data_7PI
#
_chem_comp.id 7PI
_chem_comp.name 1-((5-phenylthiophen-2-yl)sulfonyl)-1H-pyrazole
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H10 N2 O2 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms IMTVC-212
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-06-02
_chem_comp.pdbx_modified_date 2023-02-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 290.361
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 7PI
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7XXT
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
7PI C1 C1 C 0 1 Y N N N N N 8.516 6.412 9.630 -1.820 -0.330 -0.240 C1 7PI 1
7PI C10 C2 C 0 1 Y N N N N N 9.510 5.047 11.482 -3.731 0.712 0.972 C10 7PI 2
7PI C11 C3 C 0 1 Y N N N N N 3.710 9.647 9.777 3.298 1.554 0.595 C11 7PI 3
7PI C12 C4 C 0 1 Y N N N N N 2.710 9.506 10.767 3.996 2.394 -0.205 C12 7PI 4
7PI C13 C5 C 0 1 Y N N N N N 3.389 9.720 11.987 4.257 1.726 -1.406 C13 7PI 5
7PI C2 C6 C 0 1 Y N N N N N 7.838 6.526 8.405 -1.246 -0.977 -1.274 C2 7PI 6
7PI C3 C7 C 0 1 Y N N N N N 7.072 7.727 8.245 0.104 -1.219 -1.124 C3 7PI 7
7PI C4 C8 C 0 1 Y N N N N N 7.139 8.575 9.363 0.635 -0.777 0.019 C4 7PI 8
7PI C5 C9 C 0 1 Y N N N N N 9.410 5.279 10.120 -3.247 0.046 -0.155 C5 7PI 9
7PI C6 C10 C 0 1 Y N N N N N 10.120 4.495 9.226 -4.117 -0.263 -1.202 C6 7PI 10
7PI C7 C11 C 0 1 Y N N N N N 10.924 3.472 9.705 -5.448 0.091 -1.117 C7 7PI 11
7PI C8 C12 C 0 1 Y N N N N N 11.024 3.242 11.067 -5.920 0.751 0.003 C8 7PI 12
7PI C9 C13 C 0 1 Y N N N N N 10.318 4.030 11.958 -5.063 1.061 1.045 C9 7PI 13
7PI N1 N1 N 0 1 Y N N N N N 4.833 9.923 10.389 3.123 0.397 -0.077 N1 7PI 14
7PI N2 N2 N 0 1 Y N N N N N 4.645 9.961 11.705 3.734 0.530 -1.331 N2 7PI 15
7PI O1 O1 O 0 1 N N N N N N 6.118 10.965 8.178 2.364 -0.869 1.901 O1 7PI 16
7PI O2 O2 O 0 1 N N N N N N 7.297 11.089 10.604 2.837 -2.048 -0.252 O2 7PI 17
7PI S1 S1 S 0 1 Y N N N N N 8.138 7.812 10.487 -0.610 -0.009 0.995 S1 7PI 18
7PI S2 S2 S 0 1 N N N N N N 6.336 10.180 9.614 2.327 -0.943 0.482 S2 7PI 19
7PI H1 H1 H 0 1 N N N N N N 8.955 5.662 12.175 -3.064 0.950 1.788 H1 7PI 20
7PI H2 H2 H 0 1 N N N N N N 3.572 9.545 8.711 2.947 1.770 1.593 H2 7PI 21
7PI H3 H3 H 0 1 N N N N N N 1.663 9.285 10.623 4.299 3.401 0.042 H3 7PI 22
7PI H4 H4 H 0 1 N N N N N N 2.951 9.690 12.974 4.796 2.130 -2.250 H4 7PI 23
7PI H5 H5 H 0 1 N N N N N N 7.890 5.765 7.640 -1.799 -1.283 -2.150 H5 7PI 24
7PI H6 H6 H 0 1 N N N N N N 6.502 7.956 7.357 0.688 -1.730 -1.876 H6 7PI 25
7PI H7 H7 H 0 1 N N N N N N 10.048 4.679 8.164 -3.749 -0.778 -2.077 H7 7PI 26
7PI H8 H8 H 0 1 N N N N N N 11.475 2.852 9.013 -6.122 -0.147 -1.926 H8 7PI 27
7PI H9 H9 H 0 1 N N N N N N 11.655 2.446 11.434 -6.963 1.027 0.065 H9 7PI 28
7PI H10 H10 H 0 1 N N N N N N 10.397 3.852 13.020 -5.440 1.572 1.918 H10 7PI 29
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
7PI O1 S2 DOUB N N 1
7PI C3 C2 SING Y N 2
7PI C3 C4 DOUB Y N 3
7PI C2 C1 DOUB Y N 4
7PI C6 C7 DOUB Y N 5
7PI C6 C5 SING Y N 6
7PI C4 S2 SING N N 7
7PI C4 S1 SING Y N 8
7PI S2 N1 SING N N 9
7PI S2 O2 DOUB N N 10
7PI C1 C5 SING N N 11
7PI C1 S1 SING Y N 12
7PI C7 C8 SING Y N 13
7PI C11 N1 SING Y N 14
7PI C11 C12 DOUB Y N 15
7PI C5 C10 DOUB Y N 16
7PI N1 N2 SING Y N 17
7PI C12 C13 SING Y N 18
7PI C8 C9 DOUB Y N 19
7PI C10 C9 SING Y N 20
7PI N2 C13 DOUB Y N 21
7PI C10 H1 SING N N 22
7PI C11 H2 SING N N 23
7PI C12 H3 SING N N 24
7PI C13 H4 SING N N 25
7PI C2 H5 SING N N 26
7PI C3 H6 SING N N 27
7PI C6 H7 SING N N 28
7PI C7 H8 SING N N 29
7PI C8 H9 SING N N 30
7PI C9 H10 SING N N 31
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
7PI InChI InChI 1.03 InChI=1S/C13H10N2O2S2/c16-19(17,15-10-4-9-14-15)13-8-7-12(18-13)11-5-2-1-3-6-11/h1-10H
7PI InChIKey InChI 1.03 UKYIIJUGJLWBAF-UHFFFAOYSA-N
7PI SMILES_CANONICAL CACTVS 3.385 O=[S](=O)(n1cccn1)c2sc(cc2)c3ccccc3
7PI SMILES CACTVS 3.385 O=[S](=O)(n1cccn1)c2sc(cc2)c3ccccc3
7PI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)c2ccc(s2)S(=O)(=O)n3cccn3
7PI SMILES "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)c2ccc(s2)S(=O)(=O)n3cccn3
#
_pdbx_chem_comp_identifier.comp_id 7PI
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier 1-(5-phenylthiophen-2-yl)sulfonylpyrazole
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
7PI 'Create component' 2022-06-02 PDBJ
7PI 'Modify name' 2022-06-02 PDBJ
7PI 'Initial release' 2023-02-22 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 7PI
_pdbx_chem_comp_synonyms.name IMTVC-212
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 7PI
_pdbe_chem_comp_synonyms.name IMTVC-212
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
7PI C1 C 4.299 -1.272 1
7PI C10 C 3.000 -3.522 2
7PI C11 C 8.312 3.463 3
7PI C12 C 8.776 4.890 4
7PI C13 C 7.562 5.772 5
7PI C2 C 3.086 -0.390 6
7PI C3 C 3.549 1.036 7
7PI C4 C 5.049 1.036 8
7PI C5 C 4.299 -2.772 9
7PI C6 C 5.598 -3.522 10
7PI C7 C 5.598 -5.022 11
7PI C8 C 4.299 -5.772 12
7PI C9 C 3.000 -5.022 13
7PI N1 N 6.812 3.463 14
7PI N2 N 6.349 4.890 15
7PI O1 O 4.717 3.132 16
7PI O2 O 7.144 1.368 17
7PI S1 S 5.513 -0.390 18
7PI S2 S 5.931 2.250 19
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
7PI O1 S2 DOUBLE NONE 1
7PI C3 C2 SINGLE NONE 2
7PI C3 C4 DOUBLE NONE 3
7PI C2 C1 DOUBLE NONE 4
7PI C6 C7 DOUBLE NONE 5
7PI C6 C5 SINGLE NONE 6
7PI C4 S2 SINGLE NONE 7
7PI C4 S1 SINGLE NONE 8
7PI S2 N1 SINGLE NONE 9
7PI S2 O2 DOUBLE NONE 10
7PI C1 C5 SINGLE NONE 11
7PI C1 S1 SINGLE NONE 12
7PI C7 C8 SINGLE NONE 13
7PI C11 N1 SINGLE NONE 14
7PI C11 C12 DOUBLE NONE 15
7PI C5 C10 DOUBLE NONE 16
7PI N1 N2 SINGLE NONE 17
7PI C12 C13 SINGLE NONE 18
7PI C8 C9 DOUBLE NONE 19
7PI C10 C9 SINGLE NONE 20
7PI N2 C13 DOUBLE NONE 21
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
7PI MurckoScaffold S1 scaffold O=S(=O)(c1ccc(-c2ccccc2)s1)n1cccn1 InChI=1S/C13H10N2O2S2/c16-19(17,15-10-4-9-14-15)13-8-7-12(18-13)11-5-2-1-3-6-11/h1-10H UKYIIJUGJLWBAF-UHFFFAOYSA-N
7PI phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
7PI pyrazole F2 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
7PI thiophen F3 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
7PI C1 S1 1
7PI C10 S1 1
7PI C11 S1 1
7PI C12 S1 1
7PI C13 S1 1
7PI C2 S1 1
7PI C3 S1 1
7PI C4 S1 1
7PI C5 S1 1
7PI C6 S1 1
7PI C7 S1 1
7PI C8 S1 1
7PI C9 S1 1
7PI N1 S1 1
7PI N2 S1 1
7PI O1 S1 1
7PI O2 S1 1
7PI S1 S1 1
7PI S2 S1 1
7PI C10 F1 1
7PI C5 F1 1
7PI C6 F1 1
7PI C7 F1 1
7PI C8 F1 1
7PI C9 F1 1
7PI C11 F2 1
7PI C12 F2 1
7PI C13 F2 1
7PI N2 F2 1
7PI N1 F2 1
7PI C1 F3 1
7PI C2 F3 1
7PI C3 F3 1
7PI C4 F3 1
7PI S1 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 7PI
_pdbe_chem_comp_rdkit_properties.exactmw 290.018
_pdbe_chem_comp_rdkit_properties.amw 290.369
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 3
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 19
_pdbe_chem_comp_rdkit_properties.NumAtoms 29
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 128.604
_pdbe_chem_comp_rdkit_properties.tpsa 51.960
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.361
_pdbe_chem_comp_rdkit_properties.CrippenMR 73.814
_pdbe_chem_comp_rdkit_properties.chi0v 10.660
_pdbe_chem_comp_rdkit_properties.chi1v 7.032
_pdbe_chem_comp_rdkit_properties.chi2v 4.889
_pdbe_chem_comp_rdkit_properties.chi3v 4.889
_pdbe_chem_comp_rdkit_properties.chi4v 3.334
_pdbe_chem_comp_rdkit_properties.chi0n 19.027
_pdbe_chem_comp_rdkit_properties.chi1n 9.775
_pdbe_chem_comp_rdkit_properties.chi2n 2.010
_pdbe_chem_comp_rdkit_properties.chi3n 2.010
_pdbe_chem_comp_rdkit_properties.chi4n 1.206
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.920
_pdbe_chem_comp_rdkit_properties.kappa1 5.222
_pdbe_chem_comp_rdkit_properties.kappa2 4.638
_pdbe_chem_comp_rdkit_properties.kappa3 2.198
_pdbe_chem_comp_rdkit_properties.Phi 1.275
#
_pdbe_chem_comp_external_mappings.comp_id 7PI
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id 7PI
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
7PI C1 -1.230 -0.454 0.221 ETKDGv3 1
7PI C10 -3.257 0.193 -1.011 ETKDGv3 2
7PI C11 4.484 0.171 0.619 ETKDGv3 3
7PI C12 5.020 1.366 0.435 ETKDGv3 4
7PI C13 4.732 1.725 -0.957 ETKDGv3 5
7PI C2 -0.467 -0.481 1.322 ETKDGv3 6
7PI C3 0.942 -0.862 1.081 ETKDGv3 7
7PI C4 1.220 -1.118 -0.193 ETKDGv3 8
7PI C5 -2.671 -0.099 0.168 ETKDGv3 9
7PI C6 -3.501 -0.068 1.405 ETKDGv3 10
7PI C7 -4.799 0.256 1.344 ETKDGv3 11
7PI C8 -5.421 0.583 0.048 ETKDGv3 12
7PI C9 -4.690 0.550 -1.071 ETKDGv3 13
7PI N1 3.893 -0.241 -0.601 ETKDGv3 14
7PI N2 4.063 0.782 -1.535 ETKDGv3 15
7PI O1 2.702 -1.909 -2.261 ETKDGv3 16
7PI O2 3.314 -2.766 -0.057 ETKDGv3 17
7PI S1 -0.229 -0.900 -1.193 ETKDGv3 18
7PI S2 2.801 -1.565 -0.801 ETKDGv3 19
7PI H1 -2.694 0.186 -1.935 ETKDGv3 20
7PI H2 4.474 -0.392 1.543 ETKDGv3 21
7PI H3 5.538 1.959 1.177 ETKDGv3 22
7PI H4 5.010 2.649 -1.447 ETKDGv3 23
7PI H5 -0.824 -0.227 2.309 ETKDGv3 24
7PI H6 1.681 -0.920 1.870 ETKDGv3 25
7PI H7 -3.076 -0.323 2.366 ETKDGv3 26
7PI H8 -5.398 0.272 2.246 ETKDGv3 27
7PI H9 -6.471 0.845 0.004 ETKDGv3 28
7PI H10 -5.145 0.788 -2.024 ETKDGv3 29
#