data_5HM
#
_chem_comp.id 5HM
_chem_comp.name "5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate)"
_chem_comp.type "RNA LINKING"
_chem_comp.pdbx_type ATOMN
_chem_comp.formula "C10 H16 N3 O9 P"
_chem_comp.mon_nstd_parent_comp_id C
_chem_comp.pdbx_synonyms "5-hydroxymethylcytidine 5'-monophosphate"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-01-22
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 353.223
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 5HM
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4OHB
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5HM OP3 OP3 O 0 1 N Y N N N N 3.773 -7.235 -3.234 -4.862 2.213 -1.412 OP3 5HM 1
5HM P P P 0 1 N N N N N N 2.904 -6.901 -4.454 -4.584 1.141 -0.243 P 5HM 2
5HM OP1 OP1 O 0 1 N N N N N N 3.120 -7.865 -5.629 -4.436 1.848 1.049 OP1 5HM 3
5HM OP2 OP2 O 0 1 N N N N N N 2.791 -5.438 -4.819 -5.820 0.113 -0.153 OP2 5HM 4
5HM "O5'" "O5'" O 0 1 N N N N N N 1.413 -7.204 -3.967 -3.233 0.329 -0.568 "O5'" 5HM 5
5HM "C5'" "C5'" C 0 1 N N N N N N 1.126 -8.577 -3.730 -2.660 -0.622 0.331 "C5'" 5HM 6
5HM "C4'" "C4'" C 0 1 N N R N N N -0.371 -8.722 -3.582 -1.387 -1.205 -0.285 "C4'" 5HM 7
5HM "O4'" "O4'" O 0 1 N N N N N N -1.043 -8.225 -4.754 -0.346 -0.205 -0.331 "O4'" 5HM 8
5HM "C3'" "C3'" C 0 1 N N S N N N -0.720 -10.182 -3.369 -0.819 -2.326 0.613 "C3'" 5HM 9
5HM "O3'" "O3'" O 0 1 N N N N N N -1.304 -10.430 -2.073 -1.212 -3.609 0.123 "O3'" 5HM 10
5HM "C2'" "C2'" C 0 1 N N R N N N -1.674 -10.496 -4.502 0.713 -2.151 0.508 "C2'" 5HM 11
5HM "O2'" "O2'" O 0 1 N N N N N N -2.961 -10.787 -3.971 1.313 -3.321 -0.051 "O2'" 5HM 12
5HM "C1'" "C1'" C 0 1 N N R N N N -1.699 -9.304 -5.447 0.889 -0.946 -0.442 "C1'" 5HM 13
5HM N1 N1 N 0 1 N N N N N N -0.982 -9.669 -6.701 2.020 -0.119 -0.013 N1 5HM 14
5HM C2 C2 C 0 1 N N N N N N -1.560 -10.511 -7.562 1.996 0.473 1.195 C2 5HM 15
5HM O2 O2 O 0 1 N N N N N N -2.784 -11.010 -7.269 1.029 0.315 1.921 O2 5HM 16
5HM C6 C6 C 0 1 N N N N N N 0.242 -9.138 -6.953 3.093 0.041 -0.838 C6 5HM 17
5HM C5 C5 C 0 1 N N N N N N 0.945 -9.462 -8.088 4.132 0.807 -0.430 C5 5HM 18
5HM CM5 CM5 C 0 1 N N N N N N 2.286 -8.817 -8.298 5.333 1.004 -1.319 CM5 5HM 19
5HM OM5 OM5 O 0 1 N N N N N N 2.116 -7.403 -8.093 5.144 0.285 -2.540 OM5 5HM 20
5HM C4 C4 C 0 1 N N N N N N 0.284 -10.413 -9.033 4.074 1.419 0.839 C4 5HM 21
5HM N3 N3 N 0 1 N N N N N N -0.944 -10.893 -8.700 3.011 1.229 1.610 N3 5HM 22
5HM N4 N4 N 0 1 N N N N N N 0.837 -10.802 -10.214 5.116 2.201 1.279 N4 5HM 23
5HM H1 H1 H 0 1 N N N N N N 4.306 -7.998 -3.424 -5.662 2.739 -1.281 H1 5HM 24
5HM H2 H2 H 0 1 N N N N N N 2.875 -5.339 -5.760 -5.976 -0.386 -0.966 H2 5HM 25
5HM H3 H3 H 0 1 N N N N N N 1.478 -9.184 -4.577 -2.415 -0.129 1.273 H3 5HM 26
5HM H4 H4 H 0 1 N N N N N N 1.626 -8.909 -2.808 -3.375 -1.423 0.516 H4 5HM 27
5HM H5 H5 H 0 1 N N N N N N -0.695 -8.151 -2.699 -1.592 -1.588 -1.285 H5 5HM 28
5HM H6 H6 H 0 1 N N N N N N 0.190 -10.787 -3.491 -1.150 -2.194 1.643 H6 5HM 29
5HM "HO3'" "HO3'" H 0 0 N Y N N N N -0.672 -10.220 -1.395 -0.882 -4.349 0.650 H7 5HM 30
5HM H8 H8 H 0 1 N N N N N N -1.291 -11.369 -5.051 1.141 -1.934 1.487 H8 5HM 31
5HM H9 H9 H 0 1 N N N N N N -2.902 -11.535 -3.388 1.180 -4.121 0.476 H9 5HM 32
5HM H10 H10 H 0 1 N N N N N N -2.742 -9.040 -5.676 1.035 -1.288 -1.467 H10 5HM 33
5HM H11 H11 H 0 1 N N N N N N 0.673 -8.445 -6.245 3.114 -0.438 -1.806 H11 5HM 34
5HM H12 H12 H 0 1 N N N N N N 2.640 -9.009 -9.321 5.453 2.065 -1.538 H12 5HM 35
5HM H13 H13 H 0 1 N N N N N N 3.014 -9.217 -7.577 6.224 0.634 -0.813 H13 5HM 36
5HM H14 H14 H 0 1 N N N N N N 2.404 -7.173 -7.217 5.880 0.367 -3.162 H14 5HM 37
5HM H15 H15 H 0 1 N N N N N N 0.341 -11.428 -10.816 5.075 2.616 2.155 H15 5HM 38
5HM H16 H16 H 0 1 N N N N N N 1.739 -10.462 -10.480 5.892 2.338 0.713 H16 5HM 39
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5HM N4 C4 SING N N 1
5HM C4 N3 DOUB N N 2
5HM C4 C5 SING N N 3
5HM N3 C2 SING N N 4
5HM CM5 OM5 SING N N 5
5HM CM5 C5 SING N N 6
5HM C5 C6 DOUB N N 7
5HM C2 O2 DOUB N N 8
5HM C2 N1 SING N N 9
5HM C6 N1 SING N N 10
5HM N1 "C1'" SING N N 11
5HM OP1 P DOUB N N 12
5HM "C1'" "O4'" SING N N 13
5HM "C1'" "C2'" SING N N 14
5HM OP2 P SING N N 15
5HM "O4'" "C4'" SING N N 16
5HM "C2'" "O2'" SING N N 17
5HM "C2'" "C3'" SING N N 18
5HM P "O5'" SING N N 19
5HM P OP3 SING N N 20
5HM "O5'" "C5'" SING N N 21
5HM "C5'" "C4'" SING N N 22
5HM "C4'" "C3'" SING N N 23
5HM "C3'" "O3'" SING N N 24
5HM OP3 H1 SING N N 25
5HM OP2 H2 SING N N 26
5HM "C5'" H3 SING N N 27
5HM "C5'" H4 SING N N 28
5HM "C4'" H5 SING N N 29
5HM "C3'" H6 SING N N 30
5HM "O3'" "HO3'" SING N N 31
5HM "C2'" H8 SING N N 32
5HM "O2'" H9 SING N N 33
5HM "C1'" H10 SING N N 34
5HM C6 H11 SING N N 35
5HM CM5 H12 SING N N 36
5HM CM5 H13 SING N N 37
5HM OM5 H14 SING N N 38
5HM N4 H15 SING N N 39
5HM N4 H16 SING N N 40
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5HM SMILES ACDLabs 12.01 O=P(O)(O)OCC2OC(N1C(=O)N=C(N)C(=C1)CO)C(O)C2O
5HM InChI InChI 1.03 InChI=1S/C10H16N3O9P/c11-8-4(2-14)1-13(10(17)12-8)9-7(16)6(15)5(22-9)3-21-23(18,19)20/h1,5-7,9,14-16H,2-3H2,(H2,11,12,17)(H2,18,19,20)/t5-,6-,7-,9-/m1/s1
5HM InChIKey InChI 1.03 KPUOHXMVCZBWQC-JXOAFFINSA-N
5HM SMILES_CANONICAL CACTVS 3.385 NC1=NC(=O)N(C=C1CO)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O
5HM SMILES CACTVS 3.385 NC1=NC(=O)N(C=C1CO)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O
5HM SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 C1=C(C(=NC(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)N)CO
5HM SMILES "OpenEye OEToolkits" 1.7.6 C1=C(C(=NC(=O)N1C2C(C(C(O2)COP(=O)(O)O)O)O)N)CO
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5HM "SYSTEMATIC NAME" ACDLabs 12.01 "5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate)"
5HM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R,5R)-5-[4-azanyl-5-(hydroxymethyl)-2-oxidanylidene-pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5HM 'Create component' 2014-01-22 PDBJ
5HM 'Initial release' 2014-06-25 RCSB
5HM 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 5HM
_pdbx_chem_comp_synonyms.name "5-hydroxymethylcytidine 5'-monophosphate"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 5HM
_pdbe_chem_comp_synonyms.name "5-hydroxymethylcytidine 5'-monophosphate"
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
5HM OP3 O 10.494 -5.797 1
5HM P P 11.708 -4.915 2
5HM OP1 O 12.589 -6.129 3
5HM OP2 O 12.921 -4.033 4
5HM "O5'" O 10.826 -3.701 5
5HM "C5'" C 9.334 -3.858 6
5HM "C4'" C 8.453 -2.645 7
5HM "O4'" O 8.916 -1.218 8
5HM "C3'" C 6.952 -2.645 9
5HM "O3'" O 6.071 -3.858 10
5HM "C2'" C 6.489 -1.218 11
5HM "O2'" O 5.062 -0.755 12
5HM "C1'" C 7.702 -0.337 13
5HM N1 N 7.702 1.163 14
5HM C2 C 9.002 1.914 15
5HM O2 O 10.301 1.163 16
5HM C6 C 6.404 1.914 17
5HM C5 C 6.404 3.413 18
5HM CM5 C 5.104 4.163 19
5HM OM5 O 3.805 3.413 20
5HM C4 C 7.702 4.163 21
5HM N3 N 9.002 3.413 22
5HM N4 N 7.702 5.663 23
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
5HM N4 C4 SINGLE NONE 1
5HM C4 N3 DOUBLE NONE 2
5HM C4 C5 SINGLE NONE 3
5HM N3 C2 SINGLE NONE 4
5HM CM5 OM5 SINGLE NONE 5
5HM CM5 C5 SINGLE NONE 6
5HM C5 C6 DOUBLE NONE 7
5HM C2 O2 DOUBLE NONE 8
5HM C2 N1 SINGLE NONE 9
5HM C6 N1 SINGLE NONE 10
5HM "C1'" N1 SINGLE BEGINDASH 11
5HM OP1 P DOUBLE NONE 12
5HM "C1'" "O4'" SINGLE NONE 13
5HM "C1'" "C2'" SINGLE NONE 14
5HM OP2 P SINGLE NONE 15
5HM "O4'" "C4'" SINGLE NONE 16
5HM "C2'" "O2'" SINGLE BEGINWEDGE 17
5HM "C2'" "C3'" SINGLE NONE 18
5HM P "O5'" SINGLE NONE 19
5HM P OP3 SINGLE NONE 20
5HM "O5'" "C5'" SINGLE NONE 21
5HM "C4'" "C5'" SINGLE BEGINDASH 22
5HM "C4'" "C3'" SINGLE NONE 23
5HM "C3'" "O3'" SINGLE BEGINWEDGE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
5HM MurckoScaffold S1 scaffold 'O=c1ncccn1[C@H]1CCCO1' InChI=1S/C8H10N2O2/c11-8-9-4-2-5-10(8)7-3-1-6-12-7/h2,4-5,7H,1,3,6H2/t7-/m1/s1 AKXKPKRAUWTVBW-SSDOTTSWSA-N
5HM phosphate F1 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
5HM pyrimidine F2 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
5HM ribose F3 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
5HM "C4'" S1 1
5HM "O4'" S1 1
5HM "C3'" S1 1
5HM "C2'" S1 1
5HM "C1'" S1 1
5HM N1 S1 1
5HM C2 S1 1
5HM O2 S1 1
5HM C6 S1 1
5HM C5 S1 1
5HM C4 S1 1
5HM N3 S1 1
5HM OP3 F1 1
5HM P F1 1
5HM OP1 F1 1
5HM OP2 F1 1
5HM "O5'" F1 1
5HM C5 F2 1
5HM C4 F2 1
5HM N3 F2 1
5HM C2 F2 1
5HM N1 F2 1
5HM C6 F2 1
5HM "C2'" F3 1
5HM "C3'" F3 1
5HM "C4'" F3 1
5HM "O4'" F3 1
5HM "C1'" F3 1
5HM "C5'" F3 1
5HM "O5'" F3 1
5HM "O3'" F3 1
5HM "O2'" F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 5HM
_pdbe_chem_comp_rdkit_properties.exactmw 353.062
_pdbe_chem_comp_rdkit_properties.amw 353.224
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23
_pdbe_chem_comp_rdkit_properties.NumAtoms 39
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.600
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 151.543
_pdbe_chem_comp_rdkit_properties.tpsa 197.590
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.489
_pdbe_chem_comp_rdkit_properties.CrippenMR 71.770
_pdbe_chem_comp_rdkit_properties.chi0v 11.358
_pdbe_chem_comp_rdkit_properties.chi1v 6.711
_pdbe_chem_comp_rdkit_properties.chi2v 2.516
_pdbe_chem_comp_rdkit_properties.chi3v 2.516
_pdbe_chem_comp_rdkit_properties.chi4v 1.508
_pdbe_chem_comp_rdkit_properties.chi0n 26.463
_pdbe_chem_comp_rdkit_properties.chi1n 12.686
_pdbe_chem_comp_rdkit_properties.chi2n 2.201
_pdbe_chem_comp_rdkit_properties.chi3n 2.201
_pdbe_chem_comp_rdkit_properties.chi4n 1.314
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.370
_pdbe_chem_comp_rdkit_properties.kappa1 6.169
_pdbe_chem_comp_rdkit_properties.kappa2 6.629
_pdbe_chem_comp_rdkit_properties.kappa3 3.940
_pdbe_chem_comp_rdkit_properties.Phi 1.778
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
5HM UniChem PDBe 5HM
5HM UniChem ZINC ZINC000098208520
5HM UniChem SureChEMBL SCHEMBL3471036
5HM UniChem PubChem 68655403
5HM UniChem BRENDA 210695
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
5HM OP3 3.867 -1.758 1.995 ETKDGv3 1
5HM P 4.533 -1.898 0.445 ETKDGv3 2
5HM OP1 4.889 -3.345 0.188 ETKDGv3 3
5HM OP2 5.936 -0.955 0.344 ETKDGv3 4
5HM "O5'" 3.398 -1.392 -0.722 ETKDGv3 5
5HM "C5'" 3.107 -0.033 -0.495 ETKDGv3 6
5HM "C4'" 2.031 0.425 -1.486 ETKDGv3 7
5HM "O4'" 0.888 -0.399 -1.350 ETKDGv3 8
5HM "C3'" 1.634 1.890 -1.252 ETKDGv3 9
5HM "O3'" 1.540 2.553 -2.489 ETKDGv3 10
5HM "C2'" 0.277 1.766 -0.599 ETKDGv3 11
5HM "O2'" -0.589 2.816 -0.944 ETKDGv3 12
5HM "C1'" -0.222 0.445 -1.154 ETKDGv3 13
5HM N1 -1.201 -0.176 -0.247 ETKDGv3 14
5HM C2 -0.813 -0.885 0.942 ETKDGv3 15
5HM O2 0.399 -1.018 1.258 ETKDGv3 16
5HM C6 -2.606 0.024 -0.483 ETKDGv3 17
5HM C5 -3.534 -0.464 0.365 ETKDGv3 18
5HM CM5 -5.012 -0.233 0.113 ETKDGv3 19
5HM OM5 -5.247 0.868 -0.726 ETKDGv3 20
5HM C4 -3.089 -1.295 1.527 ETKDGv3 21
5HM N3 -1.823 -1.456 1.774 ETKDGv3 22
5HM N4 -4.037 -1.947 2.380 ETKDGv3 23
5HM H1 4.610 -1.983 2.610 ETKDGv3 24
5HM H2 6.231 -1.040 -0.598 ETKDGv3 25
5HM H3 2.727 0.127 0.540 ETKDGv3 26
5HM H4 4.018 0.589 -0.655 ETKDGv3 27
5HM H5 2.438 0.299 -2.514 ETKDGv3 28
5HM H6 2.350 2.422 -0.579 ETKDGv3 29
5HM "HO3'" 1.604 3.525 -2.301 ETKDGv3 30
5HM H8 0.395 1.701 0.509 ETKDGv3 31
5HM H9 -0.294 3.605 -0.419 ETKDGv3 32
5HM H10 -0.689 0.615 -2.152 ETKDGv3 33
5HM H11 -2.911 0.590 -1.355 ETKDGv3 34
5HM H12 -5.437 -1.140 -0.364 ETKDGv3 35
5HM H13 -5.545 -0.068 1.076 ETKDGv3 36
5HM H14 -5.066 1.681 -0.185 ETKDGv3 37
5HM H15 -5.055 -1.980 2.159 ETKDGv3 38
5HM H16 -3.706 -2.477 3.217 ETKDGv3 39
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