data_7UE
#
_chem_comp.id 7UE
_chem_comp.name "5-pyrrol-1-ylpyridine-3-carboxylic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H8 N2 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-09-01
_chem_comp.pdbx_modified_date 2022-09-02
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 188.183
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 7UE
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7PLK
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
7UE C01 C1 C 0 1 Y N N N N N -0.250 -4.551 -15.404 -0.639 -0.443 -0.001 C01 7UE 1
7UE C02 C2 C 0 1 Y N N N N N -0.957 -5.753 -15.597 0.437 0.437 -0.000 C02 7UE 2
7UE C03 C3 C 0 1 Y N N N N N -0.856 -6.467 -16.817 1.730 -0.099 -0.000 C03 7UE 3
7UE C04 C4 C 0 1 Y N N N N N -0.037 -5.925 -17.801 1.886 -1.487 -0.001 C04 7UE 4
7UE C05 C5 C 0 1 Y N N N N N 0.543 -4.120 -16.461 -0.395 -1.811 0.005 C05 7UE 5
7UE C06 C6 C 0 1 Y N N N N N 0.136 -2.241 -12.604 -4.152 0.106 -0.002 C06 7UE 6
7UE C07 C7 C 0 1 Y N N N N N 0.462 -2.686 -13.868 -3.086 -0.720 -0.002 C07 7UE 7
7UE C08 C8 C 0 1 Y N N N N N -1.121 -4.042 -13.083 -2.316 1.360 0.005 C08 7UE 8
7UE C09 C9 C 0 1 Y N N N N N -0.871 -3.097 -12.113 -3.662 1.428 -0.001 C09 7UE 9
7UE C10 C10 C 0 1 N N N N N N -1.590 -7.756 -17.103 2.910 0.789 -0.000 C10 7UE 10
7UE N01 N1 N 0 1 Y N N N N N 0.663 -4.774 -17.648 0.837 -2.281 -0.001 N01 7UE 11
7UE N02 N2 N 0 1 Y N N N N N -0.308 -3.800 -14.189 -1.954 0.044 -0.001 N02 7UE 12
7UE O01 O1 O 0 1 N N N N N N -1.359 -8.293 -18.237 2.763 1.995 -0.000 O01 7UE 13
7UE O02 O2 O 0 1 N N N N N N -2.384 -8.201 -16.209 4.150 0.262 -0.000 O02 7UE 14
7UE H1 H1 H 0 1 N N N N N N -1.584 -6.136 -14.805 0.280 1.505 -0.001 H1 7UE 15
7UE H2 H2 H 0 1 N N N N N N 0.046 -6.451 -18.741 2.879 -1.912 -0.005 H2 7UE 16
7UE H3 H3 H 0 1 N N N N N N 1.101 -3.205 -16.331 -1.227 -2.499 0.009 H3 7UE 17
7UE H4 H4 H 0 1 N N N N N N 0.570 -1.397 -12.088 -5.190 -0.191 -0.006 H4 7UE 18
7UE H5 H5 H 0 1 N N N N N N 1.204 -2.237 -14.512 -3.121 -1.800 -0.001 H5 7UE 19
7UE H6 H6 H 0 1 N N N N N N -1.837 -4.847 -13.000 -1.640 2.203 0.007 H6 7UE 20
7UE H7 H7 H 0 1 N N N N N N -1.358 -3.025 -11.152 -4.257 2.329 -0.005 H7 7UE 21
7UE H8 H8 H 0 1 N N N N N N -2.787 -9.005 -16.514 4.891 0.883 -0.000 H8 7UE 22
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
7UE O01 C10 DOUB N N 1
7UE C04 N01 DOUB Y N 2
7UE C04 C03 SING Y N 3
7UE N01 C05 SING Y N 4
7UE C10 C03 SING N N 5
7UE C10 O02 SING N N 6
7UE C03 C02 DOUB Y N 7
7UE C05 C01 DOUB Y N 8
7UE C02 C01 SING Y N 9
7UE C01 N02 SING N N 10
7UE N02 C07 SING Y N 11
7UE N02 C08 SING Y N 12
7UE C07 C06 DOUB Y N 13
7UE C08 C09 DOUB Y N 14
7UE C06 C09 SING Y N 15
7UE C02 H1 SING N N 16
7UE C04 H2 SING N N 17
7UE C05 H3 SING N N 18
7UE C06 H4 SING N N 19
7UE C07 H5 SING N N 20
7UE C08 H6 SING N N 21
7UE C09 H7 SING N N 22
7UE O02 H8 SING N N 23
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
7UE InChI InChI 1.03 InChI=1S/C10H8N2O2/c13-10(14)8-5-9(7-11-6-8)12-3-1-2-4-12/h1-7H,(H,13,14)
7UE InChIKey InChI 1.03 MBHJQDUXANKYCO-UHFFFAOYSA-N
7UE SMILES_CANONICAL CACTVS 3.385 OC(=O)c1cncc(c1)n2cccc2
7UE SMILES CACTVS 3.385 OC(=O)c1cncc(c1)n2cccc2
7UE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1ccn(c1)c2cc(cnc2)C(=O)O
7UE SMILES "OpenEye OEToolkits" 2.0.7 c1ccn(c1)c2cc(cnc2)C(=O)O
#
_pdbx_chem_comp_identifier.comp_id 7UE
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "5-pyrrol-1-ylpyridine-3-carboxylic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
7UE 'Create component' 2021-09-01 PDBE
7UE 'Initial release' 2022-09-07 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
7UE C01 C 6.897 0.578 1
7UE C02 C 5.598 -0.172 2
7UE C03 C 5.598 -1.672 3
7UE C04 C 6.897 -2.422 4
7UE C05 C 8.196 -0.172 5
7UE C06 C 7.647 4.387 6
7UE C07 C 8.111 2.960 7
7UE C08 C 5.684 2.960 8
7UE C09 C 6.147 4.387 9
7UE C10 C 4.299 -2.422 10
7UE N01 N 8.196 -1.672 11
7UE N02 N 6.897 2.078 12
7UE O01 O 4.299 -3.922 13
7UE O02 O 3.000 -1.672 14
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
7UE O01 C10 DOUBLE NONE 1
7UE C04 N01 DOUBLE NONE 2
7UE C04 C03 SINGLE NONE 3
7UE N01 C05 SINGLE NONE 4
7UE C10 C03 SINGLE NONE 5
7UE C10 O02 SINGLE NONE 6
7UE C03 C02 DOUBLE NONE 7
7UE C05 C01 DOUBLE NONE 8
7UE C02 C01 SINGLE NONE 9
7UE C01 N02 SINGLE NONE 10
7UE N02 C07 SINGLE NONE 11
7UE N02 C08 SINGLE NONE 12
7UE C07 C06 DOUBLE NONE 13
7UE C08 C09 DOUBLE NONE 14
7UE C06 C09 SINGLE NONE 15
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
7UE MurckoScaffold S1 scaffold c1cncc(-n2cccc2)c1 InChI=1S/C9H8N2/c1-2-7-11(6-1)9-4-3-5-10-8-9/h1-8H SPFWVEKHAJYTGG-UHFFFAOYSA-N
7UE pyridine F1 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
7UE pyrrole F2 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
7UE C01 S1 1
7UE C02 S1 1
7UE C03 S1 1
7UE C04 S1 1
7UE C05 S1 1
7UE C06 S1 1
7UE C07 S1 1
7UE C08 S1 1
7UE C09 S1 1
7UE N01 S1 1
7UE N02 S1 1
7UE C04 F1 1
7UE C03 F1 1
7UE C02 F1 1
7UE C01 F1 1
7UE C05 F1 1
7UE N01 F1 1
7UE C07 F2 1
7UE C06 F2 1
7UE C09 F2 1
7UE C08 F2 1
7UE N02 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 7UE
_pdbe_chem_comp_rdkit_properties.exactmw 188.059
_pdbe_chem_comp_rdkit_properties.amw 188.186
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 2
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 14
_pdbe_chem_comp_rdkit_properties.NumAtoms 22
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 91.774
_pdbe_chem_comp_rdkit_properties.tpsa 55.120
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.326
_pdbe_chem_comp_rdkit_properties.CrippenMR 49.596
_pdbe_chem_comp_rdkit_properties.chi0v 6.711
_pdbe_chem_comp_rdkit_properties.chi1v 3.526
_pdbe_chem_comp_rdkit_properties.chi2v 1.399
_pdbe_chem_comp_rdkit_properties.chi3v 1.399
_pdbe_chem_comp_rdkit_properties.chi4v 0.821
_pdbe_chem_comp_rdkit_properties.chi0n 14.711
_pdbe_chem_comp_rdkit_properties.chi1n 7.435
_pdbe_chem_comp_rdkit_properties.chi2n 1.399
_pdbe_chem_comp_rdkit_properties.chi3n 1.399
_pdbe_chem_comp_rdkit_properties.chi4n 0.821
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.100
_pdbe_chem_comp_rdkit_properties.kappa1 3.237
_pdbe_chem_comp_rdkit_properties.kappa2 3.334
_pdbe_chem_comp_rdkit_properties.kappa3 1.495
_pdbe_chem_comp_rdkit_properties.Phi 0.771
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
7UE UniChem PDBe 7UE
7UE UniChem ZINC ZINC000002456126
7UE UniChem eMolecules 724978
7UE UniChem 'EPA CompTox Dashboard' DTXSID20365986
7UE UniChem SureChEMBL SCHEMBL1423044
7UE UniChem PubChem 2050101
7UE UniChem Mcule MCULE-8866118209
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
7UE C01 0.280 -0.484 -0.016 ETKDGv3 1
7UE C02 -0.948 0.342 0.108 ETKDGv3 2
7UE C03 -2.162 -0.202 -0.097 ETKDGv3 3
7UE C04 -2.240 -1.639 -0.448 ETKDGv3 4
7UE C05 0.147 -1.782 -0.341 ETKDGv3 5
7UE C06 3.182 1.530 0.889 ETKDGv3 6
7UE C07 1.876 1.313 0.891 ETKDGv3 7
7UE C08 2.847 -0.402 -0.209 ETKDGv3 8
7UE C09 3.811 0.421 0.175 ETKDGv3 9
7UE C10 -3.398 0.602 0.017 ETKDGv3 10
7UE N01 -1.156 -2.348 -0.555 ETKDGv3 11
7UE N02 1.579 0.096 0.211 ETKDGv3 12
7UE O01 -3.344 1.826 0.315 ETKDGv3 13
7UE O02 -4.637 0.009 -0.207 ETKDGv3 14
7UE H1 -0.859 1.393 0.350 ETKDGv3 15
7UE H2 -3.198 -2.111 -0.620 ETKDGv3 16
7UE H3 1.010 -2.427 -0.426 ETKDGv3 17
7UE H4 3.683 2.376 1.341 ETKDGv3 18
7UE H5 1.147 1.959 1.362 ETKDGv3 19
7UE H6 3.005 -1.309 -0.778 ETKDGv3 20
7UE H7 4.868 0.291 -0.017 ETKDGv3 21
7UE H8 -5.493 0.547 -0.133 ETKDGv3 22
#