data_9U2
#
_chem_comp.id 9U2
_chem_comp.name 5-propan-2-yl-1,3-thiazole-4-carbaldehyde
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C7 H9 N O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-07-12
_chem_comp.pdbx_modified_date 2017-12-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 155.217
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 9U2
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5ODM
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9U2 O81 O1 O 0 1 N N N N N N 15.659 25.018 38.614 -2.856 1.545 -0.001 O81 9U2 1
9U2 C81 C1 C 0 1 N N N N N N 16.267 24.624 37.630 -1.645 1.474 -0.001 C81 9U2 2
9U2 C82 C2 C 0 1 Y N N N N N 15.710 23.669 36.609 -0.988 0.165 -0.001 C82 9U2 3
9U2 C84 C3 C 0 1 Y N N N N N 14.425 23.121 36.607 0.370 0.021 -0.001 C84 9U2 4
9U2 C85 C4 C 0 1 N N N N N N 13.260 23.365 37.561 1.370 1.148 0.001 C85 9U2 5
9U2 S81 S1 S 0 1 Y N N N N N 14.159 22.100 35.213 0.750 -1.646 -0.001 S81 9U2 6
9U2 C83 C5 C 0 1 Y N N N N N 15.789 22.454 34.714 -0.960 -2.059 -0.002 C83 9U2 7
9U2 N81 N1 N 0 1 Y N N N N N 16.466 23.256 35.515 -1.668 -0.984 0.004 N81 9U2 8
9U2 CM8 C6 C 0 1 N N N N N N 12.669 24.790 37.474 2.248 1.049 1.250 CM8 9U2 9
9U2 CM9 C7 C 0 1 N N N N N N 13.466 22.898 39.024 2.249 1.051 -1.248 CM9 9U2 10
9U2 H1 H1 H 0 1 N N N N N N 17.274 24.986 37.483 -1.051 2.376 -0.004 H1 9U2 11
9U2 H85 H2 H 0 1 N N N N N N 12.456 22.716 37.182 0.843 2.102 0.001 H85 9U2 12
9U2 H83 H3 H 0 1 N N N N N N 16.217 22.045 33.811 -1.357 -3.064 -0.002 H83 9U2 13
9U2 H882 H4 H 0 0 N N N N N N 11.838 24.887 38.188 1.622 1.118 2.140 H882 9U2 14
9U2 H883 H5 H 0 0 N N N N N N 13.449 25.526 37.717 2.775 0.095 1.249 H883 9U2 15
9U2 H881 H6 H 0 0 N N N N N N 12.299 24.972 36.454 2.972 1.864 1.251 H881 9U2 16
9U2 H992 H7 H 0 0 N N N N N N 12.565 23.126 39.612 1.623 1.121 -2.139 H992 9U2 17
9U2 H993 H8 H 0 0 N N N N N N 13.650 21.814 39.040 2.973 1.866 -1.248 H993 9U2 18
9U2 H991 H9 H 0 0 N N N N N N 14.330 23.423 39.458 2.776 0.097 -1.249 H991 9U2 19
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9U2 C83 S81 SING Y N 1
9U2 C83 N81 DOUB Y N 2
9U2 S81 C84 SING Y N 3
9U2 N81 C82 SING Y N 4
9U2 C84 C82 DOUB Y N 5
9U2 C84 C85 SING N N 6
9U2 C82 C81 SING N N 7
9U2 CM8 C85 SING N N 8
9U2 C85 CM9 SING N N 9
9U2 C81 O81 DOUB N N 10
9U2 C81 H1 SING N N 11
9U2 C85 H85 SING N N 12
9U2 C83 H83 SING N N 13
9U2 CM8 H882 SING N N 14
9U2 CM8 H883 SING N N 15
9U2 CM8 H881 SING N N 16
9U2 CM9 H992 SING N N 17
9U2 CM9 H993 SING N N 18
9U2 CM9 H991 SING N N 19
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9U2 InChI InChI 1.03 InChI=1S/C7H9NOS/c1-5(2)7-6(3-9)8-4-10-7/h3-5H,1-2H3
9U2 InChIKey InChI 1.03 ZNCIEQFZRKIVOL-UHFFFAOYSA-N
9U2 SMILES_CANONICAL CACTVS 3.385 CC(C)c1scnc1C=O
9U2 SMILES CACTVS 3.385 CC(C)c1scnc1C=O
9U2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC(C)c1c(ncs1)C=O
9U2 SMILES "OpenEye OEToolkits" 2.0.6 CC(C)c1c(ncs1)C=O
#
_pdbx_chem_comp_identifier.comp_id 9U2
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier 5-propan-2-yl-1,3-thiazole-4-carbaldehyde
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9U2 'Create component' 2017-07-12 RCSB
9U2 'Initial release' 2017-12-06 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
9U2 O81 O 3.000 -1.393 1
9U2 C81 C 4.115 -0.389 2
9U2 C82 C 5.541 -0.853 3
9U2 C84 C 6.755 0.029 4
9U2 C85 C 6.755 1.529 5
9U2 S81 S 7.968 -0.853 6
9U2 C83 C 7.505 -2.279 7
9U2 N81 N 6.005 -2.279 8
9U2 CM8 C 8.054 2.279 9
9U2 CM9 C 5.456 2.279 10
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
9U2 C83 S81 SINGLE NONE 1
9U2 C83 N81 DOUBLE NONE 2
9U2 S81 C84 SINGLE NONE 3
9U2 N81 C82 SINGLE NONE 4
9U2 C84 C82 DOUBLE NONE 5
9U2 C84 C85 SINGLE NONE 6
9U2 C82 C81 SINGLE NONE 7
9U2 CM8 C85 SINGLE NONE 8
9U2 C85 CM9 SINGLE NONE 9
9U2 C81 O81 DOUBLE NONE 10
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
9U2 MurckoScaffold S1 scaffold c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
9U2 thiazole F1 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
9U2 C82 S1 1
9U2 C84 S1 1
9U2 S81 S1 1
9U2 C83 S1 1
9U2 N81 S1 1
9U2 C84 F1 1
9U2 C82 F1 1
9U2 N81 F1 1
9U2 C83 F1 1
9U2 S81 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 9U2
_pdbe_chem_comp_rdkit_properties.exactmw 155.040
_pdbe_chem_comp_rdkit_properties.amw 155.222
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 10
_pdbe_chem_comp_rdkit_properties.NumAtoms 19
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.429
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 76.557
_pdbe_chem_comp_rdkit_properties.tpsa 29.960
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.970
_pdbe_chem_comp_rdkit_properties.CrippenMR 41.059
_pdbe_chem_comp_rdkit_properties.chi0v 5.580
_pdbe_chem_comp_rdkit_properties.chi1v 3.126
_pdbe_chem_comp_rdkit_properties.chi2v 1.628
_pdbe_chem_comp_rdkit_properties.chi3v 1.628
_pdbe_chem_comp_rdkit_properties.chi4v 0.966
_pdbe_chem_comp_rdkit_properties.chi0n 13.764
_pdbe_chem_comp_rdkit_properties.chi1n 6.810
_pdbe_chem_comp_rdkit_properties.chi2n 0.844
_pdbe_chem_comp_rdkit_properties.chi3n 0.844
_pdbe_chem_comp_rdkit_properties.chi4n 0.452
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.700
_pdbe_chem_comp_rdkit_properties.kappa1 1.913
_pdbe_chem_comp_rdkit_properties.kappa2 2.924
_pdbe_chem_comp_rdkit_properties.kappa3 1.238
_pdbe_chem_comp_rdkit_properties.Phi 0.559
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
9U2 UniChem PDBe 9U2
9U2 UniChem ZINC ZINC000038292515
9U2 UniChem SureChEMBL SCHEMBL6296384
9U2 UniChem 'PubChem TPHARMA' 16214312
9U2 UniChem PubChem 11137386
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
9U2 O81 -0.407 -2.291 0.471 ETKDGv3 1
9U2 C81 -1.368 -1.525 0.732 ETKDGv3 2
9U2 C82 -1.447 -0.144 0.221 ETKDGv3 3
9U2 C84 -0.423 0.639 -0.197 ETKDGv3 4
9U2 C85 1.073 0.393 -0.216 ETKDGv3 5
9U2 S81 -1.094 2.208 -0.715 ETKDGv3 6
9U2 C83 -2.732 1.686 -0.300 ETKDGv3 7
9U2 N81 -2.744 0.478 0.162 ETKDGv3 8
9U2 CM8 1.504 -0.554 -1.342 ETKDGv3 9
9U2 CM9 1.644 -0.002 1.152 ETKDGv3 10
9U2 H1 -2.200 -1.914 1.303 ETKDGv3 11
9U2 H85 1.542 1.373 -0.457 ETKDGv3 12
9U2 H83 -3.626 2.284 -0.407 ETKDGv3 13
9U2 H882 1.083 -0.207 -2.310 ETKDGv3 14
9U2 H883 1.177 -1.594 -1.168 ETKDGv3 15
9U2 H881 2.611 -0.553 -1.428 ETKDGv3 16
9U2 H992 1.251 0.675 1.940 ETKDGv3 17
9U2 H993 2.751 0.096 1.135 ETKDGv3 18
9U2 H991 1.407 -1.046 1.424 ETKDGv3 19
#