data_AFM
#
_chem_comp.id AFM
_chem_comp.name 2-fluoro-5-[(3S,4R)-3-{[(1H-indazol-5-yl)oxy]methyl}piperidin-4-yl]-N-[(1H-pyrazol-3-yl)methyl]benzamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H25 F N6 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-07-16
_chem_comp.pdbx_modified_date 2017-12-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 448.493
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code AFM
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5WG3
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AFM C10 C1 C 0 1 Y N N N N N -21.993 27.738 17.333 3.597 0.178 -0.216 C10 AFM 1
AFM C13 C2 C 0 1 Y N N N N N -24.552 26.690 16.925 4.619 2.711 0.278 C13 AFM 2
AFM C17 C3 C 0 1 Y N N N N N -23.651 26.010 17.707 5.479 1.597 0.234 C17 AFM 3
AFM C21 C4 C 0 1 N N N N N N -18.352 32.003 18.133 0.036 -4.576 -2.629 C21 AFM 4
AFM C22 C5 C 0 1 N N N N N N -17.719 30.817 17.396 -0.637 -4.150 -1.322 C22 AFM 5
AFM C24 C6 C 0 1 Y N N N N N -15.881 26.887 16.839 -2.311 -0.862 1.585 C24 AFM 6
AFM C28 C7 C 0 1 Y N N N N N -13.324 24.674 20.003 -4.708 2.637 -0.795 C28 AFM 7
AFM F01 F1 F 0 1 N N N N N N -15.614 25.275 15.114 -2.523 -1.211 3.932 F01 AFM 8
AFM C02 C8 C 0 1 Y N N N N N -16.319 26.299 15.670 -1.980 -1.566 2.747 C02 AFM 9
AFM C03 C9 C 0 1 Y N N N N N -17.477 26.748 15.065 -1.095 -2.627 2.679 C03 AFM 10
AFM C04 C10 C 0 1 Y N N N N N -18.191 27.793 15.634 -0.540 -2.990 1.467 C04 AFM 11
AFM C05 C11 C 0 1 Y N N N N N -17.755 28.395 16.807 -0.864 -2.297 0.313 C05 AFM 12
AFM C06 C12 C 0 1 N N R N N N -18.576 29.594 17.446 -0.253 -2.702 -1.004 C06 AFM 13
AFM C07 C13 C 0 1 N N S N N N -18.976 29.218 18.837 1.271 -2.594 -0.915 C07 AFM 14
AFM C08 C14 C 0 1 N N N N N N -20.132 28.173 18.767 1.666 -1.138 -0.657 C08 AFM 15
AFM O09 O1 O 0 1 N N N N N N -20.720 28.292 17.503 3.079 -1.056 -0.459 O09 AFM 16
AFM C11 C15 C 0 1 Y N N N N N -22.911 28.421 16.538 2.753 1.286 -0.164 C11 AFM 17
AFM C12 C16 C 0 1 Y N N N N N -24.180 27.909 16.333 3.253 2.533 0.078 C12 AFM 18
AFM N14 N1 N 0 1 Y N N N N N -25.700 25.984 16.890 5.405 3.806 0.536 N14 AFM 19
AFM N15 N2 N 0 1 Y N N N N N -25.575 24.865 17.626 6.737 3.395 0.654 N15 AFM 20
AFM C16 C17 C 0 1 Y N N N N N -24.354 24.840 18.139 6.825 2.107 0.477 C16 AFM 21
AFM C18 C18 C 0 1 Y N N N N N -22.353 26.529 17.919 4.953 0.324 -0.016 C18 AFM 22
AFM C19 C19 C 0 1 N N N N N N -19.507 30.390 19.678 1.889 -3.064 -2.234 C19 AFM 23
AFM N20 N3 N 0 1 N N N N N N -18.805 31.698 19.523 1.493 -4.455 -2.493 N20 AFM 24
AFM C23 C20 C 0 1 Y N N N N N -16.594 27.937 17.406 -1.745 -1.237 0.365 C23 AFM 25
AFM C25 C21 C 0 1 N N N N N N -14.599 26.387 17.502 -3.259 0.268 1.647 C25 AFM 26
AFM N26 N4 N 0 1 N N N N N N -14.387 26.596 18.927 -3.580 0.941 0.524 N26 AFM 27
AFM C27 C22 C 0 1 N N N N N N -13.161 26.125 19.558 -4.521 2.062 0.585 C27 AFM 28
AFM C29 C23 C 0 1 Y N N N N N -12.333 23.852 20.475 -5.734 2.311 -1.688 C29 AFM 29
AFM C30 C24 C 0 1 Y N N N N N -12.912 22.624 20.765 -5.555 3.042 -2.812 C30 AFM 30
AFM N31 N5 N 0 1 Y N N N N N -14.212 22.715 20.473 -4.456 3.805 -2.637 N31 AFM 31
AFM N32 N6 N 0 1 Y N N N N N -14.437 23.985 20.009 -3.941 3.533 -1.363 N32 AFM 32
AFM O33 O2 O 0 1 N N N N N N -13.779 25.835 16.854 -3.751 0.592 2.711 O33 AFM 33
AFM H1 H1 H 0 1 N N N N N N -17.609 32.812 18.184 -0.223 -5.611 -2.851 H1 AFM 34
AFM H2 H2 H 0 1 N N N N N N -19.224 32.342 17.554 -0.308 -3.933 -3.440 H2 AFM 35
AFM H3 H3 H 0 1 N N N N N N -16.749 30.588 17.862 -1.719 -4.225 -1.428 H3 AFM 36
AFM H4 H4 H 0 1 N N N N N N -17.564 31.097 16.344 -0.304 -4.801 -0.513 H4 AFM 37
AFM H5 H5 H 0 1 N N N N N N -17.825 26.287 14.152 -0.837 -3.172 3.575 H5 AFM 38
AFM H6 H6 H 0 1 N N N N N N -19.096 28.142 15.159 0.151 -3.819 1.419 H6 AFM 39
AFM H7 H7 H 0 1 N N N N N N -19.478 29.755 16.838 -0.621 -2.046 -1.793 H7 AFM 40
AFM H8 H8 H 0 1 N N N N N N -18.120 28.763 19.356 1.634 -3.220 -0.100 H8 AFM 41
AFM H9 H9 H 0 1 N N N N N N -20.876 28.381 19.550 1.383 -0.528 -1.514 H9 AFM 42
AFM H10 H10 H 0 1 N N N N N N -19.731 27.158 18.902 1.152 -0.775 0.233 H10 AFM 43
AFM H11 H11 H 0 1 N N N N N N -22.630 29.357 16.078 1.692 1.157 -0.318 H11 AFM 44
AFM H12 H12 H 0 1 N N N N N N -24.886 28.447 15.717 2.587 3.383 0.115 H12 AFM 45
AFM H13 H13 H 0 1 N N N N N N -26.523 26.253 16.390 5.088 4.719 0.623 H13 AFM 46
AFM H14 H14 H 0 1 N N N N N N -23.955 24.066 18.777 7.731 1.520 0.513 H14 AFM 47
AFM H15 H15 H 0 1 N N N N N N -21.646 25.990 18.532 5.605 -0.536 -0.052 H15 AFM 48
AFM H16 H16 H 0 1 N N N N N N -20.562 30.544 19.407 1.536 -2.429 -3.047 H16 AFM 49
AFM H17 H17 H 0 1 N N N N N N -19.439 30.099 20.736 2.975 -3.002 -2.169 H17 AFM 50
AFM H18 H18 H 0 1 N N N N N N -18.001 31.693 20.118 1.841 -5.070 -1.773 H18 AFM 51
AFM H20 H20 H 0 1 N N N N N N -16.241 28.397 18.317 -1.999 -0.701 -0.537 H20 AFM 52
AFM H21 H21 H 0 1 N N N N N N -15.083 27.063 19.473 -3.188 0.682 -0.325 H21 AFM 53
AFM H22 H22 H 0 1 N N N N N N -12.332 26.194 18.838 -4.127 2.831 1.249 H22 AFM 54
AFM H23 H23 H 0 1 N N N N N N -12.939 26.752 20.434 -5.481 1.711 0.965 H23 AFM 55
AFM H24 H24 H 0 1 N N N N N N -11.292 24.112 20.599 -6.528 1.600 -1.511 H24 AFM 56
AFM H25 H25 H 0 1 N N N N N N -12.404 21.754 21.155 -6.181 3.020 -3.692 H25 AFM 57
AFM H26 H26 H 0 1 N N N N N N -14.894 21.991 20.574 -4.087 4.430 -3.280 H26 AFM 58
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AFM C03 C04 DOUB Y N 1
AFM C03 C02 SING Y N 2
AFM F01 C02 SING N N 3
AFM C04 C05 SING Y N 4
AFM C02 C24 DOUB Y N 5
AFM C12 C11 DOUB Y N 6
AFM C12 C13 SING Y N 7
AFM C11 C10 SING Y N 8
AFM C05 C23 DOUB Y N 9
AFM C05 C06 SING N N 10
AFM C24 C23 SING Y N 11
AFM C24 C25 SING N N 12
AFM O33 C25 DOUB N N 13
AFM N14 C13 SING Y N 14
AFM N14 N15 SING Y N 15
AFM C13 C17 DOUB Y N 16
AFM C10 O09 SING N N 17
AFM C10 C18 DOUB Y N 18
AFM C22 C06 SING N N 19
AFM C22 C21 SING N N 20
AFM C06 C07 SING N N 21
AFM C25 N26 SING N N 22
AFM O09 C08 SING N N 23
AFM N15 C16 DOUB Y N 24
AFM C17 C18 SING Y N 25
AFM C17 C16 SING Y N 26
AFM C21 N20 SING N N 27
AFM C08 C07 SING N N 28
AFM C07 C19 SING N N 29
AFM N26 C27 SING N N 30
AFM N20 C19 SING N N 31
AFM C27 C28 SING N N 32
AFM C28 N32 DOUB Y N 33
AFM C28 C29 SING Y N 34
AFM N32 N31 SING Y N 35
AFM N31 C30 SING Y N 36
AFM C29 C30 DOUB Y N 37
AFM C21 H1 SING N N 38
AFM C21 H2 SING N N 39
AFM C22 H3 SING N N 40
AFM C22 H4 SING N N 41
AFM C03 H5 SING N N 42
AFM C04 H6 SING N N 43
AFM C06 H7 SING N N 44
AFM C07 H8 SING N N 45
AFM C08 H9 SING N N 46
AFM C08 H10 SING N N 47
AFM C11 H11 SING N N 48
AFM C12 H12 SING N N 49
AFM N14 H13 SING N N 50
AFM C16 H14 SING N N 51
AFM C18 H15 SING N N 52
AFM C19 H16 SING N N 53
AFM C19 H17 SING N N 54
AFM N20 H18 SING N N 55
AFM C23 H20 SING N N 56
AFM N26 H21 SING N N 57
AFM C27 H22 SING N N 58
AFM C27 H23 SING N N 59
AFM C29 H24 SING N N 60
AFM C30 H25 SING N N 61
AFM N31 H26 SING N N 62
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AFM SMILES ACDLabs 12.01 c4(OCC1C(CCNC1)c2ccc(c(c2)C(NCc3nncc3)=O)F)cc5c(cc4)nnc5
AFM InChI InChI 1.03 InChI=1S/C24H25FN6O2/c25-22-3-1-15(10-21(22)24(32)27-13-18-5-8-28-30-18)20-6-7-26-11-17(20)14-33-19-2-4-23-16(9-19)12-29-31-23/h1-5,8-10,12,17,20,26H,6-7,11,13-14H2,(H,27,32)(H,28,30)(H,29,31)/t17-,20-/m0/s1
AFM InChIKey InChI 1.03 WQIAYJIICYWVKJ-PXNSSMCTSA-N
AFM SMILES_CANONICAL CACTVS 3.385 Fc1ccc(cc1C(=O)NCc2cc[nH]n2)[C@@H]3CCNC[C@H]3COc4ccc5[nH]ncc5c4
AFM SMILES CACTVS 3.385 Fc1ccc(cc1C(=O)NCc2cc[nH]n2)[CH]3CCNC[CH]3COc4ccc5[nH]ncc5c4
AFM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1cc(c(cc1[C@@H]2CCNC[C@H]2COc3ccc4c(c3)cn[nH]4)C(=O)NCc5cc[nH]n5)F
AFM SMILES "OpenEye OEToolkits" 2.0.6 c1cc(c(cc1C2CCNCC2COc3ccc4c(c3)cn[nH]4)C(=O)NCc5cc[nH]n5)F
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AFM "SYSTEMATIC NAME" ACDLabs 12.01 2-fluoro-5-[(3S,4R)-3-{[(1H-indazol-5-yl)oxy]methyl}piperidin-4-yl]-N-[(1H-pyrazol-3-yl)methyl]benzamide
AFM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 2-fluoranyl-5-[(3~{S},4~{R})-3-(1~{H}-indazol-5-yloxymethyl)piperidin-4-yl]-~{N}-(1~{H}-pyrazol-3-ylmethyl)benzamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AFM 'Create component' 2017-07-16 RCSB
AFM 'Initial release' 2017-12-27 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
AFM C10 C 9.495 3.314 1
AFM C13 C 12.093 1.814 2
AFM C17 C 12.093 3.314 3
AFM C21 C 3.000 5.564 4
AFM C22 C 3.000 4.064 5
AFM C24 C 5.598 -0.436 6
AFM C28 C 8.196 -4.936 7
AFM F01 F 4.299 -2.686 8
AFM C02 C 4.299 -1.186 9
AFM C03 C 3.000 -0.436 10
AFM C04 C 3.000 1.064 11
AFM C05 C 4.299 1.814 12
AFM C06 C 4.299 3.314 13
AFM C07 C 5.598 4.064 14
AFM C08 C 6.897 3.314 15
AFM O09 O 8.196 4.064 16
AFM C11 C 9.495 1.814 17
AFM C12 C 10.794 1.064 18
AFM N14 N 13.513 1.357 19
AFM N15 N 14.388 2.564 20
AFM C16 C 13.513 3.771 21
AFM C18 C 10.794 4.064 22
AFM C19 C 5.598 5.564 23
AFM N20 N 4.299 6.314 24
AFM C23 C 5.598 1.064 25
AFM C25 C 6.897 -1.186 26
AFM N26 N 6.897 -2.686 27
AFM C27 C 8.196 -3.436 28
AFM C29 C 6.983 -5.818 29
AFM C30 C 7.446 -7.244 30
AFM N31 N 8.946 -7.244 31
AFM N32 N 9.410 -5.818 32
AFM O33 O 8.196 -0.436 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
AFM C03 C04 SINGLE NONE 1
AFM C03 C02 DOUBLE NONE 2
AFM F01 C02 SINGLE NONE 3
AFM C04 C05 DOUBLE NONE 4
AFM C02 C24 SINGLE NONE 5
AFM C12 C11 DOUBLE NONE 6
AFM C12 C13 SINGLE NONE 7
AFM C11 C10 SINGLE NONE 8
AFM C05 C23 SINGLE NONE 9
AFM C06 C05 SINGLE BEGINDASH 10
AFM C24 C23 DOUBLE NONE 11
AFM C24 C25 SINGLE NONE 12
AFM O33 C25 DOUBLE NONE 13
AFM N14 C13 SINGLE NONE 14
AFM N14 N15 SINGLE NONE 15
AFM C13 C17 DOUBLE NONE 16
AFM C10 O09 SINGLE NONE 17
AFM C10 C18 DOUBLE NONE 18
AFM C22 C06 SINGLE NONE 19
AFM C22 C21 SINGLE NONE 20
AFM C06 C07 SINGLE NONE 21
AFM C25 N26 SINGLE NONE 22
AFM O09 C08 SINGLE NONE 23
AFM N15 C16 DOUBLE NONE 24
AFM C17 C18 SINGLE NONE 25
AFM C17 C16 SINGLE NONE 26
AFM C21 N20 SINGLE NONE 27
AFM C07 C08 SINGLE BEGINWEDGE 28
AFM C07 C19 SINGLE NONE 29
AFM N26 C27 SINGLE NONE 30
AFM N20 C19 SINGLE NONE 31
AFM C27 C28 SINGLE NONE 32
AFM C28 N32 DOUBLE NONE 33
AFM C28 C29 SINGLE NONE 34
AFM N32 N31 SINGLE NONE 35
AFM N31 C30 SINGLE NONE 36
AFM C29 C30 DOUBLE NONE 37
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
AFM MurckoScaffold S1 scaffold 'O=C(NCc1cc[nH]n1)c1cccc([C@@H]2CCNC[C@H]2COc2ccc3[nH]ncc3c2)c1' InChI=1S/C24H26N6O2/c31-24(26-14-20-6-9-27-29-20)17-3-1-2-16(10-17)22-7-8-25-12-19(22)15-32-21-4-5-23-18(11-21)13-28-30-23/h1-6,9-11,13,19,22,25H,7-8,12,14-15H2,(H,26,31)(H,27,29)(H,28,30)/t19-,22-/m0/s1 FSIAOHCYEHQEDV-UGKGYDQZSA-N
AFM amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
AFM phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
AFM pyrazole F3 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
AFM C10 S1 1
AFM C13 S1 1
AFM C17 S1 1
AFM C21 S1 1
AFM C22 S1 1
AFM C24 S1 1
AFM C28 S1 1
AFM C02 S1 1
AFM C03 S1 1
AFM C04 S1 1
AFM C05 S1 1
AFM C06 S1 1
AFM C07 S1 1
AFM C08 S1 1
AFM O09 S1 1
AFM C11 S1 1
AFM C12 S1 1
AFM N14 S1 1
AFM N15 S1 1
AFM C16 S1 1
AFM C18 S1 1
AFM C19 S1 1
AFM N20 S1 1
AFM C23 S1 1
AFM C25 S1 1
AFM N26 S1 1
AFM C27 S1 1
AFM C29 S1 1
AFM C30 S1 1
AFM N31 S1 1
AFM N32 S1 1
AFM O33 S1 1
AFM N26 F1 1
AFM C25 F1 1
AFM O33 F1 1
AFM C24 F1 1
AFM C10 F2 1
AFM C11 F2 1
AFM C12 F2 1
AFM C13 F2 1
AFM C17 F2 1
AFM C18 F2 1
AFM C24 F2 2
AFM C02 F2 2
AFM C03 F2 2
AFM C04 F2 2
AFM C05 F2 2
AFM C23 F2 2
AFM C13 F3 1
AFM C17 F3 1
AFM C16 F3 1
AFM N15 F3 1
AFM N14 F3 1
AFM C28 F3 2
AFM C29 F3 2
AFM C30 F3 2
AFM N31 F3 2
AFM N32 F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id AFM
_pdbe_chem_comp_rdkit_properties.exactmw 448.202
_pdbe_chem_comp_rdkit_properties.amw 448.502
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 58
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.292
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 224.832
_pdbe_chem_comp_rdkit_properties.tpsa 107.720
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.072
_pdbe_chem_comp_rdkit_properties.CrippenMR 117.850
_pdbe_chem_comp_rdkit_properties.chi0v 15.878
_pdbe_chem_comp_rdkit_properties.chi1v 8.740
_pdbe_chem_comp_rdkit_properties.chi2v 3.859
_pdbe_chem_comp_rdkit_properties.chi3v 3.859
_pdbe_chem_comp_rdkit_properties.chi4v 2.415
_pdbe_chem_comp_rdkit_properties.chi0n 40.878
_pdbe_chem_comp_rdkit_properties.chi1n 21.029
_pdbe_chem_comp_rdkit_properties.chi2n 3.859
_pdbe_chem_comp_rdkit_properties.chi3n 3.859
_pdbe_chem_comp_rdkit_properties.chi4n 2.415
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.720
_pdbe_chem_comp_rdkit_properties.kappa1 6.894
_pdbe_chem_comp_rdkit_properties.kappa2 9.415
_pdbe_chem_comp_rdkit_properties.kappa3 4.727
_pdbe_chem_comp_rdkit_properties.Phi 1.967
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
AFM UniChem PDBe AFM
AFM UniChem PubChem 131953472
AFM UniChem BRENDA 256749
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
AFM C10 -3.660 0.840 -0.519 ETKDGv3 1
AFM C13 -5.705 2.652 0.114 ETKDGv3 2
AFM C17 -5.940 1.647 -0.694 ETKDGv3 3
AFM C21 -1.635 -2.985 3.114 ETKDGv3 4
AFM C22 -0.229 -2.882 2.497 ETKDGv3 5
AFM C24 3.122 -1.464 -0.573 ETKDGv3 6
AFM C28 5.902 1.918 -1.764 ETKDGv3 7
AFM F01 3.903 -2.931 -2.405 ETKDGv3 8
AFM C02 2.935 -2.601 -1.515 ETKDGv3 9
AFM C03 1.827 -3.348 -1.454 ETKDGv3 10
AFM C04 0.785 -3.058 -0.451 ETKDGv3 11
AFM C05 0.945 -2.048 0.426 ETKDGv3 12
AFM C06 -0.115 -1.729 1.468 ETKDGv3 13
AFM C07 -1.500 -1.388 0.852 ETKDGv3 14
AFM C08 -1.411 -0.279 -0.222 ETKDGv3 15
AFM O09 -2.673 -0.095 -0.868 ETKDGv3 16
AFM C11 -3.396 2.009 0.397 ETKDGv3 17
AFM C12 -4.379 2.876 0.703 ETKDGv3 18
AFM N14 -6.887 3.414 0.275 ETKDGv3 19
AFM N15 -7.871 2.788 -0.504 ETKDGv3 20
AFM C16 -7.343 1.751 -1.081 ETKDGv3 21
AFM C18 -4.890 0.681 -1.050 ETKDGv3 22
AFM C19 -2.501 -0.999 1.978 ETKDGv3 23
AFM N20 -2.244 -1.661 3.272 ETKDGv3 24
AFM C23 2.179 -1.224 0.358 ETKDGv3 25
AFM C25 4.331 -0.612 -0.638 ETKDGv3 26
AFM N26 4.948 -0.306 -1.898 ETKDGv3 27
AFM C27 6.182 0.468 -1.996 ETKDGv3 28
AFM C29 6.191 2.661 -0.536 ETKDGv3 29
AFM C30 5.734 3.884 -0.749 ETKDGv3 30
AFM N31 5.169 3.940 -2.049 ETKDGv3 31
AFM N32 5.301 2.674 -2.624 ETKDGv3 32
AFM O33 4.809 -0.132 0.427 ETKDGv3 33
AFM H1 -1.567 -3.479 4.107 ETKDGv3 34
AFM H2 -2.287 -3.622 2.475 ETKDGv3 35
AFM H3 0.514 -2.713 3.307 ETKDGv3 36
AFM H4 0.011 -3.866 2.039 ETKDGv3 37
AFM H5 1.697 -4.182 -2.131 ETKDGv3 38
AFM H6 -0.102 -3.678 -0.430 ETKDGv3 39
AFM H7 0.209 -0.823 2.029 ETKDGv3 40
AFM H8 -1.892 -2.302 0.352 ETKDGv3 41
AFM H9 -0.697 -0.595 -1.010 ETKDGv3 42
AFM H10 -1.006 0.662 0.197 ETKDGv3 43
AFM H11 -2.418 2.183 0.818 ETKDGv3 44
AFM H12 -4.198 3.718 1.359 ETKDGv3 45
AFM H13 -7.023 4.274 0.851 ETKDGv3 46
AFM H14 -7.884 1.086 -1.741 ETKDGv3 47
AFM H15 -5.108 -0.143 -1.716 ETKDGv3 48
AFM H16 -2.474 0.098 2.146 ETKDGv3 49
AFM H17 -3.533 -1.249 1.649 ETKDGv3 50
AFM H18 -1.599 -1.064 3.842 ETKDGv3 51
AFM H20 2.300 -0.403 1.055 ETKDGv3 52
AFM H21 4.468 -0.574 -2.786 ETKDGv3 53
AFM H22 6.928 0.092 -1.262 ETKDGv3 54
AFM H23 6.616 0.344 -3.012 ETKDGv3 55
AFM H24 6.672 2.299 0.364 ETKDGv3 56
AFM H25 5.774 4.710 -0.051 ETKDGv3 57
AFM H26 4.718 4.763 -2.506 ETKDGv3 58
#