data_A1AMP
#
_chem_comp.id A1AMP
_chem_comp.name
"4-{[(1S)-1-(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6~,2-benzothiazin-7-yl)-2-methylpropyl]amino}-N-ethyl-7H-pyrrolo[2,3-d]pyrimidine-6-carboxamide"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H26 N6 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2024-04-15
_chem_comp.pdbx_modified_date 2024-05-10
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 442.535
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1AMP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7H0K
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1AMP N1 N1 N 0 1 N N N N N N 4.619 -15.757 17.623 0.466 -0.719 0.444 N1 A1AMP 1
A1AMP N3 N2 N 0 1 Y N N N N N 4.922 -14.621 15.606 1.382 -2.595 -0.649 N3 A1AMP 2
A1AMP C4 C1 C 0 1 Y N N N N N 7.741 -16.466 17.392 3.338 0.454 0.235 C4 A1AMP 3
A1AMP C5 C2 C 0 1 Y N N N N N 6.816 -15.737 16.565 2.806 -0.781 -0.191 C5 A1AMP 4
A1AMP C6 C3 C 0 1 Y N N N N N 5.445 -15.340 16.619 1.532 -1.379 -0.133 C6 A1AMP 5
A1AMP C7 C4 C 0 1 N N S N N N 3.295 -15.201 17.903 -0.851 -1.358 0.493 C7 A1AMP 6
A1AMP C8 C5 C 0 1 Y N N N N N 3.316 -14.060 18.908 -1.920 -0.299 0.582 C8 A1AMP 7
A1AMP C10 C6 C 0 1 Y N N N N N 2.821 -11.785 19.548 -2.716 1.778 1.465 C10 A1AMP 8
A1AMP C13 C7 C 0 1 Y N N N N N 3.939 -14.225 20.138 -3.099 -0.439 -0.124 C13 A1AMP 9
A1AMP C15 C8 C 0 1 N N N N N N 3.404 -10.782 21.776 -4.951 2.702 0.955 C15 A1AMP 10
A1AMP C17 C9 C 0 1 N N N N N N 2.203 -17.403 17.227 -2.307 -2.935 1.773 C17 A1AMP 11
A1AMP C20 C10 C 0 1 Y N N N N N 7.507 -15.375 15.400 3.858 -1.501 -0.793 C20 A1AMP 12
A1AMP O2 O1 O 0 1 N N N N N N 6.217 -13.883 22.232 -6.155 -0.874 -0.599 O2 A1AMP 13
A1AMP S S1 S 0 1 N N N N N N 4.885 -13.468 22.549 -5.549 0.344 -1.008 S A1AMP 14
A1AMP O1 O2 O 0 1 N N N N N N 4.086 -14.306 23.391 -5.195 0.631 -2.354 O1 A1AMP 15
A1AMP N2 N3 N 0 1 N N N N N N 4.964 -11.989 23.232 -6.554 1.574 -0.501 N2 A1AMP 16
A1AMP C14 C11 C 0 1 N N N N N N 3.704 -11.229 23.183 -5.891 2.864 -0.228 C14 A1AMP 17
A1AMP C11 C12 C 0 1 Y N N N N N 3.435 -11.932 20.794 -3.908 1.640 0.760 C11 A1AMP 18
A1AMP C9 C13 C 0 1 Y N N N N N 2.757 -12.820 18.628 -1.731 0.817 1.376 C9 A1AMP 19
A1AMP C12 C14 C 0 1 Y N N N N N 4.020 -13.183 21.053 -4.080 0.533 -0.043 C12 A1AMP 20
A1AMP C16 C15 C 0 1 N N N N N N 2.326 -16.332 18.318 -0.931 -2.267 1.721 C16 A1AMP 21
A1AMP C18 C16 C 0 1 N N N N N N 0.949 -15.786 18.701 0.154 -3.342 1.631 C18 A1AMP 22
A1AMP C19 C17 C 0 1 Y N N N N N 5.725 -14.326 14.573 2.397 -3.231 -1.203 C19 A1AMP 23
A1AMP N4 N4 N 0 1 Y N N N N N 7.005 -14.664 14.373 3.605 -2.714 -1.280 N4 A1AMP 24
A1AMP N5 N5 N 0 1 Y N N N N N 8.790 -15.863 15.492 4.978 -0.721 -0.727 N5 A1AMP 25
A1AMP C3 C18 C 0 1 Y N N N N N 8.934 -16.510 16.714 4.657 0.471 -0.100 C3 A1AMP 26
A1AMP C2 C19 C 0 1 N N N N N N 10.229 -17.093 17.133 5.589 1.575 0.162 C2 A1AMP 27
A1AMP O O3 O 0 1 N N N N N N 10.361 -17.573 18.260 5.198 2.581 0.722 O A1AMP 28
A1AMP N N6 N 0 1 N N N N N N 11.225 -17.064 16.246 6.878 1.473 -0.219 N A1AMP 29
A1AMP C1 C20 C 0 1 N N N N N N 12.443 -17.882 16.407 7.808 2.574 0.042 C1 A1AMP 30
A1AMP C C21 C 0 1 N N N N N N 12.193 -19.357 16.253 9.196 2.206 -0.487 C A1AMP 31
A1AMP H9 H1 H 0 1 N N N N N N 4.470 -16.732 17.458 0.590 0.166 0.821 H9 A1AMP 32
A1AMP H8 H2 H 0 1 N N N N N N 7.536 -16.896 18.361 2.796 1.244 0.735 H8 A1AMP 33
A1AMP H H3 H 0 1 N N N N N N 2.906 -14.787 16.961 -1.001 -1.951 -0.409 H A1AMP 34
A1AMP H11 H4 H 0 1 N N N N N N 2.381 -10.832 19.293 -2.558 2.648 2.083 H11 A1AMP 35
A1AMP H12 H5 H 0 1 N N N N N N 4.369 -15.183 20.388 -3.255 -1.310 -0.743 H12 A1AMP 36
A1AMP H16 H6 H 0 1 N N N N N N 2.404 -10.325 21.755 -4.450 3.653 1.134 H16 A1AMP 37
A1AMP H17 H7 H 0 1 N N N N N N 4.154 -10.037 21.473 -5.541 2.449 1.836 H17 A1AMP 38
A1AMP H20 H8 H 0 1 N N N N N N 1.507 -18.187 17.559 -2.457 -3.528 0.871 H20 A1AMP 39
A1AMP H19 H9 H 0 1 N N N N N N 1.823 -16.943 16.303 -2.364 -3.583 2.647 H19 A1AMP 40
A1AMP H21 H10 H 0 1 N N N N N N 3.191 -17.847 17.036 -3.080 -2.169 1.837 H21 A1AMP 41
A1AMP H13 H11 H 0 1 N N N N N N 5.225 -12.101 24.191 -7.510 1.451 -0.394 H13 A1AMP 42
A1AMP H14 H12 H 0 1 N N N N N N 2.883 -11.868 23.541 -6.643 3.618 0.006 H14 A1AMP 43
A1AMP H15 H13 H 0 1 N N N N N N 3.791 -10.345 23.832 -5.324 3.175 -1.105 H15 A1AMP 44
A1AMP H10 H14 H 0 1 N N N N N N 2.265 -12.660 17.680 -0.810 0.937 1.927 H10 A1AMP 45
A1AMP H18 H15 H 0 1 N N N N N N 2.750 -16.816 19.210 -0.781 -1.674 2.623 H18 A1AMP 46
A1AMP H22 H16 H 0 1 N N N N N N 0.291 -16.619 18.989 0.004 -3.935 0.729 H22 A1AMP 47
A1AMP H23 H17 H 0 1 N N N N N N 1.053 -15.091 19.547 1.134 -2.867 1.594 H23 A1AMP 48
A1AMP H24 H18 H 0 1 N N N N N N 0.513 -15.255 17.842 0.097 -3.990 2.505 H24 A1AMP 49
A1AMP H25 H19 H 0 1 N N N N N N 5.275 -13.731 13.792 2.230 -4.218 -1.610 H25 A1AMP 50
A1AMP H1 H20 H 0 1 N N N N N N 9.501 -15.768 14.795 5.854 -0.963 -1.065 H1 A1AMP 51
A1AMP H7 H21 H 0 1 N N N N N N 11.144 -16.469 15.446 7.190 0.670 -0.666 H7 A1AMP 52
A1AMP H5 H22 H 0 1 N N N N N N 12.855 -17.701 17.410 7.455 3.475 -0.461 H5 A1AMP 53
A1AMP H6 H23 H 0 1 N N N N N N 13.176 -17.571 15.648 7.865 2.756 1.115 H6 A1AMP 54
A1AMP H2 H24 H 0 1 N N N N N N 13.138 -19.905 16.384 9.549 1.305 0.016 H2 A1AMP 55
A1AMP H3 H25 H 0 1 N N N N N N 11.469 -19.687 17.012 9.140 2.024 -1.560 H3 A1AMP 56
A1AMP H4 H26 H 0 1 N N N N N N 11.789 -19.558 15.250 9.888 3.025 -0.293 H4 A1AMP 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1AMP C C1 SING N N 1
A1AMP C1 N SING N N 2
A1AMP N C2 SING N N 3
A1AMP O C2 DOUB N N 4
A1AMP C2 C3 SING N N 5
A1AMP C3 C4 DOUB Y N 6
A1AMP C4 C5 SING Y N 7
A1AMP C5 C6 DOUB Y N 8
A1AMP C6 N1 SING N N 9
A1AMP N1 C7 SING N N 10
A1AMP C7 C8 SING N N 11
A1AMP C8 C9 DOUB Y N 12
A1AMP C9 C10 SING Y N 13
A1AMP C10 C11 DOUB Y N 14
A1AMP C11 C12 SING Y N 15
A1AMP C13 C12 DOUB Y N 16
A1AMP C8 C13 SING Y N 17
A1AMP C12 S SING N N 18
A1AMP O1 S DOUB N N 19
A1AMP S O2 DOUB N N 20
A1AMP N2 S SING N N 21
A1AMP C14 N2 SING N N 22
A1AMP C15 C14 SING N N 23
A1AMP C11 C15 SING N N 24
A1AMP C16 C7 SING N N 25
A1AMP C17 C16 SING N N 26
A1AMP C18 C16 SING N N 27
A1AMP N3 C6 SING Y N 28
A1AMP C19 N3 DOUB Y N 29
A1AMP N4 C19 SING Y N 30
A1AMP C20 N4 DOUB Y N 31
A1AMP C5 C20 SING Y N 32
A1AMP N5 C20 SING Y N 33
A1AMP C3 N5 SING Y N 34
A1AMP N1 H9 SING N N 35
A1AMP C4 H8 SING N N 36
A1AMP C7 H SING N N 37
A1AMP C10 H11 SING N N 38
A1AMP C13 H12 SING N N 39
A1AMP C15 H16 SING N N 40
A1AMP C15 H17 SING N N 41
A1AMP C17 H20 SING N N 42
A1AMP C17 H19 SING N N 43
A1AMP C17 H21 SING N N 44
A1AMP N2 H13 SING N N 45
A1AMP C14 H14 SING N N 46
A1AMP C14 H15 SING N N 47
A1AMP C9 H10 SING N N 48
A1AMP C16 H18 SING N N 49
A1AMP C18 H22 SING N N 50
A1AMP C18 H23 SING N N 51
A1AMP C18 H24 SING N N 52
A1AMP C19 H25 SING N N 53
A1AMP N5 H1 SING N N 54
A1AMP N H7 SING N N 55
A1AMP C1 H5 SING N N 56
A1AMP C1 H6 SING N N 57
A1AMP C H2 SING N N 58
A1AMP C H3 SING N N 59
A1AMP C H4 SING N N 60
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1AMP SMILES ACDLabs 12.01 "CCNC(=O)c1cc2c([NH]1)ncnc2NC(c1ccc2CCNS(=O)(=O)c2c1)C(C)C"
A1AMP InChI InChI 1.06 "InChI=1S/C21H26N6O3S/c1-4-22-21(28)16-10-15-19(26-16)23-11-24-20(15)27-18(12(2)3)14-6-5-13-7-8-25-31(29,30)17(13)9-14/h5-6,9-12,18,25H,4,7-8H2,1-3H3,(H,22,28)(H2,23,24,26,27)/t18-/m0/s1"
A1AMP InChIKey InChI 1.06 YEZOZCAEAOEUES-SFHVURJKSA-N
A1AMP SMILES_CANONICAL CACTVS 3.385 "CCNC(=O)c1[nH]c2ncnc(N[C@@H](C(C)C)c3ccc4CCN[S](=O)(=O)c4c3)c2c1"
A1AMP SMILES CACTVS 3.385 "CCNC(=O)c1[nH]c2ncnc(N[CH](C(C)C)c3ccc4CCN[S](=O)(=O)c4c3)c2c1"
A1AMP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCNC(=O)c1cc2c([nH]1)ncnc2N[C@H](c3ccc4c(c3)S(=O)(=O)NCC4)C(C)C"
A1AMP SMILES "OpenEye OEToolkits" 2.0.7 "CCNC(=O)c1cc2c([nH]1)ncnc2NC(c3ccc4c(c3)S(=O)(=O)NCC4)C(C)C"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A1AMP "SYSTEMATIC NAME" ACDLabs 12.01 "4-{[(1S)-1-(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6~,2-benzothiazin-7-yl)-2-methylpropyl]amino}-N-ethyl-7H-pyrrolo[2,3-d]pyrimidine-6-carboxamide"
A1AMP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[[(1~{S})-1-[1,1-bis(oxidanylidene)-3,4-dihydro-2~{H}-1$l^{6},2-benzothiazin-7-yl]-2-methyl-propyl]amino]-~{N}-ethyl-7~{H}-pyrrolo[2,3-d]pyrimidine-6-carboxamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1AMP 'Create component' 2024-04-15 RCSB
A1AMP 'Initial release' 2024-05-15 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
A1AMP N1 N 11.911 -0.592 1
A1AMP N3 N 10.621 -2.847 2
A1AMP C4 C 8.994 0.855 3
A1AMP C5 C 9.313 -0.602 4
A1AMP C6 C 10.615 -1.347 5
A1AMP C7 C 13.213 -1.337 6
A1AMP C8 C 14.509 -0.582 7
A1AMP C10 C 15.868 1.752 8
A1AMP C13 C 15.868 -1.352 9
A1AMP C15 C 18.508 1.700 10
A1AMP C17 C 14.521 -3.582 11
A1AMP C20 C 8.017 -1.357 12
A1AMP O2 O 17.758 -2.599 13
A1AMP S S 18.508 -1.300 14
A1AMP O1 O 19.258 -2.599 15
A1AMP N2 N 19.807 -0.550 16
A1AMP C14 C 19.807 0.950 17
A1AMP C11 C 17.209 0.950 18
A1AMP C9 C 14.509 0.981 19
A1AMP C12 C 17.209 -0.550 20
A1AMP C16 C 13.219 -2.837 21
A1AMP C18 C 11.923 -3.592 22
A1AMP C19 C 9.325 -3.602 23
A1AMP N4 N 8.023 -2.857 24
A1AMP N5 N 6.907 -0.360 25
A1AMP C3 C 7.510 1.004 26
A1AMP C2 C 6.755 2.300 27
A1AMP O O 7.500 3.602 28
A1AMP N N 5.255 2.294 29
A1AMP C1 C 4.500 3.590 30
A1AMP C C 3.000 3.584 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
A1AMP C C1 SINGLE NONE 1
A1AMP C1 N SINGLE NONE 2
A1AMP N C2 SINGLE NONE 3
A1AMP O C2 DOUBLE NONE 4
A1AMP C2 C3 SINGLE NONE 5
A1AMP C3 C4 DOUBLE NONE 6
A1AMP C4 C5 SINGLE NONE 7
A1AMP C5 C6 SINGLE NONE 8
A1AMP C6 N1 SINGLE NONE 9
A1AMP C7 N1 SINGLE BEGINDASH 10
A1AMP C7 C8 SINGLE NONE 11
A1AMP C8 C9 SINGLE NONE 12
A1AMP C9 C10 DOUBLE NONE 13
A1AMP C10 C11 SINGLE NONE 14
A1AMP C11 C12 DOUBLE NONE 15
A1AMP C13 C12 SINGLE NONE 16
A1AMP C8 C13 DOUBLE NONE 17
A1AMP C12 S SINGLE NONE 18
A1AMP O1 S DOUBLE NONE 19
A1AMP S O2 DOUBLE NONE 20
A1AMP N2 S SINGLE NONE 21
A1AMP C14 N2 SINGLE NONE 22
A1AMP C15 C14 SINGLE NONE 23
A1AMP C11 C15 SINGLE NONE 24
A1AMP C16 C7 SINGLE NONE 25
A1AMP C17 C16 SINGLE NONE 26
A1AMP C18 C16 SINGLE NONE 27
A1AMP N3 C6 DOUBLE NONE 28
A1AMP C19 N3 SINGLE NONE 29
A1AMP N4 C19 DOUBLE NONE 30
A1AMP C20 N4 SINGLE NONE 31
A1AMP C5 C20 DOUBLE NONE 32
A1AMP N5 C20 SINGLE NONE 33
A1AMP C3 N5 SINGLE NONE 34
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
A1AMP MurckoScaffold S1 scaffold 'O=S1(=O)NCCc2ccc(CNc3ncnc4[nH]ccc34)cc21' InChI=1S/C15H15N5O2S/c21-23(22)13-7-10(1-2-11(13)3-6-20-23)8-17-15-12-4-5-16-14(12)18-9-19-15/h1-2,4-5,7,9,20H,3,6,8H2,(H2,16,17,18,19) PJBCELISRJYFTK-UHFFFAOYSA-N
A1AMP amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
A1AMP phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
A1AMP pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
A1AMP pyrrole F4 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
A1AMP N1 S1 1
A1AMP N3 S1 1
A1AMP C4 S1 1
A1AMP C5 S1 1
A1AMP C6 S1 1
A1AMP C7 S1 1
A1AMP C8 S1 1
A1AMP C10 S1 1
A1AMP C13 S1 1
A1AMP C15 S1 1
A1AMP C20 S1 1
A1AMP O2 S1 1
A1AMP S S1 1
A1AMP O1 S1 1
A1AMP N2 S1 1
A1AMP C14 S1 1
A1AMP C11 S1 1
A1AMP C9 S1 1
A1AMP C12 S1 1
A1AMP C19 S1 1
A1AMP N4 S1 1
A1AMP N5 S1 1
A1AMP C3 S1 1
A1AMP N F1 1
A1AMP C2 F1 1
A1AMP O F1 1
A1AMP C3 F1 1
A1AMP C8 F2 1
A1AMP C9 F2 1
A1AMP C10 F2 1
A1AMP C11 F2 1
A1AMP C12 F2 1
A1AMP C13 F2 1
A1AMP C5 F3 1
A1AMP C6 F3 1
A1AMP N3 F3 1
A1AMP C19 F3 1
A1AMP N4 F3 1
A1AMP C20 F3 1
A1AMP C20 F4 1
A1AMP C5 F4 1
A1AMP C4 F4 1
A1AMP C3 F4 1
A1AMP N5 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id A1AMP
_pdbe_chem_comp_rdkit_properties.exactmw 442.179
_pdbe_chem_comp_rdkit_properties.amw 442.545
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 57
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.381
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 217.431
_pdbe_chem_comp_rdkit_properties.tpsa 128.870
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.270
_pdbe_chem_comp_rdkit_properties.CrippenMR 115.174
_pdbe_chem_comp_rdkit_properties.chi0v 15.633
_pdbe_chem_comp_rdkit_properties.chi1v 9.324
_pdbe_chem_comp_rdkit_properties.chi2v 4.808
_pdbe_chem_comp_rdkit_properties.chi3v 4.808
_pdbe_chem_comp_rdkit_properties.chi4v 3.227
_pdbe_chem_comp_rdkit_properties.chi0n 40.816
_pdbe_chem_comp_rdkit_properties.chi1n 20.673
_pdbe_chem_comp_rdkit_properties.chi2n 3.654
_pdbe_chem_comp_rdkit_properties.chi3n 3.654
_pdbe_chem_comp_rdkit_properties.chi4n 2.378
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.980
_pdbe_chem_comp_rdkit_properties.kappa1 6.292
_pdbe_chem_comp_rdkit_properties.kappa2 8.274
_pdbe_chem_comp_rdkit_properties.kappa3 4.127
_pdbe_chem_comp_rdkit_properties.Phi 1.679
#
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
A1AMP N1 0.158 1.509 -0.212 ETKDGv3 1
A1AMP N3 -0.822 -0.538 -0.986 ETKDGv3 2
A1AMP C4 2.864 -0.196 -0.173 ETKDGv3 3
A1AMP C5 1.511 -0.608 -0.527 ETKDGv3 4
A1AMP C6 0.236 0.122 -0.590 ETKDGv3 5
A1AMP C7 -1.041 2.360 -0.320 ETKDGv3 6
A1AMP C8 -2.284 1.668 0.246 ETKDGv3 7
A1AMP C10 -4.678 1.119 0.130 ETKDGv3 8
A1AMP C13 -2.196 1.052 1.441 ETKDGv3 9
A1AMP C15 -5.785 -0.258 2.002 ETKDGv3 10
A1AMP C17 0.024 3.887 -2.060 ETKDGv3 11
A1AMP C20 1.552 -1.874 -0.866 ETKDGv3 12
A1AMP O2 -2.678 0.475 4.619 ETKDGv3 13
A1AMP S -3.166 -0.478 3.565 ETKDGv3 14
A1AMP O1 -2.173 -1.593 3.391 ETKDGv3 15
A1AMP N2 -4.691 -1.144 4.053 ETKDGv3 16
A1AMP C14 -5.467 -1.493 2.861 ETKDGv3 17
A1AMP C11 -4.551 0.379 1.405 ETKDGv3 18
A1AMP C9 -3.619 1.728 -0.416 ETKDGv3 19
A1AMP C12 -3.364 0.374 2.042 ETKDGv3 20
A1AMP C16 -1.168 2.967 -1.752 ETKDGv3 21
A1AMP C18 -1.301 1.914 -2.866 ETKDGv3 22
A1AMP C19 -0.752 -1.935 -1.358 ETKDGv3 23
A1AMP N4 0.384 -2.578 -1.303 ETKDGv3 24
A1AMP N5 2.863 -2.402 -0.772 ETKDGv3 25
A1AMP C3 3.635 -1.279 -0.328 ETKDGv3 26
A1AMP C2 5.093 -1.309 -0.094 ETKDGv3 27
A1AMP O 5.696 -0.237 0.189 ETKDGv3 28
A1AMP N 5.827 -2.541 -0.177 ETKDGv3 29
A1AMP C1 7.282 -2.595 -0.043 ETKDGv3 30
A1AMP C 7.957 -2.069 -1.304 ETKDGv3 31
A1AMP H9 1.020 1.958 0.170 ETKDGv3 32
A1AMP H8 3.189 0.786 0.142 ETKDGv3 33
A1AMP H -0.884 3.230 0.357 ETKDGv3 34
A1AMP H11 -5.638 1.176 -0.367 ETKDGv3 35
A1AMP H12 -1.254 1.031 1.978 ETKDGv3 36
A1AMP H16 -6.322 0.498 2.614 ETKDGv3 37
A1AMP H17 -6.468 -0.575 1.184 ETKDGv3 38
A1AMP H20 0.104 4.687 -1.293 ETKDGv3 39
A1AMP H19 -0.114 4.376 -3.048 ETKDGv3 40
A1AMP H21 0.975 3.313 -2.079 ETKDGv3 41
A1AMP H13 -5.208 -0.406 4.586 ETKDGv3 42
A1AMP H14 -4.920 -2.251 2.257 ETKDGv3 43
A1AMP H15 -6.423 -1.959 3.184 ETKDGv3 44
A1AMP H10 -3.768 2.265 -1.340 ETKDGv3 45
A1AMP H18 -2.067 3.619 -1.779 ETKDGv3 46
A1AMP H22 -0.349 1.360 -3.006 ETKDGv3 47
A1AMP H23 -2.108 1.187 -2.645 ETKDGv3 48
A1AMP H24 -1.551 2.414 -3.826 ETKDGv3 49
A1AMP H25 -1.646 -2.449 -1.684 ETKDGv3 50
A1AMP H1 3.180 -3.359 -1.040 ETKDGv3 51
A1AMP H7 5.314 -3.445 -0.265 ETKDGv3 52
A1AMP H5 7.597 -3.649 0.117 ETKDGv3 53
A1AMP H6 7.606 -2.004 0.841 ETKDGv3 54
A1AMP H2 7.702 -1.001 -1.466 ETKDGv3 55
A1AMP H3 9.059 -2.160 -1.202 ETKDGv3 56
A1AMP H4 7.629 -2.660 -2.186 ETKDGv3 57
#