data_7EJ # _chem_comp.id 7EJ _chem_comp.name 1-(4-methoxybutyl)-N-(2-methylpropyl)-N-[(3S,5R)-5-(morpholine-4-carbonyl)piperidin-3-yl]-5-phenyl-1H-pyrrole-2-carboxamide _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H44 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-10-14 _chem_comp.pdbx_modified_date 2017-10-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 524.695 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7EJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5TMK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7EJ C4 C1 C 0 1 N N N N N N 13.864 -44.799 -0.195 -2.339 -3.294 -0.486 C4 7EJ 1 7EJ C5 C2 C 0 1 N N N N N N 12.581 -45.630 -0.163 -2.592 -1.919 0.137 C5 7EJ 2 7EJ C6 C3 C 0 1 N N N N N N 11.639 -45.225 -1.304 -2.904 -0.908 -0.968 C6 7EJ 3 7EJ C8 C4 C 0 1 Y N N N N N 9.416 -46.469 -1.154 -2.058 1.336 -0.165 C8 7EJ 4 7EJ C10 C5 C 0 1 Y N N N N N 9.930 -48.306 -2.322 -3.984 2.228 0.539 C10 7EJ 5 7EJ C13 C6 C 0 1 Y N N N N N 12.829 -49.168 -2.801 -5.661 -1.072 -0.133 C13 7EJ 6 7EJ C15 C7 C 0 1 Y N N N N N 14.633 -48.579 -4.287 -8.050 -0.907 -0.117 C15 7EJ 7 7EJ C17 C8 C 0 1 Y N N N N N 12.940 -46.948 -3.807 -6.731 1.084 0.063 C17 7EJ 8 7EJ C21 C9 C 0 1 N N N N N N 7.776 -47.119 1.313 -0.289 3.522 -0.081 C21 7EJ 9 7EJ C22 C10 C 0 1 N N N N N N 8.810 -47.566 2.371 -0.298 3.654 1.443 C22 7EJ 10 7EJ C24 C11 C 0 1 N N N N N N 10.109 -46.762 2.472 1.126 3.491 1.977 C24 7EJ 11 7EJ C1 C12 C 0 1 N N N N N N 14.749 -41.701 1.406 -1.263 -6.557 0.960 C1 7EJ 12 7EJ O2 O1 O 0 1 N N N N N N 15.033 -43.028 0.973 -1.673 -5.560 0.022 O2 7EJ 13 7EJ C3 C13 C 0 1 N N N N N N 13.908 -43.898 1.038 -1.908 -4.277 0.604 C3 7EJ 14 7EJ N7 N1 N 0 1 Y N N N N N 10.731 -46.352 -1.588 -3.066 0.424 -0.380 N7 7EJ 15 7EJ C9 C14 C 0 1 Y N N N N N 8.922 -47.666 -1.629 -2.616 2.461 0.410 C9 7EJ 16 7EJ C11 C15 C 0 1 Y N N N N N 11.038 -47.497 -2.288 -4.242 0.967 0.047 C11 7EJ 17 7EJ C12 C16 C 0 1 Y N N N N N 12.300 -47.873 -2.959 -5.568 0.315 -0.009 C12 7EJ 18 7EJ C14 C17 C 0 1 Y N N N N N 13.997 -49.505 -3.464 -6.901 -1.674 -0.189 C14 7EJ 19 7EJ C16 C18 C 0 1 Y N N N N N 14.113 -47.301 -4.458 -7.964 0.468 0.011 C16 7EJ 20 7EJ C18 C19 C 0 1 N N N N N N 8.604 -45.494 -0.401 -0.640 1.144 -0.483 C18 7EJ 21 7EJ O19 O2 O 0 1 N N N N N N 8.598 -44.366 -0.864 -0.226 0.038 -0.775 O19 7EJ 22 7EJ N20 N2 N 0 1 N N N N N N 7.852 -45.757 0.713 0.205 2.194 -0.454 N20 7EJ 23 7EJ C23 C20 C 0 1 N N N N N N 9.145 -49.042 2.155 -0.835 5.032 1.832 C23 7EJ 24 7EJ C25 C21 C 0 1 N N S N N N 7.065 -44.615 1.261 1.618 2.007 -0.794 C25 7EJ 25 7EJ C27 C22 C 0 1 N N N N N N 7.542 -44.140 2.652 1.741 1.618 -2.269 C27 7EJ 26 7EJ N28 N3 N 0 1 N N N N N N 6.596 -43.209 3.299 3.155 1.410 -2.606 N28 7EJ 27 7EJ C29 C23 C 0 1 N N N N N N 5.235 -43.754 3.430 3.732 0.312 -1.819 C29 7EJ 28 7EJ C30 C24 C 0 1 N N R N N N 4.662 -43.939 2.017 3.668 0.661 -0.330 C30 7EJ 29 7EJ C32 C25 C 0 1 N N N N N N 5.545 -44.920 1.209 2.209 0.892 0.073 C32 7EJ 30 7EJ C33 C26 C 0 1 N N N N N N 3.225 -44.425 2.105 4.240 -0.475 0.478 C33 7EJ 31 7EJ O34 O3 O 0 1 N N N N N N 3.031 -45.618 2.204 3.503 -1.312 0.953 O34 7EJ 32 7EJ N35 N4 N 0 1 N N N N N N 2.140 -43.596 2.073 5.571 -0.560 0.672 N35 7EJ 33 7EJ C36 C27 C 0 1 N N N N N N 2.237 -42.119 1.959 6.475 0.500 0.199 C36 7EJ 34 7EJ C37 C28 C 0 1 N N N N N N 1.489 -41.530 3.169 7.606 -0.152 -0.606 C37 7EJ 35 7EJ O38 O4 O 0 1 N N N N N N 0.154 -42.065 3.219 8.200 -1.191 0.175 O38 7EJ 36 7EJ C39 C29 C 0 1 N N N N N N 0.041 -43.493 3.349 7.309 -2.260 0.502 C39 7EJ 37 7EJ C40 C30 C 0 1 N N N N N N 0.767 -44.162 2.164 6.163 -1.713 1.368 C40 7EJ 38 7EJ H1 H1 H 0 1 N N N N N N 14.737 -45.469 -0.193 -3.254 -3.653 -0.958 H1 7EJ 39 7EJ H2 H2 H 0 1 N N N N N N 13.879 -44.180 -1.104 -1.552 -3.214 -1.236 H2 7EJ 40 7EJ H3 H3 H 0 1 N N N N N N 12.072 -45.470 0.799 -3.437 -1.981 0.822 H3 7EJ 41 7EJ H4 H4 H 0 1 N N N N N N 12.838 -46.694 -0.269 -1.704 -1.599 0.682 H4 7EJ 42 7EJ H5 H5 H 0 1 N N N N N N 12.227 -44.987 -2.203 -2.084 -0.890 -1.686 H5 7EJ 43 7EJ H6 H6 H 0 1 N N N N N N 11.053 -44.343 -1.005 -3.824 -1.196 -1.475 H6 7EJ 44 7EJ H7 H7 H 0 1 N N N N N N 9.859 -49.270 -2.804 -4.711 2.913 0.951 H7 7EJ 45 7EJ H8 H8 H 0 1 N N N N N N 12.330 -49.889 -2.171 -4.765 -1.673 -0.189 H8 7EJ 46 7EJ H9 H9 H 0 1 N N N N N N 15.542 -48.857 -4.799 -9.019 -1.383 -0.162 H9 7EJ 47 7EJ H10 H10 H 0 1 N N N N N N 12.518 -45.964 -3.950 -6.665 2.157 0.159 H10 7EJ 48 7EJ H11 H11 H 0 1 N N N N N N 6.786 -47.201 1.785 -1.301 3.653 -0.463 H11 7EJ 49 7EJ H12 H12 H 0 1 N N N N N N 7.846 -47.835 0.481 0.363 4.285 -0.508 H12 7EJ 50 7EJ H13 H13 H 0 1 N N N N N N 8.313 -47.492 3.349 -0.937 2.881 1.871 H13 7EJ 51 7EJ H14 H14 H 0 1 N N N N N N 10.745 -47.190 3.261 1.749 4.305 1.607 H14 7EJ 52 7EJ H15 H15 H 0 1 N N N N N N 10.641 -46.802 1.510 1.110 3.513 3.067 H15 7EJ 53 7EJ H16 H16 H 0 1 N N N N N N 9.874 -45.716 2.718 1.535 2.539 1.640 H16 7EJ 54 7EJ H17 H17 H 0 1 N N N N N N 15.659 -41.087 1.329 -0.334 -6.246 1.439 H17 7EJ 55 7EJ H18 H18 H 0 1 N N N N N N 13.961 -41.269 0.772 -2.037 -6.684 1.717 H18 7EJ 56 7EJ H19 H19 H 0 1 N N N N N N 14.408 -41.722 2.452 -1.104 -7.502 0.440 H19 7EJ 57 7EJ H20 H20 H 0 1 N N N N N N 12.987 -43.298 1.082 -0.993 -3.918 1.075 H20 7EJ 58 7EJ H21 H21 H 0 1 N N N N N N 13.983 -44.522 1.941 -2.696 -4.357 1.353 H21 7EJ 59 7EJ H22 H22 H 0 1 N N N N N N 7.919 -48.039 -1.484 -2.089 3.357 0.702 H22 7EJ 60 7EJ H23 H23 H 0 1 N N N N N N 14.417 -50.492 -3.342 -6.976 -2.747 -0.290 H23 7EJ 61 7EJ H24 H24 H 0 1 N N N N N N 14.618 -46.588 -5.093 -8.865 1.062 0.067 H24 7EJ 62 7EJ H25 H25 H 0 1 N N N N N N 9.881 -49.365 2.906 -1.879 5.114 1.531 H25 7EJ 63 7EJ H26 H26 H 0 1 N N N N N N 8.230 -49.644 2.256 -0.757 5.161 2.912 H26 7EJ 64 7EJ H27 H27 H 0 1 N N N N N N 9.565 -49.179 1.148 -0.251 5.804 1.332 H27 7EJ 65 7EJ H28 H28 H 0 1 N N N N N N 7.226 -43.767 0.579 2.161 2.934 -0.615 H28 7EJ 66 7EJ H29 H29 H 0 1 N N N N N N 7.666 -45.020 3.300 1.185 0.698 -2.450 H29 7EJ 67 7EJ H30 H30 H 0 1 N N N N N N 8.510 -43.631 2.536 1.334 2.417 -2.890 H30 7EJ 68 7EJ H31 H31 H 0 1 N N N N N N 6.940 -42.992 4.213 3.271 1.246 -3.594 H31 7EJ 69 7EJ H33 H33 H 0 1 N N N N N N 4.606 -43.055 4.000 3.167 -0.602 -2.002 H33 7EJ 70 7EJ H34 H34 H 0 1 N N N N N N 5.269 -44.723 3.949 4.771 0.162 -2.113 H34 7EJ 71 7EJ H35 H35 H 0 1 N N N N N N 4.673 -42.964 1.507 4.245 1.567 -0.144 H35 7EJ 72 7EJ H36 H36 H 0 1 N N N N N N 5.224 -44.884 0.158 2.163 1.183 1.122 H36 7EJ 73 7EJ H37 H37 H 0 1 N N N N N N 5.385 -45.933 1.607 1.641 -0.026 -0.076 H37 7EJ 74 7EJ H38 H38 H 0 1 N N N N N N 3.291 -41.806 1.977 5.926 1.195 -0.437 H38 7EJ 75 7EJ H39 H39 H 0 1 N N N N N N 1.769 -41.780 1.023 6.893 1.035 1.052 H39 7EJ 76 7EJ H40 H40 H 0 1 N N N N N N 2.024 -41.793 4.093 7.202 -0.573 -1.526 H40 7EJ 77 7EJ H41 H41 H 0 1 N N N N N N 1.441 -40.435 3.072 8.359 0.598 -0.848 H41 7EJ 78 7EJ H42 H42 H 0 1 N N N N N N -1.020 -43.781 3.342 6.904 -2.689 -0.414 H42 7EJ 79 7EJ H43 H43 H 0 1 N N N N N N 0.502 -43.815 4.294 7.849 -3.028 1.056 H43 7EJ 80 7EJ H44 H44 H 0 1 N N N N N N 0.220 -43.960 1.231 6.549 -1.398 2.338 H44 7EJ 81 7EJ H45 H45 H 0 1 N N N N N N 0.823 -45.248 2.328 5.406 -2.485 1.508 H45 7EJ 82 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7EJ C16 C15 DOUB Y N 1 7EJ C16 C17 SING Y N 2 7EJ C15 C14 SING Y N 3 7EJ C17 C12 DOUB Y N 4 7EJ C14 C13 DOUB Y N 5 7EJ C12 C13 SING Y N 6 7EJ C12 C11 SING N N 7 7EJ C10 C11 DOUB Y N 8 7EJ C10 C9 SING Y N 9 7EJ C11 N7 SING Y N 10 7EJ C9 C8 DOUB Y N 11 7EJ N7 C6 SING N N 12 7EJ N7 C8 SING Y N 13 7EJ C6 C5 SING N N 14 7EJ C8 C18 SING N N 15 7EJ O19 C18 DOUB N N 16 7EJ C18 N20 SING N N 17 7EJ C4 C5 SING N N 18 7EJ C4 C3 SING N N 19 7EJ N20 C25 SING N N 20 7EJ N20 C21 SING N N 21 7EJ O2 C3 SING N N 22 7EJ O2 C1 SING N N 23 7EJ C32 C25 SING N N 24 7EJ C32 C30 SING N N 25 7EJ C25 C27 SING N N 26 7EJ C21 C22 SING N N 27 7EJ C36 N35 SING N N 28 7EJ C36 C37 SING N N 29 7EJ C30 C33 SING N N 30 7EJ C30 C29 SING N N 31 7EJ N35 C33 SING N N 32 7EJ N35 C40 SING N N 33 7EJ C33 O34 DOUB N N 34 7EJ C23 C22 SING N N 35 7EJ C40 C39 SING N N 36 7EJ C22 C24 SING N N 37 7EJ C27 N28 SING N N 38 7EJ C37 O38 SING N N 39 7EJ O38 C39 SING N N 40 7EJ N28 C29 SING N N 41 7EJ C4 H1 SING N N 42 7EJ C4 H2 SING N N 43 7EJ C5 H3 SING N N 44 7EJ C5 H4 SING N N 45 7EJ C6 H5 SING N N 46 7EJ C6 H6 SING N N 47 7EJ C10 H7 SING N N 48 7EJ C13 H8 SING N N 49 7EJ C15 H9 SING N N 50 7EJ C17 H10 SING N N 51 7EJ C21 H11 SING N N 52 7EJ C21 H12 SING N N 53 7EJ C22 H13 SING N N 54 7EJ C24 H14 SING N N 55 7EJ C24 H15 SING N N 56 7EJ C24 H16 SING N N 57 7EJ C1 H17 SING N N 58 7EJ C1 H18 SING N N 59 7EJ C1 H19 SING N N 60 7EJ C3 H20 SING N N 61 7EJ C3 H21 SING N N 62 7EJ C9 H22 SING N N 63 7EJ C14 H23 SING N N 64 7EJ C16 H24 SING N N 65 7EJ C23 H25 SING N N 66 7EJ C23 H26 SING N N 67 7EJ C23 H27 SING N N 68 7EJ C25 H28 SING N N 69 7EJ C27 H29 SING N N 70 7EJ C27 H30 SING N N 71 7EJ N28 H31 SING N N 72 7EJ C29 H33 SING N N 73 7EJ C29 H34 SING N N 74 7EJ C30 H35 SING N N 75 7EJ C32 H36 SING N N 76 7EJ C32 H37 SING N N 77 7EJ C36 H38 SING N N 78 7EJ C36 H39 SING N N 79 7EJ C37 H40 SING N N 80 7EJ C37 H41 SING N N 81 7EJ C39 H42 SING N N 82 7EJ C39 H43 SING N N 83 7EJ C40 H44 SING N N 84 7EJ C40 H45 SING N N 85 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7EJ SMILES ACDLabs 12.01 C(CCn3c(C(N(CC(C)C)C2CNCC(C(=O)N1CCOCC1)C2)=O)ccc3c4ccccc4)COC 7EJ InChI InChI 1.03 InChI=1S/C30H44N4O4/c1-23(2)22-34(26-19-25(20-31-21-26)29(35)32-14-17-38-18-15-32)30(36)28-12-11-27(24-9-5-4-6-10-24)33(28)13-7-8-16-37-3/h4-6,9-12,23,25-26,31H,7-8,13-22H2,1-3H3/t25-,26+/m1/s1 7EJ InChIKey InChI 1.03 URICGOHQZDVMJG-FTJBHMTQSA-N 7EJ SMILES_CANONICAL CACTVS 3.385 COCCCCn1c(ccc1c2ccccc2)C(=O)N(CC(C)C)[C@@H]3CNC[C@@H](C3)C(=O)N4CCOCC4 7EJ SMILES CACTVS 3.385 COCCCCn1c(ccc1c2ccccc2)C(=O)N(CC(C)C)[CH]3CNC[CH](C3)C(=O)N4CCOCC4 7EJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC(C)CN([C@H]1C[C@H](CNC1)C(=O)N2CCOCC2)C(=O)c3ccc(n3CCCCOC)c4ccccc4 7EJ SMILES "OpenEye OEToolkits" 2.0.6 CC(C)CN(C1CC(CNC1)C(=O)N2CCOCC2)C(=O)c3ccc(n3CCCCOC)c4ccccc4 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7EJ "SYSTEMATIC NAME" ACDLabs 12.01 1-(4-methoxybutyl)-N-(2-methylpropyl)-N-[(3S,5R)-5-(morpholine-4-carbonyl)piperidin-3-yl]-5-phenyl-1H-pyrrole-2-carboxamide 7EJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 1-(4-methoxybutyl)-~{N}-(2-methylpropyl)-~{N}-[(3~{S},5~{R})-5-morpholin-4-ylcarbonylpiperidin-3-yl]-5-phenyl-pyrrole-2-carboxamide # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7EJ 'Create component' 2016-10-14 RCSB 7EJ 'Initial release' 2017-10-18 RCSB # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal 7EJ C4 C 15.976 2.030 1 7EJ C5 C 14.549 2.494 2 7EJ C6 C 13.434 1.490 3 7EJ C8 C 10.794 1.072 4 7EJ C10 C 10.044 3.380 5 7EJ C13 C 11.816 5.964 6 7EJ C15 C 14.189 7.021 7 7EJ C17 C 13.918 4.437 8 7EJ C21 C 8.196 -0.428 9 7EJ C22 C 6.897 -1.178 10 7EJ C24 C 6.897 -2.678 11 7EJ C1 C 19.632 3.574 12 7EJ O2 O 18.517 2.571 13 7EJ C3 C 17.090 3.034 14 7EJ N7 N 12.008 1.954 15 7EJ C9 C 9.581 1.954 16 7EJ C11 C 11.544 3.380 17 7EJ C12 C 12.426 4.594 18 7EJ C14 C 12.697 7.178 19 7EJ C16 C 14.800 5.651 20 7EJ C18 C 10.794 -0.428 21 7EJ O19 O 12.093 -1.178 22 7EJ N20 N 9.495 -1.178 23 7EJ C23 C 5.598 -0.428 24 7EJ C25 C 9.495 -2.678 25 7EJ C27 C 10.794 -3.428 26 7EJ N28 N 10.794 -4.928 27 7EJ C29 C 9.495 -5.678 28 7EJ C30 C 8.196 -4.928 29 7EJ C32 C 8.196 -3.428 30 7EJ C33 C 6.897 -5.678 31 7EJ O34 O 6.897 -7.178 32 7EJ N35 N 5.598 -4.928 33 7EJ C36 C 4.299 -5.678 34 7EJ C37 C 3.000 -4.928 35 7EJ O38 O 3.000 -3.428 36 7EJ C39 C 4.299 -2.678 37 7EJ C40 C 5.598 -3.428 38 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal 7EJ C16 C15 DOUBLE NONE 1 7EJ C16 C17 SINGLE NONE 2 7EJ C15 C14 SINGLE NONE 3 7EJ C17 C12 DOUBLE NONE 4 7EJ C14 C13 DOUBLE NONE 5 7EJ C12 C13 SINGLE NONE 6 7EJ C12 C11 SINGLE NONE 7 7EJ C10 C11 DOUBLE NONE 8 7EJ C10 C9 SINGLE NONE 9 7EJ C11 N7 SINGLE NONE 10 7EJ C9 C8 DOUBLE NONE 11 7EJ N7 C6 SINGLE NONE 12 7EJ N7 C8 SINGLE NONE 13 7EJ C6 C5 SINGLE NONE 14 7EJ C8 C18 SINGLE NONE 15 7EJ O19 C18 DOUBLE NONE 16 7EJ C18 N20 SINGLE NONE 17 7EJ C4 C5 SINGLE NONE 18 7EJ C4 C3 SINGLE NONE 19 7EJ C25 N20 SINGLE BEGINDASH 20 7EJ N20 C21 SINGLE NONE 21 7EJ O2 C3 SINGLE NONE 22 7EJ O2 C1 SINGLE NONE 23 7EJ C32 C25 SINGLE NONE 24 7EJ C32 C30 SINGLE NONE 25 7EJ C25 C27 SINGLE NONE 26 7EJ C21 C22 SINGLE NONE 27 7EJ C36 N35 SINGLE NONE 28 7EJ C36 C37 SINGLE NONE 29 7EJ C30 C33 SINGLE BEGINDASH 30 7EJ C30 C29 SINGLE NONE 31 7EJ N35 C33 SINGLE NONE 32 7EJ N35 C40 SINGLE NONE 33 7EJ C33 O34 DOUBLE NONE 34 7EJ C23 C22 SINGLE NONE 35 7EJ C40 C39 SINGLE NONE 36 7EJ C22 C24 SINGLE NONE 37 7EJ C27 N28 SINGLE NONE 38 7EJ C37 O38 SINGLE NONE 39 7EJ O38 C39 SINGLE NONE 40 7EJ N28 C29 SINGLE NONE 41 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys 7EJ MurckoScaffold S1 scaffold 'O=C(N[C@@H]1CNC[C@H](C(=O)N2CCOCC2)C1)c1ccc(-c2ccccc2)[nH]1' InChI=1S/C21H26N4O3/c26-20(19-7-6-18(24-19)15-4-2-1-3-5-15)23-17-12-16(13-22-14-17)21(27)25-8-10-28-11-9-25/h1-7,16-17,22,24H,8-14H2,(H,23,26)/t16-,17+/m1/s1 UKRSMXVDGWAENU-SJORKVTESA-N 7EJ amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N 7EJ phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N 7EJ pyrrole F3 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal 7EJ C8 S1 1 7EJ C10 S1 1 7EJ C13 S1 1 7EJ C15 S1 1 7EJ C17 S1 1 7EJ N7 S1 1 7EJ C9 S1 1 7EJ C11 S1 1 7EJ C12 S1 1 7EJ C14 S1 1 7EJ C16 S1 1 7EJ C18 S1 1 7EJ O19 S1 1 7EJ N20 S1 1 7EJ C25 S1 1 7EJ C27 S1 1 7EJ N28 S1 1 7EJ C29 S1 1 7EJ C30 S1 1 7EJ C32 S1 1 7EJ C33 S1 1 7EJ O34 S1 1 7EJ N35 S1 1 7EJ C36 S1 1 7EJ C37 S1 1 7EJ O38 S1 1 7EJ C39 S1 1 7EJ C40 S1 1 7EJ N20 F1 1 7EJ C18 F1 1 7EJ O19 F1 1 7EJ C8 F1 1 7EJ N35 F1 2 7EJ C33 F1 2 7EJ O34 F1 2 7EJ C30 F1 2 7EJ C13 F2 1 7EJ C14 F2 1 7EJ C15 F2 1 7EJ C16 F2 1 7EJ C17 F2 1 7EJ C12 F2 1 7EJ C8 F3 1 7EJ C9 F3 1 7EJ C10 F3 1 7EJ C11 F3 1 7EJ N7 F3 1 # _pdbe_chem_comp_rdkit_properties.comp_id 7EJ _pdbe_chem_comp_rdkit_properties.exactmw 524.336 _pdbe_chem_comp_rdkit_properties.amw 524.706 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 8 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 1 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14 _pdbe_chem_comp_rdkit_properties.NumHBD 1 _pdbe_chem_comp_rdkit_properties.NumHBA 6 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 38 _pdbe_chem_comp_rdkit_properties.NumAtoms 82 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 2 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.600 _pdbe_chem_comp_rdkit_properties.NumRings 4 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 2 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 3 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 288.691 _pdbe_chem_comp_rdkit_properties.tpsa 76.040 _pdbe_chem_comp_rdkit_properties.CrippenClogP 3.082 _pdbe_chem_comp_rdkit_properties.CrippenMR 147.428 _pdbe_chem_comp_rdkit_properties.chi0v 18.422 _pdbe_chem_comp_rdkit_properties.chi1v 9.684 _pdbe_chem_comp_rdkit_properties.chi2v 4.075 _pdbe_chem_comp_rdkit_properties.chi3v 4.075 _pdbe_chem_comp_rdkit_properties.chi4v 2.628 _pdbe_chem_comp_rdkit_properties.chi0n 62.422 _pdbe_chem_comp_rdkit_properties.chi1n 31.632 _pdbe_chem_comp_rdkit_properties.chi2n 4.075 _pdbe_chem_comp_rdkit_properties.chi3n 4.075 _pdbe_chem_comp_rdkit_properties.chi4n 2.628 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.680 _pdbe_chem_comp_rdkit_properties.kappa1 6.139 _pdbe_chem_comp_rdkit_properties.kappa2 13.919 _pdbe_chem_comp_rdkit_properties.kappa3 7.039 _pdbe_chem_comp_rdkit_properties.Phi 2.249 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id 7EJ UniChem ChEMBL CHEMBL4128929 7EJ UniChem PDBe 7EJ 7EJ UniChem SureChEMBL SCHEMBL7951491 7EJ UniChem PubChem 58355693 7EJ UniChem BindingDb 50273203 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal 7EJ C4 -3.380 -2.305 0.069 ETKDGv3 1 7EJ C5 -2.973 -1.108 -0.796 ETKDGv3 2 7EJ C6 -2.778 0.147 0.061 ETKDGv3 3 7EJ C8 -1.362 1.532 -1.611 ETKDGv3 4 7EJ C10 -2.902 3.076 -2.151 ETKDGv3 5 7EJ C13 -5.139 3.910 -0.141 ETKDGv3 6 7EJ C15 -7.351 3.054 0.434 ETKDGv3 7 7EJ C17 -5.693 1.571 -0.572 ETKDGv3 8 7EJ C21 0.704 1.317 0.697 ETKDGv3 9 7EJ C22 1.331 2.646 0.208 ETKDGv3 10 7EJ C24 2.711 2.441 -0.427 ETKDGv3 11 7EJ C1 -5.210 -4.925 0.051 ETKDGv3 12 7EJ O2 -3.820 -4.682 0.056 ETKDGv3 13 7EJ C3 -3.509 -3.578 -0.773 ETKDGv3 14 7EJ N7 -2.506 1.315 -0.780 ETKDGv3 15 7EJ C9 -1.572 2.551 -2.435 ETKDGv3 16 7EJ C11 -3.436 2.320 -1.200 ETKDGv3 17 7EJ C12 -4.776 2.553 -0.622 ETKDGv3 18 7EJ C14 -6.357 4.145 0.362 ETKDGv3 19 7EJ C16 -7.036 1.832 -0.011 ETKDGv3 20 7EJ C18 -0.133 0.715 -1.613 ETKDGv3 21 7EJ O19 0.369 0.376 -2.718 ETKDGv3 22 7EJ N20 0.521 0.330 -0.388 ETKDGv3 23 7EJ C23 1.434 3.637 1.374 ETKDGv3 24 7EJ C25 1.071 -1.040 -0.280 ETKDGv3 25 7EJ C27 0.563 -1.778 0.993 ETKDGv3 26 7EJ N28 1.652 -2.221 1.876 ETKDGv3 27 7EJ C29 2.620 -3.078 1.174 ETKDGv3 28 7EJ C30 3.152 -2.448 -0.143 ETKDGv3 29 7EJ C32 2.604 -1.031 -0.379 ETKDGv3 30 7EJ C33 4.662 -2.486 -0.225 ETKDGv3 31 7EJ O34 5.217 -3.486 -0.755 ETKDGv3 32 7EJ N35 5.475 -1.404 0.262 ETKDGv3 33 7EJ C36 6.608 -0.960 -0.552 ETKDGv3 34 7EJ C37 6.993 0.470 -0.165 ETKDGv3 35 7EJ O38 7.211 0.567 1.229 ETKDGv3 36 7EJ C39 5.998 0.333 1.919 ETKDGv3 37 7EJ C40 5.505 -1.100 1.696 ETKDGv3 38 7EJ H1 -2.617 -2.471 0.860 ETKDGv3 39 7EJ H2 -4.353 -2.087 0.561 ETKDGv3 40 7EJ H3 -2.022 -1.343 -1.322 ETKDGv3 41 7EJ H4 -3.754 -0.920 -1.563 ETKDGv3 42 7EJ H5 -1.936 -0.012 0.758 ETKDGv3 43 7EJ H6 -3.672 0.329 0.692 ETKDGv3 44 7EJ H7 -3.377 3.918 -2.638 ETKDGv3 45 7EJ H8 -4.416 4.715 -0.188 ETKDGv3 46 7EJ H9 -8.334 3.247 0.843 ETKDGv3 47 7EJ H10 -5.476 0.585 -0.958 ETKDGv3 48 7EJ H11 1.336 0.893 1.506 ETKDGv3 49 7EJ H12 -0.285 1.540 1.149 ETKDGv3 50 7EJ H13 0.667 3.106 -0.554 ETKDGv3 51 7EJ H14 3.419 2.004 0.305 ETKDGv3 52 7EJ H15 2.637 1.776 -1.312 ETKDGv3 53 7EJ H16 3.119 3.414 -0.774 ETKDGv3 54 7EJ H17 -5.785 -4.025 0.363 ETKDGv3 55 7EJ H18 -5.546 -5.271 -0.951 ETKDGv3 56 7EJ H19 -5.431 -5.733 0.778 ETKDGv3 57 7EJ H20 -4.239 -3.423 -1.604 ETKDGv3 58 7EJ H21 -2.528 -3.784 -1.253 ETKDGv3 59 7EJ H22 -0.877 2.924 -3.176 ETKDGv3 60 7EJ H23 -6.618 5.134 0.717 ETKDGv3 61 7EJ H24 -7.764 1.033 0.035 ETKDGv3 62 7EJ H25 1.842 4.608 1.019 ETKDGv3 63 7EJ H26 2.098 3.238 2.171 ETKDGv3 64 7EJ H27 0.428 3.826 1.807 ETKDGv3 65 7EJ H28 0.706 -1.640 -1.146 ETKDGv3 66 7EJ H29 -0.038 -2.665 0.693 ETKDGv3 67 7EJ H30 -0.123 -1.136 1.583 ETKDGv3 68 7EJ H31 2.139 -1.386 2.275 ETKDGv3 69 7EJ H33 3.453 -3.317 1.870 ETKDGv3 70 7EJ H34 2.134 -4.052 0.943 ETKDGv3 71 7EJ H35 2.770 -3.072 -0.983 ETKDGv3 72 7EJ H36 2.907 -0.679 -1.390 ETKDGv3 73 7EJ H37 3.029 -0.333 0.368 ETKDGv3 74 7EJ H38 6.340 -0.984 -1.631 ETKDGv3 75 7EJ H39 7.473 -1.638 -0.383 ETKDGv3 76 7EJ H40 6.210 1.189 -0.502 ETKDGv3 77 7EJ H41 7.933 0.741 -0.690 ETKDGv3 78 7EJ H42 6.176 0.483 3.005 ETKDGv3 79 7EJ H43 5.218 1.066 1.616 ETKDGv3 80 7EJ H44 4.498 -1.198 2.144 ETKDGv3 81 7EJ H45 6.189 -1.812 2.206 ETKDGv3 82 #