data_5BO
#
_chem_comp.id 5BO
_chem_comp.name 5-bromo-6-ethyl-2-{5-[(4-methylpiperazin-1-yl)sulfonyl]-2-propoxyphenyl}pyrimidin-4(3H)-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H27 Br N4 O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-07-06
_chem_comp.pdbx_modified_date 2011-08-19
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 499.422
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 5BO
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3SIE
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5BO CAA CAA C 0 1 N N N N N N -24.177 -6.404 -1.795 -1.544 6.377 0.647 CAA 5BO 1
5BO CAB CAB C 0 1 N N N N N N -17.768 -3.695 1.395 -4.564 1.300 1.950 CAB 5BO 2
5BO CAC CAC C 0 1 N N N N N N -15.673 -4.603 -11.237 4.844 -1.266 3.979 CAC 5BO 3
5BO OAD OAD O 0 1 N N N N N N -20.559 -8.118 -0.231 -2.629 -3.110 -0.657 OAD 5BO 4
5BO OAE OAE O 0 1 N N N N N N -16.418 -4.492 -6.305 3.392 -1.687 -2.252 OAE 5BO 5
5BO OAF OAF O 0 1 N N N N N N -17.245 -2.143 -6.463 4.840 0.350 -2.226 OAF 5BO 6
5BO BRAG BRAG BR 0 0 N N N N N N -18.534 -7.249 1.898 -5.301 -1.857 0.107 BRAG 5BO 7
5BO CAH CAH C 0 1 Y N N N N N -20.186 -3.718 -5.940 2.670 1.818 -0.971 CAH 5BO 8
5BO CAI CAI C 0 1 Y N N N N N -21.262 -4.049 -5.123 1.587 2.599 -0.618 CAI 5BO 9
5BO CAJ CAJ C 0 1 Y N N N N N -18.659 -4.576 -4.303 1.284 -0.138 -0.997 CAJ 5BO 10
5BO CAK CAK C 0 1 N N N N N N -24.341 -5.042 -2.487 -1.798 4.879 0.459 CAK 5BO 11
5BO CAL CAL C 0 1 N N N N N N -17.116 -4.761 0.496 -4.542 1.125 0.430 CAL 5BO 12
5BO CAM CAM C 0 1 N N N N N N -23.348 -4.861 -3.651 -0.490 4.185 0.073 CAM 5BO 13
5BO CAN CAN C 0 1 N N N N N N -16.793 -5.430 -9.130 3.890 -2.049 1.895 CAN 5BO 14
5BO CAO CAO C 0 1 N N N N N N -16.766 -2.934 -9.647 5.295 -0.072 1.921 CAO 5BO 15
5BO CAP CAP C 0 1 N N N N N N -18.250 -5.230 -8.719 4.207 -2.316 0.420 CAP 5BO 16
5BO CAQ CAQ C 0 1 N N N N N N -18.225 -2.925 -9.200 5.669 -0.259 0.447 CAQ 5BO 17
5BO NAR NAR N 0 1 N N N N N N -18.505 -4.978 -1.531 -2.174 0.763 -0.126 NAR 5BO 18
5BO NAS NAS N 0 1 N N N N N N -20.218 -6.565 -1.817 -1.279 -1.329 -0.652 NAS 5BO 19
5BO OAT OAT O 0 1 N N N N N N -22.046 -4.956 -3.072 -0.727 2.787 -0.103 OAT 5BO 20
5BO CAU CAU C 0 1 Y N N N N N -18.892 -4.045 -5.557 2.518 0.454 -1.160 CAU 5BO 21
5BO CAV CAV C 0 1 Y N N N N N -21.024 -4.705 -3.914 0.338 2.020 -0.450 CAV 5BO 22
5BO CAW CAW C 0 1 N N N N N N -18.215 -5.458 -0.308 -3.386 0.239 0.043 CAW 5BO 23
5BO CAX CAX C 0 1 N N N N N N -18.925 -6.553 0.172 -3.584 -1.100 -0.132 CAX 5BO 24
5BO CAY CAY C 0 1 Y N N N N N -19.721 -5.035 -3.551 0.180 0.641 -0.639 CAY 5BO 25
5BO CAZ CAZ C 0 1 N N N N N N -19.395 -5.588 -2.323 -1.143 0.014 -0.463 CAZ 5BO 26
5BO CBA CBA C 0 1 N N N N N N -19.909 -7.150 -0.613 -2.488 -1.909 -0.493 CBA 5BO 27
5BO NBB NBB N 0 1 N N N N N N -16.576 -4.338 -10.103 5.038 -1.385 2.528 NBB 5BO 28
5BO NBC NBC N 0 1 N N N N N N -18.483 -3.896 -8.101 4.616 -1.050 -0.206 NBC 5BO 29
5BO SBD SBD S 0 1 N N N N N N -17.597 -3.605 -6.618 3.909 -0.529 -1.610 SBD 5BO 30
5BO HAA HAA H 0 1 N N N N N N -24.904 -6.488 -0.974 -1.168 6.801 -0.284 HAA 5BO 31
5BO HAAA HAAA H 0 0 N N N N N N -24.353 -7.209 -2.524 -2.476 6.871 0.922 HAAA 5BO 32
5BO HAAB HAAB H 0 0 N N N N N N -23.157 -6.490 -1.392 -0.807 6.524 1.436 HAAB 5BO 33
5BO HAB HAB H 0 1 N N N N N N -16.990 -3.183 1.981 -3.631 1.757 2.277 HAB 5BO 34
5BO HABA HABA H 0 0 N N N N N N -18.297 -2.961 0.769 -5.400 1.942 2.229 HABA 5BO 35
5BO HABB HABB H 0 0 N N N N N N -18.483 -4.178 2.077 -4.679 0.326 2.426 HABB 5BO 36
5BO HAC HAC H 0 1 N N N N N N -15.609 -3.707 -11.872 4.731 -2.260 4.413 HAC 5BO 37
5BO HACA HACA H 0 0 N N N N N N -14.672 -4.856 -10.857 5.708 -0.772 4.422 HACA 5BO 38
5BO HACB HACB H 0 0 N N N N N N -16.064 -5.444 -11.828 3.947 -0.679 4.178 HACB 5BO 39
5BO HAH HAH H 0 1 N N N N N N -20.358 -3.205 -6.875 3.639 2.274 -1.106 HAH 5BO 40
5BO HAI HAI H 0 1 N N N N N N -22.270 -3.801 -5.421 1.713 3.662 -0.474 HAI 5BO 41
5BO HAJ HAJ H 0 1 N N N N N N -17.653 -4.631 -3.914 1.170 -1.201 -1.146 HAJ 5BO 42
5BO HAK HAK H 0 1 N N N N N N -25.364 -4.971 -2.884 -2.173 4.455 1.390 HAK 5BO 43
5BO HAKA HAKA H 0 0 N N N N N N -24.163 -4.248 -1.747 -2.534 4.732 -0.331 HAKA 5BO 44
5BO HAL HAL H 0 1 N N N N N N -16.400 -4.283 -0.189 -5.475 0.669 0.102 HAL 5BO 45
5BO HALA HALA H 0 0 N N N N N N -16.585 -5.498 1.117 -4.427 2.099 -0.046 HALA 5BO 46
5BO HAM HAM H 0 1 N N N N N N -23.493 -5.643 -4.411 -0.114 4.610 -0.858 HAM 5BO 47
5BO HAMA HAMA H 0 0 N N N N N N -23.488 -3.882 -4.133 0.247 4.333 0.862 HAMA 5BO 48
5BO HAN HAN H 0 1 N N N N N N -16.112 -5.352 -8.270 3.013 -1.406 1.968 HAN 5BO 49
5BO HANA HANA H 0 0 N N N N N N -16.629 -6.419 -9.583 3.692 -2.994 2.402 HANA 5BO 50
5BO HAO HAO H 0 1 N N N N N N -16.581 -2.212 -10.456 6.115 0.417 2.446 HAO 5BO 51
5BO HAOA HAOA H 0 0 N N N N N N -16.084 -2.675 -8.824 4.398 0.543 1.994 HAOA 5BO 52
5BO HAP HAP H 0 1 N N N N N N -18.882 -5.316 -9.616 5.018 -3.041 0.346 HAP 5BO 53
5BO HAPA HAPA H 0 0 N N N N N N -18.517 -6.006 -7.987 3.320 -2.703 -0.081 HAPA 5BO 54
5BO HAQ HAQ H 0 1 N N N N N N -18.475 -1.916 -8.842 5.749 0.715 -0.036 HAQ 5BO 55
5BO HAQA HAQA H 0 0 N N N N N N -18.856 -3.193 -10.060 6.621 -0.785 0.375 HAQA 5BO 56
5BO HNAS HNAS H 0 0 N N N N N N -21.034 -6.848 -2.321 -0.511 -1.867 -0.901 HNAS 5BO 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5BO CAA CAK SING N N 1
5BO CAB CAL SING N N 2
5BO CAC NBB SING N N 3
5BO OAD CBA DOUB N N 4
5BO OAE SBD DOUB N N 5
5BO OAF SBD DOUB N N 6
5BO BRAG CAX SING N N 7
5BO CAH CAI DOUB Y N 8
5BO CAH CAU SING Y N 9
5BO CAI CAV SING Y N 10
5BO CAJ CAU DOUB Y N 11
5BO CAJ CAY SING Y N 12
5BO CAK CAM SING N N 13
5BO CAL CAW SING N N 14
5BO CAM OAT SING N N 15
5BO CAN CAP SING N N 16
5BO CAN NBB SING N N 17
5BO CAO CAQ SING N N 18
5BO CAO NBB SING N N 19
5BO CAP NBC SING N N 20
5BO CAQ NBC SING N N 21
5BO NAR CAW SING N N 22
5BO NAR CAZ DOUB N N 23
5BO NAS CAZ SING N N 24
5BO NAS CBA SING N N 25
5BO OAT CAV SING N N 26
5BO CAU SBD SING N N 27
5BO CAV CAY DOUB Y N 28
5BO CAW CAX DOUB N N 29
5BO CAX CBA SING N N 30
5BO CAY CAZ SING N N 31
5BO NBC SBD SING N N 32
5BO CAA HAA SING N N 33
5BO CAA HAAA SING N N 34
5BO CAA HAAB SING N N 35
5BO CAB HAB SING N N 36
5BO CAB HABA SING N N 37
5BO CAB HABB SING N N 38
5BO CAC HAC SING N N 39
5BO CAC HACA SING N N 40
5BO CAC HACB SING N N 41
5BO CAH HAH SING N N 42
5BO CAI HAI SING N N 43
5BO CAJ HAJ SING N N 44
5BO CAK HAK SING N N 45
5BO CAK HAKA SING N N 46
5BO CAL HAL SING N N 47
5BO CAL HALA SING N N 48
5BO CAM HAM SING N N 49
5BO CAM HAMA SING N N 50
5BO CAN HAN SING N N 51
5BO CAN HANA SING N N 52
5BO CAO HAO SING N N 53
5BO CAO HAOA SING N N 54
5BO CAP HAP SING N N 55
5BO CAP HAPA SING N N 56
5BO CAQ HAQ SING N N 57
5BO CAQ HAQA SING N N 58
5BO NAS HNAS SING N N 59
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5BO SMILES ACDLabs 12.01 O=S(=O)(c2cc(C1=NC(=C(Br)C(=O)N1)CC)c(OCCC)cc2)N3CCN(C)CC3
5BO InChI InChI 1.03 InChI=1S/C20H27BrN4O4S/c1-4-12-29-17-7-6-14(30(27,28)25-10-8-24(3)9-11-25)13-15(17)19-22-16(5-2)18(21)20(26)23-19/h6-7,13H,4-5,8-12H2,1-3H3,(H,22,23,26)
5BO InChIKey InChI 1.03 QERPGINNBBVVSA-UHFFFAOYSA-N
5BO SMILES_CANONICAL CACTVS 3.370 CCCOc1ccc(cc1C2=NC(=C(Br)C(=O)N2)CC)[S](=O)(=O)N3CCN(C)CC3
5BO SMILES CACTVS 3.370 CCCOc1ccc(cc1C2=NC(=C(Br)C(=O)N2)CC)[S](=O)(=O)N3CCN(C)CC3
5BO SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 CCCOc1ccc(cc1C2=NC(=C(C(=O)N2)Br)CC)S(=O)(=O)N3CCN(CC3)C
5BO SMILES "OpenEye OEToolkits" 1.7.2 CCCOc1ccc(cc1C2=NC(=C(C(=O)N2)Br)CC)S(=O)(=O)N3CCN(CC3)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5BO "SYSTEMATIC NAME" ACDLabs 12.01 5-bromo-6-ethyl-2-{5-[(4-methylpiperazin-1-yl)sulfonyl]-2-propoxyphenyl}pyrimidin-4(3H)-one
5BO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 5-bromanyl-4-ethyl-2-[5-(4-methylpiperazin-1-yl)sulfonyl-2-propoxy-phenyl]-1H-pyrimidin-6-one
#
_pdbx_chem_comp_audit.comp_id 5BO
_pdbx_chem_comp_audit.action_type 'Create component'
_pdbx_chem_comp_audit.date 2011-07-06
_pdbx_chem_comp_audit.processing_site PDBJ
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
5BO CAA C 6.897 -5.250 1
5BO CAB C 3.000 1.500 2
5BO CAC C 18.588 4.500 3
5BO OAD O 6.897 5.250 4
5BO OAE O 14.142 0.201 5
5BO OAF O 12.642 2.799 6
5BO BRAG Br 4.299 3.750 7
5BO CAH C 12.093 -0.750 8
5BO CAI C 10.794 -1.500 9
5BO CAJ C 10.794 1.500 10
5BO CAK C 6.897 -3.750 11
5BO CAL C 4.299 0.750 12
5BO CAM C 8.196 -3.000 13
5BO CAN C 17.290 2.250 14
5BO CAO C 15.990 4.500 15
5BO CAP C 15.990 1.500 16
5BO CAQ C 14.691 3.750 17
5BO NAR N 6.897 0.750 18
5BO NAS N 8.196 3.000 19
5BO OAT O 8.196 -1.500 20
5BO CAU C 12.093 0.750 21
5BO CAV C 9.495 -0.750 22
5BO CAW C 5.598 1.500 23
5BO CAX C 5.598 3.000 24
5BO CAY C 9.495 0.750 25
5BO CAZ C 8.196 1.500 26
5BO CBA C 6.897 3.750 27
5BO NBB N 17.290 3.750 28
5BO NBC N 14.691 2.250 29
5BO SBD S 13.392 1.500 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
5BO CAA CAK SINGLE NONE 1
5BO CAB CAL SINGLE NONE 2
5BO CAC NBB SINGLE NONE 3
5BO OAD CBA DOUBLE NONE 4
5BO OAE SBD DOUBLE NONE 5
5BO OAF SBD DOUBLE NONE 6
5BO BRAG CAX SINGLE NONE 7
5BO CAH CAI DOUBLE NONE 8
5BO CAH CAU SINGLE NONE 9
5BO CAI CAV SINGLE NONE 10
5BO CAJ CAU DOUBLE NONE 11
5BO CAJ CAY SINGLE NONE 12
5BO CAK CAM SINGLE NONE 13
5BO CAL CAW SINGLE NONE 14
5BO CAM OAT SINGLE NONE 15
5BO CAN CAP SINGLE NONE 16
5BO CAN NBB SINGLE NONE 17
5BO CAO CAQ SINGLE NONE 18
5BO CAO NBB SINGLE NONE 19
5BO CAP NBC SINGLE NONE 20
5BO CAQ NBC SINGLE NONE 21
5BO NAR CAW SINGLE NONE 22
5BO NAR CAZ DOUBLE NONE 23
5BO NAS CAZ SINGLE NONE 24
5BO NAS CBA SINGLE NONE 25
5BO OAT CAV SINGLE NONE 26
5BO CAU SBD SINGLE NONE 27
5BO CAV CAY DOUBLE NONE 28
5BO CAW CAX DOUBLE NONE 29
5BO CAX CBA SINGLE NONE 30
5BO CAY CAZ SINGLE NONE 31
5BO NBC SBD SINGLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
5BO MurckoScaffold S1 scaffold 'O=c1ccnc(-c2cccc(S(=O)(=O)N3CCNCC3)c2)[nH]1' InChI=1S/C14H16N4O3S/c19-13-4-5-16-14(17-13)11-2-1-3-12(10-11)22(20,21)18-8-6-15-7-9-18/h1-5,10,15H,6-9H2,(H,16,17,19) RSQWDGKJZVLPNU-UHFFFAOYSA-N
5BO phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
5BO piperazine F2 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
5BO pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
5BO Z45527544 F4 fragment COc1ccc(S(=O)(=O)N(C)C)cc1 InChI=1S/C9H13NO3S/c1-10(2)14(11,12)9-6-4-8(13-3)5-7-9/h4-7H,1-3H3 VPSAYJPTDGAIHN-UHFFFAOYSA-N
5BO Z285136922 F5 fragment Brc1cncnc1 InChI=1S/C4H3BrN2/c5-4-1-6-3-7-2-4/h1-3H GYCPLYCTMDTEPU-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
5BO OAD S1 1
5BO OAE S1 1
5BO OAF S1 1
5BO CAH S1 1
5BO CAI S1 1
5BO CAJ S1 1
5BO CAN S1 1
5BO CAO S1 1
5BO CAP S1 1
5BO CAQ S1 1
5BO NAR S1 1
5BO NAS S1 1
5BO CAU S1 1
5BO CAV S1 1
5BO CAW S1 1
5BO CAX S1 1
5BO CAY S1 1
5BO CAZ S1 1
5BO CBA S1 1
5BO NBB S1 1
5BO NBC S1 1
5BO SBD S1 1
5BO CAH F1 1
5BO CAI F1 1
5BO CAV F1 1
5BO CAY F1 1
5BO CAJ F1 1
5BO CAU F1 1
5BO NBB F2 1
5BO CAN F2 1
5BO CAP F2 1
5BO NBC F2 1
5BO CAQ F2 1
5BO CAO F2 1
5BO CAX F3 1
5BO CAW F3 1
5BO NAR F3 1
5BO CAZ F3 1
5BO NAS F3 1
5BO CBA F3 1
5BO CAM F4 1
5BO OAT F4 1
5BO CAV F4 1
5BO CAI F4 1
5BO CAH F4 1
5BO CAU F4 1
5BO CAJ F4 1
5BO CAY F4 1
5BO SBD F4 1
5BO OAE F4 1
5BO OAF F4 1
5BO NBC F4 1
5BO CAP F4 1
5BO CAQ F4 1
5BO BRAG F5 1
5BO CAX F5 1
5BO CAW F5 1
5BO NAR F5 1
5BO CAZ F5 1
5BO NAS F5 1
5BO CBA F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 5BO
_pdbe_chem_comp_rdkit_properties.exactmw 498.094
_pdbe_chem_comp_rdkit_properties.amw 499.431
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 57
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.500
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 222.987
_pdbe_chem_comp_rdkit_properties.tpsa 95.600
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.381
_pdbe_chem_comp_rdkit_properties.CrippenMR 117.894
_pdbe_chem_comp_rdkit_properties.chi0v 16.611
_pdbe_chem_comp_rdkit_properties.chi1v 9.517
_pdbe_chem_comp_rdkit_properties.chi2v 5.245
_pdbe_chem_comp_rdkit_properties.chi3v 5.245
_pdbe_chem_comp_rdkit_properties.chi4v 3.089
_pdbe_chem_comp_rdkit_properties.chi0n 41.208
_pdbe_chem_comp_rdkit_properties.chi1n 20.731
_pdbe_chem_comp_rdkit_properties.chi2n 3.147
_pdbe_chem_comp_rdkit_properties.chi3n 3.147
_pdbe_chem_comp_rdkit_properties.chi4n 1.896
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.750
_pdbe_chem_comp_rdkit_properties.kappa1 6.400
_pdbe_chem_comp_rdkit_properties.kappa2 9.590
_pdbe_chem_comp_rdkit_properties.kappa3 4.767
_pdbe_chem_comp_rdkit_properties.Phi 2.046
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
5BO UniChem ChEMBL CHEMBL1915519
5BO UniChem PDBe 5BO
5BO UniChem ZINC ZINC000073166500
5BO UniChem SureChEMBL SCHEMBL2566248
5BO UniChem PubChem 135566576
5BO UniChem BindingDb 50005060
5BO UniChem 'PubChem TPHARMA' 125321104
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
5BO CAA -4.543 -2.934 1.963 ETKDGv3 1
5BO CAB -1.957 5.025 0.008 ETKDGv3 2
5BO CAC 6.359 0.922 0.717 ETKDGv3 3
5BO OAD -5.793 1.179 -0.910 ETKDGv3 4
5BO OAE 3.278 -1.257 -3.089 ETKDGv3 5
5BO OAF 2.529 1.050 -2.889 ETKDGv3 6
5BO BRAG -5.465 3.936 0.471 ETKDGv3 7
5BO CAH 0.871 -2.265 -1.436 ETKDGv3 8
5BO CAI -0.313 -2.707 -1.002 ETKDGv3 9
5BO CAJ 0.128 0.052 -1.326 ETKDGv3 10
5BO CAK -4.382 -3.660 0.629 ETKDGv3 11
5BO CAL -2.302 3.964 1.048 ETKDGv3 12
5BO CAM -2.954 -3.557 0.095 ETKDGv3 13
5BO CAN 4.025 1.140 1.412 ETKDGv3 14
5BO CAO 4.995 -1.092 1.051 ETKDGv3 15
5BO CAP 3.364 1.141 0.015 ETKDGv3 16
5BO CAQ 3.863 -1.231 0.015 ETKDGv3 17
5BO NAR -1.906 1.686 0.048 ETKDGv3 18
5BO NAS -3.611 0.359 -0.917 ETKDGv3 19
5BO OAT -2.633 -2.194 -0.164 ETKDGv3 20
5BO CAU 1.111 -0.817 -1.601 ETKDGv3 21
5BO CAV -1.405 -1.749 -0.677 ETKDGv3 22
5BO CAW -2.845 2.723 0.390 ETKDGv3 23
5BO CAX -4.152 2.586 0.080 ETKDGv3 24
5BO CAY -1.197 -0.425 -0.854 ETKDGv3 25
5BO CAZ -2.242 0.576 -0.544 ETKDGv3 26
5BO CBA -4.585 1.354 -0.600 ETKDGv3 27
5BO NBB 5.246 0.310 1.464 ETKDGv3 28
5BO NBC 3.785 -0.014 -0.801 ETKDGv3 29
5BO SBD 2.691 -0.246 -2.143 ETKDGv3 30
5BO HAA -4.340 -1.848 1.841 ETKDGv3 31
5BO HAAA -3.847 -3.356 2.719 ETKDGv3 32
5BO HAAB -5.584 -3.059 2.329 ETKDGv3 33
5BO HAB -1.540 5.920 0.515 ETKDGv3 34
5BO HABA -2.865 5.327 -0.555 ETKDGv3 35
5BO HABB -1.199 4.633 -0.704 ETKDGv3 36
5BO HAC 7.299 0.366 0.922 ETKDGv3 37
5BO HACA 6.520 1.969 1.051 ETKDGv3 38
5BO HACB 6.172 0.916 -0.378 ETKDGv3 39
5BO HAH 1.658 -2.974 -1.660 ETKDGv3 40
5BO HAI -0.459 -3.772 -0.884 ETKDGv3 41
5BO HAJ 0.296 1.115 -1.449 ETKDGv3 42
5BO HAK -4.641 -4.732 0.767 ETKDGv3 43
5BO HAKA -5.087 -3.226 -0.113 ETKDGv3 44
5BO HAL -3.019 4.375 1.789 ETKDGv3 45
5BO HALA -1.378 3.702 1.609 ETKDGv3 46
5BO HAM -2.884 -4.140 -0.849 ETKDGv3 47
5BO HAMA -2.243 -3.981 0.837 ETKDGv3 48
5BO HAN 4.248 2.182 1.729 ETKDGv3 49
5BO HANA 3.299 0.741 2.154 ETKDGv3 50
5BO HAO 4.722 -1.682 1.953 ETKDGv3 51
5BO HAOA 5.921 -1.560 0.647 ETKDGv3 52
5BO HAP 3.655 2.072 -0.518 ETKDGv3 53
5BO HAPA 2.261 1.159 0.151 ETKDGv3 54
5BO HAQ 4.072 -2.115 -0.626 ETKDGv3 55
5BO HAQA 2.897 -1.408 0.541 ETKDGv3 56
5BO HNAS -3.892 -0.478 -1.476 ETKDGv3 57
#