data_A7Y
#
_chem_comp.id A7Y
_chem_comp.name N-{(3R)-1-[(4-chlorophenyl)methyl]pyrrolidin-3-yl}-2-(3-methoxyphenyl)-N-methylquinoline-4-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C29 H28 Cl N3 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-07-10
_chem_comp.pdbx_modified_date 2017-08-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 486.005
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A7Y
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5WE8
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A7Y C2 C1 C 0 1 Y N N N N N 26.063 9.093 5.880 -7.830 1.497 0.561 C2 A7Y 1
A7Y C3 C2 C 0 1 Y N N N N N 27.043 9.271 6.859 -7.674 0.744 -0.589 C3 A7Y 2
A7Y C41 C3 C 0 1 Y N N N N N 17.614 9.152 8.426 4.431 1.487 -0.205 C41 A7Y 3
A7Y C42 C4 C 0 1 Y N N N N N 18.306 9.355 7.239 5.679 1.844 0.301 C42 A7Y 4
A7Y C44 C5 C 0 1 Y N N N N N 17.721 9.074 6.012 6.131 3.147 0.164 C44 A7Y 5
A7Y C45 C6 C 0 1 Y N N N N N 16.408 8.580 5.979 5.341 4.092 -0.475 C45 A7Y 6
A7Y C47 C7 C 0 1 Y N N N N N 15.703 8.374 7.173 4.102 3.738 -0.977 C47 A7Y 7
A7Y C49 C8 C 0 1 Y N N N N N 16.305 8.662 8.404 3.647 2.442 -0.851 C49 A7Y 8
A7Y C52 C9 C 0 1 N N N N N N 17.952 9.174 3.556 7.749 4.859 0.481 C52 A7Y 9
A7Y C56 C10 C 0 1 Y N N N N N 18.183 8.396 13.109 5.132 -2.992 1.366 C56 A7Y 10
A7Y C58 C11 C 0 1 Y N N N N N 18.782 8.650 14.345 4.707 -4.275 1.523 C58 A7Y 11
A7Y C60 C12 C 0 1 Y N N N N N 19.776 9.625 14.444 3.470 -4.688 1.031 C60 A7Y 12
A7Y C12 C13 C 0 1 N N N N N N 25.292 7.870 9.970 -4.815 -1.525 0.378 C12 A7Y 13
A7Y C16 C14 C 0 1 N N N N N N 23.594 9.701 10.160 -2.440 -1.888 0.016 C16 A7Y 14
A7Y C19 C15 C 0 1 N N R N N N 22.780 10.268 11.341 -1.505 -1.666 -1.187 C19 A7Y 15
A7Y C21 C16 C 0 1 N N N N N N 23.727 10.111 12.558 -2.186 -0.563 -2.030 C21 A7Y 16
A7Y C24 C17 C 0 1 N N N N N N 24.530 8.847 12.180 -3.667 -0.650 -1.583 C24 A7Y 17
A7Y C28 C18 C 0 1 N N N N N N 23.245 12.765 10.993 -0.063 0.028 0.034 C28 A7Y 18
A7Y C10 C19 C 0 1 Y N N N N N 24.837 8.516 6.211 -7.010 1.271 1.652 C10 A7Y 19
A7Y C32 C20 C 0 1 N N N N N N 20.989 11.881 10.847 0.909 -1.946 -1.012 C32 A7Y 20
A7Y C34 C21 C 0 1 Y N N N N N 19.939 10.785 10.894 2.224 -1.548 -0.465 C34 A7Y 21
A7Y C35 C22 C 0 1 Y N N N N N 19.582 10.085 12.061 3.051 -2.484 0.209 C35 A7Y 22
A7Y C36 C23 C 0 1 Y N N N N N 18.576 9.113 11.980 4.311 -2.061 0.702 C36 A7Y 23
A7Y C38 C24 C 0 1 Y N N N N N 18.312 9.480 9.682 3.941 0.095 -0.063 C38 A7Y 24
A7Y C39 C25 C 0 1 Y N N N N N 19.295 10.472 9.697 2.681 -0.244 -0.580 C39 A7Y 25
A7Y C5 C26 C 0 1 Y N N N N N 26.793 8.876 8.176 -6.698 -0.233 -0.648 C5 A7Y 26
A7Y C62 C27 C 0 1 Y N N N N N 20.170 10.339 13.309 2.651 -3.816 0.379 C62 A7Y 27
A7Y C7 C28 C 0 1 Y N N N N N 25.566 8.295 8.517 -5.879 -0.459 0.442 C7 A7Y 28
A7Y C8 C29 C 0 1 Y N N N N N 24.589 8.122 7.525 -6.034 0.293 1.592 C8 A7Y 29
A7Y N15 N1 N 0 1 N N N N N N 24.784 9.033 10.735 -3.566 -0.940 -0.130 N15 A7Y 30
A7Y N27 N2 N 0 1 N N N N N N 22.315 11.634 11.051 -0.188 -1.216 -0.730 N27 A7Y 31
A7Y N37 N3 N 0 1 Y N N N N N 17.969 8.840 10.812 4.700 -0.794 0.546 N37 A7Y 32
A7Y O33 O1 O 0 1 N N N N N N 20.562 13.003 10.626 0.818 -2.933 -1.716 O33 A7Y 33
A7Y O51 O2 O 0 1 N N N N N N 18.498 9.310 4.873 7.347 3.499 0.657 O51 A7Y 34
A7Y CL1 CL1 CL 0 0 N N N N N N 26.362 9.587 4.230 -9.050 2.729 0.633 CL1 A7Y 35
A7Y H1 H1 H 0 1 N N N N N N 27.993 9.713 6.599 -8.314 0.920 -1.441 H1 A7Y 36
A7Y H2 H2 H 0 1 N N N N N N 19.315 9.738 7.271 6.292 1.107 0.798 H2 A7Y 37
A7Y H3 H3 H 0 1 N N N N N N 15.940 8.358 5.032 5.694 5.107 -0.580 H3 A7Y 38
A7Y H4 H4 H 0 1 N N N N N N 14.693 7.992 7.143 3.491 4.478 -1.474 H4 A7Y 39
A7Y H5 H5 H 0 1 N N N N N N 15.764 8.507 9.326 2.678 2.169 -1.245 H5 A7Y 40
A7Y H6 H6 H 0 1 N N N N N N 18.728 9.404 2.811 7.786 5.092 -0.583 H6 A7Y 41
A7Y H7 H7 H 0 1 N N N N N N 17.599 8.143 3.410 7.033 5.516 0.974 H7 A7Y 42
A7Y H8 H8 H 0 1 N N N N N N 17.109 9.871 3.435 8.737 5.005 0.919 H8 A7Y 43
A7Y H9 H9 H 0 1 N N N N N N 17.414 7.642 13.028 6.093 -2.688 1.753 H9 A7Y 44
A7Y H10 H10 H 0 1 N N N N N N 18.478 8.095 15.220 5.339 -4.985 2.036 H10 A7Y 45
A7Y H11 H11 H 0 1 N N N N N N 20.241 9.828 15.398 3.157 -5.713 1.168 H11 A7Y 46
A7Y H12 H12 H 0 1 N N N N N N 24.541 7.066 9.982 -4.647 -1.931 1.375 H12 A7Y 47
A7Y H13 H13 H 0 1 N N N N N N 26.224 7.508 10.428 -5.141 -2.322 -0.290 H13 A7Y 48
A7Y H14 H14 H 0 1 N N N N N N 23.905 10.516 9.490 -2.814 -2.912 0.011 H14 A7Y 49
A7Y H15 H15 H 0 1 N N N N N N 22.988 8.975 9.598 -1.905 -1.689 0.944 H15 A7Y 50
A7Y H16 H16 H 0 1 N N N N N N 21.908 9.617 11.501 -1.411 -2.583 -1.769 H16 A7Y 51
A7Y H17 H17 H 0 1 N N N N N N 24.386 10.985 12.667 -1.768 0.416 -1.793 H17 A7Y 52
A7Y H18 H18 H 0 1 N N N N N N 23.160 9.961 13.489 -2.088 -0.775 -3.094 H18 A7Y 53
A7Y H19 H19 H 0 1 N N N N N N 23.942 7.936 12.364 -4.176 0.299 -1.752 H19 A7Y 54
A7Y H20 H20 H 0 1 N N N N N N 25.473 8.795 12.744 -4.179 -1.458 -2.105 H20 A7Y 55
A7Y H21 H21 H 0 1 N N N N N N 24.269 12.408 11.176 0.182 0.847 -0.643 H21 A7Y 56
A7Y H22 H22 H 0 1 N N N N N N 23.192 13.232 9.999 -1.006 0.242 0.537 H22 A7Y 57
A7Y H23 H23 H 0 1 N N N N N N 22.972 13.504 11.761 0.729 -0.079 0.775 H23 A7Y 58
A7Y H24 H24 H 0 1 N N N N N N 24.082 8.375 5.452 -7.131 1.858 2.550 H24 A7Y 59
A7Y H25 H25 H 0 1 N N N N N N 19.555 10.993 8.788 2.078 0.502 -1.075 H25 A7Y 60
A7Y H26 H26 H 0 1 N N N N N N 27.549 9.020 8.933 -6.576 -0.821 -1.546 H26 A7Y 61
A7Y H27 H27 H 0 1 N N N N N N 20.936 11.095 13.394 1.694 -4.147 0.006 H27 A7Y 62
A7Y H28 H28 H 0 1 N N N N N N 23.637 7.680 7.781 -5.394 0.116 2.443 H28 A7Y 63
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A7Y C52 O51 SING N N 1
A7Y CL1 C2 SING N N 2
A7Y O51 C44 SING N N 3
A7Y C2 C10 DOUB Y N 4
A7Y C2 C3 SING Y N 5
A7Y C45 C44 DOUB Y N 6
A7Y C45 C47 SING Y N 7
A7Y C44 C42 SING Y N 8
A7Y C10 C8 SING Y N 9
A7Y C3 C5 DOUB Y N 10
A7Y C47 C49 DOUB Y N 11
A7Y C42 C41 DOUB Y N 12
A7Y C8 C7 DOUB Y N 13
A7Y C5 C7 SING Y N 14
A7Y C49 C41 SING Y N 15
A7Y C41 C38 SING N N 16
A7Y C7 C12 SING N N 17
A7Y C38 C39 DOUB Y N 18
A7Y C38 N37 SING Y N 19
A7Y C39 C34 SING Y N 20
A7Y C12 N15 SING N N 21
A7Y C16 N15 SING N N 22
A7Y C16 C19 SING N N 23
A7Y O33 C32 DOUB N N 24
A7Y N15 C24 SING N N 25
A7Y N37 C36 DOUB Y N 26
A7Y C32 C34 SING N N 27
A7Y C32 N27 SING N N 28
A7Y C34 C35 DOUB Y N 29
A7Y C28 N27 SING N N 30
A7Y N27 C19 SING N N 31
A7Y C19 C21 SING N N 32
A7Y C36 C35 SING Y N 33
A7Y C36 C56 SING Y N 34
A7Y C35 C62 SING Y N 35
A7Y C24 C21 SING N N 36
A7Y C56 C58 DOUB Y N 37
A7Y C62 C60 DOUB Y N 38
A7Y C58 C60 SING Y N 39
A7Y C3 H1 SING N N 40
A7Y C42 H2 SING N N 41
A7Y C45 H3 SING N N 42
A7Y C47 H4 SING N N 43
A7Y C49 H5 SING N N 44
A7Y C52 H6 SING N N 45
A7Y C52 H7 SING N N 46
A7Y C52 H8 SING N N 47
A7Y C56 H9 SING N N 48
A7Y C58 H10 SING N N 49
A7Y C60 H11 SING N N 50
A7Y C12 H12 SING N N 51
A7Y C12 H13 SING N N 52
A7Y C16 H14 SING N N 53
A7Y C16 H15 SING N N 54
A7Y C19 H16 SING N N 55
A7Y C21 H17 SING N N 56
A7Y C21 H18 SING N N 57
A7Y C24 H19 SING N N 58
A7Y C24 H20 SING N N 59
A7Y C28 H21 SING N N 60
A7Y C28 H22 SING N N 61
A7Y C28 H23 SING N N 62
A7Y C10 H24 SING N N 63
A7Y C39 H25 SING N N 64
A7Y C5 H26 SING N N 65
A7Y C62 H27 SING N N 66
A7Y C8 H28 SING N N 67
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A7Y SMILES ACDLabs 12.01 c5(ccc(CN1CC(CC1)N(C)C(c4c2ccccc2nc(c3cc(ccc3)OC)c4)=O)cc5)Cl
A7Y InChI InChI 1.03 InChI=1S/C29H28ClN3O2/c1-32(23-14-15-33(19-23)18-20-10-12-22(30)13-11-20)29(34)26-17-28(21-6-5-7-24(16-21)35-2)31-27-9-4-3-8-25(26)27/h3-13,16-17,23H,14-15,18-19H2,1-2H3/t23-/m1/s1
A7Y InChIKey InChI 1.03 UPCGOPZWVBKZPL-HSZRJFAPSA-N
A7Y SMILES_CANONICAL CACTVS 3.385 COc1cccc(c1)c2cc(C(=O)N(C)[C@@H]3CCN(C3)Cc4ccc(Cl)cc4)c5ccccc5n2
A7Y SMILES CACTVS 3.385 COc1cccc(c1)c2cc(C(=O)N(C)[CH]3CCN(C3)Cc4ccc(Cl)cc4)c5ccccc5n2
A7Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CN([C@@H]1CCN(C1)Cc2ccc(cc2)Cl)C(=O)c3cc(nc4c3cccc4)c5cccc(c5)OC
A7Y SMILES "OpenEye OEToolkits" 2.0.6 CN(C1CCN(C1)Cc2ccc(cc2)Cl)C(=O)c3cc(nc4c3cccc4)c5cccc(c5)OC
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A7Y "SYSTEMATIC NAME" ACDLabs 12.01 N-{(3R)-1-[(4-chlorophenyl)methyl]pyrrolidin-3-yl}-2-(3-methoxyphenyl)-N-methylquinoline-4-carboxamide
A7Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ~{N}-[(3~{R})-1-[(4-chlorophenyl)methyl]pyrrolidin-3-yl]-2-(3-methoxyphenyl)-~{N}-methyl-quinoline-4-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A7Y 'Create component' 2017-07-10 RCSB
A7Y 'Initial release' 2017-08-16 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
A7Y C2 C 8.099 7.631 1
A7Y C3 C 9.591 7.474 2
A7Y C41 C 9.597 -6.752 3
A7Y C42 C 10.896 -6.002 4
A7Y C44 C 12.195 -6.752 5
A7Y C45 C 12.195 -8.252 6
A7Y C47 C 10.896 -9.002 7
A7Y C49 C 9.597 -8.252 8
A7Y C52 C 14.793 -6.752 9
A7Y C56 C 4.359 -6.804 10
A7Y C58 C 3.000 -6.033 11
A7Y C60 C 3.000 -4.470 12
A7Y C12 C 9.930 3.520 13
A7Y C16 C 9.512 0.880 14
A7Y C19 C 8.298 -0.002 15
A7Y C21 C 7.085 0.880 16
A7Y C24 C 7.548 2.307 17
A7Y C28 C 9.597 -2.252 18
A7Y C10 C 7.218 6.418 19
A7Y C32 C 6.999 -2.252 20
A7Y C34 C 6.999 -3.752 21
A7Y C35 C 5.700 -4.502 22
A7Y C36 C 5.700 -6.002 23
A7Y C38 C 8.298 -6.002 24
A7Y C39 C 8.298 -4.502 25
A7Y C5 C 10.201 6.104 26
A7Y C62 C 4.359 -3.700 27
A7Y C7 C 9.320 4.891 28
A7Y C8 C 7.828 5.047 29
A7Y N15 N 9.048 2.307 30
A7Y N27 N 8.298 -1.502 31
A7Y N37 N 6.999 -6.752 32
A7Y O33 O 5.700 -1.502 33
A7Y O51 O 13.494 -6.002 34
A7Y CL1 Cl 7.489 9.002 35
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
A7Y C52 O51 SINGLE NONE 1
A7Y CL1 C2 SINGLE NONE 2
A7Y O51 C44 SINGLE NONE 3
A7Y C2 C10 DOUBLE NONE 4
A7Y C2 C3 SINGLE NONE 5
A7Y C45 C44 SINGLE NONE 6
A7Y C45 C47 DOUBLE NONE 7
A7Y C44 C42 DOUBLE NONE 8
A7Y C10 C8 SINGLE NONE 9
A7Y C3 C5 DOUBLE NONE 10
A7Y C47 C49 SINGLE NONE 11
A7Y C42 C41 SINGLE NONE 12
A7Y C8 C7 DOUBLE NONE 13
A7Y C5 C7 SINGLE NONE 14
A7Y C49 C41 DOUBLE NONE 15
A7Y C41 C38 SINGLE NONE 16
A7Y C7 C12 SINGLE NONE 17
A7Y C38 C39 SINGLE NONE 18
A7Y C38 N37 DOUBLE NONE 19
A7Y C39 C34 DOUBLE NONE 20
A7Y C12 N15 SINGLE NONE 21
A7Y C16 N15 SINGLE NONE 22
A7Y C16 C19 SINGLE NONE 23
A7Y O33 C32 DOUBLE NONE 24
A7Y N15 C24 SINGLE NONE 25
A7Y N37 C36 SINGLE NONE 26
A7Y C32 C34 SINGLE NONE 27
A7Y C32 N27 SINGLE NONE 28
A7Y C34 C35 SINGLE NONE 29
A7Y C28 N27 SINGLE NONE 30
A7Y C19 N27 SINGLE BEGINDASH 31
A7Y C19 C21 SINGLE NONE 32
A7Y C36 C35 SINGLE NONE 33
A7Y C36 C56 DOUBLE NONE 34
A7Y C35 C62 DOUBLE NONE 35
A7Y C24 C21 SINGLE NONE 36
A7Y C56 C58 SINGLE NONE 37
A7Y C62 C60 SINGLE NONE 38
A7Y C58 C60 DOUBLE NONE 39
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
A7Y MurckoScaffold S1 scaffold 'O=C(N[C@@H]1CCN(Cc2ccccc2)C1)c1cc(-c2ccccc2)nc2ccccc12' InChI=1S/C27H25N3O/c31-27(28-22-15-16-30(19-22)18-20-9-3-1-4-10-20)24-17-26(21-11-5-2-6-12-21)29-25-14-8-7-13-23(24)25/h1-14,17,22H,15-16,18-19H2,(H,28,31)/t22-/m1/s1 IBUZAYFAPZKOAS-JOCHJYFZSA-N
A7Y amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
A7Y phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
A7Y pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
A7Y quinoline F4 fragment c1ccc2ncccc2c1 InChI=1S/C9H7N/c1-2-6-9-8(4-1)5-3-7-10-9/h1-7H SMWDFEZZVXVKRB-UHFFFAOYSA-N
A7Y Z33546322 F5 fragment Cc1cc(C(N)=O)c2ccccc2n1 InChI=1S/C11H10N2O/c1-7-6-9(11(12)14)8-4-2-3-5-10(8)13-7/h2-6H,1H3,(H2,12,14) GPTOAZYKFYMYMW-UHFFFAOYSA-N
A7Y Z2856434786 F6 fragment CNCc1ccncc1.Cl 'InChI=1S/C7H10N2.ClH/c1-8-6-7-2-4-9-5-3-7;/h2-5,8H,6H2,1H3;1H' CGWCAONYMGWAKJ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
A7Y C2 S1 1
A7Y C3 S1 1
A7Y C41 S1 1
A7Y C42 S1 1
A7Y C44 S1 1
A7Y C45 S1 1
A7Y C47 S1 1
A7Y C49 S1 1
A7Y C56 S1 1
A7Y C58 S1 1
A7Y C60 S1 1
A7Y C12 S1 1
A7Y C16 S1 1
A7Y C19 S1 1
A7Y C21 S1 1
A7Y C24 S1 1
A7Y C10 S1 1
A7Y C32 S1 1
A7Y C34 S1 1
A7Y C35 S1 1
A7Y C36 S1 1
A7Y C38 S1 1
A7Y C39 S1 1
A7Y C5 S1 1
A7Y C62 S1 1
A7Y C7 S1 1
A7Y C8 S1 1
A7Y N15 S1 1
A7Y N27 S1 1
A7Y N37 S1 1
A7Y O33 S1 1
A7Y N27 F1 1
A7Y C32 F1 1
A7Y O33 F1 1
A7Y C34 F1 1
A7Y C2 F2 1
A7Y C10 F2 1
A7Y C8 F2 1
A7Y C7 F2 1
A7Y C5 F2 1
A7Y C3 F2 1
A7Y C41 F2 2
A7Y C42 F2 2
A7Y C44 F2 2
A7Y C45 F2 2
A7Y C47 F2 2
A7Y C49 F2 2
A7Y C56 F2 3
A7Y C36 F2 3
A7Y C35 F2 3
A7Y C62 F2 3
A7Y C60 F2 3
A7Y C58 F2 3
A7Y C36 F3 1
A7Y C35 F3 1
A7Y C34 F3 1
A7Y C39 F3 1
A7Y C38 F3 1
A7Y N37 F3 1
A7Y C60 F4 1
A7Y C62 F4 1
A7Y C35 F4 1
A7Y C36 F4 1
A7Y C56 F4 1
A7Y C58 F4 1
A7Y N37 F4 1
A7Y C38 F4 1
A7Y C39 F4 1
A7Y C34 F4 1
A7Y C41 F5 1
A7Y C38 F5 1
A7Y C39 F5 1
A7Y C34 F5 1
A7Y C32 F5 1
A7Y O33 F5 1
A7Y N27 F5 1
A7Y C35 F5 1
A7Y C62 F5 1
A7Y C60 F5 1
A7Y C58 F5 1
A7Y C56 F5 1
A7Y C36 F5 1
A7Y N37 F5 1
A7Y CL1 F6 1
A7Y C19 F6 1
A7Y N27 F6 1
A7Y C32 F6 1
A7Y C34 F6 1
A7Y C39 F6 1
A7Y C38 F6 1
A7Y N37 F6 1
A7Y C36 F6 1
A7Y C35 F6 1
A7Y CL1 F6 2
A7Y C28 F6 2
A7Y N27 F6 2
A7Y C32 F6 2
A7Y C34 F6 2
A7Y C39 F6 2
A7Y C38 F6 2
A7Y N37 F6 2
A7Y C36 F6 2
A7Y C35 F6 2
#
_pdbe_chem_comp_rdkit_properties.comp_id A7Y
_pdbe_chem_comp_rdkit_properties.exactmw 485.187
_pdbe_chem_comp_rdkit_properties.amw 486.015
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 35
_pdbe_chem_comp_rdkit_properties.NumAtoms 63
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.241
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 249.798
_pdbe_chem_comp_rdkit_properties.tpsa 45.670
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.530
_pdbe_chem_comp_rdkit_properties.CrippenMR 136.288
_pdbe_chem_comp_rdkit_properties.chi0v 17.792
_pdbe_chem_comp_rdkit_properties.chi1v 9.718
_pdbe_chem_comp_rdkit_properties.chi2v 4.477
_pdbe_chem_comp_rdkit_properties.chi3v 4.477
_pdbe_chem_comp_rdkit_properties.chi4v 2.871
_pdbe_chem_comp_rdkit_properties.chi0n 45.036
_pdbe_chem_comp_rdkit_properties.chi1n 23.340
_pdbe_chem_comp_rdkit_properties.chi2n 4.288
_pdbe_chem_comp_rdkit_properties.chi3n 4.288
_pdbe_chem_comp_rdkit_properties.chi4n 2.777
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.410
_pdbe_chem_comp_rdkit_properties.kappa1 7.310
_pdbe_chem_comp_rdkit_properties.kappa2 10.063
_pdbe_chem_comp_rdkit_properties.kappa3 5.018
_pdbe_chem_comp_rdkit_properties.Phi 2.102
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
A7Y UniChem ChEMBL CHEMBL4083340
A7Y UniChem PDBe A7Y
A7Y UniChem PubChem 129318961
A7Y UniChem BindingDb 50258568
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
A7Y C2 -7.964 2.479 -1.254 ETKDGv3 1
A7Y C3 -6.709 2.883 -1.920 ETKDGv3 2
A7Y C41 4.671 -0.035 -0.411 ETKDGv3 3
A7Y C42 4.266 1.339 -0.815 ETKDGv3 4
A7Y C44 5.151 2.347 -0.816 ETKDGv3 5
A7Y C45 6.556 2.082 -0.408 ETKDGv3 6
A7Y C47 6.932 0.848 -0.058 ETKDGv3 7
A7Y C49 5.954 -0.257 -0.063 ETKDGv3 8
A7Y C52 5.560 4.767 -1.255 ETKDGv3 9
A7Y C56 3.671 -4.714 -0.910 ETKDGv3 10
A7Y C58 2.745 -5.864 -0.904 ETKDGv3 11
A7Y C60 1.445 -5.676 -0.645 ETKDGv3 12
A7Y C12 -4.151 1.882 0.718 ETKDGv3 13
A7Y C16 -1.928 0.943 0.410 ETKDGv3 14
A7Y C19 -1.786 -0.157 1.465 ETKDGv3 15
A7Y C21 -2.995 -1.066 1.277 ETKDGv3 16
A7Y C24 -3.777 -0.455 0.122 ETKDGv3 17
A7Y C28 0.342 -1.015 2.555 ETKDGv3 18
A7Y C10 -7.926 1.928 -0.033 ETKDGv3 19
A7Y C32 -0.085 -1.532 0.133 ETKDGv3 20
A7Y C34 1.334 -1.868 -0.116 ETKDGv3 21
A7Y C35 1.766 -3.262 -0.393 ETKDGv3 22
A7Y C36 3.207 -3.481 -0.665 ETKDGv3 23
A7Y C38 3.687 -1.146 -0.407 ETKDGv3 24
A7Y C39 2.248 -0.882 -0.125 ETKDGv3 25
A7Y C5 -5.534 2.700 -1.306 ETKDGv3 26
A7Y C62 0.930 -4.317 -0.371 ETKDGv3 27
A7Y C7 -5.483 2.089 0.046 ETKDGv3 28
A7Y C8 -6.630 1.724 0.647 ETKDGv3 29
A7Y N15 -3.322 0.934 -0.059 ETKDGv3 30
A7Y N27 -0.503 -0.886 1.360 ETKDGv3 31
A7Y N37 4.096 -2.361 -0.648 ETKDGv3 32
A7Y O33 -0.930 -1.807 -0.761 ETKDGv3 33
A7Y O51 4.718 3.620 -1.210 ETKDGv3 34
A7Y CL1 -9.500 2.722 -2.066 ETKDGv3 35
A7Y H1 -6.739 3.329 -2.907 ETKDGv3 36
A7Y H2 3.253 1.534 -1.142 ETKDGv3 37
A7Y H3 7.289 2.877 -0.395 ETKDGv3 38
A7Y H4 7.956 0.655 0.235 ETKDGv3 39
A7Y H5 6.287 -1.243 0.237 ETKDGv3 40
A7Y H6 6.394 4.600 -1.968 ETKDGv3 41
A7Y H7 5.960 4.986 -0.242 ETKDGv3 42
A7Y H8 4.967 5.639 -1.599 ETKDGv3 43
A7Y H9 4.724 -4.875 -1.107 ETKDGv3 44
A7Y H10 3.121 -6.859 -1.103 ETKDGv3 45
A7Y H11 0.767 -6.520 -0.635 ETKDGv3 46
A7Y H12 -4.271 1.537 1.771 ETKDGv3 47
A7Y H13 -3.658 2.878 0.757 ETKDGv3 48
A7Y H14 -1.270 0.758 -0.464 ETKDGv3 49
A7Y H15 -1.616 1.928 0.826 ETKDGv3 50
A7Y H16 -1.878 0.331 2.462 ETKDGv3 51
A7Y H17 -2.719 -2.120 1.061 ETKDGv3 52
A7Y H18 -3.621 -1.056 2.197 ETKDGv3 53
A7Y H19 -4.873 -0.533 0.300 ETKDGv3 54
A7Y H20 -3.559 -1.020 -0.810 ETKDGv3 55
A7Y H21 -0.187 -0.684 3.472 ETKDGv3 56
A7Y H22 0.630 -2.078 2.700 ETKDGv3 57
A7Y H23 1.257 -0.399 2.442 ETKDGv3 58
A7Y H24 -8.841 1.628 0.462 ETKDGv3 59
A7Y H25 1.929 0.131 0.086 ETKDGv3 60
A7Y H26 -4.617 2.998 -1.800 ETKDGv3 61
A7Y H27 -0.122 -4.201 -0.147 ETKDGv3 62
A7Y H28 -6.621 1.272 1.632 ETKDGv3 63
#