data_9KX
#
_chem_comp.id 9KX
_chem_comp.name
(2S)-2-[(1R,3aS,4E,7aR)-7a-methyl-4-[2-[(3R,5R)-4-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3a,5,6,7-hexahydro-1H-inden-1-yl]oct-4,6-diene-3-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H38 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-05-22
_chem_comp.pdbx_modified_date 2019-09-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 410.589
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 9KX
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5ZWI
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9KX O1 O1 O 0 1 N N N N N N 16.110 8.894 19.599 -4.978 -3.474 -0.870 O1 9KX 1
9KX C1 C1 C 0 1 N N R N N N 14.714 8.756 19.434 -5.138 -2.077 -0.617 C1 9KX 2
9KX C2 C2 C 0 1 N N N N N N 14.408 7.534 18.611 -6.393 -1.849 0.194 C2 9KX 3
9KX C3 C3 C 0 1 N N R N N N 14.782 6.194 19.199 -6.704 -0.451 0.678 C3 9KX 4
9KX C4 C4 C 0 1 N N N N N N 14.310 6.030 20.637 -5.503 0.068 1.479 C4 9KX 5
9KX C5 C5 C 0 1 N N N N N N 14.287 7.325 21.451 -4.247 -0.160 0.668 C5 9KX 6
9KX C6 C6 C 0 1 N N N N N N 14.484 7.296 22.741 -3.432 0.850 0.385 C6 9KX 7
9KX C7 C7 C 0 1 N N N N N N 14.733 6.058 23.497 -2.153 0.595 -0.296 C7 9KX 8
9KX C8 C8 C 0 1 N N N N N N 14.622 6.030 24.815 -1.292 1.589 -0.487 C8 9KX 9
9KX C9 C9 C 0 1 N N N N N N 13.803 7.657 17.425 -7.197 -2.845 0.472 C9 9KX 10
9KX C10 C10 C 0 1 N N S N N N 14.901 4.791 25.582 0.026 1.389 -1.174 C10 9KX 11
9KX C11 C11 C 0 1 N N R N N N 13.815 4.516 26.556 1.103 1.844 -0.149 C11 9KX 12
9KX C12 C12 C 0 1 N N N N N N 13.714 5.677 27.508 0.943 3.333 0.051 C12 9KX 13
9KX C13 C13 C 0 1 N N N N N N 13.310 6.941 26.783 -0.394 3.563 0.775 C13 9KX 14
9KX C14 C14 C 0 1 N N N N N N 14.258 7.237 25.624 -1.576 3.012 -0.030 C14 9KX 15
9KX C15 C15 C 0 1 N N N N N N 15.139 3.456 24.870 0.454 -0.058 -1.434 C15 9KX 16
9KX C16 C16 C 0 1 N N N N N N 14.792 2.410 25.876 2.000 0.056 -1.542 C16 9KX 17
9KX C17 C17 C 0 1 N N R N N N 14.280 3.183 27.106 2.400 1.332 -0.757 C17 9KX 18
9KX C18 C18 C 0 1 N N N N N N 12.498 4.362 25.835 0.858 1.137 1.186 C18 9KX 19
9KX C19 C19 C 0 1 N N S N N N 13.242 2.444 27.956 3.403 0.987 0.345 C19 9KX 20
9KX C20 C20 C 0 1 N N N N N N 13.910 1.467 28.919 3.813 2.264 1.081 C20 9KX 21
9KX O2 O2 O 0 1 N N N N N N 12.664 0.789 26.380 4.962 0.645 -1.395 O2 9KX 22
9KX C21 C21 C 0 1 N N N N N N 12.282 1.725 27.095 4.622 0.347 -0.268 C21 9KX 23
9KX C22 C22 C 0 1 N N N N N N 10.855 2.145 27.227 5.367 -0.596 0.466 C22 9KX 24
9KX C23 C23 C 0 1 N N N N N N 9.929 1.211 27.239 6.465 -1.172 -0.086 C23 9KX 25
9KX C24 C24 C 0 1 N N N N N N 8.523 1.582 27.420 7.238 -2.150 0.675 C24 9KX 26
9KX C25 C25 C 0 1 N N N N N N 7.558 0.685 27.209 8.319 -2.717 0.132 C25 9KX 27
9KX C26 C26 C 0 1 N N N N N N 6.139 1.140 27.392 9.116 -3.726 0.917 C26 9KX 28
9KX O O3 O 0 1 N N N N N N 14.199 5.152 18.393 -6.939 0.404 -0.443 O 9KX 29
9KX C C27 C 0 1 N N N N N N 13.998 8.659 20.791 -3.937 -1.558 0.184 C 9KX 30
9KX H1 H1 H 0 1 N N N N N N 16.293 9.667 20.119 -5.703 -3.869 -1.373 H1 9KX 31
9KX H2 H2 H 0 1 N N N N N N 14.318 9.636 18.906 -5.207 -1.540 -1.563 H2 9KX 32
9KX H3 H3 H 0 1 N N N N N N 15.878 6.099 19.182 -7.587 -0.472 1.316 H3 9KX 33
9KX H4 H4 H 0 1 N N N N N N 13.290 5.618 20.619 -5.625 1.134 1.671 H4 9KX 34
9KX H5 H5 H 0 1 N N N N N N 14.983 5.320 21.140 -5.431 -0.471 2.423 H5 9KX 35
9KX H6 H6 H 0 1 N N N N N N 14.463 8.230 23.282 -3.708 1.859 0.655 H6 9KX 36
9KX H7 H7 H 0 1 N N N N N N 15.011 5.159 22.968 -1.914 -0.400 -0.640 H7 9KX 37
9KX H8 H8 H 0 1 N N N N N N 13.533 8.635 17.056 -8.092 -2.671 1.052 H8 9KX 38
9KX H9 H9 H 0 1 N N N N N N 13.585 6.778 16.836 -6.966 -3.840 0.122 H9 9KX 39
9KX H10 H10 H 0 1 N N N N N N 15.809 4.986 26.172 0.080 1.985 -2.085 H10 9KX 40
9KX H11 H11 H 0 1 N N N N N N 12.961 5.447 28.276 1.763 3.715 0.659 H11 9KX 41
9KX H12 H12 H 0 1 N N N N N N 14.691 5.835 27.988 0.933 3.837 -0.915 H12 9KX 42
9KX H13 H13 H 0 1 N N N N N N 13.333 7.783 27.490 -0.362 3.069 1.746 H13 9KX 43
9KX H14 H14 H 0 1 N N N N N N 12.290 6.819 26.390 -0.538 4.633 0.925 H14 9KX 44
9KX H15 H15 H 0 1 N N N N N N 15.182 7.671 26.034 -1.744 3.643 -0.903 H15 9KX 45
9KX H16 H16 H 0 1 N N N N N N 13.774 7.967 24.959 -2.470 3.018 0.594 H16 9KX 46
9KX H17 H17 H 0 1 N N N N N N 14.492 3.370 23.985 0.170 -0.700 -0.599 H17 9KX 47
9KX H18 H18 H 0 1 N N N N N N 16.192 3.364 24.565 0.027 -0.425 -2.367 H18 9KX 48
9KX H19 H19 H 0 1 N N N N N N 14.008 1.745 25.485 2.472 -0.821 -1.096 H19 9KX 49
9KX H20 H20 H 0 1 N N N N N N 15.681 1.816 26.137 2.297 0.150 -2.586 H20 9KX 50
9KX H21 H21 H 0 1 N N N N N N 15.150 3.378 27.751 2.821 2.076 -1.433 H21 9KX 51
9KX H22 H22 H 0 1 N N N N N N 11.701 4.159 26.565 1.021 0.066 1.066 H22 9KX 52
9KX H23 H23 H 0 1 N N N N N N 12.268 5.289 25.290 1.546 1.528 1.936 H23 9KX 53
9KX H24 H24 H 0 1 N N N N N N 12.565 3.526 25.124 -0.169 1.315 1.508 H24 9KX 54
9KX H25 H25 H 0 1 N N N N N N 12.694 3.190 28.550 2.945 0.293 1.050 H25 9KX 55
9KX H26 H26 H 0 1 N N N N N N 14.623 2.010 29.557 2.949 2.675 1.603 H26 9KX 56
9KX H27 H27 H 0 1 N N N N N N 13.144 0.991 29.549 4.597 2.032 1.803 H27 9KX 57
9KX H28 H28 H 0 1 N N N N N N 14.444 0.695 28.346 4.185 2.994 0.362 H28 9KX 58
9KX H29 H29 H 0 1 N N N N N N 10.590 3.189 27.310 5.065 -0.861 1.469 H29 9KX 59
9KX H30 H30 H 0 1 N N N N N N 10.204 0.174 27.116 6.768 -0.907 -1.089 H30 9KX 60
9KX H31 H31 H 0 1 N N N N N N 8.267 2.586 27.725 6.936 -2.415 1.678 H31 9KX 61
9KX H32 H32 H 0 1 N N N N N N 7.789 -0.329 26.918 8.621 -2.452 -0.871 H32 9KX 62
9KX H33 H33 H 0 1 N N N N N N 5.456 0.303 27.186 9.955 -4.076 0.315 H33 9KX 63
9KX H34 H34 H 0 1 N N N N N N 5.995 1.485 28.427 9.493 -3.262 1.829 H34 9KX 64
9KX H35 H35 H 0 1 N N N N N N 5.926 1.966 26.697 8.478 -4.571 1.177 H35 9KX 65
9KX H36 H36 H 0 1 N N N N N N 14.429 4.305 18.755 -7.677 0.126 -1.002 H36 9KX 66
9KX H37 H37 H 0 1 N N N N N N 14.351 9.470 21.445 -3.757 -2.210 1.039 H37 9KX 67
9KX H38 H38 H 0 1 N N N N N N 12.914 8.758 20.636 -3.053 -1.536 -0.455 H38 9KX 68
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9KX C9 C2 DOUB N N 1
9KX O C3 SING N N 2
9KX C2 C3 SING N N 3
9KX C2 C1 SING N N 4
9KX C3 C4 SING N N 5
9KX C1 O1 SING N N 6
9KX C1 C SING N N 7
9KX C4 C5 SING N N 8
9KX C C5 SING N N 9
9KX C5 C6 DOUB N N 10
9KX C6 C7 SING N N 11
9KX C7 C8 DOUB N E 12
9KX C8 C10 SING N N 13
9KX C8 C14 SING N N 14
9KX C15 C10 SING N N 15
9KX C15 C16 SING N N 16
9KX C10 C11 SING N N 17
9KX C14 C13 SING N N 18
9KX C18 C11 SING N N 19
9KX C16 C17 SING N N 20
9KX O2 C21 DOUB N N 21
9KX C11 C17 SING N N 22
9KX C11 C12 SING N N 23
9KX C13 C12 SING N N 24
9KX C21 C22 SING N N 25
9KX C21 C19 SING N N 26
9KX C17 C19 SING N N 27
9KX C25 C26 SING N N 28
9KX C25 C24 DOUB N E 29
9KX C22 C23 DOUB N E 30
9KX C23 C24 SING N N 31
9KX C19 C20 SING N N 32
9KX O1 H1 SING N N 33
9KX C1 H2 SING N N 34
9KX C3 H3 SING N N 35
9KX C4 H4 SING N N 36
9KX C4 H5 SING N N 37
9KX C6 H6 SING N N 38
9KX C7 H7 SING N N 39
9KX C9 H8 SING N N 40
9KX C9 H9 SING N N 41
9KX C10 H10 SING N N 42
9KX C12 H11 SING N N 43
9KX C12 H12 SING N N 44
9KX C13 H13 SING N N 45
9KX C13 H14 SING N N 46
9KX C14 H15 SING N N 47
9KX C14 H16 SING N N 48
9KX C15 H17 SING N N 49
9KX C15 H18 SING N N 50
9KX C16 H19 SING N N 51
9KX C16 H20 SING N N 52
9KX C17 H21 SING N N 53
9KX C18 H22 SING N N 54
9KX C18 H23 SING N N 55
9KX C18 H24 SING N N 56
9KX C19 H25 SING N N 57
9KX C20 H26 SING N N 58
9KX C20 H27 SING N N 59
9KX C20 H28 SING N N 60
9KX C22 H29 SING N N 61
9KX C23 H30 SING N N 62
9KX C24 H31 SING N N 63
9KX C25 H32 SING N N 64
9KX C26 H33 SING N N 65
9KX C26 H34 SING N N 66
9KX C26 H35 SING N N 67
9KX O H36 SING N N 68
9KX C H37 SING N N 69
9KX C H38 SING N N 70
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9KX SMILES ACDLabs 12.01 OC\1CC(/CC(C/1=C)O)=C/C=C3/C2C(C(CC2)C(C)C(=O)\C=C\[C@H]=CC)(CCC3)C
9KX InChI InChI 1.03 InChI=1S/C27H38O3/c1-5-6-7-10-24(28)18(2)22-13-14-23-21(9-8-15-27(22,23)4)12-11-20-16-25(29)19(3)26(30)17-20/h5-7,10-12,18,22-23,25-26,29-30H,3,8-9,13-17H2,1-2,4H3/b6-5+,10-7+,21-12+/t18-,22+,23-,25+,26+,27+/m0/s1
9KX InChIKey InChI 1.03 NXEUFUPQFMVYDT-SVJWBRFGSA-N
9KX SMILES_CANONICAL CACTVS 3.385 C/C=C/C=C/C(=O)[C@@H](C)[C@H]1CC[C@H]2\C(CCC[C@]12C)=C\C=C/3C[C@@H](O)C(=C)[C@H](O)C/3
9KX SMILES CACTVS 3.385 CC=CC=CC(=O)[CH](C)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C(=C)[CH](O)C3
9KX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C/C=C/C=C/C(=O)[C@@H](C)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C3C[C@H](C(=C)[C@@H](C3)O)O)C
9KX SMILES "OpenEye OEToolkits" 2.0.6 CC=CC=CC(=O)C(C)C1CCC2C1(CCCC2=CC=C3CC(C(=C)C(C3)O)O)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9KX "SYSTEMATIC NAME" ACDLabs 12.01 (2S,4E,6E)-2-[(1R,3R,7E,17beta)-1,3-dihydroxy-2-methylidene-9,10-secoestra-5,7-dien-17-yl]octa-4,6-dien-3-one
9KX "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 (2~{S},4~{E},6~{E})-2-[(1~{R},3~{a}~{S},4~{E},7~{a}~{R})-7~{a}-methyl-4-[2-[(3~{R},5~{R})-4-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-1-yl]octa-4,6-dien-3-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9KX 'Create component' 2018-05-22 PDBJ
9KX 'Modify name' 2018-07-05 PDBJ
9KX 'Initial release' 2018-07-18 RCSB
9KX 'Other modification' 2019-09-06 PDBJ
9KX 'Other modification' 2019-09-17 PDBJ
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
9KX O1 O 3.805 -7.062 1
9KX C1 C 5.104 -6.312 2
9KX C2 C 6.404 -7.062 3
9KX C3 C 7.702 -6.312 4
9KX C4 C 7.702 -4.812 5
9KX C5 C 6.404 -4.062 6
9KX C6 C 6.404 -2.562 7
9KX C7 C 7.702 -1.812 8
9KX C8 C 7.702 -0.311 9
9KX C9 C 6.404 -8.562 10
9KX C10 C 9.002 0.439 11
9KX C11 C 9.002 1.938 12
9KX C12 C 7.702 2.688 13
9KX C13 C 6.404 1.938 14
9KX C14 C 6.404 0.439 15
9KX C15 C 10.421 -0.019 16
9KX C16 C 11.296 1.188 17
9KX C17 C 10.421 2.396 18
9KX C18 C 9.002 3.438 19
9KX C19 C 10.887 3.821 20
9KX C20 C 9.885 4.938 21
9KX O2 O 13.356 3.014 22
9KX C21 C 12.355 4.130 23
9KX C22 C 12.821 5.556 24
9KX C23 C 14.288 5.866 25
9KX C24 C 14.754 7.292 26
9KX C25 C 16.222 7.601 27
9KX C26 C 16.688 9.027 28
9KX O O 9.002 -7.062 29
9KX C C 5.104 -4.812 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
9KX C9 C2 DOUBLE NONE 1
9KX C3 O SINGLE BEGINWEDGE 2
9KX C2 C3 SINGLE NONE 3
9KX C2 C1 SINGLE NONE 4
9KX C3 C4 SINGLE NONE 5
9KX C1 O1 SINGLE BEGINDASH 6
9KX C1 C SINGLE NONE 7
9KX C4 C5 SINGLE NONE 8
9KX C C5 SINGLE NONE 9
9KX C5 C6 DOUBLE NONE 10
9KX C6 C7 SINGLE ENDUPRIGHT 11
9KX C7 C8 DOUBLE NONE 12
9KX C8 C10 SINGLE ENDUPRIGHT 13
9KX C8 C14 SINGLE ENDDOWNRIGHT 14
9KX C15 C10 SINGLE NONE 15
9KX C15 C16 SINGLE NONE 16
9KX C10 C11 SINGLE NONE 17
9KX C14 C13 SINGLE NONE 18
9KX C11 C18 SINGLE BEGINWEDGE 19
9KX C17 C16 SINGLE BEGINWEDGE 20
9KX O2 C21 DOUBLE NONE 21
9KX C11 C17 SINGLE NONE 22
9KX C11 C12 SINGLE NONE 23
9KX C13 C12 SINGLE NONE 24
9KX C21 C22 SINGLE ENDDOWNRIGHT 25
9KX C21 C19 SINGLE NONE 26
9KX C17 C19 SINGLE NONE 27
9KX C25 C26 SINGLE ENDDOWNRIGHT 28
9KX C25 C24 DOUBLE NONE 29
9KX C22 C23 DOUBLE NONE 30
9KX C23 C24 SINGLE ENDDOWNRIGHT 31
9KX C19 C20 SINGLE BEGINDASH 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
9KX MurckoScaffold S1 scaffold 'C=C1CCC(=C/C=C2\CCCC3CCC[C@@H]23)CC1' InChI=1S/C18H26/c1-14-8-10-15(11-9-14)12-13-17-5-2-4-16-6-3-7-18(16)17/h12-13,16,18H,1-11H2/b17-13+/t16?,18-/m1/s1 PBIHDOMVYSVIGQ-ZOLFRKJSSA-N
9KX cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
9KX cyclopentane F2 fragment C1CCCC1 InChI=1S/C5H10/c1-2-4-5-3-1/h1-5H2 RGSFGYAAUTVSQA-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
9KX C1 S1 1
9KX C2 S1 1
9KX C3 S1 1
9KX C4 S1 1
9KX C5 S1 1
9KX C6 S1 1
9KX C7 S1 1
9KX C8 S1 1
9KX C9 S1 1
9KX C10 S1 1
9KX C11 S1 1
9KX C12 S1 1
9KX C13 S1 1
9KX C14 S1 1
9KX C15 S1 1
9KX C16 S1 1
9KX C17 S1 1
9KX C S1 1
9KX C1 F1 1
9KX C2 F1 1
9KX C3 F1 1
9KX C4 F1 1
9KX C5 F1 1
9KX C F1 1
9KX C8 F1 2
9KX C10 F1 2
9KX C11 F1 2
9KX C12 F1 2
9KX C13 F1 2
9KX C14 F1 2
9KX C10 F2 1
9KX C15 F2 1
9KX C16 F2 1
9KX C17 F2 1
9KX C11 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 9KX
_pdbe_chem_comp_rdkit_properties.exactmw 410.282
_pdbe_chem_comp_rdkit_properties.amw 410.598
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 68
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.593
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 3
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 235.074
_pdbe_chem_comp_rdkit_properties.tpsa 57.530
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.465
_pdbe_chem_comp_rdkit_properties.CrippenMR 122.851
_pdbe_chem_comp_rdkit_properties.chi0v 14.725
_pdbe_chem_comp_rdkit_properties.chi1v 7.862
_pdbe_chem_comp_rdkit_properties.chi2v 3.772
_pdbe_chem_comp_rdkit_properties.chi3v 3.772
_pdbe_chem_comp_rdkit_properties.chi4v 2.375
_pdbe_chem_comp_rdkit_properties.chi0n 52.725
_pdbe_chem_comp_rdkit_properties.chi1n 26.679
_pdbe_chem_comp_rdkit_properties.chi2n 3.772
_pdbe_chem_comp_rdkit_properties.chi3n 3.772
_pdbe_chem_comp_rdkit_properties.chi4n 2.375
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.710
_pdbe_chem_comp_rdkit_properties.kappa1 4.518
_pdbe_chem_comp_rdkit_properties.kappa2 9.616
_pdbe_chem_comp_rdkit_properties.kappa3 4.626
_pdbe_chem_comp_rdkit_properties.Phi 1.448
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
9KX UniChem ChEMBL CHEMBL4161578
9KX UniChem PDBe 9KX
9KX UniChem PubChem 134693767
9KX UniChem BindingDb 50281166
9KX UniChem 'Probes And Drugs' PD135263
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
9KX O1 -7.065 -1.210 0.332 ETKDGv3 1
9KX C1 -6.764 -1.615 -0.979 ETKDGv3 2
9KX C2 -6.898 -0.436 -1.922 ETKDGv3 3
9KX C3 -5.870 0.680 -1.806 ETKDGv3 4
9KX C4 -4.437 0.114 -1.800 ETKDGv3 5
9KX C5 -4.309 -1.075 -0.867 ETKDGv3 6
9KX C6 -3.276 -1.254 -0.018 ETKDGv3 7
9KX C7 -2.108 -0.349 0.088 ETKDGv3 8
9KX C8 -1.310 -0.307 1.174 ETKDGv3 9
9KX C9 -7.995 -0.317 -2.690 ETKDGv3 10
9KX C10 -0.095 0.593 1.239 ETKDGv3 11
9KX C11 1.070 -0.117 1.951 ETKDGv3 12
9KX C12 0.684 -0.390 3.438 ETKDGv3 13
9KX C13 -0.843 -0.556 3.672 ETKDGv3 14
9KX C14 -1.640 -1.069 2.449 ETKDGv3 15
9KX C15 0.517 1.162 -0.042 ETKDGv3 16
9KX C16 1.979 1.474 0.325 ETKDGv3 17
9KX C17 2.192 0.936 1.761 ETKDGv3 18
9KX C18 1.445 -1.463 1.255 ETKDGv3 19
9KX C19 3.645 0.501 2.163 ETKDGv3 20
9KX C20 4.431 1.685 2.753 ETKDGv3 21
9KX O2 4.572 -1.443 1.109 ETKDGv3 22
9KX C21 4.453 -0.187 1.074 ETKDGv3 23
9KX C22 5.138 0.579 0.006 ETKDGv3 24
9KX C23 5.871 -0.014 -0.941 ETKDGv3 25
9KX C24 6.527 0.776 -1.996 ETKDGv3 26
9KX C25 7.257 0.187 -2.944 ETKDGv3 27
9KX C26 7.921 0.991 -4.014 ETKDGv3 28
9KX O -5.999 1.602 -2.859 ETKDGv3 29
9KX C -5.338 -2.173 -1.024 ETKDGv3 30
9KX H1 -8.050 -1.091 0.375 ETKDGv3 31
9KX H2 -7.451 -2.442 -1.276 ETKDGv3 32
9KX H3 -6.055 1.197 -0.835 ETKDGv3 33
9KX H4 -4.162 -0.215 -2.826 ETKDGv3 34
9KX H5 -3.766 0.948 -1.518 ETKDGv3 35
9KX H6 -3.277 -2.137 0.609 ETKDGv3 36
9KX H7 -1.860 0.267 -0.762 ETKDGv3 37
9KX H8 -8.164 0.553 -3.316 ETKDGv3 38
9KX H9 -8.754 -1.093 -2.701 ETKDGv3 39
9KX H10 -0.405 1.476 1.848 ETKDGv3 40
9KX H11 1.035 0.443 4.086 ETKDGv3 41
9KX H12 1.205 -1.297 3.814 ETKDGv3 42
9KX H13 -1.263 0.433 3.962 ETKDGv3 43
9KX H14 -1.012 -1.239 4.532 ETKDGv3 44
9KX H15 -2.720 -0.952 2.684 ETKDGv3 45
9KX H16 -1.440 -2.152 2.303 ETKDGv3 46
9KX H17 0.487 0.410 -0.861 ETKDGv3 47
9KX H18 -0.020 2.079 -0.367 ETKDGv3 48
9KX H19 2.174 2.568 0.286 ETKDGv3 49
9KX H20 2.626 0.972 -0.420 ETKDGv3 50
9KX H21 1.922 1.786 2.433 ETKDGv3 51
9KX H22 1.822 -1.307 0.223 ETKDGv3 52
9KX H23 2.228 -1.995 1.832 ETKDGv3 53
9KX H24 0.584 -2.155 1.191 ETKDGv3 54
9KX H25 3.548 -0.222 3.003 ETKDGv3 55
9KX H26 4.443 2.546 2.052 ETKDGv3 56
9KX H27 5.476 1.384 2.981 ETKDGv3 57
9KX H28 3.959 2.019 3.702 ETKDGv3 58
9KX H29 5.026 1.656 -0.015 ETKDGv3 59
9KX H30 5.989 -1.092 -0.942 ETKDGv3 60
9KX H31 6.413 1.855 -2.002 ETKDGv3 61
9KX H32 7.379 -0.890 -2.951 ETKDGv3 62
9KX H33 7.158 1.548 -4.599 ETKDGv3 63
9KX H34 8.636 1.709 -3.561 ETKDGv3 64
9KX H35 8.476 0.317 -4.700 ETKDGv3 65
9KX H36 -5.533 2.431 -2.575 ETKDGv3 66
9KX H37 -5.172 -2.668 -2.005 ETKDGv3 67
9KX H38 -5.234 -2.955 -0.239 ETKDGv3 68
#