data_980
#
_chem_comp.id 980
_chem_comp.name
(2S)-1-(4-{[2-(2-aminopyrimidin-5-yl)-7-methyl-4-(morpholin-4-yl)thieno[3,2-d]pyrimidin-6-yl]methyl}piperazin-1-yl)-2-hydroxypropan-1-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H30 N8 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-09-02
_chem_comp.pdbx_modified_date 2011-10-28
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 498.601
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 980
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3TL5
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
980 C1 C1 C 0 1 N N N N N N 21.020 65.790 19.215 0.033 3.011 -1.360 C1 980 1
980 C2 C2 C 0 1 Y N N N N N 20.086 64.902 19.967 -0.086 1.509 -1.336 C2 980 2
980 C3 C3 C 0 1 Y N N N N N 18.762 65.266 20.357 0.903 0.719 -1.724 C3 980 3
980 S4 S4 S 0 1 Y N N N N N 18.120 63.921 21.206 0.445 -0.969 -1.573 S4 980 4
980 C5 C5 C 0 1 Y N N N N N 19.482 62.859 21.104 -1.143 -0.532 -0.962 C5 980 5
980 C6 C6 C 0 1 Y N N N N N 20.479 63.545 20.396 -1.250 0.860 -0.895 C6 980 6
980 N7 N7 N 0 1 Y N N N N N 21.695 62.930 20.167 -2.410 1.384 -0.439 N7 980 7
980 C8 C8 C 0 1 Y N N N N N 21.946 61.668 20.582 -3.406 0.608 -0.065 C8 980 8
980 N9 N9 N 0 1 Y N N N N N 20.992 60.999 21.273 -3.331 -0.719 -0.113 N9 980 9
980 C10 C10 C 0 1 Y N N N N N 19.778 61.538 21.542 -2.236 -1.319 -0.557 C10 980 10
980 N11 N11 N 0 1 N N N N N N 18.825 60.748 22.285 -2.162 -2.702 -0.604 N11 980 11
980 C12 C12 C 0 1 N N N N N N 17.577 60.585 21.698 -1.018 -3.195 0.176 C12 980 12
980 C13 C13 C 0 1 N N N N N N 16.588 60.294 22.776 -0.939 -4.719 0.047 C13 980 13
980 O14 O14 O 0 1 N N N N N N 16.934 59.205 23.603 -2.176 -5.293 0.478 O14 980 14
980 C15 C15 C 0 1 N N N N N N 18.213 59.338 24.122 -3.311 -4.835 -0.261 C15 980 15
980 C16 C16 C 0 1 N N N N N N 19.209 59.638 23.053 -3.414 -3.312 -0.136 C16 980 16
980 C17 C17 C 0 1 Y N N N N N 23.299 60.996 20.329 -4.655 1.236 0.427 C17 980 17
980 C18 C18 C 0 1 Y N N N N N 23.828 60.121 21.289 -4.780 2.627 0.495 C18 980 18
980 N19 N19 N 0 1 Y N N N N N 25.022 59.534 21.082 -5.909 3.148 0.939 N19 980 19
980 C20 C20 C 0 1 Y N N N N N 25.711 59.779 19.960 -6.915 2.372 1.317 C20 980 20
980 N21 N21 N 0 1 Y N N N N N 25.224 60.601 19.021 -6.835 1.050 1.267 N21 980 21
980 C22 C22 C 0 1 Y N N N N N 24.037 61.231 19.167 -5.741 0.453 0.829 C22 980 22
980 N23 N23 N 0 1 N N N N N N 26.981 59.148 19.755 -8.080 2.958 1.776 N23 980 23
980 C24 C24 C 0 1 N N N N N N 18.026 66.579 20.113 2.239 1.202 -2.226 C24 980 24
980 N25 N25 N 0 1 N N N N N N 17.514 66.688 18.947 3.166 1.342 -1.095 N25 980 25
980 C26 C26 C 0 1 N N N N N N 16.703 67.782 18.921 4.397 2.031 -1.504 C26 980 26
980 C27 C27 C 0 1 N N N N N N 16.144 68.016 17.543 5.254 2.317 -0.267 C27 980 27
980 N28 N28 N 0 1 N N N N N N 15.673 66.927 16.919 5.461 1.055 0.460 N28 980 28
980 C29 C29 C 0 1 N N N N N N 16.289 65.774 17.169 4.282 0.238 0.785 C29 980 29
980 C30 C30 C 0 1 N N N N N N 16.763 65.609 18.591 3.463 0.034 -0.493 C30 980 30
980 C31 C31 C 0 1 N N N N N N 14.573 66.990 15.982 6.698 0.657 0.817 C31 980 31
980 O32 O32 O 0 1 N N N N N N 14.208 65.955 15.445 7.659 1.343 0.540 O32 980 32
980 C33 C33 C 0 1 N N S N N N 13.875 68.307 15.717 6.887 -0.640 1.561 C33 980 33
980 C35 C35 C 0 1 N N N N N N 12.513 68.145 15.103 6.225 -0.540 2.937 C35 980 34
980 O36 O36 O 0 1 N N N N N N 14.648 69.123 14.916 8.283 -0.897 1.723 O36 980 35
980 H1 H1 H 0 1 N N N N N N 21.610 66.388 19.925 -0.304 3.387 -2.326 H1 980 36
980 H1A H1A H 0 1 N N N N N N 21.697 65.176 18.603 -0.584 3.437 -0.569 H1A 980 37
980 H1B H1B H 0 1 N N N N N N 20.442 66.461 18.562 1.074 3.296 -1.203 H1B 980 38
980 H12 H12 H 0 1 N N N N N N 17.291 61.504 21.166 -0.098 -2.750 -0.205 H12 980 39
980 H12A H12A H 0 0 N N N N N N 17.606 59.750 20.982 -1.148 -2.924 1.224 H12A 980 40
980 H13 H13 H 0 1 N N N N N N 16.508 61.188 23.411 -0.755 -4.987 -0.993 H13 980 41
980 H13A H13A H 0 0 N N N N N N 15.625 60.062 22.297 -0.127 -5.095 0.670 H13A 980 42
980 H15 H15 H 0 1 N N N N N N 18.216 60.162 24.850 -3.196 -5.107 -1.311 H15 980 43
980 H15A H15A H 0 0 N N N N N N 18.495 58.396 24.615 -4.215 -5.296 0.137 H15A 980 44
980 H16 H16 H 0 1 N N N N N N 19.293 58.763 22.392 -3.582 -3.044 0.907 H16 980 45
980 H16A H16A H 0 0 N N N N N N 20.180 59.852 23.524 -4.244 -2.953 -0.744 H16A 980 46
980 H18 H18 H 0 1 N N N N N N 23.277 59.918 22.195 -3.964 3.265 0.189 H18 980 47
980 H22 H22 H 0 1 N N N N N N 23.668 61.900 18.403 -5.683 -0.625 0.791 H22 980 48
980 HN23 HN23 H 0 0 N N N N N N 27.195 58.566 20.539 -8.153 3.924 1.819 HN23 980 49
980 HN2A HN2A H 0 0 N N N N N N 26.946 58.590 18.926 -8.824 2.402 2.056 HN2A 980 50
980 H24 H24 H 0 1 N N N N N N 17.210 66.650 20.848 2.641 0.483 -2.939 H24 980 51
980 H24A H24A H 0 0 N N N N N N 18.747 67.399 20.243 2.115 2.169 -2.715 H24A 980 52
980 H26 H26 H 0 1 N N N N N N 15.869 67.623 19.621 4.955 1.400 -2.196 H26 980 53
980 H26A H26A H 0 0 N N N N N N 17.286 68.664 19.223 4.141 2.970 -1.995 H26A 980 54
980 H27 H27 H 0 1 N N N N N N 15.311 68.728 17.640 6.217 2.724 -0.575 H27 980 55
980 H27A H27A H 0 0 N N N N N N 16.954 68.429 16.923 4.742 3.033 0.376 H27A 980 56
980 H29 H29 H 0 1 N N N N N N 15.580 64.961 16.955 4.602 -0.729 1.173 H29 980 57
980 H29A H29A H 0 0 N N N N N N 17.170 65.715 16.512 3.675 0.752 1.531 H29A 980 58
980 H30 H30 H 0 1 N N N N N N 17.371 64.696 18.671 2.530 -0.475 -0.251 H30 980 59
980 H30A H30A H 0 0 N N N N N N 15.894 65.530 19.261 4.034 -0.569 -1.199 H30A 980 60
980 H33 H33 H 0 1 N N N N N N 13.736 68.775 16.703 6.431 -1.452 0.996 H33 980 61
980 H35 H35 H 0 1 N N N N N N 12.064 69.136 14.938 6.681 0.273 3.502 H35 980 62
980 H35A H35A H 0 0 N N N N N N 12.605 67.619 14.141 5.160 -0.344 2.813 H35A 980 63
980 H35B H35B H 0 0 N N N N N N 11.873 67.561 15.781 6.361 -1.478 3.475 H35B 980 64
980 HO36 HO36 H 0 0 N N N N N N 14.191 69.942 14.763 8.480 -1.718 2.194 HO36 980 65
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
980 C1 C2 SING N N 1
980 C1 H1 SING N N 2
980 C1 H1A SING N N 3
980 C1 H1B SING N N 4
980 C2 C3 DOUB Y N 5
980 C2 C6 SING Y N 6
980 C24 C3 SING N N 7
980 C3 S4 SING Y N 8
980 C5 S4 SING Y N 9
980 C6 C5 DOUB Y N 10
980 C5 C10 SING Y N 11
980 N7 C6 SING Y N 12
980 N7 C8 DOUB Y N 13
980 C17 C8 SING N N 14
980 C8 N9 SING Y N 15
980 N9 C10 DOUB Y N 16
980 C10 N11 SING N N 17
980 C12 N11 SING N N 18
980 N11 C16 SING N N 19
980 C12 C13 SING N N 20
980 C12 H12 SING N N 21
980 C12 H12A SING N N 22
980 C13 O14 SING N N 23
980 C13 H13 SING N N 24
980 C13 H13A SING N N 25
980 O14 C15 SING N N 26
980 C16 C15 SING N N 27
980 C15 H15 SING N N 28
980 C15 H15A SING N N 29
980 C16 H16 SING N N 30
980 C16 H16A SING N N 31
980 C22 C17 DOUB Y N 32
980 C17 C18 SING Y N 33
980 N19 C18 DOUB Y N 34
980 C18 H18 SING N N 35
980 C20 N19 SING Y N 36
980 N21 C20 DOUB Y N 37
980 N23 C20 SING N N 38
980 N21 C22 SING Y N 39
980 C22 H22 SING N N 40
980 N23 HN23 SING N N 41
980 N23 HN2A SING N N 42
980 N25 C24 SING N N 43
980 C24 H24 SING N N 44
980 C24 H24A SING N N 45
980 C30 N25 SING N N 46
980 C26 N25 SING N N 47
980 C27 C26 SING N N 48
980 C26 H26 SING N N 49
980 C26 H26A SING N N 50
980 N28 C27 SING N N 51
980 C27 H27 SING N N 52
980 C27 H27A SING N N 53
980 C31 N28 SING N N 54
980 N28 C29 SING N N 55
980 C29 C30 SING N N 56
980 C29 H29 SING N N 57
980 C29 H29A SING N N 58
980 C30 H30 SING N N 59
980 C30 H30A SING N N 60
980 O32 C31 DOUB N N 61
980 C33 C31 SING N N 62
980 O36 C33 SING N N 63
980 C35 C33 SING N N 64
980 C33 H33 SING N N 65
980 C35 H35 SING N N 66
980 C35 H35A SING N N 67
980 C35 H35B SING N N 68
980 O36 HO36 SING N N 69
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
980 SMILES ACDLabs 12.01 O=C(N1CCN(CC1)Cc3sc2c(nc(nc2c3C)c4cnc(nc4)N)N5CCOCC5)C(O)C
980 InChI InChI 1.03 InChI=1S/C23H30N8O3S/c1-14-17(13-29-3-5-31(6-4-29)22(33)15(2)32)35-19-18(14)27-20(16-11-25-23(24)26-12-16)28-21(19)30-7-9-34-10-8-30/h11-12,15,32H,3-10,13H2,1-2H3,(H2,24,25,26)/t15-/m0/s1
980 InChIKey InChI 1.03 YOVVNQKCSKSHKT-HNNXBMFYSA-N
980 SMILES_CANONICAL CACTVS 3.370 C[C@H](O)C(=O)N1CCN(CC1)Cc2sc3c(nc(nc3c2C)c4cnc(N)nc4)N5CCOCC5
980 SMILES CACTVS 3.370 C[CH](O)C(=O)N1CCN(CC1)Cc2sc3c(nc(nc3c2C)c4cnc(N)nc4)N5CCOCC5
980 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 Cc1c(sc2c1nc(nc2N3CCOCC3)c4cnc(nc4)N)CN5CCN(CC5)C(=O)[C@H](C)O
980 SMILES "OpenEye OEToolkits" 1.7.2 Cc1c(sc2c1nc(nc2N3CCOCC3)c4cnc(nc4)N)CN5CCN(CC5)C(=O)C(C)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
980 "SYSTEMATIC NAME" ACDLabs 12.01 (2S)-1-(4-{[2-(2-aminopyrimidin-5-yl)-7-methyl-4-(morpholin-4-yl)thieno[3,2-d]pyrimidin-6-yl]methyl}piperazin-1-yl)-2-hydroxypropan-1-one
980 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 (2S)-1-[4-[[2-(2-azanylpyrimidin-5-yl)-7-methyl-4-morpholin-4-yl-thieno[3,2-d]pyrimidin-6-yl]methyl]piperazin-1-yl]-2-oxidanyl-propan-1-one
#
_pdbx_chem_comp_audit.comp_id 980
_pdbx_chem_comp_audit.action_type 'Create component'
_pdbx_chem_comp_audit.date 2011-09-02
_pdbx_chem_comp_audit.processing_site RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id 980
_pdbe_chem_comp_drugbank_details.drugbank_id DB12180
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Apitolisib
_pdbe_chem_comp_drugbank_details.description
'Apitolisib has been used in trials studying the treatment of Solid Cancers, Breast Cancer, Prostate Cancer, Renal Cell Carcinoma, and Endometrial Carcinoma, among others.'
_pdbe_chem_comp_drugbank_details.cas_number 1032754-93-0
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
980 GDC-0980 ChEMBL 'Research Code'
980 Apitolisib DrugBank ?
980 Apitolisibum DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id 980
_pdbe_chem_comp_drugbank_classification.drugbank_id DB12180
_pdbe_chem_comp_drugbank_classification.parent Thienopyrimidines
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Thienopyrimidines
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as thienopyrimidines. These are heterocyclic compounds containing a thiophene ring fused to a pyrimidine ring. Thiophene is 5-membered ring consisting of four carbon atoms and one sulfur atom. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions.'
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
980 C1 C 13.485 3.540 1
980 C2 C 13.019 2.115 2
980 C3 C 13.894 0.908 3
980 S4 S 13.019 -0.299 4
980 C5 C 11.600 0.158 5
980 C6 C 11.600 1.658 6
980 N7 N 10.301 2.408 7
980 C8 C 9.002 1.658 8
980 N9 N 9.002 0.158 9
980 C10 C 10.301 -0.592 10
980 N11 N 10.301 -2.092 11
980 C12 C 11.600 -2.842 12
980 C13 C 11.600 -4.342 13
980 O14 O 10.301 -5.092 14
980 C15 C 9.002 -4.342 15
980 C16 C 9.002 -2.842 16
980 C17 C 7.702 2.408 17
980 C18 C 7.702 3.908 18
980 N19 N 6.404 4.658 19
980 C20 C 5.104 3.908 20
980 N21 N 5.104 2.408 21
980 C22 C 6.404 1.658 22
980 N23 N 3.805 4.658 23
980 C24 C 15.394 0.908 24
980 N25 N 16.144 -0.392 25
980 C26 C 17.644 -0.392 26
980 C27 C 18.394 -1.690 27
980 N28 N 17.644 -2.990 28
980 C29 C 16.144 -2.990 29
980 C30 C 15.394 -1.690 30
980 C31 C 18.394 -4.288 31
980 O32 O 17.644 -5.588 32
980 C33 C 19.894 -4.288 33
980 C35 C 20.644 -2.990 34
980 O36 O 20.644 -5.588 35
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
980 C1 C2 SINGLE NONE 1
980 C2 C3 DOUBLE NONE 2
980 C2 C6 SINGLE NONE 3
980 C24 C3 SINGLE NONE 4
980 C3 S4 SINGLE NONE 5
980 C5 S4 SINGLE NONE 6
980 C6 C5 DOUBLE NONE 7
980 C5 C10 SINGLE NONE 8
980 N7 C6 SINGLE NONE 9
980 N7 C8 DOUBLE NONE 10
980 C17 C8 SINGLE NONE 11
980 C8 N9 SINGLE NONE 12
980 N9 C10 DOUBLE NONE 13
980 C10 N11 SINGLE NONE 14
980 C12 N11 SINGLE NONE 15
980 N11 C16 SINGLE NONE 16
980 C12 C13 SINGLE NONE 17
980 C13 O14 SINGLE NONE 18
980 O14 C15 SINGLE NONE 19
980 C16 C15 SINGLE NONE 20
980 C22 C17 SINGLE NONE 21
980 C17 C18 DOUBLE NONE 22
980 N19 C18 SINGLE NONE 23
980 C20 N19 DOUBLE NONE 24
980 N21 C20 SINGLE NONE 25
980 N23 C20 SINGLE NONE 26
980 N21 C22 DOUBLE NONE 27
980 N25 C24 SINGLE NONE 28
980 C30 N25 SINGLE NONE 29
980 C26 N25 SINGLE NONE 30
980 C27 C26 SINGLE NONE 31
980 N28 C27 SINGLE NONE 32
980 C31 N28 SINGLE NONE 33
980 N28 C29 SINGLE NONE 34
980 C29 C30 SINGLE NONE 35
980 O32 C31 DOUBLE NONE 36
980 C33 C31 SINGLE NONE 37
980 O36 C33 SINGLE NONE 38
980 C33 C35 SINGLE BEGINDASH 39
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
980 MurckoScaffold S1 scaffold c1ncc(-c2nc(N3CCOCC3)c3sc(CN4CCNCC4)cc3n2)cn1 InChI=1S/C19H23N7OS/c1-3-25(4-2-20-1)12-15-9-16-17(28-15)19(26-5-7-27-8-6-26)24-18(23-16)14-10-21-13-22-11-14/h9-11,13,20H,1-8,12H2 ZOXVKVUKTDLNRF-UHFFFAOYSA-N
980 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
980 piperazine F2 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
980 pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
980 thiophen F4 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
980 Z390143644 F5 fragment Nc1ncnc2ccsc12 InChI=1S/C6H5N3S/c7-6-5-4(1-2-10-5)8-3-9-6/h1-3H,(H2,7,8,9) QIZMFTNGJPBSBT-UHFFFAOYSA-N
980 Z228585842 F6 fragment CN1CCN(C(=O)CO)CC1 InChI=1S/C7H14N2O2/c1-8-2-4-9(5-3-8)7(11)6-10/h10H,2-6H2,1H3 NXJMRIAKANWEQC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
980 C2 S1 1
980 C3 S1 1
980 S4 S1 1
980 C5 S1 1
980 C6 S1 1
980 N7 S1 1
980 C8 S1 1
980 N9 S1 1
980 C10 S1 1
980 N11 S1 1
980 C12 S1 1
980 C13 S1 1
980 O14 S1 1
980 C15 S1 1
980 C16 S1 1
980 C17 S1 1
980 C18 S1 1
980 N19 S1 1
980 C20 S1 1
980 N21 S1 1
980 C22 S1 1
980 C24 S1 1
980 N25 S1 1
980 C26 S1 1
980 C27 S1 1
980 N28 S1 1
980 C29 S1 1
980 C30 S1 1
980 N28 F1 1
980 C31 F1 1
980 O32 F1 1
980 C33 F1 1
980 N25 F2 1
980 C30 F2 1
980 C29 F2 1
980 N28 F2 1
980 C27 F2 1
980 C26 F2 1
980 C5 F3 1
980 C6 F3 1
980 N7 F3 1
980 C8 F3 1
980 N9 F3 1
980 C10 F3 1
980 C17 F3 2
980 C22 F3 2
980 N21 F3 2
980 C20 F3 2
980 N19 F3 2
980 C18 F3 2
980 C3 F4 1
980 C2 F4 1
980 C6 F4 1
980 C5 F4 1
980 S4 F4 1
980 N11 F5 1
980 C10 F5 1
980 N9 F5 1
980 C8 F5 1
980 N7 F5 1
980 C6 F5 1
980 C2 F5 1
980 C3 F5 1
980 S4 F5 1
980 C5 F5 1
980 C24 F6 1
980 N25 F6 1
980 C30 F6 1
980 C29 F6 1
980 N28 F6 1
980 C27 F6 1
980 C26 F6 1
980 C31 F6 1
980 O32 F6 1
980 C33 F6 1
980 O36 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 980
_pdbe_chem_comp_rdkit_properties.exactmw 498.216
_pdbe_chem_comp_rdkit_properties.amw 498.613
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 11
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 35
_pdbe_chem_comp_rdkit_properties.NumAtoms 65
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.522
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 249.462
_pdbe_chem_comp_rdkit_properties.tpsa 133.830
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.779
_pdbe_chem_comp_rdkit_properties.CrippenMR 128.452
_pdbe_chem_comp_rdkit_properties.chi0v 17.527
_pdbe_chem_comp_rdkit_properties.chi1v 9.816
_pdbe_chem_comp_rdkit_properties.chi2v 5.141
_pdbe_chem_comp_rdkit_properties.chi3v 5.141
_pdbe_chem_comp_rdkit_properties.chi4v 3.592
_pdbe_chem_comp_rdkit_properties.chi0n 46.711
_pdbe_chem_comp_rdkit_properties.chi1n 23.802
_pdbe_chem_comp_rdkit_properties.chi2n 4.061
_pdbe_chem_comp_rdkit_properties.chi3n 4.061
_pdbe_chem_comp_rdkit_properties.chi4n 2.579
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.930
_pdbe_chem_comp_rdkit_properties.kappa1 7.092
_pdbe_chem_comp_rdkit_properties.kappa2 9.975
_pdbe_chem_comp_rdkit_properties.kappa3 4.918
_pdbe_chem_comp_rdkit_properties.Phi 2.021
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
980 UniChem ChEMBL CHEMBL1922094
980 UniChem DrugBank DB12180
980 UniChem PDBe 980
980 UniChem 'Guide to Pharmacology' 7888
980 UniChem ZINC ZINC000059224388
980 UniChem fdasrs 1C854K1MIJ
980 UniChem SureChEMBL SCHEMBL466297
980 UniChem Selleck GDC-0980-RG7422
980 UniChem LINCS LSM-45720
980 UniChem BindingDb 50358204
980 UniChem 'EPA CompTox Dashboard' DTXSID50145738
980 UniChem ChemicalBook CB32554362
980 UniChem ClinicalTrials APITOLISIB
980 UniChem ClinicalTrials GDC-0980
980 UniChem MedChemExpress HY-13246
980 UniChem 'Probes And Drugs' PD010882
980 UniChem Nikkaji J2.971.211E
980 UniChem 'PubChem TPHARMA' 58088126
980 UniChem PubChem 25254071
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
980 C1 -0.361 -2.296 2.485 ETKDGv3 1
980 C2 -0.525 -1.831 1.066 ETKDGv3 2
980 C3 0.311 -2.132 0.051 ETKDGv3 3
980 S4 -0.293 -1.399 -1.466 ETKDGv3 4
980 C5 -1.659 -0.627 -0.637 ETKDGv3 5
980 C6 -1.648 -0.955 0.648 ETKDGv3 6
980 N7 -2.702 -0.515 1.516 ETKDGv3 7
980 C8 -3.687 0.204 1.046 ETKDGv3 8
980 N9 -3.708 0.561 -0.355 ETKDGv3 9
980 C10 -2.764 0.193 -1.178 ETKDGv3 10
980 N11 -2.827 0.591 -2.560 ETKDGv3 11
980 C12 -1.617 0.936 -3.312 ETKDGv3 12
980 C13 -1.932 2.055 -4.310 ETKDGv3 13
980 O14 -3.049 1.716 -5.109 ETKDGv3 14
980 C15 -4.207 1.629 -4.300 ETKDGv3 15
980 C16 -4.087 0.475 -3.300 ETKDGv3 16
980 C17 -4.781 0.657 1.938 ETKDGv3 17
980 C18 -4.802 0.354 3.248 ETKDGv3 18
980 N19 -5.881 0.812 4.078 ETKDGv3 19
980 C20 -6.853 1.523 3.586 ETKDGv3 20
980 N21 -6.858 1.860 2.191 ETKDGv3 21
980 C22 -5.901 1.467 1.403 ETKDGv3 22
980 N23 -7.913 1.966 4.430 ETKDGv3 23
980 C24 1.557 -2.989 0.112 ETKDGv3 24
980 N25 2.814 -2.220 0.249 ETKDGv3 25
980 C26 3.058 -1.309 -0.883 ETKDGv3 26
980 C27 4.476 -0.743 -0.803 ETKDGv3 27
980 N28 4.725 -0.166 0.526 ETKDGv3 28
980 C29 4.311 -0.931 1.710 ETKDGv3 29
980 C30 2.899 -1.492 1.526 ETKDGv3 30
980 C31 5.677 0.904 0.699 ETKDGv3 31
980 O32 5.531 1.708 1.660 ETKDGv3 32
980 C33 6.906 1.019 -0.171 ETKDGv3 33
980 C35 7.952 -0.002 0.279 ETKDGv3 34
980 O36 7.436 2.317 -0.073 ETKDGv3 35
980 H1 -1.318 -2.193 3.039 ETKDGv3 36
980 H1A 0.402 -1.679 3.000 ETKDGv3 37
980 H1B -0.073 -3.365 2.524 ETKDGv3 38
980 H12 -1.260 0.041 -3.865 ETKDGv3 39
980 H12A -0.816 1.286 -2.625 ETKDGv3 40
980 H13 -2.097 3.018 -3.775 ETKDGv3 41
980 H13A -1.053 2.197 -4.973 ETKDGv3 42
980 H15 -4.398 2.588 -3.766 ETKDGv3 43
980 H15A -5.083 1.442 -4.956 ETKDGv3 44
980 H16 -4.099 -0.492 -3.847 ETKDGv3 45
980 H16A -4.962 0.500 -2.615 ETKDGv3 46
980 H18 -4.014 -0.234 3.700 ETKDGv3 47
980 H22 -5.936 1.738 0.356 ETKDGv3 48
980 HN23 -7.919 1.725 5.446 ETKDGv3 49
980 HN2A -8.695 2.535 4.037 ETKDGv3 50
980 H24 1.605 -3.595 -0.818 ETKDGv3 51
980 H24A 1.487 -3.732 0.934 ETKDGv3 52
980 H26 2.337 -0.462 -0.873 ETKDGv3 53
980 H26A 2.949 -1.854 -1.847 ETKDGv3 54
980 H27 5.215 -1.550 -0.999 ETKDGv3 55
980 H27A 4.572 0.035 -1.590 ETKDGv3 56
980 H29 5.024 -1.769 1.866 ETKDGv3 57
980 H29A 4.321 -0.293 2.620 ETKDGv3 58
980 H30 2.691 -2.182 2.373 ETKDGv3 59
980 H30A 2.165 -0.656 1.556 ETKDGv3 60
980 H33 6.642 0.815 -1.232 ETKDGv3 61
980 H35 7.544 -1.033 0.201 ETKDGv3 62
980 H35A 8.253 0.189 1.332 ETKDGv3 63
980 H35B 8.852 0.067 -0.368 ETKDGv3 64
980 HO36 8.071 2.428 -0.828 ETKDGv3 65
#