data_7YH
#
_chem_comp.id 7YH
_chem_comp.name
2-[[(2R)-2-(3-bromanyl-5-iodanyl-phenyl)carbonyloxy-3-tetradecanoyloxy-propoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C29 H49 Br I N O8 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2021-11-02
_chem_comp.pdbx_modified_date 2022-02-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 777.483
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 7YH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7VSO
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
7YH O14 O1 O 0 1 N N N N N N 0.208 77.013 15.292 -5.071 -5.379 -0.375 O14 7YH 1
7YH P13 P1 P 0 1 N N N N N N 0.891 75.654 15.426 -5.264 -3.912 -0.402 P13 7YH 2
7YH O15 O2 O 0 1 N N N N N N 2.305 75.697 15.948 -5.687 -3.454 -1.887 O15 7YH 3
7YH O16 O3 O 0 1 N N N N N N 0.046 74.765 16.469 -6.424 -3.504 0.636 O16 7YH 4
7YH C17 C1 C 0 1 N N N N N N -0.329 75.235 17.764 -7.736 -4.069 0.599 C17 7YH 5
7YH C18 C2 C 0 1 N N N N N N -1.634 74.553 18.160 -8.584 -3.464 1.720 C18 7YH 6
7YH N19 N1 N 1 1 N N N N N N -2.450 75.504 18.924 -8.802 -2.037 1.452 N19 7YH 7
7YH C22 C3 C 0 1 N N N N N N -1.560 76.417 19.658 -9.380 -1.872 0.112 C22 7YH 8
7YH C21 C4 C 0 1 N N N N N N -3.269 74.745 19.881 -9.725 -1.486 2.454 C21 7YH 9
7YH C20 C5 C 0 1 N N N N N N -3.313 76.291 18.022 -7.520 -1.324 1.524 C20 7YH 10
7YH O12 O4 O 0 1 N N N N N N 0.890 74.877 14.012 -3.890 -3.183 0.014 O12 7YH 11
7YH C11 C6 C 0 1 N N N N N N -0.063 73.831 13.875 -2.648 -3.424 -0.651 C11 7YH 12
7YH C10 C7 C 0 1 N N R N N N -0.096 73.276 12.468 -1.552 -2.573 -0.008 C10 7YH 13
7YH O9 O5 O 0 1 N N N N N N 1.053 73.788 11.797 -1.839 -1.167 -0.228 O9 7YH 14
7YH C7 C8 C 0 1 N N N N N N 2.012 72.753 11.448 -1.410 -0.301 0.710 C7 7YH 15
7YH O8 O6 O 0 1 N N N N N N 2.004 71.684 12.027 -0.812 -0.709 1.685 O8 7YH 16
7YH C6 C9 C 0 1 Y N N N N N 3.009 73.057 10.385 -1.666 1.146 0.552 C6 7YH 17
7YH C5 C10 C 0 1 Y N N N N N 2.705 74.128 9.566 -1.223 2.046 1.522 C5 7YH 18
7YH C4 C11 C 0 1 Y N N N N N 3.579 74.477 8.560 -1.465 3.397 1.369 C4 7YH 19
7YH BR1 BR1 BR 0 0 N N N N N N 3.162 75.948 7.472 -0.865 4.618 2.682 BR1 7YH 20
7YH C3 C12 C 0 1 Y N N N N N 4.754 73.768 8.365 -2.147 3.858 0.256 C3 7YH 21
7YH C1 C13 C 0 1 Y N N N N N 4.187 72.323 10.212 -2.347 1.619 -0.571 C1 7YH 22
7YH C2 C14 C 0 1 Y N N N N N 5.063 72.689 9.185 -2.589 2.970 -0.710 C2 7YH 23
7YH I1 I1 I 0 1 N N N N N N 6.873 71.690 8.846 -3.619 3.681 -2.390 I1 7YH 24
7YH C23 C15 C 0 1 N N N N N N -1.359 73.890 11.869 -0.201 -2.922 -0.635 C23 7YH 25
7YH O24 O7 O 0 1 N N N N N N -1.752 73.306 10.630 0.854 -2.202 0.055 O24 7YH 26
7YH C25 C16 C 0 1 N N N N N N -2.013 74.209 9.515 2.110 -2.399 -0.377 C25 7YH 27
7YH O26 O8 O 0 1 N N N N N N -1.669 75.384 9.594 2.320 -3.149 -1.301 O26 7YH 28
7YH C27 C17 C 0 1 N N N N N N -2.695 73.701 8.267 3.257 -1.686 0.291 C27 7YH 29
7YH C28 C18 C 0 1 N N N N N N -3.082 72.244 8.472 4.569 -2.083 -0.388 C28 7YH 30
7YH C29 C19 C 0 1 N N N N N N -3.620 71.660 7.172 5.734 -1.359 0.290 C29 7YH 31
7YH C30 C20 C 0 1 N N N N N N -5.157 71.709 7.153 7.046 -1.756 -0.389 C30 7YH 32
7YH C31 C21 C 0 1 N N N N N N -5.682 72.582 5.949 8.211 -1.032 0.289 C31 7YH 33
7YH C32 C22 C 0 1 N N N N N N -7.097 71.922 5.573 9.523 -1.429 -0.389 C32 7YH 34
7YH C33 C23 C 0 1 N N N N N N -7.350 72.033 4.035 10.688 -0.705 0.289 C33 7YH 35
7YH C34 C24 C 0 1 N N N N N N -7.358 70.549 3.389 12.000 -1.102 -0.390 C34 7YH 36
7YH C35 C25 C 0 1 N N N N N N -8.282 70.636 2.120 13.165 -0.378 0.288 C35 7YH 37
7YH C36 C26 C 0 1 N N N N N N -7.479 71.017 0.862 14.477 -0.775 -0.391 C36 7YH 38
7YH C37 C27 C 0 1 N N N N N N -8.366 70.948 -0.395 15.642 -0.051 0.287 C37 7YH 39
7YH C38 C28 C 0 1 N N N N N N -7.892 72.099 -1.364 16.954 -0.449 -0.392 C38 7YH 40
7YH C39 C29 C 0 1 N N N N N N -9.103 72.541 -2.213 18.119 0.276 0.286 C39 7YH 41
7YH H1 H1 H 0 1 N N N N N N 2.554 76.598 16.116 -5.830 -2.502 -1.979 H1 7YH 42
7YH H2 H2 H 0 1 N N N N N N 0.457 74.986 18.492 -8.198 -3.852 -0.364 H2 7YH 43
7YH H3 H3 H 0 1 N N N N N N -0.472 76.325 17.737 -7.671 -5.149 0.735 H3 7YH 44
7YH H4 H4 H 0 1 N N N N N N -2.178 74.242 17.256 -9.545 -3.977 1.765 H4 7YH 45
7YH H5 H5 H 0 1 N N N N N N -1.417 73.670 18.780 -8.065 -3.581 2.671 H5 7YH 46
7YH H6 H6 H 0 1 N N N N N N -0.914 75.836 20.333 -10.332 -2.401 0.059 H6 7YH 47
7YH H7 H7 H 0 1 N N N N N N -0.937 76.975 18.943 -9.542 -0.812 -0.086 H7 7YH 48
7YH H8 H8 H 0 1 N N N N N N -2.164 77.123 20.247 -8.696 -2.280 -0.632 H8 7YH 49
7YH H9 H9 H 0 1 N N N N N N -2.613 74.164 20.546 -9.296 -1.609 3.449 H9 7YH 50
7YH H10 H10 H 0 1 N N N N N N -3.873 75.442 20.480 -9.887 -0.427 2.256 H10 7YH 51
7YH H11 H11 H 0 1 N N N N N N -3.934 74.061 19.333 -10.677 -2.015 2.402 H11 7YH 52
7YH H12 H12 H 0 1 N N N N N N -3.915 76.996 18.613 -6.908 -1.590 0.662 H12 7YH 53
7YH H13 H13 H 0 1 N N N N N N -2.687 76.850 17.311 -7.701 -0.249 1.522 H13 7YH 54
7YH H14 H14 H 0 1 N N N N N N -3.980 75.613 17.469 -6.999 -1.603 2.440 H14 7YH 55
7YH H15 H15 H 0 1 N N N N N N -1.060 74.223 14.126 -2.388 -4.479 -0.563 H15 7YH 56
7YH H16 H16 H 0 1 N N N N N N 0.197 73.020 14.571 -2.743 -3.160 -1.704 H16 7YH 57
7YH H17 H17 H 0 1 N N N N N N -0.143 72.177 12.466 -1.518 -2.773 1.063 H17 7YH 58
7YH H18 H18 H 0 1 N N N N N N 1.792 74.685 9.713 -0.691 1.687 2.391 H18 7YH 59
7YH H19 H19 H 0 1 N N N N N N 5.431 74.055 7.574 -2.334 4.916 0.140 H19 7YH 60
7YH H20 H20 H 0 1 N N N N N N 4.416 71.489 10.859 -2.689 0.928 -1.328 H20 7YH 61
7YH H21 H21 H 0 1 N N N N N N -1.179 74.963 11.705 -0.026 -3.995 -0.548 H21 7YH 62
7YH H22 H22 H 0 1 N N N N N N -2.181 73.762 12.589 -0.205 -2.640 -1.688 H22 7YH 63
7YH H23 H23 H 0 1 N N N N N N -2.008 73.783 7.412 3.115 -0.609 0.204 H23 7YH 64
7YH H24 H24 H 0 1 N N N N N N -3.598 74.298 8.071 3.294 -1.964 1.344 H24 7YH 65
7YH H25 H25 H 0 1 N N N N N N -3.858 72.179 9.249 4.711 -3.160 -0.301 H25 7YH 66
7YH H26 H26 H 0 1 N N N N N N -2.197 71.673 8.789 4.532 -1.805 -1.441 H26 7YH 67
7YH H27 H27 H 0 1 N N N N N N -3.290 70.614 7.081 5.592 -0.282 0.203 H27 7YH 68
7YH H28 H28 H 0 1 N N N N N N -3.229 72.242 6.325 5.771 -1.637 1.343 H28 7YH 69
7YH H29 H29 H 0 1 N N N N N N -5.514 72.147 8.097 7.188 -2.833 -0.302 H29 7YH 70
7YH H30 H30 H 0 1 N N N N N N -5.548 70.686 7.052 7.009 -1.478 -1.442 H30 7YH 71
7YH H31 H31 H 0 1 N N N N N N -4.988 72.529 5.097 8.069 0.045 0.203 H31 7YH 72
7YH H32 H32 H 0 1 N N N N N N -5.809 73.631 6.254 8.248 -1.310 1.343 H32 7YH 73
7YH H33 H33 H 0 1 N N N N N N -7.899 72.448 6.112 9.665 -2.507 -0.303 H33 7YH 74
7YH H34 H34 H 0 1 N N N N N N -7.093 70.862 5.865 9.486 -1.151 -1.443 H34 7YH 75
7YH H35 H35 H 0 1 N N N N N N -6.551 72.631 3.573 10.546 0.372 0.202 H35 7YH 76
7YH H36 H36 H 0 1 N N N N N N -8.321 72.518 3.856 10.725 -0.983 1.342 H36 7YH 77
7YH H37 H37 H 0 1 N N N N N N -7.763 69.821 4.108 12.142 -2.180 -0.303 H37 7YH 78
7YH H38 H38 H 0 1 N N N N N N -6.339 70.252 3.101 11.963 -0.825 -1.443 H38 7YH 79
7YH H39 H39 H 0 1 N N N N N N -9.057 71.397 2.294 13.023 0.699 0.201 H39 7YH 80
7YH H40 H40 H 0 1 N N N N N N -8.759 69.658 1.957 13.202 -0.656 1.341 H40 7YH 81
7YH H41 H41 H 0 1 N N N N N N -6.636 70.320 0.747 14.619 -1.853 -0.304 H41 7YH 82
7YH H42 H42 H 0 1 N N N N N N -7.094 72.041 0.976 14.440 -0.498 -1.444 H42 7YH 83
7YH H43 H43 H 0 1 N N N N N N -9.421 71.097 -0.121 15.500 1.026 0.200 H43 7YH 84
7YH H44 H44 H 0 1 N N N N N N -8.249 69.970 -0.886 15.679 -0.329 1.340 H44 7YH 85
7YH H45 H45 H 0 1 N N N N N N -7.092 71.727 -2.021 17.096 -1.526 -0.305 H45 7YH 86
7YH H46 H46 H 0 1 N N N N N N -7.518 72.950 -0.776 16.917 -0.171 -1.445 H46 7YH 87
7YH H47 H47 H 0 1 N N N N N N -8.797 73.345 -2.898 17.977 1.353 0.199 H47 7YH 88
7YH H48 H48 H 0 1 N N N N N N -9.475 71.685 -2.795 18.156 -0.002 1.340 H48 7YH 89
7YH H49 H49 H 0 1 N N N N N N -9.901 72.908 -1.550 19.054 -0.007 -0.197 H49 7YH 90
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
7YH C39 C38 SING N N 1
7YH C38 C37 SING N N 2
7YH C37 C36 SING N N 3
7YH C36 C35 SING N N 4
7YH C35 C34 SING N N 5
7YH C34 C33 SING N N 6
7YH C33 C32 SING N N 7
7YH C32 C31 SING N N 8
7YH C31 C30 SING N N 9
7YH C30 C29 SING N N 10
7YH C29 C28 SING N N 11
7YH BR1 C4 SING N N 12
7YH C27 C28 SING N N 13
7YH C27 C25 SING N N 14
7YH C3 C4 DOUB Y N 15
7YH C3 C2 SING Y N 16
7YH C4 C5 SING Y N 17
7YH I1 C2 SING N N 18
7YH C2 C1 DOUB Y N 19
7YH C25 O26 DOUB N N 20
7YH C25 O24 SING N N 21
7YH C5 C6 DOUB Y N 22
7YH C1 C6 SING Y N 23
7YH C6 C7 SING N N 24
7YH O24 C23 SING N N 25
7YH C7 O9 SING N N 26
7YH C7 O8 DOUB N N 27
7YH O9 C10 SING N N 28
7YH C23 C10 SING N N 29
7YH C10 C11 SING N N 30
7YH C11 O12 SING N N 31
7YH O12 P13 SING N N 32
7YH O14 P13 DOUB N N 33
7YH P13 O15 SING N N 34
7YH P13 O16 SING N N 35
7YH O16 C17 SING N N 36
7YH C17 C18 SING N N 37
7YH C20 N19 SING N N 38
7YH C18 N19 SING N N 39
7YH N19 C22 SING N N 40
7YH N19 C21 SING N N 41
7YH O15 H1 SING N N 42
7YH C17 H2 SING N N 43
7YH C17 H3 SING N N 44
7YH C18 H4 SING N N 45
7YH C18 H5 SING N N 46
7YH C22 H6 SING N N 47
7YH C22 H7 SING N N 48
7YH C22 H8 SING N N 49
7YH C21 H9 SING N N 50
7YH C21 H10 SING N N 51
7YH C21 H11 SING N N 52
7YH C20 H12 SING N N 53
7YH C20 H13 SING N N 54
7YH C20 H14 SING N N 55
7YH C11 H15 SING N N 56
7YH C11 H16 SING N N 57
7YH C10 H17 SING N N 58
7YH C5 H18 SING N N 59
7YH C3 H19 SING N N 60
7YH C1 H20 SING N N 61
7YH C23 H21 SING N N 62
7YH C23 H22 SING N N 63
7YH C27 H23 SING N N 64
7YH C27 H24 SING N N 65
7YH C28 H25 SING N N 66
7YH C28 H26 SING N N 67
7YH C29 H27 SING N N 68
7YH C29 H28 SING N N 69
7YH C30 H29 SING N N 70
7YH C30 H30 SING N N 71
7YH C31 H31 SING N N 72
7YH C31 H32 SING N N 73
7YH C32 H33 SING N N 74
7YH C32 H34 SING N N 75
7YH C33 H35 SING N N 76
7YH C33 H36 SING N N 77
7YH C34 H37 SING N N 78
7YH C34 H38 SING N N 79
7YH C35 H39 SING N N 80
7YH C35 H40 SING N N 81
7YH C36 H41 SING N N 82
7YH C36 H42 SING N N 83
7YH C37 H43 SING N N 84
7YH C37 H44 SING N N 85
7YH C38 H45 SING N N 86
7YH C38 H46 SING N N 87
7YH C39 H47 SING N N 88
7YH C39 H48 SING N N 89
7YH C39 H49 SING N N 90
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
7YH InChI InChI 1.03 InChI=1S/C29H48BrINO8P/c1-5-6-7-8-9-10-11-12-13-14-15-16-28(33)37-22-27(23-39-41(35,36)38-18-17-32(2,3)4)40-29(34)24-19-25(30)21-26(31)20-24/h19-21,27H,5-18,22-23H2,1-4H3/p+1/t27-/m1/s1
7YH InChIKey InChI 1.03 RDKBFTQTYYTUKD-HHHXNRCGSA-O
7YH SMILES_CANONICAL CACTVS 3.385 CCCCCCCCCCCCCC(=O)OC[C@H](CO[P](O)(=O)OCC[N+](C)(C)C)OC(=O)c1cc(Br)cc(I)c1
7YH SMILES CACTVS 3.385 CCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OCC[N+](C)(C)C)OC(=O)c1cc(Br)cc(I)c1
7YH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OCC[N+](C)(C)C)OC(=O)c1cc(cc(c1)I)Br
7YH SMILES "OpenEye OEToolkits" 2.0.7 CCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCC[N+](C)(C)C)OC(=O)c1cc(cc(c1)I)Br
#
_pdbx_chem_comp_identifier.comp_id 7YH
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
2-[[(2~{R})-2-(3-bromanyl-5-iodanyl-phenyl)carbonyloxy-3-tetradecanoyloxy-propoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
7YH 'Create component' 2021-11-02 PDBJ
7YH 'Initial release' 2022-02-16 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
7YH O14 O 15.240 -1.326 1
7YH P13 P 15.990 -2.625 2
7YH O15 O 16.740 -3.924 3
7YH O16 O 17.290 -1.875 4
7YH C17 C 17.290 -0.375 5
7YH C18 C 18.588 0.375 6
7YH N19 N 18.588 1.875 7
7YH C22 C 20.088 1.875 8
7YH C21 C 17.088 1.875 9
7YH C20 C 18.588 3.375 10
7YH O12 O 14.691 -3.375 11
7YH C11 C 14.691 -4.875 12
7YH C10 C 13.392 -5.625 13
7YH O9 O 13.392 -7.125 14
7YH C7 C 12.093 -7.875 15
7YH O8 O 10.794 -7.125 16
7YH C6 C 12.093 -9.375 17
7YH C5 C 10.794 -10.125 18
7YH C4 C 10.794 -11.625 19
7YH BR1 Br 9.495 -12.375 20
7YH C3 C 12.093 -12.375 21
7YH C1 C 13.392 -10.125 22
7YH C2 C 13.392 -11.625 23
7YH I1 I 14.691 -12.375 24
7YH C23 C 12.093 -4.875 25
7YH O24 O 12.093 -3.375 26
7YH C25 C 10.794 -2.625 27
7YH O26 O 9.495 -3.375 28
7YH C27 C 10.794 -1.125 29
7YH C28 C 9.495 -0.375 30
7YH C29 C 9.495 1.125 31
7YH C30 C 8.196 1.875 32
7YH C31 C 8.196 3.375 33
7YH C32 C 6.897 4.125 34
7YH C33 C 6.897 5.625 35
7YH C34 C 5.598 6.375 36
7YH C35 C 5.598 7.875 37
7YH C36 C 4.299 8.625 38
7YH C37 C 4.299 10.125 39
7YH C38 C 3.000 10.875 40
7YH C39 C 3.000 12.375 41
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
7YH C39 C38 SINGLE NONE 1
7YH C38 C37 SINGLE NONE 2
7YH C37 C36 SINGLE NONE 3
7YH C36 C35 SINGLE NONE 4
7YH C35 C34 SINGLE NONE 5
7YH C34 C33 SINGLE NONE 6
7YH C33 C32 SINGLE NONE 7
7YH C32 C31 SINGLE NONE 8
7YH C31 C30 SINGLE NONE 9
7YH C30 C29 SINGLE NONE 10
7YH C29 C28 SINGLE NONE 11
7YH BR1 C4 SINGLE NONE 12
7YH C27 C28 SINGLE NONE 13
7YH C27 C25 SINGLE NONE 14
7YH C3 C4 DOUBLE NONE 15
7YH C3 C2 SINGLE NONE 16
7YH C4 C5 SINGLE NONE 17
7YH I1 C2 SINGLE NONE 18
7YH C2 C1 DOUBLE NONE 19
7YH C25 O26 DOUBLE NONE 20
7YH C25 O24 SINGLE NONE 21
7YH C5 C6 DOUBLE NONE 22
7YH C1 C6 SINGLE NONE 23
7YH C6 C7 SINGLE NONE 24
7YH O24 C23 SINGLE NONE 25
7YH C7 O9 SINGLE NONE 26
7YH C7 O8 DOUBLE NONE 27
7YH O9 C10 SINGLE NONE 28
7YH C10 C23 SINGLE BEGINDASH 29
7YH C10 C11 SINGLE NONE 30
7YH C11 O12 SINGLE NONE 31
7YH O12 P13 SINGLE NONE 32
7YH O14 P13 DOUBLE NONE 33
7YH P13 O15 SINGLE BEGINDASH 34
7YH P13 O16 SINGLE NONE 35
7YH O16 C17 SINGLE NONE 36
7YH C17 C18 SINGLE NONE 37
7YH C20 N19 SINGLE NONE 38
7YH C18 N19 SINGLE NONE 39
7YH N19 C22 SINGLE NONE 40
7YH N19 C21 SINGLE NONE 41
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
7YH MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
7YH phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
7YH phosphate F2 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
7YH C6 S1 1
7YH C5 S1 1
7YH C4 S1 1
7YH C3 S1 1
7YH C1 S1 1
7YH C2 S1 1
7YH C6 F1 1
7YH C5 F1 1
7YH C4 F1 1
7YH C3 F1 1
7YH C2 F1 1
7YH C1 F1 1
7YH O15 F2 1
7YH P13 F2 1
7YH O14 F2 1
7YH O12 F2 1
7YH O16 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 7YH
_pdbe_chem_comp_rdkit_properties.exactmw 776.142
_pdbe_chem_comp_rdkit_properties.amw 777.492
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 28
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 41
_pdbe_chem_comp_rdkit_properties.NumAtoms 90
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.724
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 336.976
_pdbe_chem_comp_rdkit_properties.tpsa 108.360
_pdbe_chem_comp_rdkit_properties.CrippenClogP 7.608
_pdbe_chem_comp_rdkit_properties.CrippenMR 172.462
_pdbe_chem_comp_rdkit_properties.chi0v 24.054
_pdbe_chem_comp_rdkit_properties.chi1v 12.718
_pdbe_chem_comp_rdkit_properties.chi2v 4.300
_pdbe_chem_comp_rdkit_properties.chi3v 4.300
_pdbe_chem_comp_rdkit_properties.chi4v 3.152
_pdbe_chem_comp_rdkit_properties.chi0n 68.416
_pdbe_chem_comp_rdkit_properties.chi1n 33.794
_pdbe_chem_comp_rdkit_properties.chi2n 2.735
_pdbe_chem_comp_rdkit_properties.chi3n 2.735
_pdbe_chem_comp_rdkit_properties.chi4n 1.460
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.560
_pdbe_chem_comp_rdkit_properties.kappa1 7.864
_pdbe_chem_comp_rdkit_properties.kappa2 21.192
_pdbe_chem_comp_rdkit_properties.kappa3 20.893
_pdbe_chem_comp_rdkit_properties.Phi 4.065
#
_pdbe_chem_comp_external_mappings.comp_id 7YH
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id 7YH
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
7YH O14 0.170 1.561 1.373 ETKDGv3 1
7YH P13 -1.162 0.866 1.200 ETKDGv3 2
7YH O15 -1.699 0.343 2.718 ETKDGv3 3
7YH O16 -2.282 1.974 0.547 ETKDGv3 4
7YH C17 -3.527 1.328 0.418 ETKDGv3 5
7YH C18 -4.561 2.359 -0.075 ETKDGv3 6
7YH N19 -5.958 1.847 -0.229 ETKDGv3 7
7YH C22 -6.509 1.373 1.064 ETKDGv3 8
7YH C21 -6.804 2.967 -0.711 ETKDGv3 9
7YH C20 -6.023 0.754 -1.227 ETKDGv3 10
7YH O12 -0.997 -0.487 0.173 ETKDGv3 11
7YH C11 -0.353 -0.079 -1.012 ETKDGv3 12
7YH C10 -0.345 -1.234 -2.028 ETKDGv3 13
7YH O9 -1.677 -1.688 -2.272 ETKDGv3 14
7YH C7 -2.596 -1.005 -3.079 ETKDGv3 15
7YH O8 -2.237 0.019 -3.723 ETKDGv3 16
7YH C6 -3.987 -1.489 -3.181 ETKDGv3 17
7YH C5 -4.432 -2.476 -2.380 ETKDGv3 18
7YH C4 -5.838 -2.926 -2.459 ETKDGv3 19
7YH BR1 -6.455 -4.310 -1.296 ETKDGv3 20
7YH C3 -6.678 -2.356 -3.331 ETKDGv3 21
7YH C1 -4.925 -0.871 -4.155 ETKDGv3 22
7YH C2 -6.199 -1.279 -4.221 ETKDGv3 23
7YH I1 -7.534 -0.374 -5.579 ETKDGv3 24
7YH C23 0.507 -2.414 -1.550 ETKDGv3 25
7YH O24 -0.073 -3.008 -0.392 ETKDGv3 26
7YH C25 0.495 -4.103 0.262 ETKDGv3 27
7YH O26 1.486 -4.706 -0.235 ETKDGv3 28
7YH C27 -0.079 -4.556 1.568 ETKDGv3 29
7YH C28 0.931 -4.448 2.724 ETKDGv3 30
7YH C29 1.117 -3.018 3.266 ETKDGv3 31
7YH C30 1.945 -2.122 2.333 ETKDGv3 32
7YH C31 2.354 -0.817 3.032 ETKDGv3 33
7YH C32 3.077 0.154 2.085 ETKDGv3 34
7YH C33 4.535 -0.258 1.818 ETKDGv3 35
7YH C34 5.237 0.670 0.813 ETKDGv3 36
7YH C35 5.599 2.036 1.421 ETKDGv3 37
7YH C36 6.297 2.964 0.414 ETKDGv3 38
7YH C37 7.746 2.544 0.125 ETKDGv3 39
7YH C38 8.445 3.571 -0.775 ETKDGv3 40
7YH C39 9.882 3.155 -1.075 ETKDGv3 41
7YH H1 -1.112 -0.421 2.944 ETKDGv3 42
7YH H2 -3.853 0.928 1.402 ETKDGv3 43
7YH H3 -3.442 0.503 -0.322 ETKDGv3 44
7YH H4 -4.195 2.760 -1.048 ETKDGv3 45
7YH H5 -4.550 3.214 0.641 ETKDGv3 46
7YH H6 -6.374 2.139 1.861 ETKDGv3 47
7YH H7 -7.596 1.152 0.980 ETKDGv3 48
7YH H8 -6.023 0.430 1.397 ETKDGv3 49
7YH H9 -6.801 3.812 0.014 ETKDGv3 50
7YH H10 -7.861 2.647 -0.851 ETKDGv3 51
7YH H11 -6.438 3.353 -1.689 ETKDGv3 52
7YH H12 -7.077 0.475 -1.450 ETKDGv3 53
7YH H13 -5.539 1.061 -2.180 ETKDGv3 54
7YH H14 -5.524 -0.166 -0.857 ETKDGv3 55
7YH H15 0.699 0.218 -0.802 ETKDGv3 56
7YH H16 -0.882 0.783 -1.478 ETKDGv3 57
7YH H17 0.103 -0.868 -2.979 ETKDGv3 58
7YH H18 -3.778 -2.941 -1.653 ETKDGv3 59
7YH H19 -7.709 -2.678 -3.387 ETKDGv3 60
7YH H20 -4.585 -0.077 -4.808 ETKDGv3 61
7YH H21 1.538 -2.068 -1.318 ETKDGv3 62
7YH H22 0.564 -3.172 -2.362 ETKDGv3 63
7YH H23 -0.385 -5.619 1.458 ETKDGv3 64
7YH H24 -0.995 -3.971 1.804 ETKDGv3 65
7YH H25 0.545 -5.072 3.560 ETKDGv3 66
7YH H26 1.911 -4.884 2.432 ETKDGv3 67
7YH H27 1.643 -3.097 4.243 ETKDGv3 68
7YH H28 0.126 -2.553 3.459 ETKDGv3 69
7YH H29 2.852 -2.672 2.006 ETKDGv3 70
7YH H30 1.340 -1.863 1.441 ETKDGv3 71
7YH H31 2.999 -1.040 3.910 ETKDGv3 72
7YH H32 1.437 -0.314 3.409 ETKDGv3 73
7YH H33 3.063 1.157 2.560 ETKDGv3 74
7YH H34 2.523 0.227 1.124 ETKDGv3 75
7YH H35 4.553 -1.283 1.392 ETKDGv3 76
7YH H36 5.105 -0.282 2.772 ETKDGv3 77
7YH H37 6.167 0.161 0.483 ETKDGv3 78
7YH H38 4.594 0.810 -0.084 ETKDGv3 79
7YH H39 6.245 1.896 2.315 ETKDGv3 80
7YH H40 4.671 2.546 1.753 ETKDGv3 81
7YH H41 5.716 2.998 -0.534 ETKDGv3 82
7YH H42 6.302 3.991 0.842 ETKDGv3 83
7YH H43 7.758 1.557 -0.384 ETKDGv3 84
7YH H44 8.305 2.458 1.083 ETKDGv3 85
7YH H45 7.890 3.666 -1.734 ETKDGv3 86
7YH H46 8.456 4.563 -0.274 ETKDGv3 87
7YH H47 10.361 3.916 -1.725 ETKDGv3 88
7YH H48 10.465 3.075 -0.132 ETKDGv3 89
7YH H49 9.899 2.177 -1.601 ETKDGv3 90
#