data_7L4
#
_chem_comp.id 7L4
_chem_comp.name 2-PHENYLQUINOLIN-4-OL
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C15 H11 N O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-11-16
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 221.254
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 7L4
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2XYA
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
7L4 C1 C1 C 0 1 Y N N N N N 6.867 33.010 22.127 -4.809 -0.374 0.004 C1 7L4 1
7L4 C2 C2 C 0 1 Y N N N N N 6.407 31.881 22.788 -3.987 -1.486 0.009 C2 7L4 2
7L4 C3 C3 C 0 1 Y N N N N N 6.898 30.614 22.466 -2.615 -1.334 0.006 C3 7L4 3
7L4 C4 C4 C 0 1 Y N N N N N 7.870 30.479 21.478 -2.059 -0.056 -0.002 C4 7L4 4
7L4 C5 C5 C 0 1 Y N N N N N 8.336 31.602 20.803 -2.892 1.061 -0.008 C5 7L4 5
7L4 C6 C6 C 0 1 Y N N N N N 7.839 32.855 21.135 -4.262 0.897 -0.005 C6 7L4 6
7L4 C7 C7 C 0 1 Y N N N N N 8.406 29.149 21.131 -0.586 0.114 -0.005 C7 7L4 7
7L4 C8 C8 C 0 1 Y N N N N N 7.502 28.086 20.913 -0.047 1.407 -0.014 C8 7L4 8
7L4 C9 C9 C 0 1 Y N N N N N 8.005 26.857 20.572 1.312 1.577 -0.016 C9 7L4 9
7L4 C10 C10 C 0 1 Y N N N N N 9.407 26.695 20.445 2.131 0.423 -0.009 C10 7L4 10
7L4 C11 C11 C 0 1 Y N N N N N 9.959 25.458 20.116 3.529 0.523 -0.010 C11 7L4 11
7L4 C12 C12 C 0 1 Y N N N N N 11.320 25.310 20.000 4.286 -0.610 -0.003 C12 7L4 12
7L4 C13 C13 C 0 1 Y N N N N N 12.160 26.394 20.243 3.688 -1.868 0.005 C13 7L4 13
7L4 C14 C14 C 0 1 Y N N N N N 11.639 27.622 20.552 2.333 -2.001 0.006 C14 7L4 14
7L4 C15 C15 C 0 1 Y N N N N N 10.260 27.803 20.670 1.519 -0.854 -0.001 C15 7L4 15
7L4 N16 N16 N 0 1 Y N N N N N 9.729 28.995 21.001 0.187 -0.957 0.006 N16 7L4 16
7L4 O17 O17 O 0 1 N N N N N N 7.175 25.798 20.382 1.859 2.819 -0.025 O17 7L4 17
7L4 H1 H1 H 0 1 N N N N N N 6.482 33.988 22.374 -5.882 -0.498 0.002 H1 7L4 18
7L4 H2 H2 H 0 1 N N N N N N 5.660 31.983 23.561 -4.419 -2.476 0.016 H2 7L4 19
7L4 H6 H6 H 0 1 N N N N N N 8.211 33.727 20.617 -4.909 1.762 -0.009 H6 7L4 20
7L4 H3 H3 H 0 1 N N N N N N 6.525 29.741 22.982 -1.975 -2.203 0.011 H3 7L4 21
7L4 H5 H5 H 0 1 N N N N N N 9.079 31.500 20.026 -2.467 2.054 -0.014 H5 7L4 22
7L4 H8 H8 H 0 1 N N N N N N 6.437 28.238 21.013 -0.701 2.266 -0.019 H8 7L4 23
7L4 H17 H17 H 0 1 N N N N N N 6.981 25.709 19.456 2.018 3.184 0.856 H17 7L4 24
7L4 H11 H11 H 0 1 N N N N N N 9.312 24.609 19.951 4.004 1.493 -0.017 H11 7L4 25
7L4 H12 H12 H 0 1 N N N N N N 11.738 24.354 19.721 5.363 -0.532 -0.004 H12 7L4 26
7L4 H13 H13 H 0 1 N N N N N N 13.231 26.265 20.187 4.309 -2.752 0.009 H13 7L4 27
7L4 H14 H14 H 0 1 N N N N N N 12.303 28.460 20.706 1.885 -2.984 0.012 H14 7L4 28
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
7L4 C1 C2 SING Y N 1
7L4 C1 C6 DOUB Y N 2
7L4 C2 C3 DOUB Y N 3
7L4 C3 C4 SING Y N 4
7L4 C4 C5 DOUB Y N 5
7L4 C4 C7 SING Y N 6
7L4 C5 C6 SING Y N 7
7L4 C7 C8 SING Y N 8
7L4 C7 N16 DOUB Y N 9
7L4 C8 C9 DOUB Y N 10
7L4 C9 C10 SING Y N 11
7L4 C9 O17 SING N N 12
7L4 C10 C11 SING Y N 13
7L4 C10 C15 DOUB Y N 14
7L4 C11 C12 DOUB Y N 15
7L4 C12 C13 SING Y N 16
7L4 C13 C14 DOUB Y N 17
7L4 C14 C15 SING Y N 18
7L4 C15 N16 SING Y N 19
7L4 C1 H1 SING N N 20
7L4 C2 H2 SING N N 21
7L4 C6 H6 SING N N 22
7L4 C3 H3 SING N N 23
7L4 C5 H5 SING N N 24
7L4 C8 H8 SING N N 25
7L4 O17 H17 SING N N 26
7L4 C11 H11 SING N N 27
7L4 C12 H12 SING N N 28
7L4 C13 H13 SING N N 29
7L4 C14 H14 SING N N 30
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
7L4 SMILES_CANONICAL CACTVS 3.352 Oc1cc(nc2ccccc12)c3ccccc3
7L4 SMILES CACTVS 3.352 Oc1cc(nc2ccccc12)c3ccccc3
7L4 SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 c1ccc(cc1)c2cc(c3ccccc3n2)O
7L4 SMILES "OpenEye OEToolkits" 1.6.1 c1ccc(cc1)c2cc(c3ccccc3n2)O
7L4 InChI InChI 1.03 InChI=1S/C15H11NO/c17-15-10-14(11-6-2-1-3-7-11)16-13-9-5-4-8-12(13)15/h1-10H,(H,16,17)
7L4 InChIKey InChI 1.03 JGABMVVOXLQCKZ-UHFFFAOYSA-N
#
_pdbx_chem_comp_identifier.comp_id 7L4
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 1.6.1
_pdbx_chem_comp_identifier.identifier 2-phenylquinolin-4-ol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
7L4 'Create component' 2010-11-16 EBI
7L4 'Modify aromatic_flag' 2011-06-04 RCSB
7L4 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_synonyms.comp_id 7L4
_pdbe_chem_comp_synonyms.name GNF-Pf-4337
_pdbe_chem_comp_synonyms.provenance ChEMBL
_pdbe_chem_comp_synonyms.type 'Research Code'
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
7L4 C1 C 12.195 -2.625 1
7L4 C2 C 10.896 -3.375 2
7L4 C3 C 9.597 -2.625 3
7L4 C4 C 9.597 -1.125 4
7L4 C5 C 10.896 -0.375 5
7L4 C6 C 12.195 -1.125 6
7L4 C7 C 8.298 -0.375 7
7L4 C8 C 8.298 1.125 8
7L4 C9 C 6.999 1.875 9
7L4 C10 C 5.700 1.125 10
7L4 C11 C 4.359 1.927 11
7L4 C12 C 3.000 1.156 12
7L4 C13 C 3.000 -0.406 13
7L4 C14 C 4.359 -1.177 14
7L4 C15 C 5.700 -0.375 15
7L4 N16 N 6.999 -1.125 16
7L4 O17 O 6.999 3.375 17
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
7L4 C1 C2 DOUBLE NONE 1
7L4 C1 C6 SINGLE NONE 2
7L4 C2 C3 SINGLE NONE 3
7L4 C3 C4 DOUBLE NONE 4
7L4 C4 C5 SINGLE NONE 5
7L4 C4 C7 SINGLE NONE 6
7L4 C5 C6 DOUBLE NONE 7
7L4 C7 C8 DOUBLE NONE 8
7L4 C7 N16 SINGLE NONE 9
7L4 C8 C9 SINGLE NONE 10
7L4 C9 C10 DOUBLE NONE 11
7L4 C9 O17 SINGLE NONE 12
7L4 C10 C11 SINGLE NONE 13
7L4 C10 C15 SINGLE NONE 14
7L4 C11 C12 DOUBLE NONE 15
7L4 C12 C13 SINGLE NONE 16
7L4 C13 C14 DOUBLE NONE 17
7L4 C14 C15 SINGLE NONE 18
7L4 C15 N16 DOUBLE NONE 19
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
7L4 MurckoScaffold S1 scaffold c1ccc(-c2ccc3ccccc3n2)cc1 InChI=1S/C15H11N/c1-2-6-12(7-3-1)15-11-10-13-8-4-5-9-14(13)16-15/h1-11H FSEXLNMNADBYJU-UHFFFAOYSA-N
7L4 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
7L4 pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
7L4 quinoline F3 fragment c1ccc2ncccc2c1 InChI=1S/C9H7N/c1-2-6-9-8(4-1)5-3-7-10-9/h1-7H SMWDFEZZVXVKRB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
7L4 C1 S1 1
7L4 C2 S1 1
7L4 C3 S1 1
7L4 C4 S1 1
7L4 C5 S1 1
7L4 C6 S1 1
7L4 C7 S1 1
7L4 C8 S1 1
7L4 C9 S1 1
7L4 C10 S1 1
7L4 C11 S1 1
7L4 C12 S1 1
7L4 C13 S1 1
7L4 C14 S1 1
7L4 C15 S1 1
7L4 N16 S1 1
7L4 C1 F1 1
7L4 C2 F1 1
7L4 C3 F1 1
7L4 C4 F1 1
7L4 C5 F1 1
7L4 C6 F1 1
7L4 C10 F1 2
7L4 C11 F1 2
7L4 C12 F1 2
7L4 C13 F1 2
7L4 C14 F1 2
7L4 C15 F1 2
7L4 C7 F2 1
7L4 C8 F2 1
7L4 C9 F2 1
7L4 C10 F2 1
7L4 C15 F2 1
7L4 N16 F2 1
7L4 C12 F3 1
7L4 C11 F3 1
7L4 C10 F3 1
7L4 C15 F3 1
7L4 C14 F3 1
7L4 C13 F3 1
7L4 N16 F3 1
7L4 C7 F3 1
7L4 C8 F3 1
7L4 C9 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 7L4
_pdbe_chem_comp_rdkit_properties.exactmw 221.084
_pdbe_chem_comp_rdkit_properties.amw 221.259
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 2
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 17
_pdbe_chem_comp_rdkit_properties.NumAtoms 28
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 114.725
_pdbe_chem_comp_rdkit_properties.tpsa 33.120
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.337
_pdbe_chem_comp_rdkit_properties.CrippenMR 64.706
_pdbe_chem_comp_rdkit_properties.chi0v 8.355
_pdbe_chem_comp_rdkit_properties.chi1v 4.651
_pdbe_chem_comp_rdkit_properties.chi2v 2.087
_pdbe_chem_comp_rdkit_properties.chi3v 2.087
_pdbe_chem_comp_rdkit_properties.chi4v 1.351
_pdbe_chem_comp_rdkit_properties.chi0n 19.355
_pdbe_chem_comp_rdkit_properties.chi1n 10.060
_pdbe_chem_comp_rdkit_properties.chi2n 2.087
_pdbe_chem_comp_rdkit_properties.chi3n 2.087
_pdbe_chem_comp_rdkit_properties.chi4n 1.351
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.350
_pdbe_chem_comp_rdkit_properties.kappa1 3.570
_pdbe_chem_comp_rdkit_properties.kappa2 3.905
_pdbe_chem_comp_rdkit_properties.kappa3 1.738
_pdbe_chem_comp_rdkit_properties.Phi 0.820
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
7L4 UniChem ChEMBL CHEMBL277148
7L4 UniChem PDBe 7L4
7L4 UniChem ZINC ZINC000008578607
7L4 UniChem Mcule MCULE-7831289255
7L4 UniChem NMRShiftDB 20182627
7L4 UniChem ACTor 1144-20-3
7L4 UniChem ACTor 14802-18-7
7L4 UniChem Nikkaji J331.459F
7L4 UniChem BindingDb 48563
7L4 UniChem 'EPA CompTox Dashboard' DTXSID80163869
7L4 UniChem ChemicalBook CB5512289
7L4 UniChem 'Probes And Drugs' PD119628
7L4 UniChem Nikkaji J548.601G
7L4 UniChem eMolecules 1942568
7L4 UniChem eMolecules 2739194
7L4 UniChem SureChEMBL SCHEMBL367268
7L4 UniChem 'PubChem TPHARMA' 14843674
7L4 UniChem 'PubChem TPHARMA' 15220455
7L4 UniChem PubChem 161091
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
7L4 C1 4.828 -0.048 0.188 ETKDGv3 1
7L4 C2 4.237 -1.224 0.426 ETKDGv3 2
7L4 C3 2.764 -1.339 0.377 ETKDGv3 3
7L4 C4 2.003 -0.264 0.081 ETKDGv3 4
7L4 C5 2.674 1.040 -0.171 ETKDGv3 5
7L4 C6 4.008 1.139 -0.122 ETKDGv3 6
7L4 C7 0.520 -0.333 0.041 ETKDGv3 7
7L4 C8 -0.137 -1.455 -0.312 ETKDGv3 8
7L4 C9 -1.615 -1.475 -0.350 ETKDGv3 9
7L4 C10 -2.301 -0.352 -0.037 ETKDGv3 10
7L4 C11 -3.783 -0.249 -0.040 ETKDGv3 11
7L4 C12 -4.382 0.908 0.277 ETKDGv3 12
7L4 C13 -3.605 2.114 0.637 ETKDGv3 13
7L4 C14 -2.268 2.099 0.663 ETKDGv3 14
7L4 C15 -1.537 0.867 0.330 ETKDGv3 15
7L4 N16 -0.237 0.849 0.357 ETKDGv3 16
7L4 O17 -2.235 -2.674 -0.716 ETKDGv3 17
7L4 H1 5.906 0.036 0.226 ETKDGv3 18
7L4 H2 4.837 -2.095 0.659 ETKDGv3 19
7L4 H6 4.490 2.089 -0.312 ETKDGv3 20
7L4 H3 2.320 -2.297 0.612 ETKDGv3 21
7L4 H5 2.087 1.919 -0.406 ETKDGv3 22
7L4 H8 0.396 -2.352 -0.599 ETKDGv3 23
7L4 H17 -3.234 -2.803 -0.779 ETKDGv3 24
7L4 H11 -4.413 -1.088 -0.291 ETKDGv3 25
7L4 H12 -5.463 0.966 0.271 ETKDGv3 26
7L4 H13 -4.133 3.026 0.884 ETKDGv3 27
7L4 H14 -1.725 2.997 0.931 ETKDGv3 28
#