data_5WE
#
_chem_comp.id 5WE
_chem_comp.name
4-[8-azanyl-3-[(2~{S})-1-[4-(dimethylamino)butanoyl]pyrrolidin-2-yl]imidazo[1,5-a]pyrazin-1-yl]-~{N}-(1,3-thiazol-2-yl)benzamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H30 N8 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-12-15
_chem_comp.pdbx_modified_date 2016-01-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 518.634
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 5WE
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5FBN
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5WE C2 C1 C 0 1 Y N N N N N -12.253 20.441 -30.148 -2.852 4.375 -2.113 C2 5WE 1
5WE C3 C2 C 0 1 Y N N N N N -13.592 20.377 -30.056 -3.361 3.619 -1.121 C3 5WE 2
5WE C4 C3 C 0 1 Y N N N N N -11.973 19.140 -28.233 -0.726 3.504 -1.821 C4 5WE 3
5WE C5 C4 C 0 1 Y N N N N N -13.379 19.010 -28.107 -1.208 2.690 -0.774 C5 5WE 4
5WE C12 C5 C 0 1 N N N N N N -18.043 20.854 -27.804 -4.807 1.233 3.535 C12 5WE 5
5WE C13 C6 C 0 1 N N N N N N -18.770 19.638 -28.441 -4.356 -0.097 2.883 C13 5WE 6
5WE N14 N1 N 0 1 N N N N N N -17.805 19.031 -29.386 -4.266 0.200 1.442 N14 5WE 7
5WE N15 N2 N 0 1 N N N N N N -11.125 18.726 -27.221 0.609 3.454 -2.186 N15 5WE 8
5WE C16 C7 C 0 1 Y N N N N N -14.001 17.439 -26.112 0.783 1.333 0.095 C16 5WE 9
5WE C17 C8 C 0 1 Y N N N N N -12.903 16.569 -26.116 1.797 2.294 0.030 C17 5WE 10
5WE C18 C9 C 0 1 Y N N N N N -12.684 15.726 -25.064 3.106 1.907 0.052 C18 5WE 11
5WE C19 C10 C 0 1 Y N N N N N -13.550 15.726 -23.958 3.433 0.549 0.139 C19 5WE 12
5WE C20 C11 C 0 1 Y N N N N N -14.671 16.567 -23.965 2.418 -0.411 0.204 C20 5WE 13
5WE C21 C12 C 0 1 Y N N N N N -14.884 17.418 -25.024 1.109 -0.023 0.182 C21 5WE 14
5WE C22 C13 C 0 1 N N N N N N -13.300 14.758 -22.874 4.847 0.131 0.162 C22 5WE 15
5WE O37 O1 O 0 1 N N N N N N -17.073 17.485 -30.789 -4.274 -0.344 -0.709 O37 5WE 16
5WE C30 C14 C 0 1 N N N N N N -17.958 17.862 -30.041 -4.363 -0.703 0.446 C30 5WE 17
5WE C31 C15 C 0 1 N N N N N N -19.176 17.040 -29.854 -4.580 -2.159 0.768 C31 5WE 18
5WE C32 C16 C 0 1 N N N N N N -19.330 15.882 -30.506 -4.653 -2.964 -0.531 C32 5WE 19
5WE C11 C17 C 0 1 N N N N N N -17.087 21.289 -28.942 -4.040 2.276 2.680 C11 5WE 20
5WE C10 C18 C 0 1 N N S N N N -16.642 19.923 -29.506 -4.055 1.645 1.271 C10 5WE 21
5WE C7 C19 C 0 1 Y N N N N N -15.457 19.392 -28.742 -2.737 1.892 0.584 C7 5WE 22
5WE N6 N3 N 0 1 Y N N N N N -14.175 19.651 -29.045 -2.543 2.757 -0.430 N6 5WE 23
5WE N8 N4 N 0 1 Y N N N N N -15.505 18.569 -27.731 -1.610 1.300 0.882 N8 5WE 24
5WE C9 C20 C 0 1 Y N N N N N -14.267 18.355 -27.246 -0.634 1.753 0.078 C9 5WE 25
5WE N1 N5 N 0 1 Y N N N N N -11.468 19.871 -29.221 -1.559 4.312 -2.450 N1 5WE 26
5WE O24 O2 O 0 1 N N N N N N -14.250 14.158 -22.412 5.729 0.966 0.105 O24 5WE 27
5WE N23 N6 N 0 1 N N N N N N -12.056 14.466 -22.448 5.162 -1.176 0.246 N23 5WE 28
5WE C25 C21 C 0 1 Y N N N N N -11.841 13.487 -21.483 6.493 -1.570 0.268 C25 5WE 29
5WE N29 N7 N 0 1 Y N N N N N -10.666 13.138 -21.069 6.904 -2.798 0.346 N29 5WE 30
5WE S26 S1 S 0 1 Y N N N N N -13.042 12.526 -20.723 7.830 -0.508 0.187 S26 5WE 31
5WE C28 C22 C 0 1 Y N N N N N -10.610 12.173 -20.176 8.209 -2.992 0.355 C28 5WE 32
5WE C27 C23 C 0 1 Y N N N N N -11.795 11.676 -19.826 8.936 -1.876 0.278 C27 5WE 33
5WE H1 H1 H 0 1 N N N N N N -11.802 20.959 -30.981 -3.506 5.045 -2.652 H1 5WE 34
5WE H2 H2 H 0 1 N N N N N N -14.209 20.895 -30.775 -4.409 3.690 -0.870 H2 5WE 35
5WE H3 H3 H 0 1 N N N N N N -17.484 20.559 -26.903 -5.884 1.369 3.442 H3 5WE 36
5WE H4 H4 H 0 1 N N N N N N -18.752 21.655 -27.549 -4.498 1.281 4.580 H4 5WE 37
5WE H5 H5 H 0 1 N N N N N N -19.671 19.970 -28.977 -3.382 -0.398 3.270 H5 5WE 38
5WE H6 H6 H 0 1 N N N N N N -19.052 18.912 -27.664 -5.094 -0.879 3.066 H6 5WE 39
5WE H7 H7 H 0 1 N N N N N N -10.201 19.063 -27.401 1.148 2.684 -1.949 H7 5WE 40
5WE H8 H8 H 0 1 N N N N N N -11.448 19.089 -26.347 1.005 4.190 -2.679 H8 5WE 41
5WE H9 H9 H 0 1 N N N N N N -12.225 16.565 -26.957 1.544 3.342 -0.038 H9 5WE 42
5WE H10 H10 H 0 1 N N N N N N -11.839 15.054 -25.083 3.889 2.649 0.001 H10 5WE 43
5WE H11 H11 H 0 1 N N N N N N -15.367 16.547 -23.139 2.670 -1.459 0.271 H11 5WE 44
5WE H12 H12 H 0 1 N N N N N N -15.740 18.076 -25.017 0.326 -0.765 0.233 H12 5WE 45
5WE H13 H13 H 0 1 N N N N N N -20.029 17.675 -30.137 -3.753 -2.525 1.376 H13 5WE 46
5WE H14 H14 H 0 1 N N N N N N -20.371 15.547 -30.625 -5.481 -2.598 -1.139 H14 5WE 47
5WE H15 H15 H 0 1 N N N N N N -18.811 15.817 -31.474 -3.719 -2.849 -1.082 H15 5WE 48
5WE H16 H16 H 0 1 N N N N N N -16.232 21.861 -28.552 -4.560 3.234 2.680 H16 5WE 49
5WE H17 H17 H 0 1 N N N N N N -17.612 21.886 -29.702 -3.018 2.394 3.041 H17 5WE 50
5WE H18 H18 H 0 1 N N N N N N -16.370 20.045 -30.565 -4.868 2.071 0.683 H18 5WE 51
5WE H19 H19 H 0 1 N N N N N N -11.275 14.960 -22.831 4.458 -1.843 0.292 H19 5WE 52
5WE H20 H20 H 0 1 N N N N N N -9.680 11.814 -19.761 8.653 -3.974 0.418 H20 5WE 53
5WE H21 H21 H 0 1 N N N N N N -11.961 10.884 -19.111 10.015 -1.821 0.269 H21 5WE 54
5WE C1 C24 C 0 1 N N N N N N ? ? ? -4.874 -4.442 -0.205 C1 5WE 55
5WE N2 N8 N 0 1 N N N N N N ? ? ? -4.944 -5.214 -1.452 N2 5WE 56
5WE C8 C25 C 0 1 N N N N N N ? ? ? -3.652 -5.200 -2.153 C8 5WE 57
5WE C14 C26 C 0 1 N N N N N N ? ? ? -5.388 -6.590 -1.196 C14 5WE 58
5WE H22 H22 H 0 1 N N N N N N -19.234 16.805 -28.781 -5.514 -2.274 1.319 H22 5WE 59
5WE H23 H23 H 0 1 N N N N N N ? ? ? -4.046 -4.807 0.403 H23 5WE 60
5WE H24 H24 H 0 1 N N N N N N ? ? ? -5.807 -4.557 0.346 H24 5WE 61
5WE H25 H25 H 0 1 N N N N N N ? ? ? -2.887 -5.639 -1.513 H25 5WE 62
5WE H26 H26 H 0 1 N N N N N N ? ? ? -3.732 -5.779 -3.073 H26 5WE 63
5WE H27 H27 H 0 1 N N N N N N ? ? ? -3.380 -4.172 -2.393 H27 5WE 64
5WE H28 H28 H 0 1 N N N N N N ? ? ? -6.378 -6.573 -0.740 H28 5WE 65
5WE H29 H29 H 0 1 N N N N N N ? ? ? -5.431 -7.140 -2.136 H29 5WE 66
5WE H30 H30 H 0 1 N N N N N N ? ? ? -4.686 -7.079 -0.521 H30 5WE 67
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5WE O37 C30 DOUB N N 1
5WE C32 C31 SING N N 2
5WE C2 C3 DOUB Y N 3
5WE C2 N1 SING Y N 4
5WE C3 N6 SING Y N 5
5WE C30 C31 SING N N 6
5WE C30 N14 SING N N 7
5WE C10 N14 SING N N 8
5WE C10 C11 SING N N 9
5WE C10 C7 SING N N 10
5WE N14 C13 SING N N 11
5WE N1 C4 DOUB Y N 12
5WE N6 C7 SING Y N 13
5WE N6 C5 SING Y N 14
5WE C11 C12 SING N N 15
5WE C7 N8 DOUB Y N 16
5WE C13 C12 SING N N 17
5WE C4 C5 SING Y N 18
5WE C4 N15 SING N N 19
5WE C5 C9 DOUB Y N 20
5WE N8 C9 SING Y N 21
5WE C9 C16 SING N N 22
5WE C17 C16 DOUB Y N 23
5WE C17 C18 SING Y N 24
5WE C16 C21 SING Y N 25
5WE C18 C19 DOUB Y N 26
5WE C21 C20 DOUB Y N 27
5WE C20 C19 SING Y N 28
5WE C19 C22 SING N N 29
5WE C22 N23 SING N N 30
5WE C22 O24 DOUB N N 31
5WE N23 C25 SING N N 32
5WE C25 N29 DOUB Y N 33
5WE C25 S26 SING Y N 34
5WE N29 C28 SING Y N 35
5WE S26 C27 SING Y N 36
5WE C28 C27 DOUB Y N 37
5WE C2 H1 SING N N 38
5WE C3 H2 SING N N 39
5WE C12 H3 SING N N 40
5WE C12 H4 SING N N 41
5WE C13 H5 SING N N 42
5WE C13 H6 SING N N 43
5WE N15 H7 SING N N 44
5WE N15 H8 SING N N 45
5WE C17 H9 SING N N 46
5WE C18 H10 SING N N 47
5WE C20 H11 SING N N 48
5WE C21 H12 SING N N 49
5WE C31 H13 SING N N 50
5WE C32 H14 SING N N 51
5WE C32 H15 SING N N 52
5WE C11 H16 SING N N 53
5WE C11 H17 SING N N 54
5WE C10 H18 SING N N 55
5WE N23 H19 SING N N 56
5WE C28 H20 SING N N 57
5WE C27 H21 SING N N 58
5WE C32 C1 SING N N 59
5WE C1 N2 SING N N 60
5WE N2 C8 SING N N 61
5WE N2 C14 SING N N 62
5WE C31 H22 SING N N 63
5WE C1 H23 SING N N 64
5WE C1 H24 SING N N 65
5WE C8 H25 SING N N 66
5WE C8 H26 SING N N 67
5WE C8 H27 SING N N 68
5WE C14 H28 SING N N 69
5WE C14 H29 SING N N 70
5WE C14 H30 SING N N 71
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5WE InChI InChI 1.03 InChI=1S/C26H30N8O2S/c1-32(2)13-4-6-20(35)33-14-3-5-19(33)24-30-21(22-23(27)28-11-15-34(22)24)17-7-9-18(10-8-17)25(36)31-26-29-12-16-37-26/h7-12,15-16,19H,3-6,13-14H2,1-2H3,(H2,27,28)(H,29,31,36)/t19-/m0/s1
5WE InChIKey InChI 1.03 HUXVNVAKNWKLJM-IBGZPJMESA-N
5WE SMILES_CANONICAL CACTVS 3.385 CN(C)CCCC(=O)N1CCC[C@H]1c2nc(c3ccc(cc3)C(=O)Nc4sccn4)c5n2ccnc5N
5WE SMILES CACTVS 3.385 CN(C)CCCC(=O)N1CCC[CH]1c2nc(c3ccc(cc3)C(=O)Nc4sccn4)c5n2ccnc5N
5WE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 CN(C)CCCC(=O)N1CCC[C@H]1c2nc(c3n2ccnc3N)c4ccc(cc4)C(=O)Nc5nccs5
5WE SMILES "OpenEye OEToolkits" 2.0.4 CN(C)CCCC(=O)N1CCCC1c2nc(c3n2ccnc3N)c4ccc(cc4)C(=O)Nc5nccs5
#
_pdbx_chem_comp_identifier.comp_id 5WE
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.4
_pdbx_chem_comp_identifier.identifier
4-[8-azanyl-3-[(2~{S})-1-[4-(dimethylamino)butanoyl]pyrrolidin-2-yl]imidazo[1,5-a]pyrazin-1-yl]-~{N}-(1,3-thiazol-2-yl)benzamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5WE 'Create component' 2015-12-15 EBI
5WE 'Initial release' 2016-02-03 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
5WE C2 C 6.144 2.408 1
5WE C3 C 7.443 3.158 2
5WE C4 C 7.443 0.158 3
5WE C5 C 8.742 0.908 4
5WE C12 C 12.057 6.252 5
5WE C13 C 10.632 6.718 6
5WE N14 N 9.748 5.506 7
5WE N15 N 7.443 -1.342 8
5WE C16 C 10.627 -0.975 9
5WE C17 C 12.095 -1.284 10
5WE C18 C 12.561 -2.710 11
5WE C19 C 11.559 -3.827 12
5WE C20 C 10.091 -3.517 13
5WE C21 C 9.626 -2.091 14
5WE C22 C 12.025 -5.252 15
5WE O37 O 7.495 4.211 16
5WE C30 C 8.248 5.508 17
5WE C31 C 7.500 6.809 18
5WE C32 C 6.000 6.811 19
5WE C11 C 12.055 4.752 20
5WE C10 C 10.627 4.291 21
5WE C7 C 10.161 2.865 22
5WE N6 N 8.742 2.408 23
5WE N8 N 11.037 1.658 24
5WE C9 C 10.161 0.451 25
5WE N1 N 6.144 0.908 26
5WE O24 O 11.024 -6.369 27
5WE N23 N 13.493 -5.562 28
5WE C25 C 13.959 -6.987 29
5WE N29 N 15.386 -7.449 30
5WE S26 S 13.079 -8.203 31
5WE C28 C 15.389 -8.949 32
5WE C27 C 13.963 -9.415 33
5WE C1 C 5.252 8.112 34
5WE N2 N 3.752 8.114 35
5WE C8 C 3.005 9.415 36
5WE C14 C 3.000 6.816 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
5WE O37 C30 DOUBLE NONE 1
5WE C32 C31 SINGLE NONE 2
5WE C2 C3 DOUBLE NONE 3
5WE C2 N1 SINGLE NONE 4
5WE C3 N6 SINGLE NONE 5
5WE C30 C31 SINGLE NONE 6
5WE C30 N14 SINGLE NONE 7
5WE C10 N14 SINGLE NONE 8
5WE C10 C11 SINGLE NONE 9
5WE C10 C7 SINGLE BEGINWEDGE 10
5WE N14 C13 SINGLE NONE 11
5WE N1 C4 DOUBLE NONE 12
5WE N6 C7 SINGLE NONE 13
5WE N6 C5 SINGLE NONE 14
5WE C11 C12 SINGLE NONE 15
5WE C7 N8 DOUBLE NONE 16
5WE C13 C12 SINGLE NONE 17
5WE C4 C5 SINGLE NONE 18
5WE C4 N15 SINGLE NONE 19
5WE C5 C9 DOUBLE NONE 20
5WE N8 C9 SINGLE NONE 21
5WE C9 C16 SINGLE NONE 22
5WE C17 C16 DOUBLE NONE 23
5WE C17 C18 SINGLE NONE 24
5WE C16 C21 SINGLE NONE 25
5WE C18 C19 DOUBLE NONE 26
5WE C21 C20 DOUBLE NONE 27
5WE C20 C19 SINGLE NONE 28
5WE C19 C22 SINGLE NONE 29
5WE C22 N23 SINGLE NONE 30
5WE C22 O24 DOUBLE NONE 31
5WE N23 C25 SINGLE NONE 32
5WE C25 N29 DOUBLE NONE 33
5WE C25 S26 SINGLE NONE 34
5WE N29 C28 SINGLE NONE 35
5WE S26 C27 SINGLE NONE 36
5WE C28 C27 DOUBLE NONE 37
5WE C32 C1 SINGLE NONE 38
5WE C1 N2 SINGLE NONE 39
5WE N2 C8 SINGLE NONE 40
5WE N2 C14 SINGLE NONE 41
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
5WE MurckoScaffold S1 scaffold 'O=C(Nc1nccs1)c1ccc(-c2nc([C@@H]3CCCN3)n3ccncc23)cc1' InChI=1S/C20H18N6OS/c27-19(25-20-23-9-11-28-20)14-5-3-13(4-6-14)17-16-12-21-8-10-26(16)18(24-17)15-2-1-7-22-15/h3-6,8-12,15,22H,1-2,7H2,(H,23,25,27)/t15-/m0/s1 TZZGRDJXCYPYIO-HNNXBMFYSA-N
5WE amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
5WE imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
5WE phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
5WE pyrazine F4 fragment c1cnccn1 InChI=1S/C4H4N2/c1-2-6-4-3-5-1/h1-4H KYQCOXFCLRTKLS-UHFFFAOYSA-N
5WE thiazole F5 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
5WE Z1203191681 F6 fragment 'CC(=O)NCc1ncc[nH]1' InChI=1S/C6H9N3O/c1-5(10)9-4-6-7-2-3-8-6/h2-3H,4H2,1H3,(H,7,8)(H,9,10) SXKAQLCLHGQXHB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
5WE C2 S1 1
5WE C3 S1 1
5WE C4 S1 1
5WE C5 S1 1
5WE C12 S1 1
5WE C13 S1 1
5WE N14 S1 1
5WE C16 S1 1
5WE C17 S1 1
5WE C18 S1 1
5WE C19 S1 1
5WE C20 S1 1
5WE C21 S1 1
5WE C22 S1 1
5WE C11 S1 1
5WE C10 S1 1
5WE C7 S1 1
5WE N6 S1 1
5WE N8 S1 1
5WE C9 S1 1
5WE N1 S1 1
5WE O24 S1 1
5WE N23 S1 1
5WE C25 S1 1
5WE N29 S1 1
5WE S26 S1 1
5WE C28 S1 1
5WE C27 S1 1
5WE N14 F1 1
5WE C30 F1 1
5WE O37 F1 1
5WE C31 F1 1
5WE N23 F1 2
5WE C22 F1 2
5WE O24 F1 2
5WE C19 F1 2
5WE C5 F2 1
5WE C9 F2 1
5WE N8 F2 1
5WE C7 F2 1
5WE N6 F2 1
5WE C16 F3 1
5WE C17 F3 1
5WE C18 F3 1
5WE C19 F3 1
5WE C20 F3 1
5WE C21 F3 1
5WE C2 F4 1
5WE C3 F4 1
5WE N6 F4 1
5WE C5 F4 1
5WE C4 F4 1
5WE N1 F4 1
5WE C27 F5 1
5WE C28 F5 1
5WE N29 F5 1
5WE C25 F5 1
5WE S26 F5 1
5WE C31 F6 1
5WE C30 F6 1
5WE O37 F6 1
5WE N14 F6 1
5WE C10 F6 1
5WE C7 F6 1
5WE N6 F6 1
5WE C5 F6 1
5WE C9 F6 1
5WE N8 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 5WE
_pdbe_chem_comp_rdkit_properties.exactmw 518.221
_pdbe_chem_comp_rdkit_properties.amw 518.647
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 67
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.346
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 261.027
_pdbe_chem_comp_rdkit_properties.tpsa 121.750
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.228
_pdbe_chem_comp_rdkit_properties.CrippenMR 139.774
_pdbe_chem_comp_rdkit_properties.chi0v 18.619
_pdbe_chem_comp_rdkit_properties.chi1v 10.408
_pdbe_chem_comp_rdkit_properties.chi2v 4.908
_pdbe_chem_comp_rdkit_properties.chi3v 4.908
_pdbe_chem_comp_rdkit_properties.chi4v 3.299
_pdbe_chem_comp_rdkit_properties.chi0n 47.802
_pdbe_chem_comp_rdkit_properties.chi1n 24.433
_pdbe_chem_comp_rdkit_properties.chi2n 4.349
_pdbe_chem_comp_rdkit_properties.chi3n 4.349
_pdbe_chem_comp_rdkit_properties.chi4n 2.896
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.830
_pdbe_chem_comp_rdkit_properties.kappa1 7.608
_pdbe_chem_comp_rdkit_properties.kappa2 10.651
_pdbe_chem_comp_rdkit_properties.kappa3 5.182
_pdbe_chem_comp_rdkit_properties.Phi 2.190
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
5WE UniChem PDBe 5WE
5WE UniChem ZINC ZINC000263620535
5WE UniChem PubChem 137348408
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
5WE C2 -0.916 -4.182 0.840 ETKDGv3 1
5WE C3 -1.568 -3.341 0.021 ETKDGv3 2
5WE C4 1.270 -3.266 0.324 ETKDGv3 3
5WE C5 0.587 -2.258 -0.510 ETKDGv3 4
5WE C12 -3.520 0.141 -3.869 ETKDGv3 5
5WE C13 -3.360 1.202 -2.789 ETKDGv3 6
5WE N14 -2.887 0.499 -1.609 ETKDGv3 7
5WE N15 2.693 -3.371 0.386 ETKDGv3 8
5WE C16 2.275 -0.417 -0.835 ETKDGv3 9
5WE C17 2.888 0.162 -1.879 ETKDGv3 10
5WE C18 4.165 0.881 -1.690 ETKDGv3 11
5WE C19 4.712 0.999 -0.465 ETKDGv3 12
5WE C20 4.016 0.377 0.693 ETKDGv3 13
5WE C21 2.864 -0.281 0.519 ETKDGv3 14
5WE C22 5.994 1.721 -0.276 ETKDGv3 15
5WE O37 -2.944 2.380 -0.232 ETKDGv3 16
5WE C30 -2.849 1.124 -0.310 ETKDGv3 17
5WE C31 -2.613 0.324 0.949 ETKDGv3 18
5WE C32 -3.426 0.830 2.161 ETKDGv3 19
5WE C11 -2.689 -1.052 -3.406 ETKDGv3 20
5WE C10 -2.552 -0.894 -1.890 ETKDGv3 21
5WE C7 -1.155 -1.222 -1.430 ETKDGv3 22
5WE N6 -0.793 -2.411 -0.740 ETKDGv3 23
5WE N8 -0.138 -0.442 -1.638 ETKDGv3 24
5WE C9 0.981 -1.094 -1.026 ETKDGv3 25
5WE N1 0.529 -4.150 0.940 ETKDGv3 26
5WE O24 6.756 1.901 -1.265 ETKDGv3 27
5WE N23 6.354 2.249 1.011 ETKDGv3 28
5WE C25 7.691 2.616 1.379 ETKDGv3 29
5WE N29 7.951 3.237 2.485 ETKDGv3 30
5WE S26 9.169 2.225 0.457 ETKDGv3 31
5WE C28 9.356 3.470 2.677 ETKDGv3 32
5WE C27 10.153 3.009 1.716 ETKDGv3 33
5WE H1 -1.473 -4.904 1.423 ETKDGv3 34
5WE H2 -2.647 -3.363 -0.050 ETKDGv3 35
5WE H3 -4.589 -0.160 -3.939 ETKDGv3 36
5WE H4 -3.179 0.514 -4.859 ETKDGv3 37
5WE H5 -4.335 1.695 -2.584 ETKDGv3 38
5WE H6 -2.608 1.962 -3.095 ETKDGv3 39
5WE H7 3.140 -4.059 1.033 ETKDGv3 40
5WE H8 3.303 -2.860 -0.288 ETKDGv3 41
5WE H9 2.461 0.102 -2.873 ETKDGv3 42
5WE H10 4.640 1.323 -2.558 ETKDGv3 43
5WE H11 4.437 0.436 1.687 ETKDGv3 44
5WE H12 2.363 -0.715 1.375 ETKDGv3 45
5WE H13 -1.529 0.399 1.185 ETKDGv3 46
5WE H14 -2.733 0.843 3.031 ETKDGv3 47
5WE H15 -3.751 1.884 2.050 ETKDGv3 48
5WE H16 -3.185 -2.012 -3.667 ETKDGv3 49
5WE H17 -1.697 -1.014 -3.911 ETKDGv3 50
5WE H18 -3.293 -1.551 -1.389 ETKDGv3 51
5WE H19 5.600 2.419 1.713 ETKDGv3 52
5WE H20 9.736 3.984 3.549 ETKDGv3 53
5WE H21 11.231 3.101 1.712 ETKDGv3 54
5WE C1 -4.610 -0.082 2.569 ETKDGv3 55
5WE N2 -5.815 -0.012 1.709 ETKDGv3 56
5WE C8 -5.704 -0.770 0.455 ETKDGv3 57
5WE C14 -6.311 1.353 1.482 ETKDGv3 58
5WE H22 -2.822 -0.751 0.784 ETKDGv3 59
5WE H23 -4.260 -1.135 2.658 ETKDGv3 60
5WE H24 -4.914 0.207 3.598 ETKDGv3 61
5WE H25 -5.166 -0.195 -0.322 ETKDGv3 62
5WE H26 -6.722 -0.991 0.070 ETKDGv3 63
5WE H27 -5.194 -1.744 0.617 ETKDGv3 64
5WE H28 -5.679 1.898 0.747 ETKDGv3 65
5WE H29 -6.340 1.920 2.437 ETKDGv3 66
5WE H30 -7.349 1.310 1.087 ETKDGv3 67
#