data_AVF
#
_chem_comp.id AVF
_chem_comp.name "1-{2-[3-(2-Chloro-4,5-difluoro-benzoyl)-ureido]-4-fluoro-phenyl}-piperidine-4-carboxylic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H17 Cl F3 N3 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
"1-[2-({[(2-chloro-4,5-difluorophenyl)carbonyl]carbamoyl}amino)-4-fluorophenyl]piperidine-4-carboxylic acid"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2008-03-11
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 455.815
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code AVF
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3CEJ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AVF C1 C1 C 0 1 Y N N N N N 97.709 13.121 31.733 5.894 1.969 -0.266 C1 AVF 1
AVF C2 C2 C 0 1 Y N N N N N 98.782 12.549 32.375 4.610 2.349 -0.632 C2 AVF 2
AVF C3 C3 C 0 1 Y N N N N N 99.584 11.609 31.740 3.559 1.466 -0.490 C3 AVF 3
AVF C7 C7 C 0 1 N N N N N N 100.158 10.233 29.726 2.670 -0.762 0.176 C7 AVF 4
AVF C11 C11 C 0 1 N N N N N N 100.735 7.963 29.638 0.400 -1.262 -0.038 C11 AVF 5
AVF C13 C13 C 0 1 Y N N N N N 102.347 7.341 27.986 -1.889 -1.833 -0.358 C13 AVF 6
AVF C14 C14 C 0 1 Y N N N N N 102.045 5.981 28.141 -1.611 -3.187 -0.472 C14 AVF 7
AVF C15 C15 C 0 1 Y N N N N N 102.776 4.983 27.507 -2.641 -4.110 -0.437 C15 AVF 8
AVF C16 C16 C 0 1 Y N N N N N 103.836 5.343 26.685 -3.951 -3.686 -0.290 C16 AVF 9
AVF C24 C24 C 0 1 N N N N N N 102.755 9.826 26.268 -4.384 0.403 -1.171 C24 AVF 10
AVF C27 C27 C 0 1 N N N N N N 103.396 11.084 25.642 -4.558 1.922 -1.099 C27 AVF 11
AVF C28 C28 C 0 1 N N N N N N 104.314 11.861 26.616 -5.152 2.298 0.262 C28 AVF 12
AVF C29 C29 C 0 1 N N N N N N 105.030 13.063 25.911 -5.270 3.797 0.362 C29 AVF 13
AVF O31 O31 O 0 1 N N N N N N 104.595 13.431 24.796 -4.917 4.494 -0.560 O31 AVF 14
AVF O30 O30 O 0 1 N N N N N N 105.991 13.618 26.495 -5.768 4.358 1.475 O30 AVF 15
AVF C26 C26 C 0 1 N N N N N N 105.311 10.882 27.265 -4.231 1.782 1.372 C26 AVF 16
AVF C25 C25 C 0 1 N N N N N N 104.582 9.692 27.918 -4.066 0.268 1.228 C25 AVF 17
AVF N21 N21 N 0 1 N N N N N N 103.824 8.972 26.859 -3.495 -0.041 -0.089 N21 AVF 18
AVF C18 C18 C 0 1 Y N N N N N 103.419 7.704 27.141 -3.208 -1.407 -0.204 C18 AVF 19
AVF C17 C17 C 0 1 Y N N N N N 104.139 6.689 26.507 -4.235 -2.338 -0.176 C17 AVF 20
AVF F23 F23 F 0 1 N N N N N N 102.447 3.683 27.687 -2.368 -5.429 -0.548 F23 AVF 21
AVF N12 N12 N 0 1 N N N N N N 101.586 8.248 28.630 -0.847 -0.896 -0.392 N12 AVF 22
AVF O19 O19 O 0 1 N N N N N N 100.583 6.820 30.081 0.603 -2.375 0.409 O19 AVF 23
AVF N10 N10 N 0 1 N N N N N N 100.040 8.980 30.158 1.423 -0.395 -0.178 N10 AVF 24
AVF O20 O20 O 0 1 N N N N N N 100.906 10.596 28.824 2.873 -1.874 0.623 O20 AVF 25
AVF C4 C4 C 0 1 Y N N N N N 99.283 11.253 30.433 3.790 0.188 0.023 C4 AVF 26
AVF F22 F22 F 0 1 N N N N N N 99.020 12.931 33.632 4.389 3.587 -1.128 F22 AVF 27
AVF F9 F9 F 0 1 N N N N N N 96.979 14.015 32.412 6.919 2.837 -0.407 F9 AVF 28
AVF C6 C6 C 0 1 Y N N N N N 97.401 12.770 30.428 6.128 0.703 0.248 C6 AVF 29
AVF C5 C5 C 0 1 Y N N N N N 98.189 11.832 29.778 5.085 -0.190 0.389 C5 AVF 30
AVF CL8 CL8 CL 0 0 N N N N N N 97.760 11.425 28.159 5.381 -1.777 1.028 CL8 AVF 31
AVF H3 H3 H 0 1 N N N N N N 100.424 11.165 32.253 2.560 1.763 -0.775 H3 AVF 32
AVF H14 H14 H 0 1 N N N N N N 101.217 5.699 28.774 -0.590 -3.520 -0.587 H14 AVF 33
AVF H16 H16 H 0 1 N N N N N N 104.421 4.583 26.188 -4.752 -4.410 -0.264 H16 AVF 34
AVF H24 H24 H 0 1 N N N N N N 102.047 10.126 27.055 -5.355 -0.080 -1.064 H24 AVF 35
AVF H24A H24A H 0 0 N N N N N N 102.218 9.261 25.492 -3.948 0.133 -2.133 H24A AVF 36
AVF H27 H27 H 0 1 N N N N N N 104.002 10.767 24.780 -3.589 2.405 -1.220 H27 AVF 37
AVF H27A H27A H 0 0 N N N N N N 102.576 11.760 25.359 -5.231 2.249 -1.892 H27A AVF 38
AVF H28 H28 H 0 1 N N N N N N 103.698 12.308 27.410 -6.138 1.846 0.367 H28 AVF 39
AVF HO30 HO30 H 0 0 N N N N N N 106.314 14.335 25.962 -5.825 5.324 1.492 HO30 AVF 40
AVF H26 H26 H 0 1 N N N N N N 105.991 10.500 26.489 -3.257 2.264 1.289 H26 AVF 41
AVF H26A H26A H 0 0 N N N N N N 105.869 11.420 28.046 -4.670 2.010 2.343 H26A AVF 42
AVF H25 H25 H 0 1 N N N N N N 105.314 9.014 28.381 -3.400 -0.101 2.008 H25 AVF 43
AVF H25A H25A H 0 0 N N N N N N 103.895 10.051 28.699 -5.039 -0.214 1.324 H25A AVF 44
AVF H17 H17 H 0 1 N N N N N N 104.958 6.958 25.857 -5.258 -2.010 -0.062 H17 AVF 45
AVF HN12 HN12 H 0 0 N N N N N N 101.657 9.202 28.340 -1.024 0.016 -0.671 HN12 AVF 46
AVF HN10 HN10 H 0 0 N N N N N N 99.403 8.790 30.905 1.260 0.492 -0.535 HN10 AVF 47
AVF H6 H6 H 0 1 N N N N N N 96.559 13.221 29.924 7.128 0.412 0.530 H6 AVF 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AVF C1 C2 DOUB Y N 1
AVF C6 C1 SING Y N 2
AVF C1 F9 SING N N 3
AVF C2 C3 SING Y N 4
AVF C2 F22 SING N N 5
AVF C3 C4 DOUB Y N 6
AVF C3 H3 SING N N 7
AVF O20 C7 DOUB N N 8
AVF C7 N10 SING N N 9
AVF C7 C4 SING N N 10
AVF N12 C11 SING N N 11
AVF C11 O19 DOUB N N 12
AVF C11 N10 SING N N 13
AVF C18 C13 DOUB Y N 14
AVF C13 C14 SING Y N 15
AVF C13 N12 SING N N 16
AVF C15 C14 DOUB Y N 17
AVF C14 H14 SING N N 18
AVF C16 C15 SING Y N 19
AVF C15 F23 SING N N 20
AVF C17 C16 DOUB Y N 21
AVF C16 H16 SING N N 22
AVF C27 C24 SING N N 23
AVF C24 N21 SING N N 24
AVF C24 H24 SING N N 25
AVF C24 H24A SING N N 26
AVF C27 C28 SING N N 27
AVF C27 H27 SING N N 28
AVF C27 H27A SING N N 29
AVF C29 C28 SING N N 30
AVF C28 C26 SING N N 31
AVF C28 H28 SING N N 32
AVF O31 C29 DOUB N N 33
AVF C29 O30 SING N N 34
AVF O30 HO30 SING N N 35
AVF C26 C25 SING N N 36
AVF C26 H26 SING N N 37
AVF C26 H26A SING N N 38
AVF N21 C25 SING N N 39
AVF C25 H25 SING N N 40
AVF C25 H25A SING N N 41
AVF N21 C18 SING N N 42
AVF C17 C18 SING Y N 43
AVF C17 H17 SING N N 44
AVF N12 HN12 SING N N 45
AVF N10 HN10 SING N N 46
AVF C4 C5 SING Y N 47
AVF C6 C5 DOUB Y N 48
AVF C6 H6 SING N N 49
AVF CL8 C5 SING N N 50
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AVF SMILES ACDLabs 10.04 Fc1cc(c(Cl)cc1F)C(=O)NC(=O)Nc2cc(F)ccc2N3CCC(C(=O)O)CC3
AVF SMILES_CANONICAL CACTVS 3.341 OC(=O)C1CCN(CC1)c2ccc(F)cc2NC(=O)NC(=O)c3cc(F)c(F)cc3Cl
AVF SMILES CACTVS 3.341 OC(=O)C1CCN(CC1)c2ccc(F)cc2NC(=O)NC(=O)c3cc(F)c(F)cc3Cl
AVF SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1cc(c(cc1F)NC(=O)NC(=O)c2cc(c(cc2Cl)F)F)N3CCC(CC3)C(=O)O
AVF SMILES "OpenEye OEToolkits" 1.5.0 c1cc(c(cc1F)NC(=O)NC(=O)c2cc(c(cc2Cl)F)F)N3CCC(CC3)C(=O)O
AVF InChI InChI 1.03 InChI=1S/C20H17ClF3N3O4/c21-13-9-15(24)14(23)8-12(13)18(28)26-20(31)25-16-7-11(22)1-2-17(16)27-5-3-10(4-6-27)19(29)30/h1-2,7-10H,3-6H2,(H,29,30)(H2,25,26,28,31)
AVF InChIKey InChI 1.03 KAJJGOCSAXKXBD-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AVF "SYSTEMATIC NAME" ACDLabs 10.04 "1-[2-({[(2-chloro-4,5-difluorophenyl)carbonyl]carbamoyl}amino)-4-fluorophenyl]piperidine-4-carboxylic acid"
AVF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "1-[2-[(2-chloro-4,5-difluoro-phenyl)carbonylcarbamoylamino]-4-fluoro-phenyl]piperidine-4-carboxylic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AVF 'Create component' 2008-03-11 RCSB
AVF 'Modify aromatic_flag' 2011-06-04 RCSB
AVF 'Modify descriptor' 2011-06-04 RCSB
AVF 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id AVF
_pdbx_chem_comp_synonyms.name
"1-[2-({[(2-chloro-4,5-difluorophenyl)carbonyl]carbamoyl}amino)-4-fluorophenyl]piperidine-4-carboxylic acid"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id AVF
_pdbe_chem_comp_drugbank_details.drugbank_id DB07396
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name AVE-2865
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 648917-13-9
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id AVF
_pdbe_chem_comp_synonyms.name
'1-[2-({[(2-chloro-4,5-difluorophenyl)carbonyl]carbamoyl}amino)-4-fluorophenyl]piperidine-4-carboxylic acid'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id AVF
_pdbe_chem_comp_drugbank_classification.drugbank_id DB07396
_pdbe_chem_comp_drugbank_classification.parent "N-benzoyl-N'-phenylureas"
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Benzene and substituted derivatives'
_pdbe_chem_comp_drugbank_classification.superclass Benzenoids
_pdbe_chem_comp_drugbank_classification.description
"This compound belongs to the class of organic compounds known as n-benzoyl-n'-phenylureas. These are n-acyl-phenylureas that have the acyl group substituted by a phenyl group."
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
AVF C1 C 14.198 5.250 1
AVF C2 C 12.899 4.500 2
AVF C3 C 12.899 3.000 3
AVF C7 C 14.198 0.750 4
AVF C11 C 12.899 -1.500 5
AVF C13 C 11.600 -3.750 6
AVF C14 C 12.899 -4.500 7
AVF C15 C 12.899 -6.000 8
AVF C16 C 11.600 -6.750 9
AVF C24 C 9.002 -2.250 10
AVF C27 C 7.702 -1.500 11
AVF C28 C 6.404 -2.250 12
AVF C29 C 5.104 -1.500 13
AVF O31 O 3.805 -2.250 14
AVF O30 O 5.104 0.000 15
AVF C26 C 6.404 -3.750 16
AVF C25 C 7.702 -4.500 17
AVF N21 N 9.002 -3.750 18
AVF C18 C 10.301 -4.500 19
AVF C17 C 10.301 -6.000 20
AVF F23 F 14.198 -6.750 21
AVF N12 N 11.600 -2.250 22
AVF O19 O 14.198 -2.250 23
AVF N10 N 12.899 0.000 24
AVF O20 O 15.497 0.000 25
AVF C4 C 14.198 2.250 26
AVF F22 F 11.600 5.250 27
AVF F9 F 14.198 6.750 28
AVF C6 C 15.497 4.500 29
AVF C5 C 15.497 3.000 30
AVF CL8 Cl 16.796 2.250 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
AVF C1 C2 DOUBLE NONE 1
AVF C6 C1 SINGLE NONE 2
AVF C1 F9 SINGLE NONE 3
AVF C2 C3 SINGLE NONE 4
AVF C2 F22 SINGLE NONE 5
AVF C3 C4 DOUBLE NONE 6
AVF O20 C7 DOUBLE NONE 7
AVF C7 N10 SINGLE NONE 8
AVF C7 C4 SINGLE NONE 9
AVF N12 C11 SINGLE NONE 10
AVF C11 O19 DOUBLE NONE 11
AVF C11 N10 SINGLE NONE 12
AVF C18 C13 SINGLE NONE 13
AVF C13 C14 DOUBLE NONE 14
AVF C13 N12 SINGLE NONE 15
AVF C15 C14 SINGLE NONE 16
AVF C16 C15 DOUBLE NONE 17
AVF C15 F23 SINGLE NONE 18
AVF C17 C16 SINGLE NONE 19
AVF C27 C24 SINGLE NONE 20
AVF C24 N21 SINGLE NONE 21
AVF C27 C28 SINGLE NONE 22
AVF C29 C28 SINGLE NONE 23
AVF C28 C26 SINGLE NONE 24
AVF O31 C29 DOUBLE NONE 25
AVF C29 O30 SINGLE NONE 26
AVF C26 C25 SINGLE NONE 27
AVF N21 C25 SINGLE NONE 28
AVF N21 C18 SINGLE NONE 29
AVF C17 C18 DOUBLE NONE 30
AVF C4 C5 SINGLE NONE 31
AVF C6 C5 DOUBLE NONE 32
AVF CL8 C5 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
AVF MurckoScaffold S1 scaffold O=C(NC(=O)c1ccccc1)Nc1ccccc1N1CCCCC1 InChI=1S/C19H21N3O2/c23-18(15-9-3-1-4-10-15)21-19(24)20-16-11-5-6-12-17(16)22-13-7-2-8-14-22/h1,3-6,9-12H,2,7-8,13-14H2,(H2,20,21,23,24) PHZQHLLAFDRDLK-UHFFFAOYSA-N
AVF amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
AVF phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
AVF Z44609285 F3 fragment O=C(NCc1ccc(F)cc1)Nc1ccccc1 InChI=1S/C14H13FN2O/c15-12-8-6-11(7-9-12)10-16-14(18)17-13-4-2-1-3-5-13/h1-9H,10H2,(H2,16,17,18) ZDWVEMVCZLWPFQ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
AVF C1 S1 1
AVF C2 S1 1
AVF C3 S1 1
AVF C7 S1 1
AVF C11 S1 1
AVF C13 S1 1
AVF C14 S1 1
AVF C15 S1 1
AVF C16 S1 1
AVF C24 S1 1
AVF C27 S1 1
AVF C28 S1 1
AVF C26 S1 1
AVF C25 S1 1
AVF N21 S1 1
AVF C18 S1 1
AVF C17 S1 1
AVF N12 S1 1
AVF O19 S1 1
AVF N10 S1 1
AVF O20 S1 1
AVF C4 S1 1
AVF C6 S1 1
AVF C5 S1 1
AVF N10 F1 1
AVF C7 F1 1
AVF O20 F1 1
AVF C4 F1 1
AVF C1 F2 1
AVF C2 F2 1
AVF C3 F2 1
AVF C4 F2 1
AVF C5 F2 1
AVF C6 F2 1
AVF C13 F2 2
AVF C18 F2 2
AVF C17 F2 2
AVF C16 F2 2
AVF C15 F2 2
AVF C14 F2 2
AVF F9 F3 1
AVF C1 F3 1
AVF C2 F3 1
AVF C3 F3 1
AVF C4 F3 1
AVF C7 F3 1
AVF N10 F3 1
AVF C11 F3 1
AVF O19 F3 1
AVF N12 F3 1
AVF C13 F3 1
AVF C18 F3 1
AVF C17 F3 1
AVF C16 F3 1
AVF C15 F3 1
AVF C14 F3 1
AVF C5 F3 1
AVF C6 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id AVF
_pdbe_chem_comp_rdkit_properties.exactmw 455.086
_pdbe_chem_comp_rdkit_properties.amw 455.820
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.250
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 203.428
_pdbe_chem_comp_rdkit_properties.tpsa 98.740
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.204
_pdbe_chem_comp_rdkit_properties.CrippenMR 104.912
_pdbe_chem_comp_rdkit_properties.chi0v 15.242
_pdbe_chem_comp_rdkit_properties.chi1v 8.016
_pdbe_chem_comp_rdkit_properties.chi2v 3.525
_pdbe_chem_comp_rdkit_properties.chi3v 3.525
_pdbe_chem_comp_rdkit_properties.chi4v 2.162
_pdbe_chem_comp_rdkit_properties.chi0n 31.486
_pdbe_chem_comp_rdkit_properties.chi1n 15.940
_pdbe_chem_comp_rdkit_properties.chi2n 3.241
_pdbe_chem_comp_rdkit_properties.chi3n 3.241
_pdbe_chem_comp_rdkit_properties.chi4n 1.951
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.270
_pdbe_chem_comp_rdkit_properties.kappa1 9.073
_pdbe_chem_comp_rdkit_properties.kappa2 9.254
_pdbe_chem_comp_rdkit_properties.kappa3 5.263
_pdbe_chem_comp_rdkit_properties.Phi 2.708
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
AVF UniChem ChEMBL CHEMBL1231099
AVF UniChem DrugBank DB07396
AVF UniChem PDBe AVF
AVF UniChem ZINC ZINC000053683030
AVF UniChem fdasrs 6O70DED99N
AVF UniChem SureChEMBL SCHEMBL5433414
AVF UniChem ACTor 648917-13-9
AVF UniChem 'EPA CompTox Dashboard' DTXSID5047376
AVF UniChem BRENDA 26914
AVF UniChem 'Probes And Drugs' PD005291
AVF UniChem PubChem 12148754
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
AVF C1 -2.960 -4.953 2.140 ETKDGv3 1
AVF C2 -2.454 -4.542 0.973 ETKDGv3 2
AVF C3 -2.098 -3.122 0.780 ETKDGv3 3
AVF C7 -1.873 -0.814 1.571 ETKDGv3 4
AVF C11 -1.464 1.097 -0.047 ETKDGv3 5
AVF C13 -0.774 2.683 -1.872 ETKDGv3 6
AVF C14 -1.385 3.680 -2.532 ETKDGv3 7
AVF C15 -0.625 4.873 -2.957 ETKDGv3 8
AVF C16 0.683 4.962 -2.693 ETKDGv3 9
AVF C24 1.378 0.337 -1.805 ETKDGv3 10
AVF C27 2.638 -0.489 -1.518 ETKDGv3 11
AVF C28 2.899 -0.674 -0.001 ETKDGv3 12
AVF C29 2.324 -1.972 0.499 ETKDGv3 13
AVF O31 1.105 -2.240 0.320 ETKDGv3 14
AVF O30 3.135 -2.870 1.185 ETKDGv3 15
AVF C26 2.390 0.508 0.861 ETKDGv3 16
AVF C25 2.307 1.808 0.059 ETKDGv3 17
AVF N21 1.417 1.625 -1.096 ETKDGv3 18
AVF C18 0.702 2.752 -1.635 ETKDGv3 19
AVF C17 1.378 3.852 -2.013 ETKDGv3 20
AVF F23 -1.260 5.885 -3.597 ETKDGv3 21
AVF N12 -1.554 1.578 -1.394 ETKDGv3 22
AVF O19 -0.901 1.800 0.836 ETKDGv3 23
AVF N10 -2.023 -0.183 0.287 ETKDGv3 24
AVF O20 -1.384 -0.170 2.538 ETKDGv3 25
AVF C4 -2.279 -2.226 1.770 ETKDGv3 26
AVF F22 -2.256 -5.428 -0.035 ETKDGv3 27
AVF F9 -3.285 -6.257 2.323 ETKDGv3 28
AVF C6 -3.174 -3.985 3.233 ETKDGv3 29
AVF C5 -2.857 -2.693 3.068 ETKDGv3 30
AVF CL8 -3.200 -1.576 4.386 ETKDGv3 31
AVF H3 -1.656 -2.830 -0.165 ETKDGv3 32
AVF H14 -2.451 3.640 -2.718 ETKDGv3 33
AVF H16 1.241 5.838 -2.997 ETKDGv3 34
AVF H24 1.316 0.511 -2.902 ETKDGv3 35
AVF H24A 0.481 -0.237 -1.495 ETKDGv3 36
AVF H27 3.505 0.044 -1.967 ETKDGv3 37
AVF H27A 2.567 -1.472 -2.034 ETKDGv3 38
AVF H28 4.004 -0.731 0.128 ETKDGv3 39
AVF HO30 2.762 -3.743 1.537 ETKDGv3 40
AVF H26 1.375 0.290 1.262 ETKDGv3 41
AVF H26A 3.065 0.653 1.733 ETKDGv3 42
AVF H25 1.915 2.612 0.719 ETKDGv3 43
AVF H25A 3.320 2.103 -0.292 ETKDGv3 44
AVF H17 2.449 3.915 -1.870 ETKDGv3 45
AVF HN12 -2.290 1.176 -2.018 ETKDGv3 46
AVF HN10 -2.546 -0.689 -0.463 ETKDGv3 47
AVF H6 -3.603 -4.329 4.166 ETKDGv3 48
#