data_7FM
#
_chem_comp.id 7FM
_chem_comp.name
25-(methylsulfonyl)-8-(trifluoromethyl)-5,17,18,21,22,23,24,25-octahydro-12H-7,11-(azeno)-16,13-(metheno)pyrido[3,2-i]pyrrolo[1,2-q][1,3,7,11,17]pentaazacyclohenicosin-20(6H)-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H26 F3 N7 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2016-10-18
_chem_comp.pdbx_modified_date 2016-12-16
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 561.579
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 7FM
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5TO8
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
7FM C10 C1 C 0 1 Y N N N N N -2.061 -10.359 40.570 -0.866 2.416 -1.232 C10 7FM 1
7FM C13 C2 C 0 1 Y N N N N N -3.117 -11.795 42.672 -2.783 2.849 0.713 C13 7FM 2
7FM C17 C3 C 0 1 N N N N N N -3.864 -12.610 43.680 -3.997 2.892 1.617 C17 7FM 3
7FM C20 C4 C 0 1 Y N N N N N -0.697 -10.329 36.575 1.375 -2.572 0.144 C20 7FM 4
7FM C21 C5 C 0 1 Y N N N N N -1.821 -10.908 35.989 0.209 -3.327 0.125 C21 7FM 5
7FM C24 C6 C 0 1 Y N N N N N -1.660 -8.194 35.953 2.599 -4.574 -0.254 C24 7FM 6
7FM N01 N1 N 0 1 Y N N N N N 2.030 -9.034 41.465 2.974 3.601 0.081 N01 7FM 7
7FM C02 C7 C 0 1 Y N N N N N 0.939 -9.668 41.012 1.773 3.068 -0.063 C02 7FM 8
7FM N03 N2 N 0 1 Y N N N N N 0.798 -10.080 39.725 1.600 1.760 -0.190 N03 7FM 9
7FM C04 C8 C 0 1 Y N N N N N 1.772 -9.843 38.830 2.646 0.939 -0.184 C04 7FM 10
7FM C05 C9 C 0 1 Y N N N N N 2.920 -9.193 39.233 3.928 1.479 -0.069 C05 7FM 11
7FM C06 C10 C 0 1 Y N N N N N 2.991 -8.802 40.558 4.062 2.845 0.078 C06 7FM 12
7FM C07 C11 C 0 1 N N N N N N 4.034 -8.869 38.315 5.143 0.588 -0.105 C07 7FM 13
7FM N08 N3 N 0 1 N N N N N N -0.083 -9.881 41.951 0.655 3.899 -0.046 N08 7FM 14
7FM C09 C12 C 0 1 Y N N N N N -1.338 -10.467 41.776 -0.599 3.280 -0.189 C09 7FM 15
7FM C11 C13 C 0 1 Y N N N N N -3.302 -10.967 40.424 -2.072 1.755 -1.302 C11 7FM 16
7FM C12 C14 C 0 1 Y N N N N N -3.829 -11.687 41.476 -3.038 1.949 -0.310 C12 7FM 17
7FM C14 C15 C 0 1 Y N N N N N -1.880 -11.195 42.837 -1.577 3.515 0.780 C14 7FM 18
7FM N15 N4 N 0 1 N N S N N N -5.040 -12.413 41.584 -4.282 1.321 -0.164 N15 7FM 19
7FM C16 C16 C 0 1 N N N N N N -5.246 -12.699 43.018 -4.972 1.866 1.017 C16 7FM 20
7FM N18 N5 N 0 1 N N N N N N 1.516 -10.293 37.549 2.476 -0.440 -0.290 N18 7FM 21
7FM C19 C17 C 0 1 N N N N N N 0.406 -11.143 37.209 1.330 -1.081 0.383 C19 7FM 22
7FM N22 N6 N 0 1 Y N N N N N -2.842 -10.220 35.405 0.237 -4.628 -0.113 N22 7FM 23
7FM C23 C18 C 0 1 Y N N N N N -2.736 -8.869 35.400 1.394 -5.243 -0.271 C23 7FM 24
7FM C25 C19 C 0 1 Y N N N N N -0.624 -8.933 36.538 2.588 -3.199 -0.060 C25 7FM 25
7FM N26 N7 N 0 1 N N N N N N -1.967 -12.341 35.995 -1.021 -2.679 0.334 N26 7FM 26
7FM C27 C20 C 0 1 N N N N N N -2.568 -13.087 37.155 -2.255 -3.527 0.226 C27 7FM 27
7FM S28 S1 S 0 1 N N N N N N -1.469 -13.193 34.567 -1.117 -1.063 0.682 S28 7FM 28
7FM C29 C21 C 0 1 N N N N N N -4.044 -12.731 37.348 -3.488 -2.664 0.499 C29 7FM 29
7FM C30 C22 C 0 1 N N N N N N -5.967 -12.865 40.643 -4.787 0.367 -0.949 C30 7FM 30
7FM O31 O1 O 0 1 N N N N N N -6.972 -13.505 40.969 -4.996 0.627 -2.115 O31 7FM 31
7FM C32 C23 C 0 1 N N N N N N -4.620 -13.413 38.590 -3.935 -1.950 -0.776 C32 7FM 32
7FM C33 C24 C 0 1 N N N N N N -5.801 -12.620 39.151 -5.105 -1.012 -0.454 C33 7FM 33
7FM O34 O2 O 0 1 N N N N N N -0.552 -12.369 33.794 -2.481 -0.858 1.022 O34 7FM 34
7FM O35 O3 O 0 1 N N N N N N -1.143 -14.564 34.890 -0.083 -0.848 1.633 O35 7FM 35
7FM C36 C25 C 0 1 N N N N N N -3.053 -13.214 33.759 -0.721 -0.239 -0.885 C36 7FM 36
7FM F37 F1 F 0 1 N N N N N N 5.049 -8.144 38.871 6.297 1.367 0.028 F37 7FM 37
7FM F38 F2 F 0 1 N N N N N N 4.612 -9.943 37.739 5.077 -0.332 0.947 F38 7FM 38
7FM F39 F3 F 0 1 N N N N N N 3.535 -8.108 37.310 5.182 -0.099 -1.323 F39 7FM 39
7FM H1 H1 H 0 1 N N N N N N -1.644 -9.796 39.748 -0.125 2.261 -2.002 H1 7FM 40
7FM H2 H2 H 0 1 N N N N N N -3.413 -13.605 43.809 -3.725 2.601 2.632 H2 7FM 41
7FM H3 H3 H 0 1 N N N N N N -3.915 -12.101 44.654 -4.438 3.889 1.613 H3 7FM 42
7FM H4 H4 H 0 1 N N N N N N -1.621 -7.115 35.933 3.529 -5.107 -0.389 H4 7FM 43
7FM H5 H5 H 0 1 N N N N N N 3.877 -8.276 40.883 5.039 3.290 0.187 H5 7FM 44
7FM H6 H6 H 0 1 N N N N N N 0.117 -9.568 42.879 0.738 4.860 0.060 H6 7FM 45
7FM H7 H7 H 0 1 N N N N N N -3.848 -10.877 39.497 -2.273 1.085 -2.126 H7 7FM 46
7FM H8 H8 H 0 1 N N N N N N -1.344 -11.288 43.770 -1.392 4.222 1.574 H8 7FM 47
7FM H9 H9 H 0 1 N N N N N N -5.928 -11.958 43.460 -5.175 1.072 1.736 H9 7FM 48
7FM H10 H10 H 0 1 N N N N N N -5.666 -13.707 43.148 -5.900 2.355 0.721 H10 7FM 49
7FM H11 H11 H 0 1 N N N N N N 2.336 -10.790 37.266 3.105 -0.974 -0.801 H11 7FM 50
7FM H12 H12 H 0 1 N N N N N N 0.024 -11.625 38.121 0.400 -0.677 -0.019 H12 7FM 51
7FM H13 H13 H 0 1 N N N N N N 0.742 -11.914 36.500 1.379 -0.883 1.453 H13 7FM 52
7FM H14 H14 H 0 1 N N N N N N -3.527 -8.292 34.944 1.397 -6.313 -0.420 H14 7FM 53
7FM H15 H15 H 0 1 N N N N N N 0.231 -8.425 36.960 3.507 -2.633 -0.068 H15 7FM 54
7FM H16 H16 H 0 1 N N N N N N -2.483 -14.168 36.968 -2.326 -3.943 -0.779 H16 7FM 55
7FM H17 H17 H 0 1 N N N N N N -2.016 -12.829 38.071 -2.209 -4.335 0.956 H17 7FM 56
7FM H18 H18 H 0 1 N N N N N N -4.138 -11.641 37.461 -4.298 -3.299 0.858 H18 7FM 57
7FM H19 H19 H 0 1 N N N N N N -4.611 -13.058 36.464 -3.246 -1.923 1.261 H19 7FM 58
7FM H20 H20 H 0 1 N N N N N N -4.961 -14.424 38.320 -3.104 -1.369 -1.178 H20 7FM 59
7FM H21 H21 H 0 1 N N N N N N -3.836 -13.483 39.358 -4.252 -2.687 -1.514 H21 7FM 60
7FM H22 H22 H 0 1 N N N N N N -5.627 -11.547 38.980 -5.263 -0.984 0.624 H22 7FM 61
7FM H23 H23 H 0 1 N N N N N N -6.720 -12.929 38.632 -6.008 -1.375 -0.945 H23 7FM 62
7FM H24 H24 H 0 1 N N N N N N -3.752 -13.835 34.338 -0.008 -0.845 -1.445 H24 7FM 63
7FM H25 H25 H 0 1 N N N N N N -3.444 -12.188 33.692 -1.632 -0.116 -1.471 H25 7FM 64
7FM H26 H26 H 0 1 N N N N N N -2.943 -13.631 32.747 -0.285 0.739 -0.682 H26 7FM 65
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
7FM C36 S28 SING N N 1
7FM O34 S28 DOUB N N 2
7FM S28 O35 DOUB N N 3
7FM S28 N26 SING N N 4
7FM C23 N22 DOUB Y N 5
7FM C23 C24 SING Y N 6
7FM N22 C21 SING Y N 7
7FM C24 C25 DOUB Y N 8
7FM C21 N26 SING N N 9
7FM C21 C20 DOUB Y N 10
7FM N26 C27 SING N N 11
7FM C25 C20 SING Y N 12
7FM C20 C19 SING N N 13
7FM C27 C29 SING N N 14
7FM C19 N18 SING N N 15
7FM F39 C07 SING N N 16
7FM C29 C32 SING N N 17
7FM N18 C04 SING N N 18
7FM F38 C07 SING N N 19
7FM C07 F37 SING N N 20
7FM C07 C05 SING N N 21
7FM C32 C33 SING N N 22
7FM C04 C05 DOUB Y N 23
7FM C04 N03 SING Y N 24
7FM C33 C30 SING N N 25
7FM C05 C06 SING Y N 26
7FM N03 C02 DOUB Y N 27
7FM C11 C10 DOUB Y N 28
7FM C11 C12 SING Y N 29
7FM C06 N01 DOUB Y N 30
7FM C10 C09 SING Y N 31
7FM C30 O31 DOUB N N 32
7FM C30 N15 SING N N 33
7FM C02 N01 SING Y N 34
7FM C02 N08 SING N N 35
7FM C12 N15 SING N N 36
7FM C12 C13 DOUB Y N 37
7FM N15 C16 SING N N 38
7FM C09 N08 SING N N 39
7FM C09 C14 DOUB Y N 40
7FM C13 C14 SING Y N 41
7FM C13 C17 SING N N 42
7FM C16 C17 SING N N 43
7FM C10 H1 SING N N 44
7FM C17 H2 SING N N 45
7FM C17 H3 SING N N 46
7FM C24 H4 SING N N 47
7FM C06 H5 SING N N 48
7FM N08 H6 SING N N 49
7FM C11 H7 SING N N 50
7FM C14 H8 SING N N 51
7FM C16 H9 SING N N 52
7FM C16 H10 SING N N 53
7FM N18 H11 SING N N 54
7FM C19 H12 SING N N 55
7FM C19 H13 SING N N 56
7FM C23 H14 SING N N 57
7FM C25 H15 SING N N 58
7FM C27 H16 SING N N 59
7FM C27 H17 SING N N 60
7FM C29 H18 SING N N 61
7FM C29 H19 SING N N 62
7FM C32 H20 SING N N 63
7FM C32 H21 SING N N 64
7FM C33 H22 SING N N 65
7FM C33 H23 SING N N 66
7FM C36 H24 SING N N 67
7FM C36 H25 SING N N 68
7FM C36 H26 SING N N 69
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
7FM SMILES ACDLabs 12.01 c4c2Nc1ncc(c(n1)NCc5c(N(CCCCC(N3c(c(c2)CC3)c4)=O)S(=O)(=O)C)nccc5)C(F)(F)F
7FM InChI InChI 1.03 InChI=1S/C25H26F3N7O3S/c1-39(37,38)35-11-3-2-6-21(36)34-12-9-16-13-18(7-8-20(16)34)32-24-31-15-19(25(26,27)28)22(33-24)30-14-17-5-4-10-29-23(17)35/h4-5,7-8,10,13,15H,2-3,6,9,11-12,14H2,1H3,(H2,30,31,32,33)
7FM InChIKey InChI 1.03 FOLRUTAUDNCQAE-UHFFFAOYSA-N
7FM SMILES_CANONICAL CACTVS 3.385 C[S](=O)(=O)N1CCCCC(=O)[N@]2CCc3cc(Nc4ncc(c(NCc5cccnc15)n4)C(F)(F)F)ccc23
7FM SMILES CACTVS 3.385 C[S](=O)(=O)N1CCCCC(=O)[N]2CCc3cc(Nc4ncc(c(NCc5cccnc15)n4)C(F)(F)F)ccc23
7FM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CS(=O)(=O)N1CCCCC(=O)N2CCc3c2ccc(c3)Nc4ncc(c(n4)NCc5c1nccc5)C(F)(F)F
7FM SMILES "OpenEye OEToolkits" 2.0.6 CS(=O)(=O)N1CCCCC(=O)N2CCc3c2ccc(c3)Nc4ncc(c(n4)NCc5c1nccc5)C(F)(F)F
#
_pdbx_chem_comp_identifier.comp_id 7FM
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier
25-(methylsulfonyl)-8-(trifluoromethyl)-5,17,18,21,22,23,24,25-octahydro-12H-7,11-(azeno)-16,13-(metheno)pyrido[3,2-i]pyrrolo[1,2-q][1,3,7,11,17]pentaazacyclohenicosin-20(6H)-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
7FM 'Create component' 2016-10-18 RCSB
7FM 'Initial release' 2016-12-21 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
7FM C10 C 6.704 0.860 1
7FM C13 C 4.106 -0.640 2
7FM C17 C 3.000 -1.641 3
7FM C20 C 14.011 0.065 4
7FM C21 C 14.297 -1.408 5
7FM C24 C 16.656 0.609 6
7FM N01 N 8.086 2.949 7
7FM C02 C 7.996 1.428 8
7FM N03 N 9.345 2.084 9
7FM C04 C 10.588 1.245 10
7FM C05 C 10.712 2.764 11
7FM C06 C 9.453 3.621 12
7FM C07 C 11.561 4.000 13
7FM N08 N 6.753 2.267 14
7FM C09 C 5.404 1.610 15
7FM C11 C 6.704 -0.640 16
7FM C12 C 5.404 -1.390 17
7FM C14 C 4.106 0.860 18
7FM N15 N 5.091 -2.848 19
7FM C16 C 3.608 -3.002 20
7FM N18 N 11.936 1.902 21
7FM C19 C 12.593 0.553 22
7FM N22 N 15.766 -1.940 23
7FM C23 C 16.953 -0.925 24
7FM C25 C 15.175 1.107 25
7FM N26 N 13.164 -2.392 26
7FM C27 C 11.668 -2.286 27
7FM S28 S 13.640 -3.814 28
7FM C29 C 10.536 -3.270 29
7FM C30 C 6.334 -3.687 30
7FM O31 O 5.626 -5.010 31
7FM C32 C 9.117 -2.781 32
7FM C33 C 7.985 -3.764 33
7FM O34 O 15.062 -3.339 34
7FM O35 O 14.115 -5.237 35
7FM C36 C 12.217 -4.290 36
7FM F37 F 13.057 3.884 37
7FM F38 F 10.325 4.849 38
7FM F39 F 12.410 5.237 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
7FM C36 S28 SINGLE NONE 1
7FM O34 S28 DOUBLE NONE 2
7FM S28 O35 DOUBLE NONE 3
7FM S28 N26 SINGLE NONE 4
7FM C23 N22 DOUBLE NONE 5
7FM C23 C24 SINGLE NONE 6
7FM N22 C21 SINGLE NONE 7
7FM C24 C25 DOUBLE NONE 8
7FM C21 N26 SINGLE NONE 9
7FM C21 C20 DOUBLE NONE 10
7FM N26 C27 SINGLE NONE 11
7FM C25 C20 SINGLE NONE 12
7FM C20 C19 SINGLE NONE 13
7FM C27 C29 SINGLE NONE 14
7FM C19 N18 SINGLE NONE 15
7FM F39 C07 SINGLE NONE 16
7FM C29 C32 SINGLE NONE 17
7FM N18 C04 SINGLE NONE 18
7FM F38 C07 SINGLE NONE 19
7FM C07 F37 SINGLE NONE 20
7FM C07 C05 SINGLE NONE 21
7FM C32 C33 SINGLE NONE 22
7FM C04 C05 DOUBLE NONE 23
7FM C04 N03 SINGLE NONE 24
7FM C33 C30 SINGLE NONE 25
7FM C05 C06 SINGLE NONE 26
7FM N03 C02 DOUBLE NONE 27
7FM C11 C10 DOUBLE NONE 28
7FM C11 C12 SINGLE NONE 29
7FM C06 N01 DOUBLE NONE 30
7FM C10 C09 SINGLE NONE 31
7FM C30 O31 DOUBLE NONE 32
7FM C30 N15 SINGLE NONE 33
7FM C02 N01 SINGLE NONE 34
7FM C02 N08 SINGLE NONE 35
7FM C12 N15 SINGLE NONE 36
7FM C12 C13 DOUBLE NONE 37
7FM N15 C16 SINGLE NONE 38
7FM C09 N08 SINGLE NONE 39
7FM C09 C14 DOUBLE NONE 40
7FM C13 C14 SINGLE NONE 41
7FM C13 C17 SINGLE NONE 42
7FM C16 C17 SINGLE NONE 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
7FM MurckoScaffold S1 scaffold O=C1CCCCNc2ncccc2CNc2ccnc(n2)Nc2ccc3c(c2)CCN13 InChI=1S/C23H25N7O/c31-21-5-1-2-10-24-22-17(4-3-11-25-22)15-27-20-8-12-26-23(29-20)28-18-6-7-19-16(14-18)9-13-30(19)21/h3-4,6-8,11-12,14H,1-2,5,9-10,13,15H2,(H,24,25)(H2,26,27,28,29) WWWQQDNJBFRFFO-UHFFFAOYSA-N
7FM amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
7FM phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
7FM pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
7FM pyrimidine F4 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
7FM Z45654195 F5 fragment CS(=O)(=O)Nc1ccccn1 InChI=1S/C6H8N2O2S/c1-11(9,10)8-6-4-2-3-5-7-6/h2-5H,1H3,(H,7,8) VWJMXGHSQCIPPX-UHFFFAOYSA-N
7FM Z54628578 F6 fragment CNc1ncccn1 InChI=1S/C5H7N3/c1-6-5-7-3-2-4-8-5/h2-4H,1H3,(H,6,7,8) BQNXHDSGGRTFNX-UHFFFAOYSA-N
7FM Z1992316287 F7 fragment CCNc1ncccc1C InChI=1S/C8H12N2/c1-3-9-8-7(2)5-4-6-10-8/h4-6H,3H2,1-2H3,(H,9,10) DDVXXITYAVIOHO-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
7FM C10 S1 1
7FM C13 S1 1
7FM C17 S1 1
7FM C20 S1 1
7FM C21 S1 1
7FM C24 S1 1
7FM N01 S1 1
7FM C02 S1 1
7FM N03 S1 1
7FM C04 S1 1
7FM C05 S1 1
7FM C06 S1 1
7FM N08 S1 1
7FM C09 S1 1
7FM C11 S1 1
7FM C12 S1 1
7FM C14 S1 1
7FM N15 S1 1
7FM C16 S1 1
7FM N18 S1 1
7FM C19 S1 1
7FM N22 S1 1
7FM C23 S1 1
7FM C25 S1 1
7FM N26 S1 1
7FM C27 S1 1
7FM C29 S1 1
7FM C30 S1 1
7FM O31 S1 1
7FM C32 S1 1
7FM C33 S1 1
7FM N15 F1 1
7FM C30 F1 1
7FM O31 F1 1
7FM C33 F1 1
7FM C10 F2 1
7FM C11 F2 1
7FM C12 F2 1
7FM C13 F2 1
7FM C14 F2 1
7FM C09 F2 1
7FM C21 F3 1
7FM C20 F3 1
7FM C25 F3 1
7FM C24 F3 1
7FM C23 F3 1
7FM N22 F3 1
7FM C05 F4 1
7FM C04 F4 1
7FM N03 F4 1
7FM C02 F4 1
7FM N01 F4 1
7FM C06 F4 1
7FM C36 F5 1
7FM S28 F5 1
7FM O34 F5 1
7FM O35 F5 1
7FM N26 F5 1
7FM C21 F5 1
7FM C20 F5 1
7FM C25 F5 1
7FM C24 F5 1
7FM C23 F5 1
7FM N22 F5 1
7FM C09 F6 1
7FM N08 F6 1
7FM C02 F6 1
7FM N03 F6 1
7FM C04 F6 1
7FM C05 F6 1
7FM C06 F6 1
7FM N01 F6 1
7FM C29 F7 1
7FM C27 F7 1
7FM N26 F7 1
7FM C21 F7 1
7FM N22 F7 1
7FM C23 F7 1
7FM C24 F7 1
7FM C25 F7 1
7FM C20 F7 1
7FM C19 F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 7FM
_pdbe_chem_comp_rdkit_properties.exactmw 561.177
_pdbe_chem_comp_rdkit_properties.amw 561.590
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 2
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 39
_pdbe_chem_comp_rdkit_properties.NumAtoms 65
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.360
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 6
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.labuteASA 259.526
_pdbe_chem_comp_rdkit_properties.tpsa 120.420
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.018
_pdbe_chem_comp_rdkit_properties.CrippenMR 135.502
_pdbe_chem_comp_rdkit_properties.chi0v 19.214
_pdbe_chem_comp_rdkit_properties.chi1v 11.285
_pdbe_chem_comp_rdkit_properties.chi2v 5.161
_pdbe_chem_comp_rdkit_properties.chi3v 5.161
_pdbe_chem_comp_rdkit_properties.chi4v 3.365
_pdbe_chem_comp_rdkit_properties.chi0n 44.397
_pdbe_chem_comp_rdkit_properties.chi1n 22.740
_pdbe_chem_comp_rdkit_properties.chi2n 4.416
_pdbe_chem_comp_rdkit_properties.chi3n 4.416
_pdbe_chem_comp_rdkit_properties.chi4n 2.840
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.940
_pdbe_chem_comp_rdkit_properties.kappa1 9.609
_pdbe_chem_comp_rdkit_properties.kappa2 10.320
_pdbe_chem_comp_rdkit_properties.kappa3 5.745
_pdbe_chem_comp_rdkit_properties.Phi 2.543
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
7FM UniChem ChEMBL CHEMBL3889951
7FM UniChem PDBe 7FM
7FM UniChem ZINC ZINC000584905367
7FM UniChem PubChem 134130812
7FM UniChem BindingDb 50207361
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
7FM C10 2.590 1.518 -0.431 ETKDGv3 1
7FM C13 3.452 -0.458 1.355 ETKDGv3 2
7FM C17 3.653 -1.682 2.180 ETKDGv3 3
7FM C20 -2.573 0.329 -1.467 ETKDGv3 4
7FM C21 -2.524 -0.939 -0.989 ETKDGv3 5
7FM C24 -4.708 -0.151 -2.560 ETKDGv3 6
7FM N01 0.626 4.865 1.858 ETKDGv3 7
7FM C02 1.050 3.625 1.278 ETKDGv3 8
7FM N03 0.200 2.911 0.604 ETKDGv3 9
7FM C04 -1.164 3.314 0.407 ETKDGv3 10
7FM C05 -1.584 4.490 0.935 ETKDGv3 11
7FM C06 -0.594 5.288 1.708 ETKDGv3 12
7FM C07 -3.003 4.993 0.779 ETKDGv3 13
7FM N08 2.377 3.133 1.513 ETKDGv3 14
7FM C09 2.795 1.857 1.008 ETKDGv3 15
7FM C11 2.782 0.266 -0.870 ETKDGv3 16
7FM C12 3.221 -0.765 0.094 ETKDGv3 17
7FM C14 3.255 0.917 1.855 ETKDGv3 18
7FM N15 3.197 -2.169 -0.112 ETKDGv3 19
7FM C16 3.391 -2.826 1.179 ETKDGv3 20
7FM N18 -2.045 2.425 -0.305 ETKDGv3 21
7FM C19 -1.514 1.365 -1.167 ETKDGv3 22
7FM N22 -3.597 -1.854 -1.279 ETKDGv3 23
7FM C23 -4.620 -1.512 -2.005 ETKDGv3 24
7FM C25 -3.732 0.724 -2.303 ETKDGv3 25
7FM N26 -1.423 -1.402 -0.197 ETKDGv3 26
7FM C27 -0.208 -1.906 -0.840 ETKDGv3 27
7FM S28 -1.565 -1.435 1.532 ETKDGv3 28
7FM C29 -0.392 -3.364 -1.279 ETKDGv3 29
7FM C30 2.907 -2.825 -1.357 ETKDGv3 30
7FM O31 3.342 -2.335 -2.433 ETKDGv3 31
7FM C32 0.758 -3.883 -2.163 ETKDGv3 32
7FM C33 2.089 -4.088 -1.413 ETKDGv3 33
7FM O34 -3.003 -1.251 1.929 ETKDGv3 34
7FM O35 -1.085 -2.762 2.051 ETKDGv3 35
7FM C36 -0.590 -0.129 2.242 ETKDGv3 36
7FM F37 -3.135 6.280 1.269 ETKDGv3 37
7FM F38 -3.868 4.170 1.478 ETKDGv3 38
7FM F39 -3.357 5.005 -0.559 ETKDGv3 39
7FM H1 2.254 2.280 -1.123 ETKDGv3 40
7FM H2 4.695 -1.716 2.565 ETKDGv3 41
7FM H3 2.925 -1.710 3.019 ETKDGv3 42
7FM H4 -5.556 0.136 -3.168 ETKDGv3 43
7FM H5 -0.878 6.228 2.163 ETKDGv3 44
7FM H6 2.957 3.604 2.244 ETKDGv3 45
7FM H7 2.584 0.022 -1.904 ETKDGv3 46
7FM H8 3.370 1.130 2.910 ETKDGv3 47
7FM H9 4.256 -3.522 1.130 ETKDGv3 48
7FM H10 2.471 -3.373 1.476 ETKDGv3 49
7FM H11 -3.080 2.546 -0.241 ETKDGv3 50
7FM H12 -1.165 1.815 -2.120 ETKDGv3 51
7FM H13 -0.629 0.899 -0.688 ETKDGv3 52
7FM H14 -5.406 -2.229 -2.201 ETKDGv3 53
7FM H15 -3.793 1.727 -2.707 ETKDGv3 54
7FM H16 0.627 -1.849 -0.118 ETKDGv3 55
7FM H17 0.048 -1.269 -1.714 ETKDGv3 56
7FM H18 -1.331 -3.443 -1.868 ETKDGv3 57
7FM H19 -0.505 -4.014 -0.385 ETKDGv3 58
7FM H20 0.894 -3.218 -3.043 ETKDGv3 59
7FM H21 0.443 -4.872 -2.562 ETKDGv3 60
7FM H22 2.688 -4.849 -1.958 ETKDGv3 61
7FM H23 1.897 -4.502 -0.403 ETKDGv3 62
7FM H24 -1.076 0.846 2.038 ETKDGv3 63
7FM H25 0.424 -0.137 1.795 ETKDGv3 64
7FM H26 -0.512 -0.275 3.338 ETKDGv3 65
#