data_9GU # _chem_comp.id 9GU _chem_comp.name (1H-1,2,3-triazol-1-yl){4-[4-(trifluoromethyl)phenyl]piperazin-1-yl}methanone _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H14 F3 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-04-20 _chem_comp.pdbx_modified_date 2018-11-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 325.289 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9GU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5ZHT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9GU CAG C1 C 0 1 N N N N N N 13.647 -20.244 211.801 -0.541 1.752 0.140 CAG 9GU 1 9GU CAH C2 C 0 1 N N N N N N 15.101 -20.309 211.257 -1.955 2.077 0.631 CAH 9GU 2 9GU NAL N1 N 0 1 N N N N N N 16.010 -19.631 212.165 -2.788 0.874 0.485 NAL 9GU 3 9GU CAM C3 C 0 1 N N N N N N 16.844 -18.618 211.759 -3.977 0.928 -0.147 CAM 9GU 4 9GU OAN O1 O 0 1 N N N N N N 16.955 -18.187 210.606 -4.386 1.985 -0.583 OAN 9GU 5 9GU CAI C4 C 0 1 N N N N N N 15.951 -20.057 213.542 -2.289 -0.390 1.047 CAI 9GU 6 9GU CAJ C5 C 0 1 N N N N N N 14.520 -19.975 214.054 -0.861 -0.618 0.540 CAJ 9GU 7 9GU NAK N2 N 0 1 N N N N N N 13.625 -20.767 213.183 -0.042 0.563 0.844 NAK 9GU 8 9GU CAF C6 C 0 1 Y N N N N N 12.384 -21.033 213.824 1.302 0.331 0.545 CAF 9GU 9 9GU CAA C7 C 0 1 Y N N N N N 12.250 -21.599 215.080 1.965 -0.750 1.112 CAA 9GU 10 9GU CAB C8 C 0 1 Y N N N N N 11.021 -21.818 215.652 3.294 -0.977 0.814 CAB 9GU 11 9GU CAC C9 C 0 1 Y N N N N N 9.877 -21.469 214.981 3.965 -0.130 -0.048 CAC 9GU 12 9GU CAO C10 C 0 1 N N N N N N 8.561 -21.713 215.627 5.416 -0.380 -0.372 CAO 9GU 13 9GU FAQ F1 F 0 1 N N N N N N 8.339 -22.978 215.988 5.506 -1.212 -1.493 FAQ 9GU 14 9GU FAR F2 F 0 1 N N N N N N 7.489 -21.357 214.875 6.050 0.836 -0.642 FAR 9GU 15 9GU FAP F3 F 0 1 N N N N N N 8.407 -21.000 216.768 6.036 -0.999 0.719 FAP 9GU 16 9GU CAD C11 C 0 1 Y N N N N N 9.962 -20.898 213.715 3.309 0.948 -0.614 CAD 9GU 17 9GU CAE C12 C 0 1 Y N N N N N 11.211 -20.679 213.142 1.978 1.178 -0.325 CAE 9GU 18 9GU H1 H1 H 0 1 N N N N N N 13.298 -19.201 211.796 -0.563 1.557 -0.932 H1 9GU 19 9GU H2 H2 H 0 1 N N N N N N 12.988 -20.854 211.166 0.118 2.597 0.342 H2 9GU 20 9GU H3 H3 H 0 1 N N N N N N 15.405 -21.362 211.158 -1.920 2.374 1.679 H3 9GU 21 9GU H4 H4 H 0 1 N N N N N N 15.142 -19.822 210.272 -2.374 2.886 0.032 H4 9GU 22 9GU H6 H6 H 0 1 N N N N N N 16.305 -21.096 213.617 -2.286 -0.331 2.135 H6 9GU 23 9GU H7 H7 H 0 1 N N N N N N 16.594 -19.405 214.152 -2.928 -1.212 0.724 H7 9GU 24 9GU H8 H8 H 0 1 N N N N N N 14.193 -18.925 214.054 -0.435 -1.492 1.032 H8 9GU 25 9GU H9 H9 H 0 1 N N N N N N 14.476 -20.373 215.079 -0.879 -0.781 -0.538 H9 9GU 26 9GU H10 H10 H 0 1 N N N N N N 13.139 -21.877 215.627 1.441 -1.413 1.785 H10 9GU 27 9GU H11 H11 H 0 1 N N N N N N 10.955 -22.266 216.632 3.810 -1.817 1.254 H11 9GU 28 9GU H12 H12 H 0 1 N N N N N N 9.064 -20.626 213.180 3.836 1.608 -1.287 H12 9GU 29 9GU H13 H13 H 0 1 N N N N N N 11.278 -20.232 212.161 1.466 2.019 -0.767 H13 9GU 30 9GU N1 N3 N 0 1 Y N N N N N ? ? ? -4.714 -0.192 -0.295 N1 9GU 31 9GU N2 N4 N 0 1 Y N N N N N ? ? ? -4.450 -1.452 0.262 N2 9GU 32 9GU N3 N5 N 0 1 Y N N N N N ? ? ? -5.384 -2.256 -0.112 N3 9GU 33 9GU C3 C13 C 0 1 Y N N N N N ? ? ? -6.258 -1.609 -0.887 C3 9GU 34 9GU C4 C14 C 0 1 Y N N N N N ? ? ? -5.869 -0.325 -1.012 C4 9GU 35 9GU H5 H5 H 0 1 N N N N N N ? ? ? -7.138 -2.044 -1.338 H5 9GU 36 9GU H14 H14 H 0 1 N N N N N N ? ? ? -6.370 0.449 -1.576 H14 9GU 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9GU OAN CAM DOUB N N 1 9GU CAH CAG SING N N 2 9GU CAH NAL SING N N 3 9GU CAM NAL SING N N 4 9GU CAG NAK SING N N 5 9GU NAL CAI SING N N 6 9GU CAE CAD DOUB Y N 7 9GU CAE CAF SING Y N 8 9GU NAK CAF SING N N 9 9GU NAK CAJ SING N N 10 9GU CAI CAJ SING N N 11 9GU CAD CAC SING Y N 12 9GU CAF CAA DOUB Y N 13 9GU FAR CAO SING N N 14 9GU CAC CAO SING N N 15 9GU CAC CAB DOUB Y N 16 9GU CAA CAB SING Y N 17 9GU CAO FAQ SING N N 18 9GU CAO FAP SING N N 19 9GU CAG H1 SING N N 20 9GU CAG H2 SING N N 21 9GU CAH H3 SING N N 22 9GU CAH H4 SING N N 23 9GU CAI H6 SING N N 24 9GU CAI H7 SING N N 25 9GU CAJ H8 SING N N 26 9GU CAJ H9 SING N N 27 9GU CAA H10 SING N N 28 9GU CAB H11 SING N N 29 9GU CAD H12 SING N N 30 9GU CAE H13 SING N N 31 9GU CAM N1 SING N N 32 9GU N1 N2 SING Y N 33 9GU N2 N3 DOUB Y N 34 9GU N3 C3 SING Y N 35 9GU C3 C4 DOUB Y N 36 9GU C4 N1 SING Y N 37 9GU C3 H5 SING N N 38 9GU C4 H14 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9GU SMILES ACDLabs 12.01 C1N(CCN(C1)C(n2nncc2)=O)c3ccc(C(F)(F)F)cc3 9GU InChI InChI 1.03 InChI=1S/C14H14F3N5O/c15-14(16,17)11-1-3-12(4-2-11)20-7-9-21(10-8-20)13(23)22-6-5-18-19-22/h1-6H,7-10H2 9GU InChIKey InChI 1.03 HHQYTTYRIFYYCO-UHFFFAOYSA-N 9GU SMILES_CANONICAL CACTVS 3.385 FC(F)(F)c1ccc(cc1)N2CCN(CC2)C(=O)n3ccnn3 9GU SMILES CACTVS 3.385 FC(F)(F)c1ccc(cc1)N2CCN(CC2)C(=O)n3ccnn3 9GU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1cc(ccc1C(F)(F)F)N2CCN(CC2)C(=O)n3ccnn3 9GU SMILES "OpenEye OEToolkits" 2.0.6 c1cc(ccc1C(F)(F)F)N2CCN(CC2)C(=O)n3ccnn3 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9GU "SYSTEMATIC NAME" ACDLabs 12.01 (1H-1,2,3-triazol-1-yl){4-[4-(trifluoromethyl)phenyl]piperazin-1-yl}methanone 9GU "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 1,2,3-triazol-1-yl-[4-[4-(trifluoromethyl)phenyl]piperazin-1-yl]methanone # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9GU 'Create component' 2018-04-20 PDBJ 9GU 'Initial release' 2018-11-21 RCSB # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal 9GU CAG C 7.972 -0.973 1 9GU CAH C 7.972 -2.473 2 9GU NAL N 6.673 -3.223 3 9GU CAM C 6.673 -4.723 4 9GU OAN O 7.972 -5.473 5 9GU CAI C 5.374 -2.473 6 9GU CAJ C 5.374 -0.973 7 9GU NAK N 6.673 -0.223 8 9GU CAF C 6.673 1.277 9 9GU CAA C 5.374 2.027 10 9GU CAB C 5.374 3.527 11 9GU CAC C 6.673 4.277 12 9GU CAO C 6.673 5.777 13 9GU FAQ F 6.673 7.277 14 9GU FAR F 8.173 5.777 15 9GU FAP F 5.173 5.777 16 9GU CAD C 7.972 3.527 17 9GU CAE C 7.972 2.027 18 9GU N1 N 5.374 -5.473 19 9GU N2 N 5.217 -6.965 20 9GU N3 N 3.750 -7.277 21 9GU C3 C 3.000 -5.978 22 9GU C4 C 4.004 -4.863 23 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal 9GU OAN CAM DOUBLE NONE 1 9GU CAH CAG SINGLE NONE 2 9GU CAH NAL SINGLE NONE 3 9GU CAM NAL SINGLE NONE 4 9GU CAG NAK SINGLE NONE 5 9GU NAL CAI SINGLE NONE 6 9GU CAE CAD DOUBLE NONE 7 9GU CAE CAF SINGLE NONE 8 9GU NAK CAF SINGLE NONE 9 9GU NAK CAJ SINGLE NONE 10 9GU CAI CAJ SINGLE NONE 11 9GU CAD CAC SINGLE NONE 12 9GU CAF CAA DOUBLE NONE 13 9GU FAR CAO SINGLE NONE 14 9GU CAC CAO SINGLE NONE 15 9GU CAC CAB DOUBLE NONE 16 9GU CAA CAB SINGLE NONE 17 9GU CAO FAQ SINGLE NONE 18 9GU CAO FAP SINGLE NONE 19 9GU CAM N1 SINGLE NONE 20 9GU N1 N2 SINGLE NONE 21 9GU N2 N3 DOUBLE NONE 22 9GU N3 C3 SINGLE NONE 23 9GU C3 C4 DOUBLE NONE 24 9GU C4 N1 SINGLE NONE 25 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys 9GU MurckoScaffold S1 scaffold O=C(N1CCN(c2ccccc2)CC1)n1ccnn1 InChI=1S/C13H15N5O/c19-13(18-7-6-14-15-18)17-10-8-16(9-11-17)12-4-2-1-3-5-12/h1-7H,8-11H2 ILKSIXGCKDCMDG-UHFFFAOYSA-N 9GU phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N 9GU piperazine F2 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N 9GU Z1650868495 F3 fragment Cc1ccc(N2CCN(C(N)=O)CC2)cc1 InChI=1S/C12H17N3O/c1-10-2-4-11(5-3-10)14-6-8-15(9-7-14)12(13)16/h2-5H,6-9H2,1H3,(H2,13,16) RPGNTUSRXJXNEC-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal 9GU CAG S1 1 9GU CAH S1 1 9GU NAL S1 1 9GU CAM S1 1 9GU OAN S1 1 9GU CAI S1 1 9GU CAJ S1 1 9GU NAK S1 1 9GU CAF S1 1 9GU CAA S1 1 9GU CAB S1 1 9GU CAC S1 1 9GU CAD S1 1 9GU CAE S1 1 9GU N1 S1 1 9GU N2 S1 1 9GU N3 S1 1 9GU C3 S1 1 9GU C4 S1 1 9GU CAF F1 1 9GU CAE F1 1 9GU CAD F1 1 9GU CAC F1 1 9GU CAB F1 1 9GU CAA F1 1 9GU NAL F2 1 9GU CAH F2 1 9GU CAG F2 1 9GU NAK F2 1 9GU CAJ F2 1 9GU CAI F2 1 9GU CAO F3 1 9GU CAC F3 1 9GU CAD F3 1 9GU CAE F3 1 9GU CAF F3 1 9GU CAA F3 1 9GU CAB F3 1 9GU NAK F3 1 9GU CAG F3 1 9GU CAH F3 1 9GU NAL F3 1 9GU CAI F3 1 9GU CAJ F3 1 9GU CAM F3 1 9GU OAN F3 1 9GU H1 F3 1 # _pdbe_chem_comp_rdkit_properties.comp_id 9GU _pdbe_chem_comp_rdkit_properties.exactmw 325.115 _pdbe_chem_comp_rdkit_properties.amw 325.294 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 6 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 0 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 1 _pdbe_chem_comp_rdkit_properties.NumHBD 0 _pdbe_chem_comp_rdkit_properties.NumHBA 5 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23 _pdbe_chem_comp_rdkit_properties.NumAtoms 37 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 1 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.357 _pdbe_chem_comp_rdkit_properties.NumRings 3 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 2 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 149.315 _pdbe_chem_comp_rdkit_properties.tpsa 54.260 _pdbe_chem_comp_rdkit_properties.CrippenClogP 1.652 _pdbe_chem_comp_rdkit_properties.CrippenMR 74.956 _pdbe_chem_comp_rdkit_properties.chi0v 10.778 _pdbe_chem_comp_rdkit_properties.chi1v 5.684 _pdbe_chem_comp_rdkit_properties.chi2v 2.379 _pdbe_chem_comp_rdkit_properties.chi3v 2.379 _pdbe_chem_comp_rdkit_properties.chi4v 1.363 _pdbe_chem_comp_rdkit_properties.chi0n 24.778 _pdbe_chem_comp_rdkit_properties.chi1n 12.684 _pdbe_chem_comp_rdkit_properties.chi2n 2.379 _pdbe_chem_comp_rdkit_properties.chi3n 2.379 _pdbe_chem_comp_rdkit_properties.chi4n 1.363 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.580 _pdbe_chem_comp_rdkit_properties.kappa1 5.806 _pdbe_chem_comp_rdkit_properties.kappa2 5.900 _pdbe_chem_comp_rdkit_properties.kappa3 3.275 _pdbe_chem_comp_rdkit_properties.Phi 1.489 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id 9GU UniChem PDBe 9GU 9GU UniChem SureChEMBL SCHEMBL24937848 9GU UniChem PubChem 137348821 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal 9GU CAG 0.077 -0.631 1.353 ETKDGv3 1 9GU CAH 1.267 -1.547 1.044 ETKDGv3 2 9GU NAL 2.211 -0.917 0.110 ETKDGv3 3 9GU CAM 3.453 -1.585 -0.183 ETKDGv3 4 9GU OAN 3.508 -2.844 -0.135 ETKDGv3 5 9GU CAI 1.849 0.332 -0.572 ETKDGv3 6 9GU CAJ 0.381 0.291 -1.003 ETKDGv3 7 9GU NAK -0.500 -0.087 0.114 ETKDGv3 8 9GU CAF -1.916 0.186 0.019 ETKDGv3 9 9GU CAA -2.615 0.607 1.090 ETKDGv3 10 9GU CAB -4.059 0.896 0.980 ETKDGv3 11 9GU CAC -4.694 0.773 -0.199 ETKDGv3 12 9GU CAO -6.177 1.026 -0.298 ETKDGv3 13 9GU FAQ -6.861 -0.085 0.158 ETKDGv3 14 9GU FAR -6.533 2.123 0.468 ETKDGv3 15 9GU FAP -6.546 1.274 -1.609 ETKDGv3 16 9GU CAD -3.932 0.291 -1.378 ETKDGv3 17 9GU CAE -2.625 0.021 -1.277 ETKDGv3 18 9GU H1 -0.682 -1.225 1.908 ETKDGv3 19 9GU H2 0.410 0.208 2.002 ETKDGv3 20 9GU H3 1.790 -1.787 1.995 ETKDGv3 21 9GU H4 0.891 -2.494 0.600 ETKDGv3 22 9GU H6 2.479 0.489 -1.475 ETKDGv3 23 9GU H7 2.003 1.187 0.121 ETKDGv3 24 9GU H8 0.267 -0.447 -1.826 ETKDGv3 25 9GU H9 0.097 1.296 -1.385 ETKDGv3 26 9GU H10 -2.131 0.760 2.046 ETKDGv3 27 9GU H11 -4.595 1.210 1.868 ETKDGv3 28 9GU H12 -4.428 0.147 -2.329 ETKDGv3 29 9GU H13 -2.093 -0.338 -2.148 ETKDGv3 30 9GU N1 4.633 -0.850 -0.529 ETKDGv3 31 9GU N2 5.784 -1.419 -1.079 ETKDGv3 32 9GU N3 6.747 -0.588 -1.054 ETKDGv3 33 9GU C3 6.274 0.614 -0.446 ETKDGv3 34 9GU C4 5.004 0.456 -0.115 ETKDGv3 35 9GU H5 6.877 1.492 -0.256 ETKDGv3 36 9GU H14 4.384 1.165 0.415 ETKDGv3 37 #