data_9XA
#
_chem_comp.id 9XA
_chem_comp.name
4-{6-(tert-butylsulfonyl)-7-[2-(4-methylpiperazin-1-yl)ethoxy]imidazo[1,2-a]pyridin-3-yl}-6-chloropyridin-2-amine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H31 Cl N6 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-06-21
_chem_comp.pdbx_modified_date 2017-10-20
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 507.049
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 9XA
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5W5O
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9XA C2 C1 C 0 1 Y N N N N N 1.757 15.021 93.404 -0.847 2.293 0.765 C2 9XA 1
9XA C3 C2 C 0 1 Y N N N N N 0.634 14.197 92.944 0.518 1.998 0.929 C3 9XA 2
9XA C11 C3 C 0 1 N N N N N N -1.927 12.694 92.727 3.143 1.479 1.256 C11 9XA 3
9XA C12 C4 C 0 1 N N N N N N -3.367 12.527 92.153 4.573 0.947 1.375 C12 9XA 4
9XA C14 C5 C 0 1 Y N N N N N 3.103 18.087 94.797 -4.221 1.197 -0.074 C14 9XA 5
9XA C15 C6 C 0 1 N N N N N N -5.575 12.689 93.285 5.185 1.684 -0.849 C15 9XA 6
9XA C16 C7 C 0 1 N N N N N N -6.316 12.947 91.946 5.608 1.199 -2.238 C16 9XA 7
9XA C18 C8 C 0 1 N N N N N N -5.373 10.715 91.183 6.746 -0.686 -1.233 C18 9XA 8
9XA C19 C9 C 0 1 N N N N N N -4.791 10.543 92.611 6.323 -0.201 0.157 C19 9XA 9
9XA C20 C10 C 0 1 Y N N N N N 2.275 18.712 95.723 -5.462 1.722 0.302 C20 9XA 10
9XA C21 C11 C 0 1 Y N N N N N 2.640 19.948 96.261 -6.616 1.055 -0.079 C21 9XA 11
9XA C23 C12 C 0 1 Y N N N N N 4.633 19.966 94.993 -5.396 -0.589 -1.160 C23 9XA 12
9XA C24 C13 C 0 1 Y N N N N N 4.289 18.721 94.431 -4.202 0.011 -0.824 C24 9XA 13
9XA C27 C14 C 0 1 N N N N N N -6.631 12.167 89.664 7.962 1.358 -1.692 C27 9XA 14
9XA N1 N1 N 0 1 Y N N N N N 1.590 16.214 93.883 -1.713 1.303 0.382 N1 9XA 15
9XA C4 C15 C 0 1 Y N N N N N -0.589 14.714 93.085 0.959 0.723 0.704 C4 9XA 16
9XA C5 C16 C 0 1 Y N N N N N -0.701 16.050 93.707 0.041 -0.271 0.311 C5 9XA 17
9XA C6 C17 C 0 1 Y N N N N N 0.399 16.733 94.047 -1.264 0.034 0.160 C6 9XA 18
9XA C7 C18 C 0 1 Y N N N N N 2.773 16.740 94.190 -2.966 1.875 0.302 C7 9XA 19
9XA C8 C19 C 0 1 Y N N N N N 3.745 15.859 93.880 -2.820 3.191 0.638 C8 9XA 20
9XA N9 N2 N 0 1 Y N N N N N 2.978 14.755 93.356 -1.538 3.419 0.908 N9 9XA 21
9XA O10 O1 O 0 1 N N N N N N -1.723 14.117 92.686 2.273 0.418 0.856 O10 9XA 22
9XA N13 N3 N 0 1 N N N N N N -4.350 11.872 93.078 5.052 0.530 0.051 N13 9XA 23
9XA N17 N4 N 0 1 N N N N N N -6.441 11.751 91.073 6.879 0.469 -2.132 N17 9XA 24
9XA N22 N5 N 0 1 Y N N N N N 3.797 20.526 95.892 -6.550 -0.064 -0.787 N22 9XA 25
9XA CL25 CL1 CL 0 0 N N N N N N 6.121 20.833 94.543 -5.384 -2.057 -2.087 CL25 9XA 26
9XA N26 N6 N 0 1 N N N N N N 1.862 20.599 97.165 -7.857 1.564 0.287 N26 9XA 27
9XA S28 S1 S 0 1 N N N N N N -2.264 16.796 93.971 0.599 -1.916 0.017 S28 9XA 28
9XA O29 O2 O 0 1 N N N N N N -2.043 18.245 93.938 -0.477 -2.532 -0.678 O29 9XA 29
9XA O30 O3 O 0 1 N N N N N N -3.225 16.244 93.002 1.869 -1.750 -0.599 O30 9XA 30
9XA C31 C20 C 0 1 N N N N N N -2.819 16.367 95.652 0.782 -2.634 1.672 C31 9XA 31
9XA C32 C21 C 0 1 N N N N N N -2.023 15.140 96.134 1.367 -4.043 1.555 C32 9XA 32
9XA C33 C22 C 0 1 N N N N N N -2.541 17.582 96.567 1.722 -1.761 2.506 C33 9XA 33
9XA C34 C23 C 0 1 N N N N N N -4.338 16.081 95.668 -0.586 -2.705 2.352 C34 9XA 34
9XA H1 H1 H 0 1 N N N N N N 0.789 13.219 92.512 1.210 2.770 1.231 H1 9XA 35
9XA H2 H2 H 0 1 N N N N N N -1.867 12.316 93.758 2.819 1.870 2.220 H2 9XA 36
9XA H3 H3 H 0 1 N N N N N N -1.189 12.171 92.101 3.112 2.274 0.512 H3 9XA 37
9XA H4 H4 H 0 1 N N N N N N -3.751 13.526 91.900 5.221 1.732 1.765 H4 9XA 38
9XA H5 H5 H 0 1 N N N N N N -3.301 11.918 91.239 4.588 0.094 2.053 H5 9XA 39
9XA H6 H6 H 0 1 N N N N N N -5.291 13.655 93.729 5.939 2.366 -0.457 H6 9XA 40
9XA H7 H7 H 0 1 N N N N N N -6.250 12.155 93.970 4.228 2.201 -0.921 H7 9XA 41
9XA H8 H8 H 0 1 N N N N N N -5.765 13.721 91.392 4.841 0.538 -2.642 H8 9XA 42
9XA H9 H9 H 0 1 N N N N N N -7.328 13.311 92.177 5.735 2.056 -2.899 H9 9XA 43
9XA H10 H10 H 0 1 N N N N N N -5.796 9.750 90.865 7.703 -1.203 -1.161 H10 9XA 44
9XA H11 H11 H 0 1 N N N N N N -4.551 10.995 90.508 5.993 -1.368 -1.625 H11 9XA 45
9XA H12 H12 H 0 1 N N N N N N -5.564 10.146 93.286 6.195 -1.058 0.818 H12 9XA 46
9XA H13 H13 H 0 1 N N N N N N -3.936 9.852 92.586 7.089 0.460 0.561 H13 9XA 47
9XA H14 H14 H 0 1 N N N N N N 1.351 18.242 96.026 -5.520 2.633 0.879 H14 9XA 48
9XA H15 H15 H 0 1 N N N N N N 4.948 18.255 93.713 -3.264 -0.425 -1.133 H15 9XA 49
9XA H16 H16 H 0 1 N N N N N N -7.422 12.930 89.610 8.904 0.808 -1.687 H16 9XA 50
9XA H17 H17 H 0 1 N N N N N N -5.691 12.586 89.275 8.039 2.203 -2.375 H17 9XA 51
9XA H18 H18 H 0 1 N N N N N N -6.921 11.295 89.060 7.748 1.721 -0.687 H18 9XA 52
9XA H19 H19 H 0 1 N N N N N N 0.303 17.725 94.462 -1.961 -0.734 -0.141 H19 9XA 53
9XA H20 H20 H 0 1 N N N N N N 4.815 15.954 93.994 -3.613 3.924 0.675 H20 9XA 54
9XA H23 H23 H 0 1 N N N N N N 2.302 21.458 97.427 -7.912 2.382 0.806 H23 9XA 55
9XA H24 H24 H 0 1 N N N N N N 0.969 20.793 96.758 -8.668 1.102 0.024 H24 9XA 56
9XA H25 H25 H 0 1 N N N N N N -2.347 14.868 97.149 2.342 -3.993 1.070 H25 9XA 57
9XA H26 H26 H 0 1 N N N N N N -2.204 14.295 95.453 1.477 -4.475 2.549 H26 9XA 58
9XA H27 H27 H 0 1 N N N N N N -0.950 15.380 96.144 0.698 -4.666 0.961 H27 9XA 59
9XA H28 H28 H 0 1 N N N N N N -2.867 17.352 97.592 1.305 -0.757 2.590 H28 9XA 60
9XA H29 H29 H 0 1 N N N N N N -1.463 17.803 96.566 1.832 -2.193 3.501 H29 9XA 61
9XA H30 H30 H 0 1 N N N N N N -3.095 18.456 96.194 2.697 -1.711 2.022 H30 9XA 62
9XA H31 H31 H 0 1 N N N N N N -4.653 15.824 96.690 -1.281 -3.252 1.715 H31 9XA 63
9XA H32 H32 H 0 1 N N N N N N -4.883 16.975 95.330 -0.491 -3.217 3.309 H32 9XA 64
9XA H33 H33 H 0 1 N N N N N N -4.560 15.240 94.994 -0.963 -1.695 2.516 H33 9XA 65
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9XA C27 N17 SING N N 1
9XA N17 C18 SING N N 2
9XA N17 C16 SING N N 3
9XA C18 C19 SING N N 4
9XA C16 C15 SING N N 5
9XA C12 C11 SING N N 6
9XA C12 N13 SING N N 7
9XA C19 N13 SING N N 8
9XA O10 C11 SING N N 9
9XA O10 C4 SING N N 10
9XA C3 C4 DOUB Y N 11
9XA C3 C2 SING Y N 12
9XA O30 S28 DOUB N N 13
9XA N13 C15 SING N N 14
9XA C4 C5 SING Y N 15
9XA N9 C2 DOUB Y N 16
9XA N9 C8 SING Y N 17
9XA C2 N1 SING Y N 18
9XA C5 S28 SING N N 19
9XA C5 C6 DOUB Y N 20
9XA C8 C7 DOUB Y N 21
9XA N1 C6 SING Y N 22
9XA N1 C7 SING Y N 23
9XA O29 S28 DOUB N N 24
9XA S28 C31 SING N N 25
9XA C7 C14 SING N N 26
9XA C24 C14 DOUB Y N 27
9XA C24 C23 SING Y N 28
9XA CL25 C23 SING N N 29
9XA C14 C20 SING Y N 30
9XA C23 N22 DOUB Y N 31
9XA C31 C34 SING N N 32
9XA C31 C32 SING N N 33
9XA C31 C33 SING N N 34
9XA C20 C21 DOUB Y N 35
9XA N22 C21 SING Y N 36
9XA C21 N26 SING N N 37
9XA C3 H1 SING N N 38
9XA C11 H2 SING N N 39
9XA C11 H3 SING N N 40
9XA C12 H4 SING N N 41
9XA C12 H5 SING N N 42
9XA C15 H6 SING N N 43
9XA C15 H7 SING N N 44
9XA C16 H8 SING N N 45
9XA C16 H9 SING N N 46
9XA C18 H10 SING N N 47
9XA C18 H11 SING N N 48
9XA C19 H12 SING N N 49
9XA C19 H13 SING N N 50
9XA C20 H14 SING N N 51
9XA C24 H15 SING N N 52
9XA C27 H16 SING N N 53
9XA C27 H17 SING N N 54
9XA C27 H18 SING N N 55
9XA C6 H19 SING N N 56
9XA C8 H20 SING N N 57
9XA N26 H23 SING N N 58
9XA N26 H24 SING N N 59
9XA C32 H25 SING N N 60
9XA C32 H26 SING N N 61
9XA C32 H27 SING N N 62
9XA C33 H28 SING N N 63
9XA C33 H29 SING N N 64
9XA C33 H30 SING N N 65
9XA C34 H31 SING N N 66
9XA C34 H32 SING N N 67
9XA C34 H33 SING N N 68
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9XA SMILES ACDLabs 12.01 c14n(cc(c(c1)OCCN2CCN(CC2)C)S(C(C)(C)C)(=O)=O)c(c3cc(N)nc(c3)Cl)cn4
9XA InChI InChI 1.03 InChI=1S/C23H31ClN6O3S/c1-23(2,3)34(31,32)19-15-30-17(16-11-20(24)27-21(25)12-16)14-26-22(30)13-18(19)33-10-9-29-7-5-28(4)6-8-29/h11-15H,5-10H2,1-4H3,(H2,25,27)
9XA InChIKey InChI 1.03 PIIVPMZRLRQOTG-UHFFFAOYSA-N
9XA SMILES_CANONICAL CACTVS 3.385 CN1CCN(CCOc2cc3ncc(n3cc2[S](=O)(=O)C(C)(C)C)c4cc(N)nc(Cl)c4)CC1
9XA SMILES CACTVS 3.385 CN1CCN(CCOc2cc3ncc(n3cc2[S](=O)(=O)C(C)(C)C)c4cc(N)nc(Cl)c4)CC1
9XA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC(C)(C)S(=O)(=O)c1cn2c(cc1OCCN3CCN(CC3)C)ncc2c4cc(nc(c4)Cl)N
9XA SMILES "OpenEye OEToolkits" 2.0.6 CC(C)(C)S(=O)(=O)c1cn2c(cc1OCCN3CCN(CC3)C)ncc2c4cc(nc(c4)Cl)N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9XA "SYSTEMATIC NAME" ACDLabs 12.01 4-{6-(tert-butylsulfonyl)-7-[2-(4-methylpiperazin-1-yl)ethoxy]imidazo[1,2-a]pyridin-3-yl}-6-chloropyridin-2-amine
9XA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 4-[6-~{tert}-butylsulfonyl-7-[2-(4-methylpiperazin-1-yl)ethoxy]imidazo[1,2-a]pyridin-3-yl]-6-chloranyl-pyridin-2-amine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9XA 'Create component' 2017-06-21 RCSB
9XA 'Initial release' 2017-10-25 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
9XA C2 C 9.495 0.979 1
9XA C3 C 8.196 0.229 2
9XA C11 C 5.598 -1.271 3
9XA C12 C 4.299 -2.021 4
9XA C14 C 11.380 4.362 5
9XA C15 C 5.598 -4.271 6
9XA C16 C 5.598 -5.771 7
9XA C18 C 3.000 -5.771 8
9XA C19 C 3.000 -4.271 9
9XA C20 C 12.848 4.671 10
9XA C21 C 13.314 6.097 11
9XA C23 C 10.845 6.904 12
9XA C24 C 10.379 5.479 13
9XA C27 C 4.299 -8.021 14
9XA N1 N 9.495 2.479 15
9XA C4 C 6.897 0.979 16
9XA C5 C 6.897 2.479 17
9XA C6 C 8.196 3.229 18
9XA C7 C 10.915 2.936 19
9XA C8 C 11.790 1.729 20
9XA N9 N 10.915 0.522 21
9XA O10 O 5.598 0.229 22
9XA N13 N 4.299 -3.521 23
9XA N17 N 4.299 -6.521 24
9XA N22 N 12.312 7.214 25
9XA CL25 Cl 9.843 8.021 26
9XA N26 N 14.782 6.407 27
9XA S28 S 5.598 3.229 28
9XA O29 O 4.848 1.930 29
9XA O30 O 6.348 4.528 30
9XA C31 C 4.299 3.979 31
9XA C32 C 3.549 2.680 32
9XA C33 C 5.049 5.278 33
9XA C34 C 3.000 4.729 34
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
9XA C27 N17 SINGLE NONE 1
9XA N17 C18 SINGLE NONE 2
9XA N17 C16 SINGLE NONE 3
9XA C18 C19 SINGLE NONE 4
9XA C16 C15 SINGLE NONE 5
9XA C12 C11 SINGLE NONE 6
9XA C12 N13 SINGLE NONE 7
9XA C19 N13 SINGLE NONE 8
9XA O10 C11 SINGLE NONE 9
9XA O10 C4 SINGLE NONE 10
9XA C3 C4 DOUBLE NONE 11
9XA C3 C2 SINGLE NONE 12
9XA O30 S28 DOUBLE NONE 13
9XA N13 C15 SINGLE NONE 14
9XA C4 C5 SINGLE NONE 15
9XA N9 C2 DOUBLE NONE 16
9XA N9 C8 SINGLE NONE 17
9XA C2 N1 SINGLE NONE 18
9XA C5 S28 SINGLE NONE 19
9XA C5 C6 DOUBLE NONE 20
9XA C8 C7 DOUBLE NONE 21
9XA N1 C6 SINGLE NONE 22
9XA N1 C7 SINGLE NONE 23
9XA O29 S28 DOUBLE NONE 24
9XA S28 C31 SINGLE NONE 25
9XA C7 C14 SINGLE NONE 26
9XA C24 C14 SINGLE NONE 27
9XA C24 C23 DOUBLE NONE 28
9XA CL25 C23 SINGLE NONE 29
9XA C14 C20 DOUBLE NONE 30
9XA C23 N22 SINGLE NONE 31
9XA C31 C34 SINGLE NONE 32
9XA C31 C32 SINGLE NONE 33
9XA C31 C33 SINGLE NONE 34
9XA C20 C21 SINGLE NONE 35
9XA N22 C21 DOUBLE NONE 36
9XA C21 N26 SINGLE NONE 37
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
9XA MurckoScaffold S1 scaffold c1cc(-c2cnc3cc(OCCN4CCNCC4)ccn23)ccn1 InChI=1S/C18H21N5O/c1-4-19-5-2-15(1)17-14-21-18-13-16(3-8-23(17)18)24-12-11-22-9-6-20-7-10-22/h1-5,8,13-14,20H,6-7,9-12H2 AXWXNNFQIYASJN-UHFFFAOYSA-N
9XA imidazole F1 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
9XA piperazine F2 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
9XA pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
9XA Z425810472 F4 fragment CS(=O)(=O)c1cccnc1 InChI=1S/C6H7NO2S/c1-10(8,9)6-3-2-4-7-5-6/h2-5H,1H3 HZSAPNSHGPNDHF-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
9XA C2 S1 1
9XA C3 S1 1
9XA C11 S1 1
9XA C12 S1 1
9XA C14 S1 1
9XA C15 S1 1
9XA C16 S1 1
9XA C18 S1 1
9XA C19 S1 1
9XA C20 S1 1
9XA C21 S1 1
9XA C23 S1 1
9XA C24 S1 1
9XA N1 S1 1
9XA C4 S1 1
9XA C5 S1 1
9XA C6 S1 1
9XA C7 S1 1
9XA C8 S1 1
9XA N9 S1 1
9XA O10 S1 1
9XA N13 S1 1
9XA N17 S1 1
9XA N22 S1 1
9XA C7 F1 1
9XA C8 F1 1
9XA N9 F1 1
9XA C2 F1 1
9XA N1 F1 1
9XA N13 F2 1
9XA C19 F2 1
9XA C18 F2 1
9XA N17 F2 1
9XA C16 F2 1
9XA C15 F2 1
9XA C2 F3 1
9XA C3 F3 1
9XA C4 F3 1
9XA C5 F3 1
9XA C6 F3 1
9XA N1 F3 1
9XA C21 F3 2
9XA C20 F3 2
9XA C14 F3 2
9XA C24 F3 2
9XA C23 F3 2
9XA N22 F3 2
9XA C31 F4 1
9XA S28 F4 1
9XA O30 F4 1
9XA O29 F4 1
9XA C5 F4 1
9XA C4 F4 1
9XA C3 F4 1
9XA C2 F4 1
9XA N1 F4 1
9XA C6 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 9XA
_pdbe_chem_comp_rdkit_properties.exactmw 506.187
_pdbe_chem_comp_rdkit_properties.amw 507.060
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 34
_pdbe_chem_comp_rdkit_properties.NumAtoms 65
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.478
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 248.626
_pdbe_chem_comp_rdkit_properties.tpsa 106.060
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.285
_pdbe_chem_comp_rdkit_properties.CrippenMR 130.927
_pdbe_chem_comp_rdkit_properties.chi0v 17.767
_pdbe_chem_comp_rdkit_properties.chi1v 10.330
_pdbe_chem_comp_rdkit_properties.chi2v 5.583
_pdbe_chem_comp_rdkit_properties.chi3v 5.583
_pdbe_chem_comp_rdkit_properties.chi4v 3.364
_pdbe_chem_comp_rdkit_properties.chi0n 47.194
_pdbe_chem_comp_rdkit_properties.chi1n 23.864
_pdbe_chem_comp_rdkit_properties.chi2n 3.783
_pdbe_chem_comp_rdkit_properties.chi3n 3.783
_pdbe_chem_comp_rdkit_properties.chi4n 2.335
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.400
_pdbe_chem_comp_rdkit_properties.kappa1 6.876
_pdbe_chem_comp_rdkit_properties.kappa2 9.332
_pdbe_chem_comp_rdkit_properties.kappa3 4.998
_pdbe_chem_comp_rdkit_properties.Phi 1.887
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
9XA UniChem ChEMBL CHEMBL4162788
9XA UniChem PDBe 9XA
9XA UniChem PubChem 137348872
9XA UniChem BindingDb 50279296
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
9XA C2 -0.895 0.717 -1.944 ETKDGv3 1
9XA C3 0.139 -0.315 -1.896 ETKDGv3 2
9XA C11 2.379 -2.241 -1.373 ETKDGv3 3
9XA C12 3.376 -1.326 -0.658 ETKDGv3 4
9XA C14 -3.814 2.410 -0.524 ETKDGv3 5
9XA C15 3.123 0.879 0.428 ETKDGv3 6
9XA C16 4.589 1.230 0.702 ETKDGv3 7
9XA C18 5.077 1.167 -1.662 ETKDGv3 8
9XA C19 3.624 0.758 -1.962 ETKDGv3 9
9XA C20 -4.054 3.725 -0.373 ETKDGv3 10
9XA C21 -5.259 4.170 0.361 ETKDGv3 11
9XA C23 -5.864 1.876 0.687 ETKDGv3 12
9XA C24 -4.785 1.436 0.029 ETKDGv3 13
9XA C27 6.532 2.370 -0.160 ETKDGv3 14
9XA N1 -1.915 0.727 -0.974 ETKDGv3 15
9XA C4 0.153 -1.161 -0.839 ETKDGv3 16
9XA C5 -0.861 -1.021 0.266 ETKDGv3 17
9XA C6 -1.834 -0.092 0.192 ETKDGv3 18
9XA C7 -2.614 1.931 -1.244 ETKDGv3 19
9XA C8 -2.036 2.511 -2.295 ETKDGv3 20
9XA N9 -0.918 1.733 -2.743 ETKDGv3 21
9XA O10 1.101 -2.195 -0.733 ETKDGv3 22
9XA N13 2.977 0.091 -0.811 ETKDGv3 23
9XA N17 5.140 1.984 -0.437 ETKDGv3 24
9XA N22 -6.084 3.287 0.847 ETKDGv3 25
9XA CL25 -7.025 0.739 1.344 ETKDGv3 26
9XA N26 -5.518 5.561 0.542 ETKDGv3 27
9XA S28 -0.768 -2.053 1.700 ETKDGv3 28
9XA O29 0.668 -2.404 1.975 ETKDGv3 29
9XA O30 -1.295 -1.295 2.887 ETKDGv3 30
9XA C31 -1.734 -3.560 1.473 ETKDGv3 31
9XA C32 -3.208 -3.194 1.227 ETKDGv3 32
9XA C33 -1.190 -4.347 0.269 ETKDGv3 33
9XA C34 -1.624 -4.423 2.742 ETKDGv3 34
9XA H1 0.858 -0.373 -2.699 ETKDGv3 35
9XA H2 2.757 -3.282 -1.298 ETKDGv3 36
9XA H3 2.308 -2.008 -2.454 ETKDGv3 37
9XA H4 3.403 -1.631 0.412 ETKDGv3 38
9XA H5 4.392 -1.514 -1.065 ETKDGv3 39
9XA H6 2.539 1.820 0.328 ETKDGv3 40
9XA H7 2.692 0.334 1.296 ETKDGv3 41
9XA H8 4.629 1.854 1.622 ETKDGv3 42
9XA H9 5.173 0.300 0.889 ETKDGv3 43
9XA H10 5.450 1.760 -2.526 ETKDGv3 44
9XA H11 5.721 0.264 -1.573 ETKDGv3 45
9XA H12 3.040 1.668 -2.222 ETKDGv3 46
9XA H13 3.600 0.098 -2.857 ETKDGv3 47
9XA H14 -3.365 4.465 -0.761 ETKDGv3 48
9XA H15 -4.639 0.373 -0.118 ETKDGv3 49
9XA H16 6.576 3.019 0.741 ETKDGv3 50
9XA H17 7.176 1.477 0.005 ETKDGv3 51
9XA H18 6.941 2.959 -1.009 ETKDGv3 52
9XA H19 -2.542 0.037 0.999 ETKDGv3 53
9XA H20 -2.357 3.432 -2.764 ETKDGv3 54
9XA H23 -4.864 6.279 0.159 ETKDGv3 55
9XA H24 -6.367 5.878 1.061 ETKDGv3 56
9XA H25 -3.611 -2.600 2.075 ETKDGv3 57
9XA H26 -3.316 -2.597 0.298 ETKDGv3 58
9XA H27 -3.825 -4.112 1.120 ETKDGv3 59
9XA H28 -1.754 -5.296 0.136 ETKDGv3 60
9XA H29 -1.289 -3.755 -0.665 ETKDGv3 61
9XA H30 -0.117 -4.597 0.416 ETKDGv3 62
9XA H31 -2.212 -5.360 2.630 ETKDGv3 63
9XA H32 -0.566 -4.698 2.938 ETKDGv3 64
9XA H33 -2.012 -3.872 3.625 ETKDGv3 65
#