data_6MZ
#
_chem_comp.id 6MZ
_chem_comp.name "N6-METHYLADENOSINE-5'-MONOPHOSPHATE"
_chem_comp.type "RNA LINKING"
_chem_comp.pdbx_type ATOMN
_chem_comp.formula "C11 H16 N5 O7 P"
_chem_comp.mon_nstd_parent_comp_id A
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2007-03-21
_chem_comp.pdbx_modified_date 2018-03-14
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 361.248
_chem_comp.one_letter_code A
_chem_comp.three_letter_code 6MZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6MZ C2 C2 C 0 1 Y N N N N N 202.191 94.809 -2.784 4.850 -1.059 -0.961 C2 6MZ 1
6MZ C4 C4 C 0 1 Y N N N N N 200.999 93.902 -1.149 2.811 -0.211 -0.324 C4 6MZ 2
6MZ C5 C5 C 0 1 Y N N N N N 201.650 94.643 -0.171 3.452 0.951 0.140 C5 6MZ 3
6MZ O1P O1P O 0 1 N N N N N N 199.114 89.190 4.356 -6.250 0.244 0.138 O1P 6MZ 4
6MZ O2P O2P O 0 1 N N N N N N 200.745 91.209 4.442 -4.706 1.944 1.186 O2P 6MZ 5
6MZ N9 N9 N 0 1 Y N N N N N 200.080 93.130 -0.485 1.473 -0.028 -0.080 N9 6MZ 6
6MZ N3 N3 N 0 1 Y N N N N N 201.219 93.937 -2.480 3.543 -1.181 -0.862 N3 6MZ 7
6MZ N1 N1 N 0 1 Y N N N N N 202.913 95.597 -1.965 5.496 0.013 -0.540 N1 6MZ 8
6MZ C6 C6 C 0 1 Y N N N N N 202.675 95.549 -0.627 4.848 1.034 0.012 C6 6MZ 9
6MZ N6 N6 N 0 1 N N N N N N 203.426 96.361 0.159 5.534 2.154 0.449 N6 6MZ 10
6MZ C9 C9 C 0 1 N N N N N N 203.322 96.445 1.513 6.990 2.223 0.308 C9 6MZ 11
6MZ N7 N7 N 0 1 Y N N N N N 201.147 94.331 1.087 2.490 1.767 0.633 N7 6MZ 12
6MZ C8 C8 C 0 1 Y N N N N N 200.223 93.433 0.845 1.328 1.195 0.505 C8 6MZ 13
6MZ "O5'" "O5'" O 0 1 N N N N N N 199.377 90.741 2.391 -3.698 0.344 -0.486 "O5'" 6MZ 14
6MZ "C5'" "C5'" C 0 1 N N N N N N 198.283 90.142 1.666 -3.093 -0.612 0.388 "C5'" 6MZ 15
6MZ "C4'" "C4'" C 0 1 N N R N N N 198.433 90.365 0.182 -1.898 -1.260 -0.313 "C4'" 6MZ 16
6MZ "O4'" "O4'" O 0 1 N N N N N N 198.234 91.770 -0.112 -0.864 -0.284 -0.519 "O4'" 6MZ 17
6MZ "C1'" "C1'" C 0 1 N N R N N N 199.152 92.188 -1.101 0.398 -0.973 -0.391 "C1'" 6MZ 18
6MZ "C2'" "C2'" C 0 1 N N R N N N 199.837 90.933 -1.635 0.162 -1.942 0.796 "C2'" 6MZ 19
6MZ "O2'" "O2'" O 0 1 N N N N N N 199.113 90.419 -2.736 1.040 -3.066 0.719 "O2'" 6MZ 20
6MZ "C3'" "C3'" C 0 1 N N S N N N 199.796 90.041 -0.405 -1.311 -2.375 0.574 "C3'" 6MZ 21
6MZ "O3'" "O3'" O 0 1 N N N N N N 199.941 88.649 -0.671 -1.369 -3.633 -0.100 "O3'" 6MZ 22
6MZ P P P 0 1 N N N N N N 199.470 90.599 3.984 -4.985 1.218 -0.073 P 6MZ 23
6MZ O3P O3P O 0 1 N Y N N N N 198.265 91.505 4.523 -5.313 2.276 -1.242 O3P 6MZ 24
6MZ H2 H2 H 0 1 N N N N N N 202.428 94.891 -3.834 5.416 -1.868 -1.399 H2 6MZ 25
6MZ H1P H1P H 0 1 N N N N N N 199.807 88.818 4.889 -6.490 -0.265 -0.648 H1P 6MZ 26
6MZ H8 H8 H 0 1 N N N N N N 199.629 92.974 1.622 0.388 1.625 0.817 H8 6MZ 27
6MZ "H1'" "H1'" H 0 1 N N N N N N 198.622 92.680 -1.930 0.627 -1.527 -1.302 "H1'" 6MZ 28
6MZ H9C1 H9C1 H 0 0 N N N N N N 204.048 97.179 1.892 7.449 1.401 0.859 H9C1 6MZ 29
6MZ H9C2 H9C2 H 0 0 N N N N N N 202.304 96.763 1.783 7.257 2.146 -0.747 H9C2 6MZ 30
6MZ "H5'1" "H5'1" H 0 0 N N N N N N 198.267 89.061 1.868 -2.754 -0.111 1.295 "H5'1" 6MZ 31
6MZ "H5'2" "H5'2" H 0 0 N N N N N N 197.338 90.592 2.004 -3.822 -1.379 0.648 "H5'2" 6MZ 32
6MZ "H4'" "H4'" H 0 1 N N N N N N 197.673 89.768 -0.344 -2.212 -1.675 -1.271 "H4'" 6MZ 33
6MZ "H3'" "H3'" H 0 1 N N N N N N 200.573 90.374 0.299 -1.842 -2.425 1.525 "H3'" 6MZ 34
6MZ "H2'" "H2'" H 0 1 N N N N N N 200.880 91.159 -1.904 0.278 -1.425 1.748 "H2'" 6MZ 35
6MZ HA HA H 0 1 N N N N N N 199.545 89.639 -3.063 0.931 -3.701 1.440 HA 6MZ 36
6MZ HB HB H 0 1 N Y N N N N 200.802 88.484 -1.036 -1.012 -4.371 0.414 HB 6MZ 37
6MZ H3P H3P H 0 1 N Y N N N N 198.615 92.236 5.018 -6.079 2.838 -1.060 H3P 6MZ 38
6MZ H6 H6 H 0 1 N N N N N N 204.375 96.104 -0.021 5.050 2.893 0.850 H6 6MZ 39
6MZ H9 H9 H 0 1 N N N N N N 203.529 95.461 1.958 7.350 3.172 0.705 H9 6MZ 40
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6MZ C4 C5 SING Y N 1
6MZ C4 N9 SING Y N 2
6MZ C2 N3 SING Y N 3
6MZ C4 N3 DOUB Y N 4
6MZ C2 N1 DOUB Y N 5
6MZ C5 C6 DOUB Y N 6
6MZ N1 C6 SING Y N 7
6MZ C6 N6 SING N N 8
6MZ N6 C9 SING N N 9
6MZ C5 N7 SING Y N 10
6MZ N9 C8 SING Y N 11
6MZ N7 C8 DOUB Y N 12
6MZ "O5'" "C5'" SING N N 13
6MZ "C1'" "H1'" SING N N 14
6MZ C9 H9C1 SING N N 15
6MZ C9 H9C2 SING N N 16
6MZ "C5'" "H5'1" SING N N 17
6MZ "C5'" "H5'2" SING N N 18
6MZ "C4'" "H4'" SING N N 19
6MZ "C3'" "H3'" SING N N 20
6MZ "C2'" "H2'" SING N N 21
6MZ "O2'" HA SING N N 22
6MZ "O3'" HB SING N N 23
6MZ O3P H3P SING N N 24
6MZ "C5'" "C4'" SING N N 25
6MZ "C4'" "O4'" SING N N 26
6MZ N9 "C1'" SING N N 27
6MZ "O4'" "C1'" SING N N 28
6MZ "C1'" "C2'" SING N N 29
6MZ "C2'" "O2'" SING N N 30
6MZ "C4'" "C3'" SING N N 31
6MZ "C2'" "C3'" SING N N 32
6MZ "C3'" "O3'" SING N N 33
6MZ O1P P SING N N 34
6MZ O2P P DOUB N N 35
6MZ "O5'" P SING N N 36
6MZ P O3P SING N N 37
6MZ C2 H2 SING N N 38
6MZ O1P H1P SING N N 39
6MZ C8 H8 SING N N 40
6MZ N6 H6 SING N N 41
6MZ C9 H9 SING N N 42
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6MZ SMILES ACDLabs 12.01 c1nc2c(c(n1)NC)ncn2C3OC(COP(O)(=O)O)C(C3O)O
6MZ InChI InChI 1.03 InChI=1S/C11H16N5O7P/c1-12-9-6-10(14-3-13-9)16(4-15-6)11-8(18)7(17)5(23-11)2-22-24(19,20)21/h3-5,7-8,11,17-18H,2H2,1H3,(H,12,13,14)(H2,19,20,21)/t5-,7-,8-,11-/m1/s1
6MZ InChIKey InChI 1.03 WETVNPRPZIYMAC-IOSLPCCCSA-N
6MZ SMILES_CANONICAL CACTVS 3.385 CNc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
6MZ SMILES CACTVS 3.385 CNc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
6MZ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CNc1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
6MZ SMILES "OpenEye OEToolkits" 1.7.6 CNc1c2c(ncn1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
6MZ "SYSTEMATIC NAME" ACDLabs 12.01 "N-methyladenosine 5'-(dihydrogen phosphate)"
6MZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R,5R)-5-[6-(methylamino)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6MZ 'Create component' 2007-03-21 RCSB
6MZ 'Modify aromatic_flag' 2011-06-04 RCSB
6MZ 'Modify descriptor' 2011-06-04 RCSB
6MZ 'Modify parent residue' 2011-12-15 RCSB
6MZ 'Modify leaving atom flag' 2014-09-18 RCSB
6MZ 'Modify one letter code' 2018-03-14 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
6MZ C2 C 3.000 -2.947 1
6MZ C4 C 5.598 -2.947 2
6MZ C5 C 5.598 -4.447 3
6MZ O1P O 7.110 6.758 4
6MZ O2P O 8.998 5.791 5
6MZ N9 N 7.018 -2.490 6
6MZ N3 N 4.299 -2.197 7
6MZ N1 N 3.000 -4.447 8
6MZ C6 C 4.299 -5.197 9
6MZ N6 N 4.299 -6.697 10
6MZ C9 C 3.000 -7.447 11
6MZ N7 N 7.018 -4.905 12
6MZ C8 C 7.893 -3.697 13
6MZ "O5'" O 8.032 3.903 14
6MZ "C5'" C 7.027 2.790 15
6MZ "C4'" C 7.487 1.362 16
6MZ "O4'" O 6.604 0.150 17
6MZ "C1'" C 7.483 -1.065 18
6MZ "C2'" C 8.911 -0.604 19
6MZ "O2'" O 10.123 -1.487 20
6MZ "C3'" C 8.913 0.896 21
6MZ "O3'" O 10.129 1.776 22
6MZ P P 7.571 5.330 23
6MZ O3P O 6.144 4.869 24
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
6MZ C4 C5 DOUBLE NONE 1
6MZ C4 N9 SINGLE NONE 2
6MZ C2 N3 DOUBLE NONE 3
6MZ C4 N3 SINGLE NONE 4
6MZ C2 N1 SINGLE NONE 5
6MZ C5 C6 SINGLE NONE 6
6MZ N1 C6 DOUBLE NONE 7
6MZ C6 N6 SINGLE NONE 8
6MZ N6 C9 SINGLE NONE 9
6MZ C5 N7 SINGLE NONE 10
6MZ N9 C8 SINGLE NONE 11
6MZ N7 C8 DOUBLE NONE 12
6MZ "O5'" "C5'" SINGLE NONE 13
6MZ "C4'" "C5'" SINGLE BEGINDASH 14
6MZ "C4'" "O4'" SINGLE NONE 15
6MZ "C1'" N9 SINGLE BEGINDASH 16
6MZ "O4'" "C1'" SINGLE NONE 17
6MZ "C1'" "C2'" SINGLE NONE 18
6MZ "C2'" "O2'" SINGLE BEGINWEDGE 19
6MZ "C4'" "C3'" SINGLE NONE 20
6MZ "C2'" "C3'" SINGLE NONE 21
6MZ "C3'" "O3'" SINGLE BEGINWEDGE 22
6MZ O1P P SINGLE NONE 23
6MZ O2P P DOUBLE NONE 24
6MZ "O5'" P SINGLE NONE 25
6MZ P O3P SINGLE NONE 26
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
6MZ MurckoScaffold S1 scaffold 'c1ncc2ncn([C@H]3CCCO3)c2n1' InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1 DAKONNSVCLKUJN-MRVPVSSYSA-N
6MZ adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
6MZ imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
6MZ phosphate F3 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
6MZ purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
6MZ pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
6MZ ribose F6 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
6MZ C2 S1 1
6MZ C4 S1 1
6MZ C5 S1 1
6MZ N9 S1 1
6MZ N3 S1 1
6MZ N1 S1 1
6MZ C6 S1 1
6MZ N7 S1 1
6MZ C8 S1 1
6MZ "C4'" S1 1
6MZ "O4'" S1 1
6MZ "C1'" S1 1
6MZ "C2'" S1 1
6MZ "C3'" S1 1
6MZ N1 F1 1
6MZ C6 F1 1
6MZ C5 F1 1
6MZ C4 F1 1
6MZ N3 F1 1
6MZ C2 F1 1
6MZ N9 F1 1
6MZ C8 F1 1
6MZ N7 F1 1
6MZ N6 F1 1
6MZ C4 F2 1
6MZ C5 F2 1
6MZ N7 F2 1
6MZ C8 F2 1
6MZ N9 F2 1
6MZ O1P F3 1
6MZ P F3 1
6MZ O2P F3 1
6MZ "O5'" F3 1
6MZ O3P F3 1
6MZ N7 F4 1
6MZ C8 F4 1
6MZ N9 F4 1
6MZ C4 F4 1
6MZ C5 F4 1
6MZ C6 F4 1
6MZ N1 F4 1
6MZ C2 F4 1
6MZ N3 F4 1
6MZ C5 F5 1
6MZ C4 F5 1
6MZ N3 F5 1
6MZ C2 F5 1
6MZ N1 F5 1
6MZ C6 F5 1
6MZ "C2'" F6 1
6MZ "C3'" F6 1
6MZ "C4'" F6 1
6MZ "O4'" F6 1
6MZ "C1'" F6 1
6MZ "C5'" F6 1
6MZ "O5'" F6 1
6MZ "O3'" F6 1
6MZ "O2'" F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 6MZ
_pdbe_chem_comp_rdkit_properties.exactmw 361.079
_pdbe_chem_comp_rdkit_properties.amw 361.251
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 24
_pdbe_chem_comp_rdkit_properties.NumAtoms 40
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.545
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 157.763
_pdbe_chem_comp_rdkit_properties.tpsa 172.080
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.213
_pdbe_chem_comp_rdkit_properties.CrippenMR 75.759
_pdbe_chem_comp_rdkit_properties.chi0v 11.935
_pdbe_chem_comp_rdkit_properties.chi1v 7.171
_pdbe_chem_comp_rdkit_properties.chi2v 2.888
_pdbe_chem_comp_rdkit_properties.chi3v 2.888
_pdbe_chem_comp_rdkit_properties.chi4v 1.844
_pdbe_chem_comp_rdkit_properties.chi0n 27.041
_pdbe_chem_comp_rdkit_properties.chi1n 13.291
_pdbe_chem_comp_rdkit_properties.chi2n 2.574
_pdbe_chem_comp_rdkit_properties.chi3n 2.574
_pdbe_chem_comp_rdkit_properties.chi4n 1.650
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.660
_pdbe_chem_comp_rdkit_properties.kappa1 6.252
_pdbe_chem_comp_rdkit_properties.kappa2 6.332
_pdbe_chem_comp_rdkit_properties.kappa3 3.125
_pdbe_chem_comp_rdkit_properties.Phi 1.649
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
6MZ UniChem ChEMBL CHEMBL1230507
6MZ UniChem PDBe 6MZ
6MZ UniChem ChEBI 40196
6MZ UniChem ZINC ZINC000013516496
6MZ UniChem eMolecules 1933493
6MZ UniChem BRENDA 94452
6MZ UniChem 'Probes And Drugs' PD045691
6MZ UniChem 'EPA CompTox Dashboard' DTXSID60587882
6MZ UniChem SureChEMBL SCHEMBL4307198
6MZ UniChem 'PubChem TPHARMA' 136327795
6MZ UniChem PubChem 16760025
6MZ UniChem Nikkaji J710.068J
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
6MZ C2 -1.540 -1.738 0.762 ETKDGv3 1
6MZ C4 -1.670 -0.001 -0.824 ETKDGv3 2
6MZ C5 -2.949 0.170 -0.630 ETKDGv3 3
6MZ O1P 5.674 -1.901 1.842 ETKDGv3 4
6MZ O2P 3.198 -2.722 1.767 ETKDGv3 5
6MZ N9 -1.170 1.009 -1.683 ETKDGv3 6
6MZ N3 -0.916 -0.980 -0.100 ETKDGv3 7
6MZ N1 -2.961 -1.571 0.993 ETKDGv3 8
6MZ C6 -3.656 -0.668 0.348 ETKDGv3 9
6MZ N6 -5.057 -0.497 0.594 ETKDGv3 10
6MZ C9 -5.777 -1.312 1.565 ETKDGv3 11
6MZ N7 -3.413 1.326 -1.317 ETKDGv3 12
6MZ C8 -2.351 1.791 -1.911 ETKDGv3 13
6MZ "O5'" 3.766 -0.577 0.342 ETKDGv3 14
6MZ "C5'" 2.674 -0.769 -0.529 ETKDGv3 15
6MZ "C4'" 2.145 0.592 -0.992 ETKDGv3 16
6MZ "O4'" 1.089 0.405 -1.906 ETKDGv3 17
6MZ "C1'" 0.206 1.499 -1.766 ETKDGv3 18
6MZ "C2'" 0.578 2.301 -0.508 ETKDGv3 19
6MZ "O2'" 1.074 3.577 -0.844 ETKDGv3 20
6MZ "C3'" 1.623 1.435 0.164 ETKDGv3 21
6MZ "O3'" 2.655 2.190 0.746 ETKDGv3 22
6MZ P 4.278 -2.102 0.908 ETKDGv3 23
6MZ O3P 4.623 -3.131 -0.392 ETKDGv3 24
6MZ H2 -0.990 -2.485 1.317 ETKDGv3 25
6MZ H1P 6.311 -1.434 1.246 ETKDGv3 26
6MZ H8 -2.361 2.700 -2.496 ETKDGv3 27
6MZ "H1'" 0.295 2.135 -2.674 ETKDGv3 28
6MZ H9C1 -6.845 -1.011 1.592 ETKDGv3 29
6MZ H9C2 -5.712 -2.383 1.279 ETKDGv3 30
6MZ "H5'1" 2.996 -1.335 -1.431 ETKDGv3 31
6MZ "H5'2" 1.849 -1.323 -0.026 ETKDGv3 32
6MZ "H4'" 2.967 1.133 -1.515 ETKDGv3 33
6MZ "H3'" 1.133 0.786 0.929 ETKDGv3 34
6MZ "H2'" -0.294 2.434 0.171 ETKDGv3 35
6MZ HA 1.856 3.457 -1.445 ETKDGv3 36
6MZ HB 2.278 2.587 1.574 ETKDGv3 37
6MZ H3P 5.319 -2.654 -0.912 ETKDGv3 38
6MZ H6 -5.584 0.232 0.063 ETKDGv3 39
6MZ H9 -5.338 -1.169 2.575 ETKDGv3 40
#