data_7FX # _chem_comp.id 7FX _chem_comp.name "[2,4-bis(oxidanyl)phenyl]-[(7~{S})-7-(trifluoromethyl)-6,7-dihydro-5~{H}-pyrazolo[1,5-a]pyrimidin-4-yl]methanone" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H12 F3 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-10-19 _chem_comp.pdbx_modified_date 2017-02-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 327.259 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7FX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5M4H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7FX C01 C1 C 0 1 N N N N N N 30.706 7.943 27.182 -0.001 0.846 0.879 C01 7FX 1 7FX C02 C2 C 0 1 N N S N N N 32.592 6.484 26.380 -2.490 0.848 0.561 C02 7FX 2 7FX C03 C3 C 0 1 Y N N N N N 31.340 7.965 24.823 -1.156 -1.258 0.444 C03 7FX 3 7FX C04 C4 C 0 1 N N N N N N 32.128 5.038 26.563 -3.616 1.314 -0.365 C04 7FX 4 7FX C05 C5 C 0 1 N N N N N N 32.060 7.338 27.527 -1.169 1.495 0.129 C05 7FX 5 7FX C06 C6 C 0 1 Y N N N N N 31.168 7.985 23.498 -1.404 -2.582 0.358 C06 7FX 6 7FX C07 C7 C 0 1 Y N N N N N 31.939 7.067 22.928 -2.794 -2.753 0.336 C07 7FX 7 7FX N08 N1 N 0 1 N N N N N N 30.788 8.633 25.860 0.066 -0.580 0.500 N08 7FX 8 7FX N09 N2 N 0 1 Y N N N N N 32.546 6.406 23.902 -3.360 -1.572 0.406 N09 7FX 9 7FX N13 N3 N 0 1 Y N N N N N 32.174 6.970 25.058 -2.356 -0.608 0.474 N13 7FX 10 7FX C14 C8 C 0 1 Y N N N N N 30.245 10.493 24.509 2.484 -0.412 0.191 C14 7FX 11 7FX C15 C9 C 0 1 Y N N N N N 31.519 10.843 24.071 2.805 0.446 1.248 C15 7FX 12 7FX C16 C10 C 0 1 Y N N N N N 31.700 11.542 22.886 3.972 1.173 1.214 C16 7FX 13 7FX C17 C11 C 0 1 Y N N N N N 30.587 11.891 22.138 4.837 1.057 0.129 C17 7FX 14 7FX C18 C12 C 0 1 Y N N N N N 29.312 11.533 22.591 4.529 0.209 -0.924 C18 7FX 15 7FX C19 C13 C 0 1 Y N N N N N 29.155 10.829 23.788 3.360 -0.531 -0.898 C19 7FX 16 7FX O20 O1 O 0 1 N N N N N N 27.943 10.454 24.279 3.057 -1.361 -1.928 O20 7FX 17 7FX O21 O2 O 0 1 N N N N N N 30.732 12.576 20.972 5.984 1.782 0.100 O21 7FX 18 7FX C22 C14 C 0 1 N N N N N N 30.137 9.784 25.723 1.235 -1.191 0.225 C22 7FX 19 7FX O23 O3 O 0 1 N N N N N N 29.522 10.230 26.688 1.258 -2.387 0.003 O23 7FX 20 7FX F10 F1 F 0 1 N N N N N N 30.800 5.001 26.613 -3.322 0.941 -1.681 F10 7FX 21 7FX F11 F2 F 0 1 N N N N N N 32.554 4.303 25.540 -4.820 0.723 0.030 F11 7FX 22 7FX F12 F3 F 0 1 N N N N N N 32.627 4.552 27.695 -3.734 2.707 -0.291 F12 7FX 23 7FX H1 H1 H 0 1 N N N N N N 30.421 8.670 27.957 0.931 1.341 0.604 H1 7FX 24 7FX H2 H2 H 0 1 N N N N N N 29.950 7.145 27.132 -0.160 0.935 1.953 H2 7FX 25 7FX H3 H3 H 0 1 N N N N N N 33.691 6.496 26.429 -2.719 1.135 1.587 H3 7FX 26 7FX H4 H4 H 0 1 N N N N N N 31.954 6.709 28.423 -1.197 2.561 0.356 H4 7FX 27 7FX H5 H5 H 0 1 N N N N N N 32.774 8.150 27.731 -1.032 1.358 -0.943 H5 7FX 28 7FX H6 H6 H 0 1 N N N N N N 30.501 8.649 22.969 -0.664 -3.368 0.315 H6 7FX 29 7FX H7 H7 H 0 1 N N N N N N 32.050 6.892 21.868 -3.312 -3.698 0.272 H7 7FX 30 7FX H8 H8 H 0 1 N N N N N N 32.379 10.566 24.662 2.136 0.539 2.091 H8 7FX 31 7FX H9 H9 H 0 1 N N N N N N 32.692 11.810 22.552 4.218 1.835 2.030 H9 7FX 32 7FX H10 H10 H 0 1 N N N N N N 28.442 11.803 22.011 5.204 0.124 -1.763 H10 7FX 33 7FX H11 H11 H 0 1 N N N N N N 28.024 10.255 25.204 3.396 -2.261 -1.820 H11 7FX 34 7FX H12 H12 H 0 1 N N N N N N 31.654 12.738 20.812 5.890 2.651 -0.314 H12 7FX 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7FX O21 C17 SING N N 1 7FX C17 C18 DOUB Y N 2 7FX C17 C16 SING Y N 3 7FX C18 C19 SING Y N 4 7FX C16 C15 DOUB Y N 5 7FX C07 C06 SING Y N 6 7FX C07 N09 DOUB Y N 7 7FX C06 C03 DOUB Y N 8 7FX C19 O20 SING N N 9 7FX C19 C14 DOUB Y N 10 7FX N09 N13 SING Y N 11 7FX C15 C14 SING Y N 12 7FX C14 C22 SING N N 13 7FX C03 N13 SING Y N 14 7FX C03 N08 SING N N 15 7FX N13 C02 SING N N 16 7FX F11 C04 SING N N 17 7FX C22 N08 SING N N 18 7FX C22 O23 DOUB N N 19 7FX N08 C01 SING N N 20 7FX C02 C04 SING N N 21 7FX C02 C05 SING N N 22 7FX C04 F10 SING N N 23 7FX C04 F12 SING N N 24 7FX C01 C05 SING N N 25 7FX C01 H1 SING N N 26 7FX C01 H2 SING N N 27 7FX C02 H3 SING N N 28 7FX C05 H4 SING N N 29 7FX C05 H5 SING N N 30 7FX C06 H6 SING N N 31 7FX C07 H7 SING N N 32 7FX C15 H8 SING N N 33 7FX C16 H9 SING N N 34 7FX C18 H10 SING N N 35 7FX O20 H11 SING N N 36 7FX O21 H12 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7FX InChI InChI 1.03 InChI=1S/C14H12F3N3O3/c15-14(16,17)11-4-6-19(12-3-5-18-20(11)12)13(23)9-2-1-8(21)7-10(9)22/h1-3,5,7,11,21-22H,4,6H2/t11-/m0/s1 7FX InChIKey InChI 1.03 LQNBNBOAGAFNTE-NSHDSACASA-N 7FX SMILES_CANONICAL CACTVS 3.385 Oc1ccc(c(O)c1)C(=O)N2CC[C@H](n3nccc23)C(F)(F)F 7FX SMILES CACTVS 3.385 Oc1ccc(c(O)c1)C(=O)N2CC[CH](n3nccc23)C(F)(F)F 7FX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1cc(c(cc1O)O)C(=O)N2CC[C@H](n3c2ccn3)C(F)(F)F 7FX SMILES "OpenEye OEToolkits" 2.0.6 c1cc(c(cc1O)O)C(=O)N2CCC(n3c2ccn3)C(F)(F)F # _pdbx_chem_comp_identifier.comp_id 7FX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "[2,4-bis(oxidanyl)phenyl]-[(7~{S})-7-(trifluoromethyl)-6,7-dihydro-5~{H}-pyrazolo[1,5-a]pyrimidin-4-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7FX 'Create component' 2016-10-19 EBI 7FX 'Initial release' 2017-02-22 RCSB # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal 7FX C01 C 7.702 -0.465 1 7FX C02 C 9.002 -2.715 2 7FX C03 C 10.301 -0.465 3 7FX C04 C 9.002 -4.215 4 7FX C05 C 7.702 -1.965 5 7FX C06 C 11.720 -0.008 6 7FX C07 C 12.595 -1.215 7 7FX N08 N 9.002 0.285 8 7FX N09 N 11.720 -2.422 9 7FX N13 N 10.301 -1.965 10 7FX C14 C 7.702 2.535 11 7FX C15 C 6.404 1.785 12 7FX C16 C 5.104 2.535 13 7FX C17 C 5.104 4.035 14 7FX C18 C 6.404 4.785 15 7FX C19 C 7.702 4.035 16 7FX O20 O 9.002 4.785 17 7FX O21 O 3.805 4.785 18 7FX C22 C 9.002 1.785 19 7FX O23 O 10.301 2.535 20 7FX F10 F 9.002 -5.715 21 7FX F11 F 7.502 -4.215 22 7FX F12 F 10.502 -4.215 23 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal 7FX O21 C17 SINGLE NONE 1 7FX C17 C18 DOUBLE NONE 2 7FX C17 C16 SINGLE NONE 3 7FX C18 C19 SINGLE NONE 4 7FX C16 C15 DOUBLE NONE 5 7FX C07 C06 SINGLE NONE 6 7FX C07 N09 DOUBLE NONE 7 7FX C06 C03 DOUBLE NONE 8 7FX C19 O20 SINGLE NONE 9 7FX C19 C14 DOUBLE NONE 10 7FX N09 N13 SINGLE NONE 11 7FX C15 C14 SINGLE NONE 12 7FX C14 C22 SINGLE NONE 13 7FX C03 N13 SINGLE NONE 14 7FX C03 N08 SINGLE NONE 15 7FX N13 C02 SINGLE NONE 16 7FX F11 C04 SINGLE NONE 17 7FX C22 N08 SINGLE NONE 18 7FX C22 O23 DOUBLE NONE 19 7FX N08 C01 SINGLE NONE 20 7FX C02 C04 SINGLE BEGINDASH 21 7FX C02 C05 SINGLE NONE 22 7FX C04 F10 SINGLE NONE 23 7FX C04 F12 SINGLE NONE 24 7FX C01 C05 SINGLE NONE 25 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys 7FX MurckoScaffold S1 scaffold O=C(c1ccccc1)N1CCCn2nccc21 InChI=1S/C13H13N3O/c17-13(11-5-2-1-3-6-11)15-9-4-10-16-12(15)7-8-14-16/h1-3,5-8H,4,9-10H2 DQKLKGZJDGLDSR-UHFFFAOYSA-N 7FX amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N 7FX phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N 7FX pyrazole F3 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N 7FX Z1157794254 F4 fragment FC(F)(F)Cn1cccn1 InChI=1S/C5H5F3N2/c6-5(7,8)4-10-3-1-2-9-10/h1-3H,4H2 DNHVFNDOHJKATM-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal 7FX C01 S1 1 7FX C02 S1 1 7FX C03 S1 1 7FX C05 S1 1 7FX C06 S1 1 7FX C07 S1 1 7FX N08 S1 1 7FX N09 S1 1 7FX N13 S1 1 7FX C14 S1 1 7FX C15 S1 1 7FX C16 S1 1 7FX C17 S1 1 7FX C18 S1 1 7FX C19 S1 1 7FX C22 S1 1 7FX O23 S1 1 7FX N08 F1 1 7FX C22 F1 1 7FX O23 F1 1 7FX C14 F1 1 7FX C14 F2 1 7FX C19 F2 1 7FX C18 F2 1 7FX C17 F2 1 7FX C16 F2 1 7FX C15 F2 1 7FX C03 F3 1 7FX C06 F3 1 7FX C07 F3 1 7FX N09 F3 1 7FX N13 F3 1 7FX F10 F4 1 7FX C04 F4 1 7FX F11 F4 1 7FX F12 F4 1 7FX C02 F4 1 7FX N13 F4 1 7FX C03 F4 1 7FX C06 F4 1 7FX C07 F4 1 7FX N09 F4 1 # _pdbe_chem_comp_rdkit_properties.comp_id 7FX _pdbe_chem_comp_rdkit_properties.exactmw 327.083 _pdbe_chem_comp_rdkit_properties.amw 327.262 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 6 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 2 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 3 _pdbe_chem_comp_rdkit_properties.NumHBD 2 _pdbe_chem_comp_rdkit_properties.NumHBA 5 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23 _pdbe_chem_comp_rdkit_properties.NumAtoms 35 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 1 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.286 _pdbe_chem_comp_rdkit_properties.NumRings 3 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 2 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 144.954 _pdbe_chem_comp_rdkit_properties.tpsa 78.590 _pdbe_chem_comp_rdkit_properties.CrippenClogP 1.088 _pdbe_chem_comp_rdkit_properties.CrippenMR 71.074 _pdbe_chem_comp_rdkit_properties.chi0v 10.700 _pdbe_chem_comp_rdkit_properties.chi1v 5.721 _pdbe_chem_comp_rdkit_properties.chi2v 2.669 _pdbe_chem_comp_rdkit_properties.chi3v 2.669 _pdbe_chem_comp_rdkit_properties.chi4v 1.720 _pdbe_chem_comp_rdkit_properties.chi0n 22.700 _pdbe_chem_comp_rdkit_properties.chi1n 11.537 _pdbe_chem_comp_rdkit_properties.chi2n 2.669 _pdbe_chem_comp_rdkit_properties.chi3n 2.669 _pdbe_chem_comp_rdkit_properties.chi4n 1.720 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.710 _pdbe_chem_comp_rdkit_properties.kappa1 6.421 _pdbe_chem_comp_rdkit_properties.kappa2 5.182 _pdbe_chem_comp_rdkit_properties.kappa3 2.579 _pdbe_chem_comp_rdkit_properties.Phi 1.447 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id 7FX UniChem PDBe 7FX 7FX UniChem ZINC ZINC000584905399 7FX UniChem PubChem 124201643 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal 7FX C01 -0.916 -1.041 0.322 ETKDGv3 1 7FX C02 -3.251 -0.547 -0.697 ETKDGv3 2 7FX C03 -1.560 1.291 -0.242 ETKDGv3 3 7FX C04 -4.215 -0.837 0.466 ETKDGv3 4 7FX C05 -1.999 -1.467 -0.697 ETKDGv3 5 7FX C06 -1.463 2.598 -0.435 ETKDGv3 6 7FX C07 -2.771 2.989 -0.986 ETKDGv3 7 7FX N08 -0.536 0.374 0.166 ETKDGv3 8 7FX N09 -3.545 1.956 -1.114 ETKDGv3 9 7FX N13 -2.828 0.848 -0.659 ETKDGv3 10 7FX C14 1.997 0.233 0.225 ETKDGv3 11 7FX C15 2.060 -0.368 -1.133 ETKDGv3 12 7FX C16 3.195 -0.911 -1.587 ETKDGv3 13 7FX C17 4.405 -0.916 -0.743 ETKDGv3 14 7FX C18 4.363 -0.372 0.482 ETKDGv3 15 7FX C19 3.109 0.229 0.996 ETKDGv3 16 7FX O20 3.090 0.771 2.281 ETKDGv3 17 7FX O21 5.578 -1.486 -1.233 ETKDGv3 18 7FX C22 0.722 0.836 0.687 ETKDGv3 19 7FX O23 0.734 1.774 1.530 ETKDGv3 20 7FX F10 -4.579 -2.172 0.467 ETKDGv3 21 7FX F11 -5.359 -0.073 0.317 ETKDGv3 22 7FX F12 -3.633 -0.525 1.681 ETKDGv3 23 7FX H1 -1.281 -1.208 1.356 ETKDGv3 24 7FX H2 -0.030 -1.696 0.182 ETKDGv3 25 7FX H3 -3.802 -0.726 -1.647 ETKDGv3 26 7FX H4 -1.543 -1.433 -1.711 ETKDGv3 27 7FX H5 -2.289 -2.523 -0.510 ETKDGv3 28 7FX H6 -0.598 3.227 -0.273 ETKDGv3 29 7FX H7 -3.064 3.991 -1.270 ETKDGv3 30 7FX H8 1.186 -0.362 -1.774 ETKDGv3 31 7FX H9 3.229 -1.344 -2.578 ETKDGv3 32 7FX H10 5.248 -0.372 1.107 ETKDGv3 33 7FX H11 3.917 0.767 2.866 ETKDGv3 34 7FX H12 6.430 -1.509 -0.685 ETKDGv3 35 #