data_65P
#
_chem_comp.id 65P
_chem_comp.name
"(2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C31 H32 F2 N2 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2016-01-28
_chem_comp.pdbx_modified_date 2016-12-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 534.594
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 65P
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5HRN
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
65P C13 C1 C 0 1 Y N N N N N -50.291 -20.421 15.492 5.019 -0.925 0.497 C13 65P 1
65P C15 C2 C 0 1 Y N N N N N -50.957 -20.937 14.391 5.906 -1.144 -0.541 C15 65P 2
65P C17 C3 C 0 1 Y N N N N N -50.846 -20.287 13.188 6.694 -0.106 -1.008 C17 65P 3
65P C21 C4 C 0 1 Y N N N N N -49.428 -18.627 14.156 5.698 1.369 0.600 C21 65P 4
65P C28 C5 C 0 1 Y N N N N N -45.513 -15.234 15.467 -0.554 0.277 0.240 C28 65P 5
65P C01 C6 C 0 1 N N N N N N -49.032 -13.519 15.509 0.488 -3.328 0.650 C01 65P 6
65P C05 C7 C 0 1 Y N N N N N -47.915 -14.536 15.621 0.517 -1.822 0.679 C05 65P 7
65P N06 N1 N 0 1 Y N N N N N -48.290 -15.783 15.958 1.584 -1.210 1.149 N06 65P 8
65P C07 C8 C 0 1 Y N N N N N -47.346 -16.732 16.001 1.668 0.113 1.206 C07 65P 9
65P N08 N2 N 0 1 Y N N N N N -47.535 -18.064 16.284 2.646 0.975 1.641 N08 65P 10
65P C09 C9 C 0 1 N N N N N N -48.811 -18.712 16.603 3.941 0.568 2.192 C09 65P 11
65P C12 C10 C 0 1 Y N N N N N -49.517 -19.272 15.390 4.913 0.331 1.065 C12 65P 12
65P F18 F1 F 0 1 N N N N N N -51.478 -20.770 12.093 7.560 -0.319 -2.022 F18 65P 13
65P C19 C11 C 0 1 Y N N N N N -50.094 -19.149 13.076 6.591 1.152 -0.435 C19 65P 14
65P F20 F2 F 0 1 N N N N N N -50.009 -18.537 11.873 7.359 2.167 -0.889 F20 65P 15
65P C23 C12 C 0 1 Y N N N N N -46.293 -18.669 16.300 2.232 2.271 1.484 C23 65P 16
65P C25 C13 C 0 1 Y N N N N N -45.330 -17.779 15.975 1.007 2.295 0.935 C25 65P 17
65P C27 C14 C 0 1 Y N N N N N -46.001 -16.539 15.728 0.599 0.904 0.747 C27 65P 18
65P C29 C15 C 0 1 Y N N N N N -44.041 -15.063 15.266 -1.702 1.071 -0.255 C29 65P 19
65P C30 C16 C 0 1 Y N N N N N -43.272 -14.854 16.415 -1.763 1.455 -1.595 C30 65P 20
65P C32 C17 C 0 1 Y N N N N N -41.915 -14.606 16.304 -2.833 2.194 -2.047 C32 65P 21
65P C34 C18 C 0 1 Y N N N N N -41.330 -14.533 15.049 -3.855 2.562 -1.175 C34 65P 22
65P O35 O1 O 0 1 N N N N N N -39.978 -14.286 15.021 -4.888 3.297 -1.664 O35 65P 23
65P C36 C19 C 0 1 N N N N N N -39.466 -13.825 13.762 -6.089 3.357 -0.894 C36 65P 24
65P C39 C20 C 0 1 N N N N N N -39.878 -14.725 12.622 -5.718 3.706 0.553 C39 65P 25
65P C42 C21 C 0 1 N N N N N N -41.398 -14.752 12.514 -4.888 2.555 1.128 C42 65P 26
65P C45 C22 C 0 1 Y N N N N N -42.076 -14.757 13.874 -3.798 2.180 0.156 C45 65P 27
65P C46 C23 C 0 1 Y N N N N N -43.453 -15.023 13.979 -2.729 1.434 0.614 C46 65P 28
65P C47 C24 C 0 1 N N N N N N -44.275 -15.266 12.732 -2.670 1.017 2.062 C47 65P 29
65P C51 C25 C 0 1 Y N N N N N -46.539 -14.258 15.357 -0.579 -1.118 0.213 C51 65P 30
65P C52 C26 C 0 1 N N S N N N -46.090 -12.825 14.973 -1.785 -1.849 -0.318 C52 65P 31
65P O54 O2 O 0 1 N N N N N N -46.505 -11.850 15.968 -2.117 -2.923 0.564 O54 65P 32
65P C55 C27 C 0 1 N N N N N N -45.857 -11.549 17.243 -3.509 -3.243 0.593 C55 65P 33
65P C56 C28 C 0 1 N N N N N N -46.482 -10.250 17.702 -3.967 -3.652 -0.808 C56 65P 34
65P C60 C29 C 0 1 N N N N N N -44.365 -11.385 17.000 -3.747 -4.400 1.565 C60 65P 35
65P C64 C30 C 0 1 N N N N N N -46.130 -12.660 18.236 -4.304 -2.019 1.053 C64 65P 36
65P C68 C31 C 0 1 N N N N N N -46.561 -12.368 13.596 -1.477 -2.400 -1.686 C68 65P 37
65P O69 O3 O 0 1 N N N N N N -46.886 -13.342 12.791 -1.447 -3.595 -1.864 O69 65P 38
65P O71 O4 O 0 1 N N N N N N -46.638 -11.193 13.301 -1.236 -1.563 -2.708 O71 65P 39
65P H1 H1 H 0 1 N N N N N N -50.375 -20.921 16.446 4.405 -1.735 0.861 H1 65P 40
65P H2 H2 H 0 1 N N N N N N -51.552 -21.834 14.479 5.985 -2.124 -0.986 H2 65P 41
65P H3 H3 H 0 1 N N N N N N -48.841 -17.726 14.052 5.615 2.350 1.045 H3 65P 42
65P H4 H4 H 0 1 N N N N N N -49.994 -14.004 15.733 0.073 -3.702 1.585 H4 65P 43
65P H5 H5 H 0 1 N N N N N N -48.857 -12.702 16.225 -0.131 -3.663 -0.183 H5 65P 44
65P H6 H6 H 0 1 N N N N N N -49.056 -13.112 14.487 1.502 -3.708 0.524 H6 65P 45
65P H7 H7 H 0 1 N N N N N N -49.470 -17.971 17.079 4.323 1.354 2.842 H7 65P 46
65P H8 H8 H 0 1 N N N N N N -48.618 -19.536 17.306 3.819 -0.351 2.766 H8 65P 47
65P H9 H9 H 0 1 N N N N N N -46.117 -19.707 16.539 2.811 3.144 1.748 H9 65P 48
65P H10 H10 H 0 1 N N N N N N -44.268 -17.966 15.914 0.426 3.173 0.694 H10 65P 49
65P H11 H11 H 0 1 N N N N N N -43.737 -14.886 17.389 -0.974 1.173 -2.276 H11 65P 50
65P H12 H12 H 0 1 N N N N N N -41.314 -14.470 17.191 -2.880 2.492 -3.085 H12 65P 51
65P H13 H13 H 0 1 N N N N N N -38.368 -13.797 13.814 -6.747 4.124 -1.300 H13 65P 52
65P H14 H14 H 0 1 N N N N N N -39.850 -12.812 13.572 -6.591 2.390 -0.921 H14 65P 53
65P H15 H15 H 0 1 N N N N N N -39.506 -15.744 12.807 -5.132 4.626 0.571 H15 65P 54
65P H16 H16 H 0 1 N N N N N N -39.451 -14.344 11.682 -6.625 3.837 1.143 H16 65P 55
65P H17 H17 H 0 1 N N N N N N -41.728 -13.862 11.958 -4.441 2.867 2.072 H17 65P 56
65P H18 H18 H 0 1 N N N N N N -41.697 -15.658 11.967 -5.534 1.694 1.299 H18 65P 57
65P H19 H19 H 0 1 N N N N N N -44.271 -16.340 12.493 -3.161 0.052 2.182 H19 65P 58
65P H20 H20 H 0 1 N N N N N N -45.309 -14.932 12.904 -1.629 0.937 2.374 H20 65P 59
65P H21 H21 H 0 1 N N N N N N -43.842 -14.702 11.892 -3.177 1.762 2.675 H21 65P 60
65P H22 H22 H 0 1 N N N N N N -44.990 -12.834 14.949 -2.627 -1.161 -0.384 H22 65P 61
65P H23 H23 H 0 1 N N N N N N -46.043 -9.952 18.666 -3.401 -4.524 -1.136 H23 65P 62
65P H24 H24 H 0 1 N N N N N N -46.290 -9.467 16.954 -5.029 -3.896 -0.787 H24 65P 63
65P H25 H25 H 0 1 N N N N N N -47.567 -10.387 17.820 -3.798 -2.827 -1.501 H25 65P 64
65P H26 H26 H 0 1 N N N N N N -43.861 -11.158 17.951 -3.420 -4.109 2.563 H26 65P 65
65P H27 H27 H 0 1 N N N N N N -43.957 -12.317 16.583 -4.809 -4.644 1.587 H27 65P 66
65P H28 H28 H 0 1 N N N N N N -44.198 -10.561 16.290 -3.180 -5.272 1.237 H28 65P 67
65P H29 H29 H 0 1 N N N N N N -45.639 -12.426 19.192 -4.135 -1.195 0.360 H29 65P 68
65P H30 H30 H 0 1 N N N N N N -47.215 -12.753 18.393 -5.366 -2.263 1.074 H30 65P 69
65P H31 H31 H 0 1 N N N N N N -45.734 -13.608 17.843 -3.978 -1.728 2.051 H31 65P 70
65P H32 H32 H 0 1 N N N N N N -46.965 -11.110 12.413 -1.043 -1.963 -3.567 H32 65P 71
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
65P F20 C19 SING N N 1
65P F18 C17 SING N N 2
65P C42 C39 SING N N 3
65P C42 C45 SING N N 4
65P C39 C36 SING N N 5
65P C47 C46 SING N N 6
65P O69 C68 DOUB N N 7
65P C19 C17 DOUB Y N 8
65P C19 C21 SING Y N 9
65P C17 C15 SING Y N 10
65P O71 C68 SING N N 11
65P C68 C52 SING N N 12
65P C36 O35 SING N N 13
65P C45 C46 DOUB Y N 14
65P C45 C34 SING Y N 15
65P C46 C29 SING Y N 16
65P C21 C12 DOUB Y N 17
65P C15 C13 DOUB Y N 18
65P C52 C51 SING N N 19
65P C52 O54 SING N N 20
65P O35 C34 SING N N 21
65P C34 C32 DOUB Y N 22
65P C29 C28 SING N N 23
65P C29 C30 DOUB Y N 24
65P C51 C28 DOUB Y N 25
65P C51 C05 SING Y N 26
65P C12 C13 SING Y N 27
65P C12 C09 SING N N 28
65P C28 C27 SING Y N 29
65P C01 C05 SING N N 30
65P C05 N06 DOUB Y N 31
65P C27 C25 SING Y N 32
65P C27 C07 DOUB Y N 33
65P N06 C07 SING Y N 34
65P O54 C55 SING N N 35
65P C25 C23 DOUB Y N 36
65P C07 N08 SING Y N 37
65P N08 C23 SING Y N 38
65P N08 C09 SING N N 39
65P C32 C30 SING Y N 40
65P C60 C55 SING N N 41
65P C55 C56 SING N N 42
65P C55 C64 SING N N 43
65P C13 H1 SING N N 44
65P C15 H2 SING N N 45
65P C21 H3 SING N N 46
65P C01 H4 SING N N 47
65P C01 H5 SING N N 48
65P C01 H6 SING N N 49
65P C09 H7 SING N N 50
65P C09 H8 SING N N 51
65P C23 H9 SING N N 52
65P C25 H10 SING N N 53
65P C30 H11 SING N N 54
65P C32 H12 SING N N 55
65P C36 H13 SING N N 56
65P C36 H14 SING N N 57
65P C39 H15 SING N N 58
65P C39 H16 SING N N 59
65P C42 H17 SING N N 60
65P C42 H18 SING N N 61
65P C47 H19 SING N N 62
65P C47 H20 SING N N 63
65P C47 H21 SING N N 64
65P C52 H22 SING N N 65
65P C56 H23 SING N N 66
65P C56 H24 SING N N 67
65P C56 H25 SING N N 68
65P C60 H26 SING N N 69
65P C60 H27 SING N N 70
65P C60 H28 SING N N 71
65P C64 H29 SING N N 72
65P C64 H30 SING N N 73
65P C64 H31 SING N N 74
65P O71 H32 SING N N 75
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
65P SMILES ACDLabs 12.01 c1cc(F)c(cc1Cn3c2nc(C)c(c(c2cc3)c5ccc4OCCCc4c5C)C(OC(C)(C)C)C(=O)O)F
65P InChI InChI 1.03 InChI=1S/C31H32F2N2O4/c1-17-20-7-6-14-38-25(20)11-9-21(17)27-22-12-13-35(16-19-8-10-23(32)24(33)15-19)29(22)34-18(2)26(27)28(30(36)37)39-31(3,4)5/h8-13,15,28H,6-7,14,16H2,1-5H3,(H,36,37)/t28-/m0/s1
65P InChIKey InChI 1.03 FCHYUVWFDGOTFV-NDEPHWFRSA-N
65P SMILES_CANONICAL CACTVS 3.385 Cc1nc2n(Cc3ccc(F)c(F)c3)ccc2c(c4ccc5OCCCc5c4C)c1[C@H](OC(C)(C)C)C(O)=O
65P SMILES CACTVS 3.385 Cc1nc2n(Cc3ccc(F)c(F)c3)ccc2c(c4ccc5OCCCc5c4C)c1[CH](OC(C)(C)C)C(O)=O
65P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 Cc1c(ccc2c1CCCO2)c3c4ccn(c4nc(c3[C@@H](C(=O)O)OC(C)(C)C)C)Cc5ccc(c(c5)F)F
65P SMILES "OpenEye OEToolkits" 2.0.4 Cc1c(ccc2c1CCCO2)c3c4ccn(c4nc(c3C(C(=O)O)OC(C)(C)C)C)Cc5ccc(c(c5)F)F
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
65P "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid"
65P "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "(2~{S})-2-[1-[[3,4-bis(fluoranyl)phenyl]methyl]-6-methyl-4-(5-methyl-3,4-dihydro-2~{H}-chromen-6-yl)pyrrolo[2,3-b]pyridin-5-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
65P 'Create component' 2016-01-28 RCSB
65P 'Initial release' 2016-12-14 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
65P C13 C 6.844 4.296 1
65P C15 C 7.310 5.721 2
65P C17 C 6.308 6.838 3
65P C21 C 4.374 5.103 4
65P C28 C 6.897 -2.264 5
65P C01 C 3.000 -3.014 6
65P C05 C 4.299 -2.264 7
65P N06 N 4.299 -0.764 8
65P C07 C 5.598 -0.014 9
65P N08 N 5.912 1.444 10
65P C09 C 4.910 2.561 11
65P C12 C 5.376 3.986 12
65P F18 F 6.774 8.264 13
65P C19 C 4.840 6.529 14
65P F20 F 3.838 7.645 15
65P C23 C 7.395 1.599 16
65P C25 C 8.003 0.237 17
65P C27 C 6.897 -0.764 18
65P C29 C 8.196 -3.014 19
65P C30 C 8.196 -4.514 20
65P C32 C 9.495 -5.264 21
65P C34 C 10.794 -4.514 22
65P O35 O 12.135 -5.316 23
65P C36 C 13.494 -4.545 24
65P C39 C 13.494 -2.982 25
65P C42 C 12.135 -2.212 26
65P C45 C 10.794 -3.014 27
65P C46 C 9.495 -2.264 28
65P C47 C 9.495 -0.764 29
65P C51 C 5.598 -3.014 30
65P C52 C 5.598 -4.514 31
65P O54 O 6.897 -5.264 32
65P C55 C 6.897 -6.764 33
65P C56 C 8.397 -6.764 34
65P C60 C 6.897 -8.264 35
65P C64 C 5.397 -6.764 36
65P C68 C 4.299 -5.264 37
65P O69 O 4.299 -6.764 38
65P O71 O 3.000 -4.514 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
65P F20 C19 SINGLE NONE 1
65P F18 C17 SINGLE NONE 2
65P C42 C39 SINGLE NONE 3
65P C42 C45 SINGLE NONE 4
65P C39 C36 SINGLE NONE 5
65P C47 C46 SINGLE NONE 6
65P O69 C68 DOUBLE NONE 7
65P C19 C17 DOUBLE NONE 8
65P C19 C21 SINGLE NONE 9
65P C17 C15 SINGLE NONE 10
65P O71 C68 SINGLE NONE 11
65P C68 C52 SINGLE NONE 12
65P C36 O35 SINGLE NONE 13
65P C45 C46 DOUBLE NONE 14
65P C45 C34 SINGLE NONE 15
65P C46 C29 SINGLE NONE 16
65P C21 C12 DOUBLE NONE 17
65P C15 C13 DOUBLE NONE 18
65P C52 C51 SINGLE NONE 19
65P C52 O54 SINGLE BEGINDASH 20
65P O35 C34 SINGLE NONE 21
65P C34 C32 DOUBLE NONE 22
65P C29 C28 SINGLE NONE 23
65P C29 C30 DOUBLE NONE 24
65P C51 C28 SINGLE NONE 25
65P C51 C05 DOUBLE NONE 26
65P C12 C13 SINGLE NONE 27
65P C12 C09 SINGLE NONE 28
65P C28 C27 DOUBLE NONE 29
65P C01 C05 SINGLE NONE 30
65P C05 N06 SINGLE NONE 31
65P C27 C25 SINGLE NONE 32
65P C27 C07 SINGLE NONE 33
65P N06 C07 DOUBLE NONE 34
65P O54 C55 SINGLE NONE 35
65P C25 C23 DOUBLE NONE 36
65P C07 N08 SINGLE NONE 37
65P N08 C23 SINGLE NONE 38
65P N08 C09 SINGLE NONE 39
65P C32 C30 SINGLE NONE 40
65P C60 C55 SINGLE NONE 41
65P C55 C56 SINGLE NONE 42
65P C55 C64 SINGLE NONE 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
65P MurckoScaffold S1 scaffold c1ccc(Cn2ccc3c(-c4ccc5c(c4)CCCO5)ccnc32)cc1 InChI=1S/C23H20N2O/c1-2-5-17(6-3-1)16-25-13-11-21-20(10-12-24-23(21)25)18-8-9-22-19(15-18)7-4-14-26-22/h1-3,5-6,8-13,15H,4,7,14,16H2 ZYXWZLGKLQBQNO-UHFFFAOYSA-N
65P phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
65P pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
65P pyrrole F3 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
65P tocol F4 fragment c1ccc2c(c1)CCCO2 InChI=1S/C9H10O/c1-2-6-9-8(4-1)5-3-7-10-9/h1-2,4,6H,3,5,7H2 VZWXIQHBIQLMPN-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
65P C13 S1 1
65P C15 S1 1
65P C17 S1 1
65P C21 S1 1
65P C28 S1 1
65P C05 S1 1
65P N06 S1 1
65P C07 S1 1
65P N08 S1 1
65P C09 S1 1
65P C12 S1 1
65P C19 S1 1
65P C23 S1 1
65P C25 S1 1
65P C27 S1 1
65P C29 S1 1
65P C30 S1 1
65P C32 S1 1
65P C34 S1 1
65P O35 S1 1
65P C36 S1 1
65P C39 S1 1
65P C42 S1 1
65P C45 S1 1
65P C46 S1 1
65P C51 S1 1
65P C13 F1 1
65P C15 F1 1
65P C17 F1 1
65P C19 F1 1
65P C21 F1 1
65P C12 F1 1
65P C29 F1 2
65P C46 F1 2
65P C45 F1 2
65P C34 F1 2
65P C32 F1 2
65P C30 F1 2
65P C05 F2 1
65P C51 F2 1
65P C28 F2 1
65P C27 F2 1
65P C07 F2 1
65P N06 F2 1
65P C07 F3 1
65P C27 F3 1
65P C25 F3 1
65P C23 F3 1
65P N08 F3 1
65P C29 F4 1
65P C30 F4 1
65P C32 F4 1
65P C34 F4 1
65P C45 F4 1
65P C46 F4 1
65P C42 F4 1
65P C39 F4 1
65P C36 F4 1
65P O35 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 65P
_pdbe_chem_comp_rdkit_properties.exactmw 534.233
_pdbe_chem_comp_rdkit_properties.amw 534.603
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 39
_pdbe_chem_comp_rdkit_properties.NumAtoms 71
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.355
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 270.799
_pdbe_chem_comp_rdkit_properties.tpsa 73.580
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.368
_pdbe_chem_comp_rdkit_properties.CrippenMR 139.666
_pdbe_chem_comp_rdkit_properties.chi0v 18.783
_pdbe_chem_comp_rdkit_properties.chi1v 10.221
_pdbe_chem_comp_rdkit_properties.chi2v 4.968
_pdbe_chem_comp_rdkit_properties.chi3v 4.968
_pdbe_chem_comp_rdkit_properties.chi4v 3.484
_pdbe_chem_comp_rdkit_properties.chi0n 50.783
_pdbe_chem_comp_rdkit_properties.chi1n 26.129
_pdbe_chem_comp_rdkit_properties.chi2n 4.968
_pdbe_chem_comp_rdkit_properties.chi3n 4.968
_pdbe_chem_comp_rdkit_properties.chi4n 3.484
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.780
_pdbe_chem_comp_rdkit_properties.kappa1 8.131
_pdbe_chem_comp_rdkit_properties.kappa2 10.076
_pdbe_chem_comp_rdkit_properties.kappa3 5.130
_pdbe_chem_comp_rdkit_properties.Phi 2.101
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
65P UniChem PDBe 65P
65P UniChem ZINC ZINC000207550478
65P UniChem SureChEMBL SCHEMBL14577130
65P UniChem PubChem 71209363
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
65P C13 5.039 -1.089 -0.729 ETKDGv3 1
65P C15 5.161 -0.849 -2.041 ETKDGv3 2
65P C17 5.497 0.508 -2.518 ETKDGv3 3
65P C21 5.534 1.242 -0.189 ETKDGv3 4
65P C28 0.151 -0.322 1.395 ETKDGv3 5
65P C01 1.261 -3.964 0.548 ETKDGv3 6
65P C05 1.223 -2.516 0.948 ETKDGv3 7
65P N06 2.480 -1.918 1.341 ETKDGv3 8
65P C07 2.507 -0.689 1.746 ETKDGv3 9
65P N08 3.657 0.064 2.093 ETKDGv3 10
65P C09 5.032 -0.254 1.720 ETKDGv3 11
65P C12 5.242 0.006 0.253 ETKDGv3 12
65P F18 5.620 0.742 -3.848 ETKDGv3 13
65P C19 5.675 1.502 -1.638 ETKDGv3 14
65P F20 5.979 2.751 -2.071 ETKDGv3 15
65P C23 3.146 1.388 2.321 ETKDGv3 16
65P C25 1.818 1.460 2.168 ETKDGv3 17
65P C27 1.345 0.132 1.783 ETKDGv3 18
65P C29 -1.003 0.600 1.360 ETKDGv3 19
65P C30 -1.913 0.538 2.344 ETKDGv3 20
65P C32 -3.093 1.414 2.326 ETKDGv3 21
65P C34 -3.255 2.304 1.344 ETKDGv3 22
65P O35 -4.390 3.120 1.336 ETKDGv3 23
65P C36 -4.706 3.956 0.226 ETKDGv3 24
65P C39 -3.433 4.587 -0.340 ETKDGv3 25
65P C42 -2.447 3.500 -0.791 ETKDGv3 26
65P C45 -2.225 2.446 0.277 ETKDGv3 27
65P C46 -1.162 1.600 0.253 ETKDGv3 28
65P C47 -0.110 1.698 -0.831 ETKDGv3 29
65P C51 0.069 -1.765 0.937 ETKDGv3 30
65P C52 -1.278 -2.369 0.533 ETKDGv3 31
65P O54 -2.018 -1.429 -0.237 ETKDGv3 32
65P C55 -2.306 -1.813 -1.579 ETKDGv3 33
65P C56 -3.240 -3.045 -1.636 ETKDGv3 34
65P C60 -3.058 -0.627 -2.207 ETKDGv3 35
65P C64 -1.020 -2.051 -2.404 ETKDGv3 36
65P C68 -2.064 -2.723 1.764 ETKDGv3 37
65P O69 -1.542 -3.433 2.666 ETKDGv3 38
65P O71 -3.386 -2.306 1.896 ETKDGv3 39
65P H1 4.790 -2.086 -0.389 ETKDGv3 40
65P H2 5.011 -1.649 -2.754 ETKDGv3 41
65P H3 5.659 2.062 0.507 ETKDGv3 42
65P H4 1.044 -4.067 -0.535 ETKDGv3 43
65P H5 0.533 -4.552 1.144 ETKDGv3 44
65P H6 2.271 -4.386 0.735 ETKDGv3 45
65P H7 5.734 0.359 2.327 ETKDGv3 46
65P H8 5.242 -1.320 1.953 ETKDGv3 47
65P H9 3.773 2.239 2.551 ETKDGv3 48
65P H10 1.223 2.358 2.263 ETKDGv3 49
65P H11 -1.798 -0.168 3.158 ETKDGv3 50
65P H12 -3.836 1.324 3.108 ETKDGv3 51
65P H13 -5.407 4.751 0.556 ETKDGv3 52
65P H14 -5.206 3.350 -0.560 ETKDGv3 53
65P H15 -3.691 5.236 -1.204 ETKDGv3 54
65P H16 -2.958 5.219 0.442 ETKDGv3 55
65P H17 -2.842 3.006 -1.705 ETKDGv3 56
65P H18 -1.489 4.001 -1.049 ETKDGv3 57
65P H19 -0.570 1.884 -1.823 ETKDGv3 58
65P H20 0.592 2.523 -0.591 ETKDGv3 59
65P H21 0.469 0.759 -0.931 ETKDGv3 60
65P H22 -1.127 -3.323 -0.002 ETKDGv3 61
65P H23 -3.622 -3.198 -2.668 ETKDGv3 62
65P H24 -2.722 -3.980 -1.343 ETKDGv3 63
65P H25 -4.108 -2.898 -0.958 ETKDGv3 64
65P H26 -3.979 -0.403 -1.627 ETKDGv3 65
65P H27 -2.422 0.283 -2.200 ETKDGv3 66
65P H28 -3.347 -0.842 -3.259 ETKDGv3 67
65P H29 -0.508 -2.990 -2.114 ETKDGv3 68
65P H30 -1.259 -2.134 -3.486 ETKDGv3 69
65P H31 -0.312 -1.207 -2.263 ETKDGv3 70
65P H32 -3.927 -2.546 2.718 ETKDGv3 71
#