data_60Y
#
_chem_comp.id 60Y
_chem_comp.name
3-{5-[(2E,4aR,7aR)-6-(5-fluoropyrimidin-2-yl)-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophen-3-yl}benzonitrile
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H18 F N7 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2016-01-12
_chem_comp.pdbx_modified_date 2016-03-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 447.488
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 60Y
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5HD0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
60Y C20 C1 C 0 1 Y N N N N N 27.271 11.335 18.721 -4.247 -0.381 -1.629 C20 60Y 1
60Y C13 C2 C 0 1 Y N N N N N 15.373 9.818 21.365 5.812 -2.779 -0.091 C13 60Y 2
60Y C11 C3 C 0 1 Y N N N N N 17.900 10.496 21.435 4.027 -0.845 -0.585 C11 60Y 3
60Y C17 C4 C 0 1 Y N N N N N 28.432 10.530 21.113 -6.287 -1.449 -0.076 C17 60Y 4
60Y C10 C5 C 0 1 N N N N N N 20.267 10.157 20.722 1.732 -0.393 -0.900 C10 60Y 5
60Y C12 C6 C 0 1 Y N N N N N 16.266 9.191 20.536 4.459 -3.070 -0.184 C12 60Y 6
60Y C18 C7 C 0 1 Y N N N N N 29.237 10.980 20.064 -6.517 -1.115 -1.413 C18 60Y 7
60Y C15 C8 C 0 1 Y N N N N N 26.458 10.893 19.772 -4.005 -0.710 -0.296 C15 60Y 8
60Y C14 C9 C 0 1 Y N N N N N 15.775 10.805 22.205 6.219 -1.462 -0.255 C14 60Y 9
60Y C16 C10 C 0 1 Y N N N N N 27.049 10.480 20.962 -5.025 -1.245 0.483 C16 60Y 10
60Y C19 C11 C 0 1 Y N N N N N 28.651 11.372 18.869 -5.498 -0.585 -2.178 C19 60Y 11
60Y N6 N1 N 0 1 N N N N N N 29.462 9.760 23.345 -8.182 -2.436 1.349 N6 60Y 12
60Y C21 C12 C 0 1 N N N N N N 29.024 10.109 22.354 -7.344 -2.000 0.719 C21 60Y 13
60Y C1 C13 C 0 1 Y N N N N N 24.973 10.948 19.681 -2.660 -0.490 0.291 C1 60Y 14
60Y C C14 C 0 1 Y N N N N N 24.266 11.314 18.559 -2.364 -0.793 1.569 C 60Y 15
60Y C2 C15 C 0 1 Y N N N N N 24.080 10.665 20.799 -1.597 0.042 -0.437 C2 60Y 16
60Y C3 C16 C 0 1 Y N N N N N 22.776 10.837 20.462 -0.461 0.172 0.244 C3 60Y 17
60Y S S1 S 0 1 Y N N N N N 22.576 11.324 18.825 -0.683 -0.393 1.894 S 60Y 18
60Y C4 C17 C 0 1 N N R N N N 21.565 10.689 21.350 0.826 0.719 -0.317 C4 60Y 19
60Y N3 N2 N 0 1 N N N N N N 19.221 10.808 21.520 3.103 0.155 -0.840 N3 60Y 20
60Y N5 N3 N 0 1 Y N N N N N 17.065 11.160 22.267 5.311 -0.532 -0.498 N5 60Y 21
60Y F F1 F 0 1 N N N N N N 14.082 9.397 21.405 6.713 -3.754 0.159 F 60Y 22
60Y N4 N4 N 0 1 Y N N N N N 17.562 9.534 20.556 3.604 -2.091 -0.429 N4 60Y 23
60Y C9 C18 C 0 1 N N N N N N 19.716 11.894 22.363 3.148 1.195 0.204 C9 60Y 24
60Y C8 C19 C 0 1 N N R N N N 21.141 12.105 21.862 1.726 1.333 0.776 C8 60Y 25
60Y C7 C20 C 0 1 N N N N N N 22.009 12.616 22.995 1.399 2.773 1.011 C7 60Y 26
60Y O O1 O 0 1 N N N N N N 22.269 13.802 23.094 1.816 3.296 2.022 O 60Y 27
60Y N2 N5 N 0 1 N N N N N N 22.532 11.675 23.864 0.671 3.519 0.169 N2 60Y 28
60Y C6 C21 C 0 1 N N N N N N 23.224 12.167 25.068 0.447 4.936 0.464 C6 60Y 29
60Y C5 C22 C 0 1 N N N N N N 22.410 10.317 23.639 0.130 2.963 -0.978 C5 60Y 30
60Y N1 N6 N 0 1 N N N N N N 22.784 9.508 24.550 -0.787 3.584 -1.663 N1 60Y 31
60Y N N7 N 0 1 N N N N N N 21.838 9.837 22.523 0.589 1.715 -1.372 N 60Y 32
60Y H1 H1 H 0 1 N N N N N N 26.822 11.649 17.790 -3.456 0.039 -2.233 H1 60Y 33
60Y H2 H2 H 0 1 N N N N N N 20.193 10.446 19.663 1.659 -1.296 -0.294 H2 60Y 34
60Y H3 H3 H 0 1 N N N N N N 20.206 9.062 20.809 1.454 -0.605 -1.932 H3 60Y 35
60Y H4 H4 H 0 1 N N N N N N 15.925 8.418 19.864 4.108 -4.084 -0.058 H4 60Y 36
60Y H5 H5 H 0 1 N N N N N N 30.310 11.023 20.182 -7.493 -1.272 -1.847 H5 60Y 37
60Y H6 H6 H 0 1 N N N N N N 15.050 11.308 22.828 7.265 -1.200 -0.184 H6 60Y 38
60Y H7 H7 H 0 1 N N N N N N 26.432 10.119 21.772 -4.842 -1.501 1.516 H7 60Y 39
60Y H8 H8 H 0 1 N N N N N N 29.271 11.707 18.051 -5.680 -0.328 -3.212 H8 60Y 40
60Y H9 H9 H 0 1 N N N N N N 24.727 11.567 17.615 -3.054 -1.216 2.284 H9 60Y 41
60Y H10 H10 H 0 1 N N N N N N 24.416 10.356 21.778 -1.688 0.326 -1.474 H10 60Y 42
60Y H11 H11 H 0 1 N N N N N N 19.112 12.804 22.229 3.838 0.898 0.993 H11 60Y 43
60Y H12 H12 H 0 1 N N N N N N 19.710 11.603 23.424 3.468 2.142 -0.231 H12 60Y 44
60Y H13 H13 H 0 1 N N N N N N 21.147 12.818 21.025 1.636 0.764 1.702 H13 60Y 45
60Y H14 H14 H 0 1 N N N N N N 23.584 11.312 25.660 1.243 5.531 0.017 H14 60Y 46
60Y H15 H15 H 0 1 N N N N N N 24.078 12.792 24.770 -0.513 5.246 0.051 H15 60Y 47
60Y H16 H16 H 0 1 N N N N N N 22.526 12.764 25.674 0.444 5.087 1.543 H16 60Y 48
60Y H17 H17 H 0 1 N N N N N N 23.137 9.986 25.354 -1.103 4.453 -1.373 H17 60Y 49
60Y H18 H18 H 0 1 N N N N N N 21.589 8.869 22.486 0.759 1.510 -2.305 H18 60Y 50
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
60Y C S SING Y N 1
60Y C C1 DOUB Y N 2
60Y C20 C19 DOUB Y N 3
60Y C20 C15 SING Y N 4
60Y S C3 SING Y N 5
60Y C19 C18 SING Y N 6
60Y C1 C15 SING N N 7
60Y C1 C2 SING Y N 8
60Y C15 C16 DOUB Y N 9
60Y C18 C17 DOUB Y N 10
60Y C3 C2 DOUB Y N 11
60Y C3 C4 SING N N 12
60Y C12 N4 DOUB Y N 13
60Y C12 C13 SING Y N 14
60Y N4 C11 SING Y N 15
60Y C10 C4 SING N N 16
60Y C10 N3 SING N N 17
60Y C16 C17 SING Y N 18
60Y C17 C21 SING N N 19
60Y C4 C8 SING N N 20
60Y C4 N SING N N 21
60Y C13 F SING N N 22
60Y C13 C14 DOUB Y N 23
60Y C11 N3 SING N N 24
60Y C11 N5 DOUB Y N 25
60Y N3 C9 SING N N 26
60Y C8 C9 SING N N 27
60Y C8 C7 SING N N 28
60Y C14 N5 SING Y N 29
60Y C21 N6 TRIP N N 30
60Y N C5 SING N N 31
60Y C7 O DOUB N N 32
60Y C7 N2 SING N N 33
60Y C5 N2 SING N N 34
60Y C5 N1 DOUB N N 35
60Y N2 C6 SING N N 36
60Y C20 H1 SING N N 37
60Y C10 H2 SING N N 38
60Y C10 H3 SING N N 39
60Y C12 H4 SING N N 40
60Y C18 H5 SING N N 41
60Y C14 H6 SING N N 42
60Y C16 H7 SING N N 43
60Y C19 H8 SING N N 44
60Y C H9 SING N N 45
60Y C2 H10 SING N N 46
60Y C9 H11 SING N N 47
60Y C9 H12 SING N N 48
60Y C8 H13 SING N N 49
60Y C6 H14 SING N N 50
60Y C6 H15 SING N N 51
60Y C6 H16 SING N N 52
60Y N1 H17 SING N N 53
60Y N H18 SING N N 54
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
60Y SMILES ACDLabs 12.01 "c1ccc(C#N)cc1c5cc(C34CN(c2ncc(F)cn2)CC3C(=O)N(C)\C(=N)N4)sc5"
60Y InChI InChI 1.03 InChI=1S/C22H18FN7OS/c1-29-19(31)17-10-30(21-26-8-16(23)9-27-21)12-22(17,28-20(29)25)18-6-15(11-32-18)14-4-2-3-13(5-14)7-24/h2-6,8-9,11,17H,10,12H2,1H3,(H2,25,28)/t17-,22-/m0/s1
60Y InChIKey InChI 1.03 PTLJUNIICOHEHE-JTSKRJEESA-N
60Y SMILES_CANONICAL CACTVS 3.385 "CN1C(=N)N[C@]2(CN(C[C@H]2C1=O)c3ncc(F)cn3)c4scc(c4)c5cccc(c5)C#N"
60Y SMILES CACTVS 3.385 "CN1C(=N)N[C]2(CN(C[CH]2C1=O)c3ncc(F)cn3)c4scc(c4)c5cccc(c5)C#N"
60Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "[H]/N=C/1\N[C@]2(CN(C[C@H]2C(=O)N1C)c3ncc(cn3)F)c4cc(cs4)c5cccc(c5)C#N"
60Y SMILES "OpenEye OEToolkits" 2.0.4 "CN1C(=O)C2CN(CC2(NC1=N)c3cc(cs3)c4cccc(c4)C#N)c5ncc(cn5)F"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
60Y "SYSTEMATIC NAME" ACDLabs 12.01 3-{5-[(2E,4aR,7aR)-6-(5-fluoropyrimidin-2-yl)-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophen-3-yl}benzonitrile
60Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 3-[5-[(4~{a}~{R},7~{a}~{R})-2-azanylidene-6-(5-fluoranylpyrimidin-2-yl)-3-methyl-4-oxidanylidene-1,4~{a},5,7-tetrahydropyrrolo[3,4-d]pyrimidin-7~{a}-yl]thiophen-3-yl]benzenecarbonitrile
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
60Y 'Create component' 2016-01-12 RCSB
60Y 'Initial release' 2016-03-16 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
60Y C20 C 8.724 4.464 1
60Y C13 C 14.497 -2.678 2
60Y C11 C 11.497 -2.678 3
60Y C17 C 11.708 4.151 4
60Y C10 C 9.122 -1.471 5
60Y C12 C 13.747 -1.379 6
60Y C18 C 11.098 5.521 7
60Y C15 C 9.334 3.094 8
60Y C14 C 13.747 -3.977 9
60Y C16 C 10.826 2.937 10
60Y C19 C 9.606 5.678 11
60Y N6 N 14.691 3.837 12
60Y C21 C 13.199 3.994 13
60Y C1 C 8.453 1.880 14
60Y C C 6.952 1.880 15
60Y C2 C 8.916 0.454 16
60Y C3 C 7.702 -0.428 17
60Y S S 6.489 0.454 18
60Y C4 C 7.702 -1.928 19
60Y N3 N 9.997 -2.678 20
60Y N5 N 12.247 -3.977 21
60Y F F 15.997 -2.678 22
60Y N4 N 12.247 -1.379 23
60Y C9 C 9.122 -3.885 24
60Y C8 C 7.702 -3.428 25
60Y C7 C 6.404 -4.178 26
60Y O O 6.404 -5.678 27
60Y N2 N 5.104 -3.428 28
60Y C6 C 3.805 -4.178 29
60Y C5 C 5.104 -1.928 30
60Y N1 N 3.805 -1.178 31
60Y N N 6.404 -1.178 32
60Y H17 H 3.805 0.322 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
60Y C S SINGLE NONE 1
60Y C C1 DOUBLE NONE 2
60Y C20 C19 DOUBLE NONE 3
60Y C20 C15 SINGLE NONE 4
60Y S C3 SINGLE NONE 5
60Y C19 C18 SINGLE NONE 6
60Y C1 C15 SINGLE NONE 7
60Y C1 C2 SINGLE NONE 8
60Y C15 C16 DOUBLE NONE 9
60Y C18 C17 DOUBLE NONE 10
60Y C3 C2 DOUBLE NONE 11
60Y C4 C3 SINGLE BEGINDASH 12
60Y C12 N4 SINGLE NONE 13
60Y C12 C13 DOUBLE NONE 14
60Y N4 C11 DOUBLE NONE 15
60Y C10 C4 SINGLE NONE 16
60Y C10 N3 SINGLE NONE 17
60Y C16 C17 SINGLE NONE 18
60Y C17 C21 SINGLE NONE 19
60Y C4 C8 SINGLE NONE 20
60Y C4 N SINGLE NONE 21
60Y C13 F SINGLE NONE 22
60Y C13 C14 SINGLE NONE 23
60Y C11 N3 SINGLE NONE 24
60Y C11 N5 SINGLE NONE 25
60Y N3 C9 SINGLE NONE 26
60Y C8 C9 SINGLE NONE 27
60Y C8 C7 SINGLE NONE 28
60Y C14 N5 DOUBLE NONE 29
60Y C21 N6 TRIPLE NONE 30
60Y N C5 SINGLE ENDUPRIGHT 31
60Y C7 O DOUBLE NONE 32
60Y C7 N2 SINGLE NONE 33
60Y C5 N2 SINGLE ENDUPRIGHT 34
60Y C5 N1 DOUBLE NONE 35
60Y N2 C6 SINGLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
60Y MurckoScaffold S1 scaffold 'N=C1NC(=O)[C@@H]2CN(c3ncccn3)C[C@]2(c2cc(-c3ccccc3)cs2)N1' InChI=1S/C20H18N6OS/c21-18-24-17(27)15-10-26(19-22-7-4-8-23-19)12-20(15,25-18)16-9-14(11-28-16)13-5-2-1-3-6-13/h1-9,11,15H,10,12H2,(H3,21,24,25,27)/t15-,20-/m0/s1 DOASHLNDHOBUSI-YWZLYKJASA-N
60Y amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
60Y phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
60Y pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
60Y thiophen F4 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
60Y Z54628578 F5 fragment CNc1ncccn1 InChI=1S/C5H7N3/c1-6-5-7-3-2-4-8-5/h2-4H,1H3,(H,6,7,8) BQNXHDSGGRTFNX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
60Y C20 S1 1
60Y C13 S1 1
60Y C11 S1 1
60Y C17 S1 1
60Y C10 S1 1
60Y C12 S1 1
60Y C18 S1 1
60Y C15 S1 1
60Y C14 S1 1
60Y C16 S1 1
60Y C19 S1 1
60Y C1 S1 1
60Y C S1 1
60Y C2 S1 1
60Y C3 S1 1
60Y S S1 1
60Y C4 S1 1
60Y N3 S1 1
60Y N5 S1 1
60Y N4 S1 1
60Y C9 S1 1
60Y C8 S1 1
60Y C7 S1 1
60Y O S1 1
60Y N2 S1 1
60Y C5 S1 1
60Y N1 S1 1
60Y N S1 1
60Y N2 F1 1
60Y C7 F1 1
60Y O F1 1
60Y C8 F1 1
60Y C20 F2 1
60Y C19 F2 1
60Y C18 F2 1
60Y C17 F2 1
60Y C16 F2 1
60Y C15 F2 1
60Y C13 F3 1
60Y C12 F3 1
60Y N4 F3 1
60Y C11 F3 1
60Y N5 F3 1
60Y C14 F3 1
60Y C F4 1
60Y C1 F4 1
60Y C2 F4 1
60Y C3 F4 1
60Y S F4 1
60Y C10 F5 1
60Y N3 F5 1
60Y C11 F5 1
60Y N4 F5 1
60Y C12 F5 1
60Y C13 F5 1
60Y C14 F5 1
60Y N5 F5 1
60Y C9 F5 2
60Y N3 F5 2
60Y C11 F5 2
60Y N4 F5 2
60Y C12 F5 2
60Y C13 F5 2
60Y C14 F5 2
60Y N5 F5 2
#
_pdbe_chem_comp_rdkit_properties.comp_id 60Y
_pdbe_chem_comp_rdkit_properties.exactmw 447.128
_pdbe_chem_comp_rdkit_properties.amw 447.499
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 32
_pdbe_chem_comp_rdkit_properties.NumAtoms 50
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.227
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 212.413
_pdbe_chem_comp_rdkit_properties.tpsa 109
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.674
_pdbe_chem_comp_rdkit_properties.CrippenMR 114.795
_pdbe_chem_comp_rdkit_properties.chi0v 16.141
_pdbe_chem_comp_rdkit_properties.chi1v 9.248
_pdbe_chem_comp_rdkit_properties.chi2v 5.169
_pdbe_chem_comp_rdkit_properties.chi3v 5.169
_pdbe_chem_comp_rdkit_properties.chi4v 3.708
_pdbe_chem_comp_rdkit_properties.chi0n 33.325
_pdbe_chem_comp_rdkit_properties.chi1n 17.326
_pdbe_chem_comp_rdkit_properties.chi2n 4.261
_pdbe_chem_comp_rdkit_properties.chi3n 4.261
_pdbe_chem_comp_rdkit_properties.chi4n 2.857
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.840
_pdbe_chem_comp_rdkit_properties.kappa1 8.256
_pdbe_chem_comp_rdkit_properties.kappa2 7.387
_pdbe_chem_comp_rdkit_properties.kappa3 3.094
_pdbe_chem_comp_rdkit_properties.Phi 1.906
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
60Y UniChem ChEMBL CHEMBL2178718
60Y UniChem PDBe 60Y
60Y UniChem ZINC ZINC000095576320
60Y UniChem 'PubChem TPHARMA' 163471627
60Y UniChem Nikkaji J3.604.700C
60Y UniChem BindingDb 50398693
60Y UniChem PubChem 71457203
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
60Y C20 5.115 -2.125 0.723 ETKDGv3 1
60Y C13 -5.911 -3.298 -0.251 ETKDGv3 2
60Y C11 -3.746 -1.561 -0.284 ETKDGv3 3
60Y C17 6.224 0.242 -0.332 ETKDGv3 4
60Y C10 -1.969 -0.187 0.903 ETKDGv3 5
60Y C12 -5.390 -2.880 -1.407 ETKDGv3 6
60Y C18 7.026 -0.726 0.132 ETKDGv3 7
60Y C15 4.211 -1.060 0.207 ETKDGv3 8
60Y C14 -5.312 -2.818 1.006 ETKDGv3 9
60Y C16 4.754 0.068 -0.292 ETKDGv3 10
60Y C19 6.443 -1.964 0.685 ETKDGv3 11
60Y N6 7.236 2.426 -1.308 ETKDGv3 12
60Y C21 6.785 1.453 -0.873 ETKDGv3 13
60Y C1 2.738 -1.242 0.246 ETKDGv3 14
60Y C 2.149 -2.438 0.143 ETKDGv3 15
60Y C2 1.778 -0.113 0.383 ETKDGv3 16
60Y C3 0.491 -0.473 0.413 ETKDGv3 17
60Y S 0.387 -2.241 0.202 ETKDGv3 18
60Y C4 -0.683 0.499 0.413 ETKDGv3 19
60Y N3 -2.626 -0.665 -0.301 ETKDGv3 20
60Y N5 -4.298 -2.004 0.970 ETKDGv3 21
60Y F -6.968 -4.146 -0.233 ETKDGv3 22
60Y N4 -4.269 -1.981 -1.402 ETKDGv3 23
60Y C9 -2.026 -0.144 -1.518 ETKDGv3 24
60Y C8 -0.998 0.902 -1.056 ETKDGv3 25
60Y C7 -1.570 2.296 -1.213 ETKDGv3 26
60Y O -1.864 2.699 -2.372 ETKDGv3 27
60Y N2 -1.758 3.168 -0.087 ETKDGv3 28
60Y C6 -2.615 4.353 -0.211 ETKDGv3 29
60Y C5 -0.993 2.916 1.104 ETKDGv3 30
60Y N1 -0.820 3.829 2.010 ETKDGv3 31
60Y N -0.371 1.643 1.278 ETKDGv3 32
60Y H1 4.708 -3.032 1.151 ETKDGv3 33
60Y H2 -2.642 0.538 1.411 ETKDGv3 34
60Y H3 -1.760 -1.023 1.605 ETKDGv3 35
60Y H4 -5.807 -3.214 -2.348 ETKDGv3 36
60Y H5 8.104 -0.613 0.109 ETKDGv3 37
60Y H6 -5.712 -3.139 1.958 ETKDGv3 38
60Y H7 4.128 0.854 -0.696 ETKDGv3 39
60Y H8 7.095 -2.739 1.067 ETKDGv3 40
60Y H9 2.660 -3.382 0.008 ETKDGv3 41
60Y H10 2.089 0.921 0.443 ETKDGv3 42
60Y H11 -1.515 -0.971 -2.057 ETKDGv3 43
60Y H12 -2.810 0.285 -2.182 ETKDGv3 44
60Y H13 -0.088 0.846 -1.695 ETKDGv3 45
60Y H14 -1.992 5.245 -0.429 ETKDGv3 46
60Y H15 -3.359 4.222 -1.025 ETKDGv3 47
60Y H16 -3.188 4.513 0.727 ETKDGv3 48
60Y H17 -1.215 4.792 1.945 ETKDGv3 49
60Y H18 0.154 1.471 2.166 ETKDGv3 50
#