data_ATS
#
_chem_comp.id ATS
_chem_comp.name "GAMMA-ARSONO-BETA, GAMMA-METHYLENEADENOSINE-5'-DIPHOSPHATE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H18 As N5 O12 P2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2001-03-28
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 549.156
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ATS
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag Y
_chem_comp.pdbx_model_coordinates_db_code 1GLJ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ATS AS1 AS1 AS 0 0 N N N N N N 35.429 11.033 31.021 ? ? ? AS1 ATS 1
ATS OG2 OG2 O 0 1 N N N N N N 34.051 9.954 30.996 ? ? ? OG2 ATS 2
ATS OG3 OG3 O 0 1 N N N N N N 36.367 11.059 29.579 ? ? ? OG3 ATS 3
ATS OG1 OG1 O 0 1 N N N N N N 36.392 10.786 32.339 ? ? ? OG1 ATS 4
ATS PA PA P 0 1 N N S N N N 33.992 14.507 34.254 ? ? ? PA ATS 5
ATS "O5'" "O5'" O 0 1 N N N N N N 34.687 15.934 34.402 ? ? ? "O5'" ATS 6
ATS O11 O11 O 0 1 N N N N N N 34.991 13.437 34.503 ? ? ? O11 ATS 7
ATS O13 O13 O 0 1 N N N N N N 33.355 14.347 32.804 ? ? ? O13 ATS 8
ATS O12 O12 O 0 1 N N N N N N 32.914 14.405 35.262 ? ? ? O12 ATS 9
ATS "C5'" "C5'" C 0 1 N N N N N N 35.593 16.374 33.424 ? ? ? "C5'" ATS 10
ATS "C4'" "C4'" C 0 1 N N R N N N 35.035 17.548 32.640 ? ? ? "C4'" ATS 11
ATS "O4'" "O4'" O 0 1 N N N N N N 34.708 18.643 33.532 ? ? ? "O4'" ATS 12
ATS "C2'" "C2'" C 0 1 N N R N N N 36.451 19.450 32.199 ? ? ? "C2'" ATS 13
ATS "O2'" "O2'" O 0 1 N N N N N N 36.678 20.354 31.164 ? ? ? "O2'" ATS 14
ATS "C3'" "C3'" C 0 1 N N S N N N 35.957 18.139 31.585 ? ? ? "C3'" ATS 15
ATS "O3'" "O3'" O 0 1 N N N N N N 35.294 18.352 30.361 ? ? ? "O3'" ATS 16
ATS "C1'" "C1'" C 0 1 N N R N N N 35.267 19.870 33.069 ? ? ? "C1'" ATS 17
ATS N9 N9 N 0 1 Y N N N N N 35.502 20.690 34.276 ? ? ? N9 ATS 18
ATS C4 C4 C 0 1 Y N N N N N 35.025 21.912 34.680 ? ? ? C4 ATS 19
ATS N3 N3 N 0 1 Y N N N N N 34.414 22.827 33.977 ? ? ? N3 ATS 20
ATS C2 C2 C 0 1 Y N N N N N 34.211 23.937 34.680 ? ? ? C2 ATS 21
ATS N1 N1 N 0 1 Y N N N N N 34.516 24.219 35.929 ? ? ? N1 ATS 22
ATS C6 C6 C 0 1 Y N N N N N 35.148 23.274 36.604 ? ? ? C6 ATS 23
ATS N6 N6 N 0 1 N N N N N N 35.480 23.528 37.862 ? ? ? N6 ATS 24
ATS C5 C5 C 0 1 Y N N N N N 35.422 22.061 35.964 ? ? ? C5 ATS 25
ATS N7 N7 N 0 1 Y N N N N N 36.030 20.935 36.410 ? ? ? N7 ATS 26
ATS C8 C8 C 0 1 Y N N N N N 36.001 20.140 35.389 ? ? ? C8 ATS 27
ATS PB PB P 0 1 N N R N N N 33.310 12.971 31.957 ? ? ? PB ATS 28
ATS OB2 OB2 O 0 1 N N N N N N 32.197 13.040 30.870 ? ? ? OB2 ATS 29
ATS C3B C3B C 0 1 N N N N N N 34.783 12.836 31.067 ? ? ? C3B ATS 30
ATS OB1 OB1 O 0 1 N N N N N N 33.091 11.712 32.855 ? ? ? OB1 ATS 31
ATS HO2 HO2 H 0 1 N N N N N N 33.785 9.759 31.887 ? ? ? HO2 ATS 32
ATS HO3 HO3 H 0 1 N N N N N N 35.789 11.064 28.825 ? ? ? HO3 ATS 33
ATS HOB HOB H 0 1 N N N N N N 35.204 13.006 33.684 ? ? ? HOB ATS 34
ATS "H5'1" "1H5'" H 0 0 N N N N N N 35.778 15.546 32.724 ? ? ? "H5'1" ATS 35
ATS "H5'2" "2H5'" H 0 0 N N N N N N 36.524 16.688 33.918 ? ? ? "H5'2" ATS 36
ATS "H4'" "H4'" H 0 1 N N N N N N 34.162 17.116 32.129 ? ? ? "H4'" ATS 37
ATS "H2'" "H2'" H 0 1 N N N N N N 37.386 19.383 32.774 ? ? ? "H2'" ATS 38
ATS "HO2'" "'HO2" H 0 0 N N N N N N 36.730 21.234 31.517 ? ? ? "HO2'" ATS 39
ATS "H3'" "H3'" H 0 1 N N N N N N 36.785 17.459 31.337 ? ? ? "H3'" ATS 40
ATS "HO3'" "'HO3" H 0 0 N N N N N N 34.357 18.400 30.512 ? ? ? "HO3'" ATS 41
ATS "H1'" "H1'" H 0 1 N N N N N N 34.658 20.523 32.426 ? ? ? "H1'" ATS 42
ATS H2 H2 H 0 1 N N N N N N 33.718 24.733 34.141 ? ? ? H2 ATS 43
ATS HN61 1HN6 H 0 0 N N N N N N 35.068 24.393 38.147 ? ? ? HN61 ATS 44
ATS HN62 2HN6 H 0 0 N N N N N N 36.475 23.592 37.938 ? ? ? HN62 ATS 45
ATS H8 H8 H 0 1 N N N N N N 36.350 19.119 35.432 ? ? ? H8 ATS 46
ATS H3B1 1H3B H 0 0 N N N N N N 34.588 13.156 30.033 ? ? ? H3B1 ATS 47
ATS H3B2 2H3B H 0 0 N N N N N N 35.543 13.470 31.547 ? ? ? H3B2 ATS 48
ATS HB1 HB1 H 0 1 N N N N N N 33.047 10.936 32.308 ? ? ? HB1 ATS 49
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ATS AS1 OG2 SING N N 1
ATS AS1 OG3 SING N N 2
ATS AS1 OG1 DOUB N N 3
ATS AS1 C3B SING N N 4
ATS OG2 HO2 SING N N 5
ATS OG3 HO3 SING N N 6
ATS PA "O5'" SING N N 7
ATS PA O11 SING N N 8
ATS PA O13 SING N N 9
ATS PA O12 DOUB N N 10
ATS "O5'" "C5'" SING N N 11
ATS O11 HOB SING N N 12
ATS O13 PB SING N N 13
ATS "C5'" "C4'" SING N N 14
ATS "C5'" "H5'1" SING N N 15
ATS "C5'" "H5'2" SING N N 16
ATS "C4'" "O4'" SING N N 17
ATS "C4'" "C3'" SING N N 18
ATS "C4'" "H4'" SING N N 19
ATS "O4'" "C1'" SING N N 20
ATS "C2'" "O2'" SING N N 21
ATS "C2'" "C3'" SING N N 22
ATS "C2'" "C1'" SING N N 23
ATS "C2'" "H2'" SING N N 24
ATS "O2'" "HO2'" SING N N 25
ATS "C3'" "O3'" SING N N 26
ATS "C3'" "H3'" SING N N 27
ATS "O3'" "HO3'" SING N N 28
ATS "C1'" N9 SING N N 29
ATS "C1'" "H1'" SING N N 30
ATS N9 C4 SING Y N 31
ATS N9 C8 SING Y N 32
ATS C4 N3 DOUB Y N 33
ATS C4 C5 SING Y N 34
ATS N3 C2 SING Y N 35
ATS C2 N1 DOUB Y N 36
ATS C2 H2 SING N N 37
ATS N1 C6 SING Y N 38
ATS C6 N6 SING N N 39
ATS C6 C5 DOUB Y N 40
ATS N6 HN61 SING N N 41
ATS N6 HN62 SING N N 42
ATS C5 N7 SING Y N 43
ATS N7 C8 DOUB Y N 44
ATS C8 H8 SING N N 45
ATS PB OB2 DOUB N N 46
ATS PB C3B SING N N 47
ATS PB OB1 SING N N 48
ATS C3B H3B1 SING N N 49
ATS C3B H3B2 SING N N 50
ATS OB1 HB1 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ATS SMILES ACDLabs 10.04 O=[As](O)(O)CP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
ATS SMILES_CANONICAL CACTVS 3.341 Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)C[As](O)(O)=O)[C@@H](O)[C@H]3O
ATS SMILES CACTVS 3.341 Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)C[As](O)(O)=O)[CH](O)[CH]3O
ATS SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(C[As](=O)(O)O)O)O)O)N
ATS SMILES "OpenEye OEToolkits" 1.5.0 c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(C[As](=O)(O)O)O)O)O)N
ATS InChI InChI 1.03 InChI=1S/C11H18AsN5O12P2/c13-9-6-10(15-3-14-9)17(4-16-6)11-8(19)7(18)5(28-11)1-27-31(25,26)29-30(23,24)2-12(20,21)22/h3-5,7-8,11,18-19H,1-2H2,(H,23,24)(H,25,26)(H2,13,14,15)(H2,20,21,22)/t5-,7-,8-,11-/m1/s1
ATS InChIKey InChI 1.03 KHQOAQLQNLUEQN-IOSLPCCCSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ATS "SYSTEMATIC NAME" ACDLabs 10.04 "5'-O-[(S)-{[(R)-(arsonomethyl)(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]adenosine"
ATS "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-(arsonomethyl)phosphinic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ATS 'Create component' 2001-03-28 RCSB
ATS 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id ATS
_pdbe_chem_comp_drugbank_details.drugbank_id DB02937
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name "Gamma-Arsono-Beta, Gamma-Methyleneadenosine-5'-Diphosphate"
_pdbe_chem_comp_drugbank_details.description
'Adenylic acid. Adenine nucleotide containing one phosphate group esterified to the sugar moiety in the 2'-, 3'-, or 5'-position. [PubChem]'
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id ATS
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02937
_pdbe_chem_comp_drugbank_classification.parent 'Purine ribonucleoside monophosphates'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Purine nucleotides'
_pdbe_chem_comp_drugbank_classification.superclass 'Nucleosides, nucleotides, and analogues'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as purine ribonucleoside monophosphates. These are nucleotides consisting of a purine base linked to a ribose to which one monophosphate group is attached.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
ATS DB02937 'NH(3)-dependent NAD(+) synthetase' 'Escherichia coli (strain K12)' P18843 unknown 1
ATS DB02937 'Glycerol kinase' 'Escherichia coli (strain K12)' P0A6F3 unknown 2
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ATS AS1 As 8.660 7.728 1
ATS OG2 O 8.199 9.155 2
ATS OG3 O 10.088 8.189 3
ATS OG1 O 7.233 7.267 4
ATS PA P 7.571 2.647 5
ATS "O5'" O 8.032 1.220 6
ATS O11 O 8.998 3.108 7
ATS O13 O 7.110 4.075 8
ATS O12 O 6.144 2.186 9
ATS "C5'" C 7.027 0.107 10
ATS "C4'" C 7.487 -1.320 11
ATS "O4'" O 6.604 -2.532 12
ATS "C2'" C 8.911 -3.287 13
ATS "O2'" O 10.123 -4.170 14
ATS "C3'" C 8.913 -1.786 15
ATS "O3'" O 10.129 -0.907 16
ATS "C1'" C 7.483 -3.748 17
ATS N9 N 7.018 -5.173 18
ATS C4 C 5.598 -5.630 19
ATS N3 N 4.299 -4.880 20
ATS C2 C 3.000 -5.630 21
ATS N1 N 3.000 -7.130 22
ATS C6 C 4.299 -7.880 23
ATS N6 N 4.299 -9.380 24
ATS C5 C 5.598 -7.130 25
ATS N7 N 7.018 -7.588 26
ATS C8 C 7.893 -6.380 27
ATS PB P 8.116 5.188 28
ATS OB2 O 7.003 6.193 29
ATS C3B C 9.121 6.301 30
ATS OB1 O 9.229 4.182 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ATS AS1 OG2 SINGLE NONE 1
ATS AS1 OG3 SINGLE NONE 2
ATS AS1 OG1 DOUBLE NONE 3
ATS AS1 C3B SINGLE NONE 4
ATS PA "O5'" SINGLE NONE 5
ATS PA O11 SINGLE BEGINDASH 6
ATS PA O13 SINGLE NONE 7
ATS PA O12 DOUBLE NONE 8
ATS "O5'" "C5'" SINGLE NONE 9
ATS O13 PB SINGLE NONE 10
ATS "C4'" "C5'" SINGLE BEGINDASH 11
ATS "C4'" "O4'" SINGLE NONE 12
ATS "C4'" "C3'" SINGLE NONE 13
ATS "O4'" "C1'" SINGLE NONE 14
ATS "C2'" "O2'" SINGLE BEGINWEDGE 15
ATS "C2'" "C3'" SINGLE NONE 16
ATS "C2'" "C1'" SINGLE NONE 17
ATS "C3'" "O3'" SINGLE BEGINWEDGE 18
ATS "C1'" N9 SINGLE BEGINDASH 19
ATS N9 C4 SINGLE NONE 20
ATS N9 C8 SINGLE NONE 21
ATS C4 N3 DOUBLE NONE 22
ATS C4 C5 SINGLE NONE 23
ATS N3 C2 SINGLE NONE 24
ATS C2 N1 DOUBLE NONE 25
ATS N1 C6 SINGLE NONE 26
ATS C6 N6 SINGLE NONE 27
ATS C6 C5 DOUBLE NONE 28
ATS C5 N7 SINGLE NONE 29
ATS N7 C8 DOUBLE NONE 30
ATS PB OB2 DOUBLE NONE 31
ATS PB C3B SINGLE NONE 32
ATS PB OB1 SINGLE BEGINDASH 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ATS MurckoScaffold S1 scaffold 'c1ncc2ncn([C@H]3CCCO3)c2n1' InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1 DAKONNSVCLKUJN-MRVPVSSYSA-N
ATS adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
ATS imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
ATS phosphate F3 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
ATS purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
ATS pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
ATS ribose F6 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ATS "C4'" S1 1
ATS "O4'" S1 1
ATS "C2'" S1 1
ATS "C3'" S1 1
ATS "C1'" S1 1
ATS N9 S1 1
ATS C4 S1 1
ATS N3 S1 1
ATS C2 S1 1
ATS N1 S1 1
ATS C6 S1 1
ATS C5 S1 1
ATS N7 S1 1
ATS C8 S1 1
ATS N1 F1 1
ATS C6 F1 1
ATS C5 F1 1
ATS C4 F1 1
ATS N3 F1 1
ATS C2 F1 1
ATS N9 F1 1
ATS C8 F1 1
ATS N7 F1 1
ATS N6 F1 1
ATS C4 F2 1
ATS C5 F2 1
ATS N7 F2 1
ATS C8 F2 1
ATS N9 F2 1
ATS "O5'" F3 1
ATS PA F3 1
ATS O12 F3 1
ATS O11 F3 1
ATS O13 F3 1
ATS N7 F4 1
ATS C8 F4 1
ATS N9 F4 1
ATS C4 F4 1
ATS C5 F4 1
ATS C6 F4 1
ATS N1 F4 1
ATS C2 F4 1
ATS N3 F4 1
ATS C5 F5 1
ATS C4 F5 1
ATS N3 F5 1
ATS C2 F5 1
ATS N1 F5 1
ATS C6 F5 1
ATS "C2'" F6 1
ATS "C3'" F6 1
ATS "C4'" F6 1
ATS "O4'" F6 1
ATS "C1'" F6 1
ATS "C5'" F6 1
ATS "O5'" F6 1
ATS "O3'" F6 1
ATS "O2'" F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ATS
_pdbe_chem_comp_rdkit_properties.exactmw 548.964
_pdbe_chem_comp_rdkit_properties.amw 549.158
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 17
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 8
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 15
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 17
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 49
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 20
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.545
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 201.055
_pdbe_chem_comp_rdkit_properties.tpsa 269.900
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.569
_pdbe_chem_comp_rdkit_properties.CrippenMR 95.062
_pdbe_chem_comp_rdkit_properties.chi0v 17.642
_pdbe_chem_comp_rdkit_properties.chi1v 13.270
_pdbe_chem_comp_rdkit_properties.chi2v 8.468
_pdbe_chem_comp_rdkit_properties.chi3v 8.468
_pdbe_chem_comp_rdkit_properties.chi4v 6.293
_pdbe_chem_comp_rdkit_properties.chi0n 31.977
_pdbe_chem_comp_rdkit_properties.chi1n 15.374
_pdbe_chem_comp_rdkit_properties.chi2n 2.920
_pdbe_chem_comp_rdkit_properties.chi3n 2.920
_pdbe_chem_comp_rdkit_properties.chi4n 1.888
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.192
_pdbe_chem_comp_rdkit_properties.kappa1 9.972
_pdbe_chem_comp_rdkit_properties.kappa2 8.630
_pdbe_chem_comp_rdkit_properties.kappa3 5.788
_pdbe_chem_comp_rdkit_properties.Phi 2.776
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ATS UniChem DrugBank DB02937
ATS UniChem PDBe ATS
ATS UniChem PubChem 42626649
ATS UniChem Nikkaji J1.112.712F
ATS UniChem 'Probes And Drugs' PD059753
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ATS AS1 6.339 1.351 -2.355 ETKDGv3 1
ATS OG2 6.572 3.029 -1.641 ETKDGv3 2
ATS OG3 6.664 1.480 -4.161 ETKDGv3 3
ATS OG1 7.649 0.524 -1.801 ETKDGv3 4
ATS PA 3.015 -0.639 2.037 ETKDGv3 5
ATS "O5'" 1.454 -1.162 2.479 ETKDGv3 6
ATS O11 3.375 0.802 2.852 ETKDGv3 7
ATS O13 3.070 -0.426 0.348 ETKDGv3 8
ATS O12 4.007 -1.705 2.446 ETKDGv3 9
ATS "C5'" 0.535 -0.155 2.123 ETKDGv3 10
ATS "C4'" -0.888 -0.626 2.439 ETKDGv3 11
ATS "O4'" -1.805 0.403 2.141 ETKDGv3 12
ATS "C2'" -2.773 -1.708 1.503 ETKDGv3 13
ATS "O2'" -3.479 -2.389 2.516 ETKDGv3 14
ATS "C3'" -1.277 -1.866 1.643 ETKDGv3 15
ATS "O3'" -0.924 -3.040 2.329 ETKDGv3 16
ATS "C1'" -2.972 -0.191 1.610 ETKDGv3 17
ATS N9 -3.254 0.387 0.296 ETKDGv3 18
ATS C4 -4.491 0.348 -0.388 ETKDGv3 19
ATS N3 -5.656 0.029 0.084 ETKDGv3 20
ATS C2 -6.755 -0.059 -0.854 ETKDGv3 21
ATS N1 -6.549 0.117 -2.139 ETKDGv3 22
ATS C6 -5.229 0.407 -2.655 ETKDGv3 23
ATS N6 -5.004 0.517 -4.060 ETKDGv3 24
ATS C5 -4.241 0.532 -1.771 ETKDGv3 25
ATS N7 -2.841 0.664 -1.974 ETKDGv3 26
ATS C8 -2.310 0.569 -0.783 ETKDGv3 27
ATS PB 4.538 0.347 -0.035 ETKDGv3 28
ATS OB2 5.713 -0.423 0.526 ETKDGv3 29
ATS C3B 4.686 0.410 -1.843 ETKDGv3 30
ATS OB1 4.548 1.927 0.571 ETKDGv3 31
ATS HO2 5.751 3.521 -1.893 ETKDGv3 32
ATS HO3 7.480 2.037 -4.230 ETKDGv3 33
ATS HOB 3.264 0.585 3.812 ETKDGv3 34
ATS "H5'1" 0.729 0.770 2.712 ETKDGv3 35
ATS "H5'2" 0.598 0.086 1.037 ETKDGv3 36
ATS "H4'" -0.954 -0.842 3.530 ETKDGv3 37
ATS "H2'" -3.109 -2.103 0.519 ETKDGv3 38
ATS "HO2'" -3.189 -2.028 3.394 ETKDGv3 39
ATS "H3'" -0.804 -1.846 0.632 ETKDGv3 40
ATS "HO3'" -1.068 -3.789 1.694 ETKDGv3 41
ATS "H1'" -3.824 0.042 2.286 ETKDGv3 42
ATS H2 -7.750 -0.283 -0.495 ETKDGv3 43
ATS HN61 -5.799 0.399 -4.726 ETKDGv3 44
ATS HN62 -4.053 0.718 -4.442 ETKDGv3 45
ATS H8 -1.241 0.602 -0.628 ETKDGv3 46
ATS H3B1 4.707 -0.622 -2.250 ETKDGv3 47
ATS H3B2 3.814 0.952 -2.264 ETKDGv3 48
ATS HB1 3.733 2.346 0.195 ETKDGv3 49
#