data_A9O
#
_chem_comp.id A9O
_chem_comp.name 5-ETHYL-3-METHYL-4-PHENYL-1,2-OXAZOLE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H13 N O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-11-26
_chem_comp.pdbx_modified_date 2014-09-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 187.238
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A9O
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4A9O
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A9O C5 C5 C 0 1 N N N N N N 0.068 10.391 22.215 0.874 2.895 -0.121 C5 A9O 1
A9O C4 C4 C 0 1 Y N N N N N -0.031 8.920 22.457 1.397 1.489 0.026 C4 A9O 2
A9O N N N 0 1 Y N N N N N -0.757 8.493 23.455 2.643 1.125 0.107 N A9O 3
A9O O O O 0 1 Y N N N N N -0.661 7.070 23.423 2.756 -0.073 0.220 O A9O 4
A9O C6 C6 C 0 1 Y N N N N N 0.553 7.849 21.752 0.626 0.296 0.110 C6 A9O 5
A9O C3 C3 C 0 1 Y N N N N N 0.137 6.732 22.391 1.566 -0.688 0.230 C3 A9O 6
A9O C2 C2 C 0 1 N N N N N N 0.366 5.272 22.192 1.314 -2.169 0.355 C2 A9O 7
A9O C1 C1 C 0 1 N N N N N N -0.405 4.402 23.154 1.285 -2.800 -1.038 C1 A9O 8
A9O C7 C7 C 0 1 Y N N N N N 1.445 7.902 20.556 -0.851 0.154 0.074 C7 A9O 9
A9O C12 C12 C 0 1 Y N N N N N 2.690 7.275 20.565 -1.558 0.491 -1.078 C12 A9O 10
A9O C11 C11 C 0 1 Y N N N N N 3.451 7.181 19.399 -2.931 0.357 -1.106 C11 A9O 11
A9O C10 C10 C 0 1 Y N N N N N 2.968 7.717 18.209 -3.606 -0.111 0.007 C10 A9O 12
A9O C9 C9 C 0 1 Y N N N N N 1.727 8.346 18.192 -2.909 -0.447 1.154 C9 A9O 13
A9O C8 C8 C 0 1 Y N N N N N 0.968 8.438 19.359 -1.535 -0.323 1.191 C8 A9O 14
A9O H51C H51C H 0 0 N N N N N N -0.528 10.928 22.968 0.787 3.141 -1.179 H51C A9O 15
A9O H52C H52C H 0 0 N N N N N N 1.120 10.705 22.288 -0.105 2.969 0.352 H52C A9O 16
A9O H53C H53C H 0 0 N N N N N N -0.315 10.624 21.210 1.563 3.590 0.359 H53C A9O 17
A9O H21C H21C H 0 0 N N N N N N 0.064 5.009 21.167 2.111 -2.625 0.944 H21C A9O 18
A9O H22C H22C H 0 0 N N N N N N 1.439 5.068 22.322 0.357 -2.334 0.849 H22C A9O 19
A9O H11C H11C H 0 0 N N N N N N -0.187 3.344 22.948 2.242 -2.635 -1.533 H11C A9O 20
A9O H12C H12C H 0 0 N N N N N N -0.108 4.643 24.185 1.103 -3.871 -0.948 H12C A9O 21
A9O H13C H13C H 0 0 N N N N N N -1.483 4.585 23.031 0.488 -2.345 -1.627 H13C A9O 22
A9O H12 H12 H 0 1 N N N N N N 3.070 6.857 21.485 -1.032 0.857 -1.947 H12 A9O 23
A9O H8 H8 H 0 1 N N N N N N 0.005 8.927 19.336 -0.992 -0.590 2.085 H8 A9O 24
A9O H11 H11 H 0 1 N N N N N N 4.414 6.693 19.420 -3.480 0.618 -1.999 H11 A9O 25
A9O H10 H10 H 0 1 N N N N N N 3.553 7.645 17.304 -4.681 -0.213 -0.019 H10 A9O 26
A9O H9 H9 H 0 1 N N N N N N 1.349 8.765 17.271 -3.441 -0.812 2.020 H9 A9O 27
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A9O C5 C4 SING N N 1
A9O C4 N DOUB Y N 2
A9O C4 C6 SING Y N 3
A9O N O SING Y N 4
A9O O C3 SING Y N 5
A9O C6 C3 DOUB Y N 6
A9O C6 C7 SING N N 7
A9O C3 C2 SING N N 8
A9O C2 C1 SING N N 9
A9O C7 C12 SING Y N 10
A9O C7 C8 DOUB Y N 11
A9O C12 C11 DOUB Y N 12
A9O C11 C10 SING Y N 13
A9O C10 C9 DOUB Y N 14
A9O C9 C8 SING Y N 15
A9O C5 H51C SING N N 16
A9O C5 H52C SING N N 17
A9O C5 H53C SING N N 18
A9O C2 H21C SING N N 19
A9O C2 H22C SING N N 20
A9O C1 H11C SING N N 21
A9O C1 H12C SING N N 22
A9O C1 H13C SING N N 23
A9O C12 H12 SING N N 24
A9O C8 H8 SING N N 25
A9O C11 H11 SING N N 26
A9O C10 H10 SING N N 27
A9O C9 H9 SING N N 28
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A9O SMILES ACDLabs 12.01 n2oc(c(c1ccccc1)c2C)CC
A9O InChI InChI 1.03 InChI=1S/C12H13NO/c1-3-11-12(9(2)13-14-11)10-7-5-4-6-8-10/h4-8H,3H2,1-2H3
A9O InChIKey InChI 1.03 RWCFZRPXMBQSOA-UHFFFAOYSA-N
A9O SMILES_CANONICAL CACTVS 3.385 CCc1onc(C)c1c2ccccc2
A9O SMILES CACTVS 3.385 CCc1onc(C)c1c2ccccc2
A9O SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 CCc1c(c(no1)C)c2ccccc2
A9O SMILES "OpenEye OEToolkits" 1.9.2 CCc1c(c(no1)C)c2ccccc2
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A9O "SYSTEMATIC NAME" ACDLabs 12.01 5-ethyl-3-methyl-4-phenyl-1,2-oxazole
A9O "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 5-ethyl-3-methyl-4-phenyl-1,2-oxazole
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A9O 'Create component' 2011-11-26 EBI
A9O 'Modify descriptor' 2014-09-05 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
A9O C5 C 9.395 1.514 1
A9O C4 C 7.968 1.978 2
A9O N N 7.505 3.404 3
A9O O O 6.005 3.404 4
A9O C6 C 6.755 1.096 5
A9O C3 C 5.541 1.978 6
A9O C2 C 4.115 1.514 7
A9O C1 C 3.000 2.518 8
A9O C7 C 6.755 -0.404 9
A9O C12 C 5.456 -1.154 10
A9O C11 C 5.456 -2.654 11
A9O C10 C 6.755 -3.404 12
A9O C9 C 8.054 -2.654 13
A9O C8 C 8.054 -1.154 14
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
A9O C5 C4 SINGLE NONE 1
A9O C4 N DOUBLE NONE 2
A9O C4 C6 SINGLE NONE 3
A9O N O SINGLE NONE 4
A9O O C3 SINGLE NONE 5
A9O C6 C3 DOUBLE NONE 6
A9O C6 C7 SINGLE NONE 7
A9O C3 C2 SINGLE NONE 8
A9O C2 C1 SINGLE NONE 9
A9O C7 C12 DOUBLE NONE 10
A9O C7 C8 SINGLE NONE 11
A9O C12 C11 SINGLE NONE 12
A9O C11 C10 DOUBLE NONE 13
A9O C10 C9 SINGLE NONE 14
A9O C9 C8 DOUBLE NONE 15
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
A9O MurckoScaffold S1 scaffold c1ccc(-c2cnoc2)cc1 InChI=1S/C9H7NO/c1-2-4-8(5-3-1)9-6-10-11-7-9/h1-7H KEVAZWIBJQZOHC-UHFFFAOYSA-N
A9O isoxazole F1 fragment c1cnoc1 InChI=1S/C3H3NO/c1-2-4-5-3-1/h1-3H CTAPFRYPJLPFDF-UHFFFAOYSA-N
A9O phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
A9O C4 S1 1
A9O N S1 1
A9O O S1 1
A9O C6 S1 1
A9O C3 S1 1
A9O C7 S1 1
A9O C12 S1 1
A9O C11 S1 1
A9O C10 S1 1
A9O C9 S1 1
A9O C8 S1 1
A9O C3 F1 1
A9O C6 F1 1
A9O C4 F1 1
A9O N F1 1
A9O O F1 1
A9O C7 F2 1
A9O C12 F2 1
A9O C11 F2 1
A9O C10 F2 1
A9O C9 F2 1
A9O C8 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id A9O
_pdbe_chem_comp_rdkit_properties.exactmw 187.100
_pdbe_chem_comp_rdkit_properties.amw 187.242
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 14
_pdbe_chem_comp_rdkit_properties.NumAtoms 27
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.250
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 101.813
_pdbe_chem_comp_rdkit_properties.tpsa 26.030
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.723
_pdbe_chem_comp_rdkit_properties.CrippenMR 54.200
_pdbe_chem_comp_rdkit_properties.chi0v 6.855
_pdbe_chem_comp_rdkit_properties.chi1v 3.610
_pdbe_chem_comp_rdkit_properties.chi2v 1.556
_pdbe_chem_comp_rdkit_properties.chi3v 1.556
_pdbe_chem_comp_rdkit_properties.chi4v 0.982
_pdbe_chem_comp_rdkit_properties.chi0n 19.855
_pdbe_chem_comp_rdkit_properties.chi1n 10.110
_pdbe_chem_comp_rdkit_properties.chi2n 1.556
_pdbe_chem_comp_rdkit_properties.chi3n 1.556
_pdbe_chem_comp_rdkit_properties.chi4n 0.982
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.570
_pdbe_chem_comp_rdkit_properties.kappa1 2.325
_pdbe_chem_comp_rdkit_properties.kappa2 3.661
_pdbe_chem_comp_rdkit_properties.kappa3 1.434
_pdbe_chem_comp_rdkit_properties.Phi 0.608
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
A9O UniChem PDBe A9O
A9O UniChem SureChEMBL SCHEMBL13981827
A9O UniChem PubChem 56596556
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
A9O C5 0.175 3.229 -0.130 ETKDGv3 1
A9O C4 -0.705 2.117 0.340 ETKDGv3 2
A9O N -1.868 2.314 0.867 ETKDGv3 3
A9O O -2.392 1.078 1.166 ETKDGv3 4
A9O C6 -0.421 0.679 0.261 ETKDGv3 5
A9O C3 -1.497 0.090 0.779 ETKDGv3 6
A9O C2 -1.737 -1.384 0.947 ETKDGv3 7
A9O C1 -3.223 -1.717 0.859 ETKDGv3 8
A9O C7 0.798 0.030 -0.266 ETKDGv3 9
A9O C12 1.309 0.400 -1.454 ETKDGv3 10
A9O C11 2.529 -0.250 -1.978 ETKDGv3 11
A9O C10 3.134 -1.211 -1.269 ETKDGv3 12
A9O C9 2.586 -1.618 0.040 ETKDGv3 13
A9O C8 1.482 -1.031 0.518 ETKDGv3 14
A9O H51C -0.061 4.163 0.421 ETKDGv3 15
A9O H52C 0.013 3.398 -1.215 ETKDGv3 16
A9O H53C 1.240 2.973 0.048 ETKDGv3 17
A9O H21C -1.349 -1.705 1.936 ETKDGv3 18
A9O H22C -1.204 -1.950 0.153 ETKDGv3 19
A9O H11C -3.781 -1.216 1.679 ETKDGv3 20
A9O H12C -3.364 -2.814 0.956 ETKDGv3 21
A9O H13C -3.634 -1.390 -0.120 ETKDGv3 22
A9O H12 0.826 1.162 -2.053 ETKDGv3 23
A9O H8 1.102 -1.323 1.488 ETKDGv3 24
A9O H11 2.929 0.051 -2.937 ETKDGv3 25
A9O H10 4.027 -1.688 -1.652 ETKDGv3 26
A9O H9 3.085 -2.387 0.616 ETKDGv3 27
#