data_ACO
#
_chem_comp.id ACO
_chem_comp.name 'ACETYL COENZYME *A'
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAC
_chem_comp.formula 'C23 H38 N7 O17 P3 S'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 809.571
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ACO
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4CSC
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ACO N1A AN1 N 0 1 Y N N N N N 19.454 -8.026 13.229 4.880 1.108 -10.650 N1A ACO 1
ACO C2A AC2 C 0 1 Y N N N N N 19.031 -8.723 14.335 3.865 1.949 -10.587 C2A ACO 2
ACO N3A AN3 N 0 1 Y N N N N N 18.216 -9.761 14.349 2.906 1.834 -9.692 N3A ACO 3
ACO C4A AC4 C 0 1 Y N N N N N 17.880 -10.166 13.105 2.922 0.844 -8.806 C4A ACO 4
ACO C5A AC5 C 0 1 Y N N N N N 18.255 -9.596 11.880 3.985 -0.074 -8.828 C5A ACO 5
ACO C6A AC6 C 0 1 Y N N N N N 19.131 -8.416 11.965 4.984 0.090 -9.802 C6A ACO 6
ACO N6A AN6 N 0 1 N N N N N N 19.609 -7.773 10.933 6.052 -0.786 -9.876 N6A ACO 7
ACO N7A AN7 N 0 1 Y N N N N N 17.746 -10.305 10.829 3.765 -0.963 -7.830 N7A ACO 8
ACO C8A AC8 C 0 1 Y N N N N N 17.077 -11.300 11.352 2.664 -0.653 -7.208 C8A ACO 9
ACO N9A AN9 N 0 1 Y N N N N N 17.092 -11.255 12.744 2.109 0.457 -7.771 N9A ACO 10
ACO C1B AC1* C 0 1 N N R N N N 16.126 -11.919 13.658 0.867 1.113 -7.352 C1B ACO 11
ACO C2B AC2* C 0 1 N N R N N N 14.706 -11.727 13.201 -0.359 0.446 -8.025 C2B ACO 12
ACO O2B AO2* O 0 1 N N N N N N 14.344 -10.393 13.602 -0.607 1.017 -9.312 O2B ACO 13
ACO C3B AC3* C 0 1 N N S N N N 14.087 -12.802 14.105 -1.502 0.796 -7.036 C3B ACO 14
ACO O3B AO3* O 0 1 N N N N N N 14.151 -12.386 15.441 -2.229 1.937 -7.496 O3B ACO 15
ACO P3B AP3* P 0 1 N N N N N N 12.752 -12.925 16.226 -3.762 1.474 -7.665 P3B ACO 16
ACO O7A AO7 O 0 1 N N N N N N 11.450 -12.417 15.444 -4.284 1.009 -6.361 O7A ACO 17
ACO O8A AO8 O 0 1 N N N N N N 12.674 -12.290 17.682 -4.644 2.717 -8.184 O8A ACO 18
ACO O9A AO9 O 0 1 N N N N N N 12.854 -14.510 16.260 -3.845 0.274 -8.736 O9A ACO 19
ACO C4B AC4* C 0 1 N N R N N N 15.029 -13.998 13.790 -0.771 1.110 -5.716 C4B ACO 20
ACO O4B AO4* O 0 1 N N N N N N 16.332 -13.345 13.539 0.633 0.905 -5.943 O4B ACO 21
ACO C5B AC5* C 0 1 N N N N N N 14.785 -14.905 12.590 -1.262 0.171 -4.613 C5B ACO 22
ACO O5B AO5* O 0 1 N N N N N N 14.345 -14.017 11.510 -0.574 0.464 -3.396 O5B ACO 23
ACO P1A AP1 P 0 1 N N S N N N 14.851 -14.286 10.004 -1.138 -0.555 -2.285 P1A ACO 24
ACO O1A AO1 O 0 1 N N N N N N 14.034 -15.422 9.445 -0.875 -1.947 -2.714 O1A ACO 25
ACO O2A AO2 O 0 1 N N N N N N 16.361 -14.371 9.930 -2.724 -0.337 -2.112 O2A ACO 26
ACO O3A AO3 O 0 1 N N N N N N 14.383 -13.014 9.225 -0.401 -0.279 -0.880 O3A ACO 27
ACO P2A AP2 P 0 1 N N S N N N 12.972 -12.627 8.484 -1.010 -1.329 0.178 P2A ACO 28
ACO O4A AO4 O 0 1 N N N N N N 12.853 -13.313 7.102 -2.470 -1.116 0.299 O4A ACO 29
ACO O5A AO5 O 0 1 N N N N N N 11.730 -12.862 9.384 -0.727 -2.830 -0.330 O5A ACO 30
ACO O6A AO6 O 0 1 N N N N N N 13.294 -11.033 8.301 -0.315 -1.108 1.613 O6A ACO 31
ACO CBP PC11 C 0 1 N N N N N N 14.722 -9.255 7.586 -0.273 -1.907 3.893 CBP ACO 32
ACO CCP PC12 C 0 1 N N N N N N 14.299 -10.695 7.342 -0.894 -2.063 2.504 CCP ACO 33
ACO CDP PC13 C 0 1 N N N N N N 15.399 -8.610 6.342 -0.542 -0.494 4.416 CDP ACO 34
ACO CEP PC14 C 0 1 N N N N N N 13.360 -8.579 7.900 1.236 -2.140 3.807 CEP ACO 35
ACO CAP PC10 C 0 1 N N R N N N 15.698 -9.274 8.810 -0.893 -2.929 4.847 CAP ACO 36
ACO OAP PO10 O 0 1 N N N N N N 16.876 -10.022 8.513 -0.744 -4.242 4.302 OAP ACO 37
ACO C9P PC9 C 0 1 N N N N N N 16.011 -7.871 9.428 -0.197 -2.858 6.182 C9P ACO 38
ACO O9P PO9 O 0 1 N N N N N N 15.199 -7.343 10.304 0.579 -3.730 6.508 O9P ACO 39
ACO N8P PN8 N 0 1 N N N N N N 17.157 -7.286 9.025 -0.438 -1.825 7.013 N8P ACO 40
ACO C7P PC7 C 0 1 N N N N N N 17.489 -5.881 9.314 0.252 -1.745 8.302 C7P ACO 41
ACO C6P PC6 C 0 1 N N N N N N 16.590 -4.936 8.485 -0.197 -0.486 9.046 C6P ACO 42
ACO C5P PC5 C 0 1 N N N N N N 17.099 -4.759 7.062 0.513 -0.404 10.372 C5P ACO 43
ACO O5P PO5 O 0 1 N N N N N N 18.326 -4.634 6.780 1.302 -1.268 10.691 O5P ACO 44
ACO N4P PN4 N 0 1 N N N N N N 16.168 -4.615 6.173 0.272 0.628 11.203 N4P ACO 45
ACO C3P PC3 C 0 1 N N N N N N 16.439 -4.543 4.699 0.963 0.708 12.492 C3P ACO 46
ACO C2P PC2 C 0 1 N N N N N N 16.572 -5.971 4.041 0.513 1.968 13.235 C2P ACO 47
ACO S1P PS1 S 0 1 N N N N N N 16.780 -5.770 2.235 1.367 2.066 14.828 S1P ACO 48
ACO C C C 0 1 N N N N N N 15.521 -4.551 1.818 0.700 3.522 15.434 C ACO 49
ACO O O O 0 1 N N N N N N 14.544 -4.705 2.505 -0.111 4.137 14.775 O ACO 50
ACO CH3 CH3 C 0 1 N N N N N N 15.740 -3.367 0.874 1.122 4.039 16.785 CH3 ACO 51
ACO H2A AH2 H 0 1 N N N N N N 19.388 -8.412 15.331 3.819 2.763 -11.296 H2A ACO 52
ACO H61A AH61 H 0 0 N N N N N N 19.367 -8.065 9.986 6.736 -0.662 -10.553 H61A ACO 53
ACO H62A AH62 H 0 0 N N N N N N 20.625 -7.751 11.011 6.117 -1.525 -9.251 H62A ACO 54
ACO H8A AH8 H 0 1 N N N N N N 16.580 -12.055 10.720 2.251 -1.195 -6.371 H8A ACO 55
ACO H1B AH1* H 0 1 N N N N N N 16.280 -11.498 14.679 0.900 2.177 -7.583 H1B ACO 56
ACO H2B AH2* H 0 1 N N N N N N 14.439 -11.818 12.122 -0.224 -0.632 -8.099 H2B ACO 57
ACO HO2A AHO2 H 0 0 N N N N N N 13.447 -10.271 13.313 0.177 0.844 -9.850 HO2A ACO 58
ACO H3B AH3* H 0 1 N N N N N N 13.009 -13.035 13.939 -2.170 -0.054 -6.908 H3B ACO 59
ACO HOA8 8HOA H 0 0 N N N N N N 11.888 -12.592 18.122 -5.552 2.398 -8.272 HOA8 ACO 60
ACO HOA9 9HOA H 0 0 N N N N N N 12.068 -14.812 16.700 -3.496 0.619 -9.569 HOA9 ACO 61
ACO H4B AH4* H 0 1 N N N N N N 14.898 -14.698 14.648 -0.952 2.146 -5.429 H4B ACO 62
ACO H51A AH51 H 0 0 N N N N N N 15.662 -15.537 12.320 -1.067 -0.861 -4.901 H51A ACO 63
ACO H52A AH52 H 0 0 N N N N N N 14.078 -15.742 12.797 -2.334 0.310 -4.468 H52A ACO 64
ACO HOA2 2HOA H 0 0 N N N N N N 16.659 -14.529 9.042 -2.851 0.579 -1.832 HOA2 ACO 65
ACO HOA5 5HOA H 0 0 N N N N N N 10.912 -12.637 8.954 0.232 -2.926 -0.395 HOA5 ACO 66
ACO H121 1H12 H 0 0 N N N N N N 15.159 -11.403 7.352 -0.702 -3.070 2.132 H121 ACO 67
ACO H122 2H12 H 0 0 N N N N N N 13.969 -10.874 6.292 -1.969 -1.897 2.565 H122 ACO 68
ACO H131 1H13 H 0 0 N N N N N N 15.709 -7.554 6.520 -1.609 -0.372 4.602 H131 ACO 69
ACO H132 2H13 H 0 0 N N N N N N 16.259 -9.225 5.990 0.008 -0.338 5.343 H132 ACO 70
ACO H133 3H13 H 0 0 N N N N N N 14.742 -8.687 5.443 -0.217 0.235 3.674 H133 ACO 71
ACO H141 1H14 H 0 0 N N N N N N 13.670 -7.523 8.078 1.427 -3.146 3.435 H141 ACO 72
ACO H142 2H14 H 0 0 N N N N N N 12.570 -8.717 7.124 1.677 -1.411 3.127 H142 ACO 73
ACO H143 3H14 H 0 0 N N N N N N 12.775 -9.048 8.725 1.678 -2.028 4.797 H143 ACO 74
ACO H10 H10 H 0 1 N N N N N N 15.147 -9.800 9.624 -1.953 -2.709 4.978 H10 ACO 75
ACO HO1 HO1 H 0 1 N N N N N N 17.468 -10.033 9.255 0.205 -4.396 4.202 HO1 ACO 76
ACO HN8 HN8 H 0 1 N N N N N N 17.773 -7.907 8.500 -1.070 -1.134 6.758 HN8 ACO 77
ACO H71 1H7 H 0 1 N N N N N N 17.433 -5.656 10.404 1.328 -1.703 8.135 H71 ACO 78
ACO H72 2H7 H 0 1 N N N N N N 18.572 -5.668 9.156 0.011 -2.625 8.899 H72 ACO 79
ACO H61 1H6 H 0 1 N N N N N N 15.528 -5.278 8.494 -1.274 -0.528 9.212 H61 ACO 80
ACO H62 2H6 H 0 1 N N N N N N 16.463 -3.951 8.993 0.043 0.393 8.449 H62 ACO 81
ACO HN4 HN4 H 0 1 N N N N N N 15.252 -4.560 6.618 -0.358 1.319 10.947 HN4 ACO 82
ACO H31 1H3 H 0 1 N N N N N N 15.666 -3.930 4.177 2.040 0.750 12.325 H31 ACO 83
ACO H32 2H3 H 0 1 N N N N N N 17.336 -3.917 4.485 0.722 -0.171 13.089 H32 ACO 84
ACO H21 1H2 H 0 1 N N N N N N 17.388 -6.576 4.499 -0.562 1.926 13.402 H21 ACO 85
ACO H22 2H2 H 0 1 N N N N N N 15.718 -6.640 4.299 0.754 2.847 12.638 H22 ACO 86
ACO HH31 1HH3 H 0 0 N N N N N N 14.960 -2.612 0.615 0.595 4.969 16.998 HH31 ACO 87
ACO HH32 2HH3 H 0 0 N N N N N N 16.621 -2.803 1.260 0.879 3.300 17.549 HH32 ACO 88
ACO HH33 3HH3 H 0 0 N N N N N N 16.117 -3.785 -0.088 2.196 4.221 16.785 HH33 ACO 89
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ACO N1A C2A SING Y N 1
ACO N1A C6A DOUB Y N 2
ACO C2A N3A DOUB Y N 3
ACO C2A H2A SING N N 4
ACO N3A C4A SING Y N 5
ACO C4A C5A DOUB Y N 6
ACO C4A N9A SING Y N 7
ACO C5A C6A SING Y N 8
ACO C5A N7A SING Y N 9
ACO C6A N6A SING N N 10
ACO N6A H61A SING N N 11
ACO N6A H62A SING N N 12
ACO N7A C8A DOUB Y N 13
ACO C8A N9A SING Y N 14
ACO C8A H8A SING N N 15
ACO N9A C1B SING N N 16
ACO C1B C2B SING N N 17
ACO C1B O4B SING N N 18
ACO C1B H1B SING N N 19
ACO C2B O2B SING N N 20
ACO C2B C3B SING N N 21
ACO C2B H2B SING N N 22
ACO O2B HO2A SING N N 23
ACO C3B O3B SING N N 24
ACO C3B C4B SING N N 25
ACO C3B H3B SING N N 26
ACO O3B P3B SING N N 27
ACO P3B O7A DOUB N N 28
ACO P3B O8A SING N N 29
ACO P3B O9A SING N N 30
ACO O8A HOA8 SING N N 31
ACO O9A HOA9 SING N N 32
ACO C4B O4B SING N N 33
ACO C4B C5B SING N N 34
ACO C4B H4B SING N N 35
ACO C5B O5B SING N N 36
ACO C5B H51A SING N N 37
ACO C5B H52A SING N N 38
ACO O5B P1A SING N N 39
ACO P1A O1A DOUB N N 40
ACO P1A O2A SING N N 41
ACO P1A O3A SING N N 42
ACO O2A HOA2 SING N N 43
ACO O3A P2A SING N N 44
ACO P2A O4A DOUB N N 45
ACO P2A O5A SING N N 46
ACO P2A O6A SING N N 47
ACO O5A HOA5 SING N N 48
ACO O6A CCP SING N N 49
ACO CBP CCP SING N N 50
ACO CBP CDP SING N N 51
ACO CBP CEP SING N N 52
ACO CBP CAP SING N N 53
ACO CCP H121 SING N N 54
ACO CCP H122 SING N N 55
ACO CDP H131 SING N N 56
ACO CDP H132 SING N N 57
ACO CDP H133 SING N N 58
ACO CEP H141 SING N N 59
ACO CEP H142 SING N N 60
ACO CEP H143 SING N N 61
ACO CAP OAP SING N N 62
ACO CAP C9P SING N N 63
ACO CAP H10 SING N N 64
ACO OAP HO1 SING N N 65
ACO C9P O9P DOUB N N 66
ACO C9P N8P SING N N 67
ACO N8P C7P SING N N 68
ACO N8P HN8 SING N N 69
ACO C7P C6P SING N N 70
ACO C7P H71 SING N N 71
ACO C7P H72 SING N N 72
ACO C6P C5P SING N N 73
ACO C6P H61 SING N N 74
ACO C6P H62 SING N N 75
ACO C5P O5P DOUB N N 76
ACO C5P N4P SING N N 77
ACO N4P C3P SING N N 78
ACO N4P HN4 SING N N 79
ACO C3P C2P SING N N 80
ACO C3P H31 SING N N 81
ACO C3P H32 SING N N 82
ACO C2P S1P SING N N 83
ACO C2P H21 SING N N 84
ACO C2P H22 SING N N 85
ACO S1P C SING N N 86
ACO C O DOUB N N 87
ACO C CH3 SING N N 88
ACO CH3 HH31 SING N N 89
ACO CH3 HH32 SING N N 90
ACO CH3 HH33 SING N N 91
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ACO SMILES ACDLabs 10.04 'O=C(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O)C'
ACO SMILES_CANONICAL CACTVS 3.341 'CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P@@](O)(=O)O[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23'
ACO SMILES CACTVS 3.341 'CC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23'
ACO SMILES_CANONICAL 'OpenEye OEToolkits' 1.5.0 'CC(=O)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O'
ACO SMILES 'OpenEye OEToolkits' 1.5.0 'CC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O'
ACO InChI InChI 1.03 'InChI=1S/C23H38N7O17P3S/c1-12(31)51-7-6-25-14(32)4-5-26-21(35)18(34)23(2,3)9-44-50(41,42)47-49(39,40)43-8-13-17(46-48(36,37)38)16(33)22(45-13)30-11-29-15-19(24)27-10-28-20(15)30/h10-11,13,16-18,22,33-34H,4-9H2,1-3H3,(H,25,32)(H,26,35)(H,39,40)(H,41,42)(H2,24,27,28)(H2,36,37,38)/t13-,16-,17-,18+,22-/m1/s1'
ACO InChIKey InChI 1.03 ZSLZBFCDCINBPY-ZSJPKINUSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ACO 'SYSTEMATIC NAME' ACDLabs 10.04 'S-{(9R,13S,15S)-17-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-9,13,15-trihydroxy-10,10-dimethyl-13,15-dioxido-4,8-dioxo-12,14,16-trioxa-3,7-diaza-13,15-diphosphaheptadec-1-yl} ethanethioate (non-preferred name)'
ACO 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 1.5.0 'S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-2-hydroxy-3,3-dimethyl-butanoyl]amino]propanoylamino]ethyl] ethanethioate'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ACO 'Create component' 1999-07-08 EBI
ACO 'Modify descriptor' 2011-06-04 RCSB
ACO 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id ACO
_pdbx_chem_comp_pcm.modified_residue_id ARG
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom OAP
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom NH1
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
_pdbx_chem_comp_pcm.first_instance_model_db_code 2GE3
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ACO N1A N 18.334 -10.256 1
ACO C2A C 18.334 -8.756 2
ACO N3A N 19.633 -8.006 3
ACO C4A C 20.932 -8.756 4
ACO C5A C 20.932 -10.256 5
ACO C6A C 19.633 -11.006 6
ACO N6A N 19.633 -12.506 7
ACO N7A N 22.352 -10.713 8
ACO C8A C 23.227 -9.506 9
ACO N9A N 22.352 -8.299 10
ACO C1B C 22.818 -6.874 11
ACO C2B C 24.245 -6.412 12
ACO O2B O 25.457 -7.296 13
ACO C3B C 24.248 -4.912 14
ACO O3B O 25.463 -4.033 15
ACO P3B P 25.309 -2.541 16
ACO O7A O 25.154 -1.049 17
ACO O8A O 26.801 -2.387 18
ACO O9A O 23.817 -2.695 19
ACO C4B C 22.822 -4.447 20
ACO O4B O 21.938 -5.659 21
ACO C5B C 22.361 -3.019 22
ACO O5B O 20.894 -2.705 23
ACO P1A P 20.433 -1.277 24
ACO O1A O 19.006 -1.738 25
ACO O2A O 21.860 -0.816 26
ACO O3A O 19.972 0.150 27
ACO P2A P 18.505 0.464 28
ACO O4A O 18.820 1.931 29
ACO O5A O 18.191 -1.002 30
ACO O6A O 17.039 0.779 31
ACO CBP C 15.111 2.521 32
ACO CCP C 16.578 2.206 33
ACO CDP C 15.425 3.987 34
ACO CEP C 14.797 1.054 35
ACO CAP C 13.644 2.835 36
ACO OAP O 12.639 1.722 37
ACO C9P C 13.183 4.262 38
ACO O9P O 14.189 5.375 39
ACO N8P N 11.716 4.577 40
ACO C7P C 11.255 6.004 41
ACO C6P C 9.789 6.319 42
ACO C5P C 9.328 7.746 43
ACO O5P O 10.333 8.859 44
ACO N4P N 7.861 8.060 45
ACO C3P C 7.400 9.488 46
ACO C2P C 5.933 9.802 47
ACO S1P S 5.472 11.230 48
ACO C C 4.006 11.544 49
ACO O O 3.000 10.431 50
ACO CH3 C 3.545 12.971 51
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ACO N1A C2A DOUBLE NONE 1
ACO N1A C6A SINGLE NONE 2
ACO C2A N3A SINGLE NONE 3
ACO N3A C4A DOUBLE NONE 4
ACO C4A C5A SINGLE NONE 5
ACO C4A N9A SINGLE NONE 6
ACO C5A C6A DOUBLE NONE 7
ACO C5A N7A SINGLE NONE 8
ACO C6A N6A SINGLE NONE 9
ACO N7A C8A DOUBLE NONE 10
ACO C8A N9A SINGLE NONE 11
ACO C1B N9A SINGLE BEGINDASH 12
ACO C1B C2B SINGLE NONE 13
ACO C1B O4B SINGLE NONE 14
ACO C2B O2B SINGLE BEGINWEDGE 15
ACO C2B C3B SINGLE NONE 16
ACO C3B O3B SINGLE BEGINWEDGE 17
ACO C3B C4B SINGLE NONE 18
ACO O3B P3B SINGLE NONE 19
ACO P3B O7A DOUBLE NONE 20
ACO P3B O8A SINGLE NONE 21
ACO P3B O9A SINGLE NONE 22
ACO C4B O4B SINGLE NONE 23
ACO C4B C5B SINGLE BEGINDASH 24
ACO C5B O5B SINGLE NONE 25
ACO O5B P1A SINGLE NONE 26
ACO P1A O1A DOUBLE NONE 27
ACO P1A O2A SINGLE BEGINDASH 28
ACO P1A O3A SINGLE NONE 29
ACO O3A P2A SINGLE NONE 30
ACO P2A O4A DOUBLE NONE 31
ACO P2A O5A SINGLE BEGINDASH 32
ACO P2A O6A SINGLE NONE 33
ACO O6A CCP SINGLE NONE 34
ACO CBP CCP SINGLE NONE 35
ACO CBP CDP SINGLE NONE 36
ACO CBP CEP SINGLE NONE 37
ACO CBP CAP SINGLE NONE 38
ACO CAP OAP SINGLE BEGINWEDGE 39
ACO CAP C9P SINGLE NONE 40
ACO C9P O9P DOUBLE NONE 41
ACO C9P N8P SINGLE NONE 42
ACO N8P C7P SINGLE NONE 43
ACO C7P C6P SINGLE NONE 44
ACO C6P C5P SINGLE NONE 45
ACO C5P O5P DOUBLE NONE 46
ACO C5P N4P SINGLE NONE 47
ACO N4P C3P SINGLE NONE 48
ACO C3P C2P SINGLE NONE 49
ACO C2P S1P SINGLE NONE 50
ACO S1P C SINGLE NONE 51
ACO C O DOUBLE NONE 52
ACO C CH3 SINGLE NONE 53
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ACO MurckoScaffold S1 scaffold 'c1ncc2ncn([C@H]3CCCO3)c2n1' InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1 DAKONNSVCLKUJN-MRVPVSSYSA-N
ACO adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
ACO amide F2 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
ACO imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
ACO phosphate F4 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
ACO purine F5 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
ACO pyrimidine F6 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
ACO ribose F7 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ACO N1A S1 1
ACO C2A S1 1
ACO N3A S1 1
ACO C4A S1 1
ACO C5A S1 1
ACO C6A S1 1
ACO N7A S1 1
ACO C8A S1 1
ACO N9A S1 1
ACO C1B S1 1
ACO C2B S1 1
ACO C3B S1 1
ACO C4B S1 1
ACO O4B S1 1
ACO N1A F1 1
ACO C6A F1 1
ACO C5A F1 1
ACO C4A F1 1
ACO N3A F1 1
ACO C2A F1 1
ACO N9A F1 1
ACO C8A F1 1
ACO N7A F1 1
ACO N6A F1 1
ACO N8P F2 1
ACO C9P F2 1
ACO O9P F2 1
ACO CAP F2 1
ACO N4P F2 2
ACO C5P F2 2
ACO O5P F2 2
ACO C6P F2 2
ACO C4A F3 1
ACO C5A F3 1
ACO N7A F3 1
ACO C8A F3 1
ACO N9A F3 1
ACO O3B F4 1
ACO P3B F4 1
ACO O7A F4 1
ACO O8A F4 1
ACO O9A F4 1
ACO O5B F4 2
ACO P1A F4 2
ACO O1A F4 2
ACO O2A F4 2
ACO O3A F4 2
ACO O3A F4 3
ACO P2A F4 3
ACO O4A F4 3
ACO O5A F4 3
ACO O6A F4 3
ACO N7A F5 1
ACO C8A F5 1
ACO N9A F5 1
ACO C4A F5 1
ACO C5A F5 1
ACO C6A F5 1
ACO N1A F5 1
ACO C2A F5 1
ACO N3A F5 1
ACO C5A F6 1
ACO C4A F6 1
ACO N3A F6 1
ACO C2A F6 1
ACO N1A F6 1
ACO C6A F6 1
ACO C2B F7 1
ACO C3B F7 1
ACO C4B F7 1
ACO O4B F7 1
ACO C1B F7 1
ACO C5B F7 1
ACO O5B F7 1
ACO O3B F7 1
ACO O2B F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ACO
_pdbe_chem_comp_rdkit_properties.exactmw 809.126
_pdbe_chem_comp_rdkit_properties.amw 809.578
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 24
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 10
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 29
_pdbe_chem_comp_rdkit_properties.NumHBD 9
_pdbe_chem_comp_rdkit_properties.NumHBA 23
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 51
_pdbe_chem_comp_rdkit_properties.NumAtoms 89
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 28
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.652
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 7
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 346.925
_pdbe_chem_comp_rdkit_properties.tpsa 363.630
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.124
_pdbe_chem_comp_rdkit_properties.CrippenMR 169.742
_pdbe_chem_comp_rdkit_properties.chi0v 26.820
_pdbe_chem_comp_rdkit_properties.chi1v 16.719
_pdbe_chem_comp_rdkit_properties.chi2v 7.398
_pdbe_chem_comp_rdkit_properties.chi3v 7.398
_pdbe_chem_comp_rdkit_properties.chi4v 4.865
_pdbe_chem_comp_rdkit_properties.chi0n 61.321
_pdbe_chem_comp_rdkit_properties.chi1n 29.759
_pdbe_chem_comp_rdkit_properties.chi2n 4.383
_pdbe_chem_comp_rdkit_properties.chi3n 4.383
_pdbe_chem_comp_rdkit_properties.chi4n 2.601
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.440
_pdbe_chem_comp_rdkit_properties.kappa1 14.005
_pdbe_chem_comp_rdkit_properties.kappa2 17.590
_pdbe_chem_comp_rdkit_properties.kappa3 12.876
_pdbe_chem_comp_rdkit_properties.Phi 4.830
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ACO UniChem ChEMBL CHEMBL1230809
ACO UniChem PDBe ACO
ACO UniChem 'Guide to Pharmacology' 3038
ACO UniChem ChEBI 15351
ACO UniChem ZINC ZINC000008551095
ACO UniChem fdasrs 76Q83YLO3O
ACO UniChem SureChEMBL SCHEMBL6086
ACO UniChem HMDB HMDB0001206
ACO UniChem 'PubChem TPHARMA' 99231516
ACO UniChem NMRShiftDB 60020566
ACO UniChem ACTor 72-89-9
ACO UniChem BindingDb 213238
ACO UniChem BindingDb 50541870
ACO UniChem LipidMaps LMFA07050281
ACO UniChem MetaboLights MTBLC15351
ACO UniChem BRENDA 13093
ACO UniChem BRENDA 16637
ACO UniChem BRENDA 21725
ACO UniChem BRENDA 29
ACO UniChem BRENDA 43682
ACO UniChem BRENDA 44788
ACO UniChem BRENDA 50353
ACO UniChem BRENDA 62901
ACO UniChem BRENDA 92190
ACO UniChem ChemicalBook CB7876938
ACO UniChem rxnorm 'ACETYL COENZYME A'
ACO UniChem 'Probes And Drugs' PD046466
ACO UniChem Nikkaji J1.124.268E
ACO UniChem PubChem 444493
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ACO N1A -9.299 1.299 -3.468 ETKDGv3 1
ACO C2A -9.300 2.219 -2.530 ETKDGv3 2
ACO N3A -8.061 2.629 -1.904 ETKDGv3 3
ACO C4A -6.963 2.098 -2.346 ETKDGv3 4
ACO C5A -6.937 1.097 -3.348 ETKDGv3 5
ACO C6A -8.071 0.672 -3.904 ETKDGv3 6
ACO N6A -8.091 -0.380 -4.869 ETKDGv3 7
ACO N7A -5.614 0.591 -3.463 ETKDGv3 8
ACO C8A -4.913 1.262 -2.586 ETKDGv3 9
ACO N9A -5.654 2.251 -1.837 ETKDGv3 10
ACO C1B -5.289 2.804 -0.534 ETKDGv3 11
ACO C2B -5.562 1.803 0.578 ETKDGv3 12
ACO O2B -6.860 1.958 1.090 ETKDGv3 13
ACO C3B -4.499 2.142 1.593 ETKDGv3 14
ACO O3B -4.972 3.163 2.454 ETKDGv3 15
ACO P3B -4.240 3.006 3.989 ETKDGv3 16
ACO O7A -2.734 3.071 3.866 ETKDGv3 17
ACO O8A -4.768 4.271 4.982 ETKDGv3 18
ACO O9A -4.684 1.533 4.693 ETKDGv3 19
ACO C4B -3.373 2.688 0.703 ETKDGv3 20
ACO O4B -3.919 3.137 -0.521 ETKDGv3 21
ACO C5B -2.306 1.625 0.412 ETKDGv3 22
ACO O5B -1.647 1.280 1.608 ETKDGv3 23
ACO P1A -0.554 0.017 1.271 ETKDGv3 24
ACO O1A 0.199 -0.304 2.543 ETKDGv3 25
ACO O2A 0.538 0.530 0.082 ETKDGv3 26
ACO O3A -1.435 -1.346 0.752 ETKDGv3 27
ACO P2A -0.328 -2.571 0.335 ETKDGv3 28
ACO O4A -1.114 -3.840 0.096 ETKDGv3 29
ACO O5A 0.472 -2.159 -1.102 ETKDGv3 30
ACO O6A 0.781 -2.830 1.608 ETKDGv3 31
ACO CBP 2.643 -4.171 2.410 ETKDGv3 32
ACO CCP 1.686 -3.845 1.232 ETKDGv3 33
ACO CDP 1.807 -4.743 3.579 ETKDGv3 34
ACO CEP 3.642 -5.259 1.951 ETKDGv3 35
ACO CAP 3.399 -2.891 2.902 ETKDGv3 36
ACO OAP 4.220 -3.207 4.000 ETKDGv3 37
ACO C9P 4.235 -2.248 1.818 ETKDGv3 38
ACO O9P 5.430 -2.615 1.650 ETKDGv3 39
ACO N8P 3.668 -1.234 0.976 ETKDGv3 40
ACO C7P 4.401 -0.628 -0.132 ETKDGv3 41
ACO C6P 4.557 -1.621 -1.287 ETKDGv3 42
ACO C5P 5.259 -0.967 -2.437 ETKDGv3 43
ACO O5P 4.586 -0.516 -3.403 ETKDGv3 44
ACO N4P 6.684 -0.805 -2.407 ETKDGv3 45
ACO C3P 7.393 0.083 -3.327 ETKDGv3 46
ACO C2P 7.093 1.548 -3.009 ETKDGv3 47
ACO S1P 7.645 1.961 -1.318 ETKDGv3 48
ACO C 6.816 3.553 -1.305 ETKDGv3 49
ACO O 7.410 4.547 -1.691 ETKDGv3 50
ACO CH3 5.406 3.667 -0.819 ETKDGv3 51
ACO H2A -10.233 2.665 -2.217 ETKDGv3 52
ACO H61A -7.210 -0.843 -5.184 ETKDGv3 53
ACO H62A -8.999 -0.697 -5.274 ETKDGv3 54
ACO H8A -3.862 1.068 -2.423 ETKDGv3 55
ACO H1B -5.871 3.736 -0.359 ETKDGv3 56
ACO H2B -5.412 0.761 0.205 ETKDGv3 57
ACO HO2A -7.010 1.195 1.706 ETKDGv3 58
ACO H3B -4.219 1.202 2.129 ETKDGv3 59
ACO HOA8 -4.560 5.094 4.473 ETKDGv3 60
ACO HOA9 -5.674 1.528 4.660 ETKDGv3 61
ACO H4B -2.875 3.550 1.199 ETKDGv3 62
ACO H51A -2.803 0.740 -0.049 ETKDGv3 63
ACO H52A -1.580 2.055 -0.315 ETKDGv3 64
ACO HOA2 1.005 1.305 0.483 ETKDGv3 65
ACO HOA5 1.298 -1.697 -0.817 ETKDGv3 66
ACO H121 2.284 -3.525 0.351 ETKDGv3 67
ACO H122 1.140 -4.776 0.952 ETKDGv3 68
ACO H131 1.098 -3.981 3.968 ETKDGv3 69
ACO H132 2.462 -5.064 4.417 ETKDGv3 70
ACO H133 1.220 -5.627 3.250 ETKDGv3 71
ACO H141 4.360 -5.507 2.762 ETKDGv3 72
ACO H142 3.104 -6.190 1.671 ETKDGv3 73
ACO H143 4.218 -4.923 1.063 ETKDGv3 74
ACO H10 2.639 -2.146 3.237 ETKDGv3 75
ACO HO1 4.447 -2.350 4.450 ETKDGv3 76
ACO HN8 2.712 -0.874 1.191 ETKDGv3 77
ACO H71 5.398 -0.284 0.223 ETKDGv3 78
ACO H72 3.840 0.263 -0.491 ETKDGv3 79
ACO H61 5.142 -2.506 -0.960 ETKDGv3 80
ACO H62 3.557 -1.977 -1.615 ETKDGv3 81
ACO HN4 7.236 -1.310 -1.677 ETKDGv3 82
ACO H31 7.096 -0.146 -4.373 ETKDGv3 83
ACO H32 8.488 -0.092 -3.240 ETKDGv3 84
ACO H21 7.630 2.197 -3.732 ETKDGv3 85
ACO H22 6.003 1.737 -3.112 ETKDGv3 86
ACO HH31 5.023 2.675 -0.502 ETKDGv3 87
ACO HH32 5.364 4.361 0.046 ETKDGv3 88
ACO HH33 4.761 4.057 -1.634 ETKDGv3 89
#