F4 1
5BC N26 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 5BC
_pdbe_chem_comp_rdkit_properties.exactmw 547.236
_pdbe_chem_comp_rdkit_properties.amw 547.651
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 41
_pdbe_chem_comp_rdkit_properties.NumAtoms 74
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.200
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 285.783
_pdbe_chem_comp_rdkit_properties.tpsa 77.760
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.527
_pdbe_chem_comp_rdkit_properties.CrippenMR 155.382
_pdbe_chem_comp_rdkit_properties.chi0v 19.988
_pdbe_chem_comp_rdkit_properties.chi1v 10.850
_pdbe_chem_comp_rdkit_properties.chi2v 4.692
_pdbe_chem_comp_rdkit_properties.chi3v 4.692
_pdbe_chem_comp_rdkit_properties.chi4v 2.995
_pdbe_chem_comp_rdkit_properties.chi0n 52.988
_pdbe_chem_comp_rdkit_properties.chi1n 27.258
_pdbe_chem_comp_rdkit_properties.chi2n 4.692
_pdbe_chem_comp_rdkit_properties.chi3n 4.692
_pdbe_chem_comp_rdkit_properties.chi4n 2.995
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.840
_pdbe_chem_comp_rdkit_properties.kappa1 8.352
_pdbe_chem_comp_rdkit_properties.kappa2 13.009
_pdbe_chem_comp_rdkit_properties.kappa3 6.844
_pdbe_chem_comp_rdkit_properties.Phi 2.650
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
5BC UniChem PDBe 5BC
5BC UniChem ZINC ZINC000066166267
5BC UniChem 'PubChem TPHARMA' 104219968
5BC UniChem PubChem 49850232
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
5BC C1 -6.453 0.073 -2.646 ETKDGv3 1
5BC C2 -7.494 0.801 -3.097 ETKDGv3 2
5BC C3 -8.447 0.225 -4.069 ETKDGv3 3
5BC C4 -8.284 -1.029 -4.506 ETKDGv3 4
5BC C5 -7.150 -1.838 -4.020 ETKDGv3 5
5BC C6 -6.283 -1.320 -3.141 ETKDGv3 6
5BC C7 -3.608 1.650 0.215 ETKDGv3 7
5BC C8 -4.096 2.436 -0.760 ETKDGv3 8
5BC C9 -5.067 1.905 -1.739 ETKDGv3 9
5BC C10 -5.492 0.629 -1.659 ETKDGv3 10
5BC C11 -4.973 -0.232 -0.567 ETKDGv3 11
5BC C12 -4.091 0.249 0.318 ETKDGv3 12
5BC C13 -1.594 1.337 1.826 ETKDGv3 13
5BC C14 0.426 -0.248 3.053 ETKDGv3 14
5BC C15 0.025 -0.515 1.791 ETKDGv3 15
5BC C16 -1.021 0.322 1.156 ETKDGv3 16
5BC C17 -1.139 1.637 3.203 ETKDGv3 17
5BC C18 -0.194 0.891 3.784 ETKDGv3 18
5BC C19 3.876 0.384 1.046 ETKDGv3 19
5BC C20 3.498 0.558 -1.338 ETKDGv3 20
5BC C21 4.847 0.118 -1.566 ETKDGv3 21
5BC C22 5.680 -0.161 -0.560 ETKDGv3 22
5BC C23 5.156 -0.023 0.826 ETKDGv3 23
5BC C24 2.997 0.708 -0.113 ETKDGv3 24
5BC C25 3.870 0.548 -3.562 ETKDGv3 25
5BC N26 5.091 0.082 -2.967 ETKDGv3 26
5BC C27 2.926 0.817 -2.652 ETKDGv3 27
5BC C28 7.058 1.349 -3.587 ETKDGv3 28
5BC O29 6.749 2.313 -4.541 ETKDGv3 29
5BC O30 7.870 1.616 -2.661 ETKDGv3 30
5BC C31 6.388 0.015 -3.634 ETKDGv3 31
5BC O32 3.333 0.512 2.331 ETKDGv3 32
5BC C33 4.025 0.234 3.547 ETKDGv3 33
5BC C34 3.069 0.402 4.731 ETKDGv3 34
5BC C35 2.091 -0.775 4.870 ETKDGv3 35
5BC O36 1.414 -1.052 3.644 ETKDGv3 36
5BC C37 -2.634 2.186 1.198 ETKDGv3 37
5BC O38 -2.696 3.405 1.519 ETKDGv3 38
5BC C39 0.598 -1.671 1.001 ETKDGv3 39
5BC C40 -0.327 -2.896 1.029 ETKDGv3 40
5BC C41 -0.403 -3.540 2.413 ETKDGv3 41
5BC H2 -7.666 1.810 -2.741 ETKDGv3 42
5BC H3 -9.280 0.819 -4.422 ETKDGv3 43
5BC H4 -8.983 -1.452 -5.216 ETKDGv3 44
5BC H5 -7.018 -2.849 -4.381 ETKDGv3 45
5BC H6 -5.446 -1.921 -2.807 ETKDGv3 46
5BC H8 -3.770 3.465 -0.859 ETKDGv3 47
5BC H9 -5.406 2.557 -2.534 ETKDGv3 48
5BC H11 -5.324 -1.251 -0.461 ETKDGv3 49
5BC H12 -3.749 -0.390 1.122 ETKDGv3 50
5BC H16 -1.307 0.110 0.133 ETKDGv3 51
5BC H17 -1.582 2.456 3.755 ETKDGv3 52
5BC H18 0.101 1.126 4.796 ETKDGv3 53
5BC H22 6.698 -0.479 -0.739 ETKDGv3 54
5BC H23 5.818 -0.257 1.648 ETKDGv3 55
5BC H24 1.984 1.060 0.035 ETKDGv3 56
5BC H25 3.739 0.687 -4.627 ETKDGv3 57
5BC H27 1.932 1.189 -2.864 ETKDGv3 58
5BC HO29 7.181 3.229 -4.513 ETKDGv3 59
5BC H31 7.025 -0.753 -3.146 ETKDGv3 60
5BC H31A 6.246 -0.290 -4.693 ETKDGv3 61
5BC H33 4.868 0.950 3.657 ETKDGv3 62
5BC H33A 4.430 -0.802 3.533 ETKDGv3 63
5BC H34 3.665 0.472 5.666 ETKDGv3 64
5BC H34A 2.511 1.357 4.622 ETKDGv3 65
5BC H35 2.666 -1.680 5.158 ETKDGv3 66
5BC H35A 1.361 -0.583 5.684 ETKDGv3 67
5BC H39 0.722 -1.352 -0.056 ETKDGv3 68
5BC H39A 1.613 -1.951 1.357 ETKDGv3 69
5BC H40 0.063 -3.650 0.311 ETKDGv3 70
5BC H40A -1.349 -2.610 0.697 ETKDGv3 71
5BC H41 -0.881 -2.849 3.138 ETKDGv3 72
5BC H41A 0.613 -3.807 2.772 ETKDGv3 73
5BC H41B -1.015 -4.465 2.357 ETKDGv3 74
#