data_B5S
#
_chem_comp.id B5S
_chem_comp.name 3-{5-[(3-hydroxy-5-methoxyphenyl)amino]-2-(phenylcarbamoyl)phenoxy}propan-1-aminium
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H26 N3 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2014-05-21
_chem_comp.pdbx_modified_date 2014-10-03
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 408.470
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code B5S
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4umq
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
B5S C1 C1 C 0 1 N N N N N N 34.418 20.428 19.413 5.800 -2.904 -2.270 C1 B5S 1
B5S O2 O2 O 0 1 N N N N N N 33.571 19.520 18.717 4.646 -2.136 -1.923 O2 B5S 2
B5S C3 C3 C 0 1 Y N N N N N 32.283 19.913 18.462 4.793 -1.212 -0.937 C3 B5S 3
B5S C4 C4 C 0 1 Y N N N N N 31.779 21.177 18.730 6.023 -1.050 -0.317 C4 B5S 4
B5S C5 C5 C 0 1 Y N N N N N 30.455 21.469 18.432 6.174 -0.107 0.689 C5 B5S 5
B5S O6 O6 O 0 1 N N N N N N 29.948 22.710 18.692 7.379 0.052 1.296 O6 B5S 6
B5S C7 C7 C 0 1 Y N N N N N 29.637 20.498 17.866 5.095 0.673 1.076 C7 B5S 7
B5S C8 C8 C 0 1 Y N N N N N 30.131 19.224 17.592 3.864 0.511 0.455 C8 B5S 8
B5S N9 N9 N 0 1 N N N N N N 29.256 18.269 17.015 2.776 1.298 0.844 N9 B5S 9
B5S C10 C10 C 0 1 Y N N N N N 29.456 17.097 16.250 1.481 0.808 0.712 C10 B5S 10
B5S C11 C11 C 0 1 Y N N N N N 30.662 16.792 15.623 1.236 -0.556 0.863 C11 B5S 11
B5S C12 C12 C 0 1 Y N N N N N 30.798 15.629 14.886 -0.032 -1.047 0.735 C12 B5S 12
B5S C13 C13 C 0 1 Y N N N N N 29.729 14.741 14.756 -1.094 -0.182 0.452 C13 B5S 13
B5S C14 C14 C 0 1 N N N N N N 29.938 13.493 13.941 -2.461 -0.712 0.315 C14 B5S 14
B5S O15 O15 O 0 1 N N N N N N 31.022 13.261 13.402 -3.383 0.042 0.069 O15 B5S 15
B5S N16 N16 N 0 1 N N N N N N 28.860 12.665 13.851 -2.690 -2.032 0.462 N16 B5S 16
B5S C17 C17 C 0 1 Y N N N N N 28.617 11.529 13.038 -3.967 -2.550 0.226 C17 B5S 17
B5S C18 C18 C 0 1 Y N N N N N 27.396 10.890 13.227 -4.777 -1.988 -0.752 C18 B5S 18
B5S C19 C19 C 0 1 Y N N N N N 27.069 9.777 12.482 -6.038 -2.502 -0.982 C19 B5S 19
B5S C20 C20 C 0 1 Y N N N N N 27.948 9.290 11.547 -6.495 -3.576 -0.240 C20 B5S 20
B5S C21 C21 C 0 1 Y N N N N N 29.162 9.912 11.348 -5.691 -4.137 0.736 C21 B5S 21
B5S C22 C22 C 0 1 Y N N N N N 29.502 11.029 12.089 -4.427 -3.632 0.967 C22 B5S 22
B5S C23 C23 C 0 1 Y N N N N N 28.512 15.049 15.388 -0.852 1.192 0.300 C23 B5S 23
B5S O24 O24 O 0 1 N N N N N N 27.510 14.127 15.213 -1.877 2.039 0.025 O24 B5S 24
B5S C25 C25 C 0 1 N N N N N N 26.151 14.515 15.483 -1.554 3.423 -0.116 C25 B5S 25
B5S C26 C26 C 0 1 N N N N N N 25.812 14.152 16.920 -2.827 4.215 -0.421 C26 B5S 26
B5S C27 C27 C 0 1 N N N N N N 25.111 15.266 17.685 -2.482 5.698 -0.573 C27 B5S 27
B5S N28 N28 N 1 1 N N N N N N 23.969 15.825 16.919 -3.704 6.458 -0.866 N28 B5S 28
B5S C32 C32 C 0 1 Y N N N N N 28.388 16.216 16.123 0.435 1.681 0.437 C32 B5S 29
B5S C33 C33 C 0 1 Y N N N N N 31.462 18.945 17.896 3.715 -0.429 -0.555 C33 B5S 30
B5S HN28 HN28 H 0 0 N N N N N N 23.534 16.552 17.451 -4.114 6.119 -1.724 HN28 B5S 31
B5S HN2A HN2A H 0 0 N N N N N N 24.300 16.199 16.052 -4.363 6.341 -0.110 HN2A B5S 32
B5S HN2B HN2B H 0 0 N N N N N N 23.303 15.101 16.737 -3.477 7.436 -0.966 HN2B B5S 33
B5S H1 H1 H 0 1 N N N N N N 35.413 19.976 19.543 6.593 -2.237 -2.609 H1 B5S 34
B5S H1A H1A H 0 1 N N N N N N 34.511 21.359 18.835 6.143 -3.460 -1.397 H1A B5S 35
B5S H1B H1B H 0 1 N N N N N N 33.985 20.651 20.399 5.547 -3.602 -3.068 H1B B5S 36
B5S H4 H4 H 0 1 N N N N N N 32.415 21.932 19.169 6.863 -1.658 -0.618 H4 B5S 37
B5S HO6 HO6 H 0 1 N N N N N N 29.035 22.741 18.430 7.951 0.704 0.870 HO6 B5S 38
B5S H7 H7 H 0 1 N N N N N N 28.608 20.733 17.636 5.213 1.407 1.859 H7 B5S 39
B5S HN9 HN9 H 0 1 N N N N N N 28.291 18.467 17.186 2.924 2.185 1.206 HN9 B5S 40
B5S H11 H11 H 0 1 N N N N N N 31.498 17.469 15.713 2.053 -1.228 1.081 H11 B5S 41
B5S H12 H12 H 0 1 N N N N N N 31.740 15.406 14.407 -0.214 -2.105 0.853 H12 B5S 42
B5S HN16 HN16 H 0 0 N N N N N N 28.108 12.900 14.467 -1.969 -2.622 0.732 HN16 B5S 43
B5S H18 H18 H 0 1 N N N N N N 26.700 11.268 13.962 -4.421 -1.149 -1.332 H18 B5S 44
B5S H19 H19 H 0 1 N N N N N N 26.119 9.287 12.634 -6.668 -2.065 -1.743 H19 B5S 45
B5S H20 H20 H 0 1 N N N N N N 27.688 8.418 10.966 -7.481 -3.976 -0.422 H20 B5S 46
B5S H21 H21 H 0 1 N N N N N N 29.850 9.526 10.611 -6.051 -4.975 1.314 H21 B5S 47
B5S H22 H22 H 0 1 N N N N N N 30.454 11.513 11.931 -3.798 -4.074 1.725 H22 B5S 48
B5S H25 H25 H 0 1 N N N N N N 26.041 15.600 15.341 -1.112 3.790 0.811 H25 B5S 49
B5S H25A H25A H 0 0 N N N N N N 25.473 13.985 14.798 -0.843 3.549 -0.933 H25A B5S 50
B5S H26 H26 H 0 1 N N N N N N 25.154 13.271 16.909 -3.270 3.849 -1.348 H26 B5S 51
B5S H26A H26A H 0 0 N N N N N N 26.746 13.905 17.445 -3.538 4.089 0.395 H26A B5S 52
B5S H27 H27 H 0 1 N N N N N N 24.738 14.863 18.638 -2.040 6.064 0.354 H27 B5S 53
B5S H27A H27A H 0 0 N N N N N N 25.834 16.071 17.885 -1.771 5.824 -1.389 H27A B5S 54
B5S H32 H32 H 0 1 N N N N N N 27.449 16.445 16.604 0.627 2.737 0.326 H32 B5S 55
B5S H33 H33 H 0 1 N N N N N N 31.861 17.963 17.689 2.758 -0.553 -1.041 H33 B5S 56
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
B5S C1 O2 SING N N 1
B5S C1 H1 SING N N 2
B5S C1 H1A SING N N 3
B5S C1 H1B SING N N 4
B5S O2 C3 SING N N 5
B5S C3 C4 DOUB Y N 6
B5S C3 C33 SING Y N 7
B5S C4 C5 SING Y N 8
B5S C4 H4 SING N N 9
B5S C5 O6 SING N N 10
B5S C5 C7 DOUB Y N 11
B5S O6 HO6 SING N N 12
B5S C7 C8 SING Y N 13
B5S C7 H7 SING N N 14
B5S C8 N9 SING N N 15
B5S C8 C33 DOUB Y N 16
B5S N9 C10 SING N N 17
B5S N9 HN9 SING N N 18
B5S C10 C11 DOUB Y N 19
B5S C10 C32 SING Y N 20
B5S C11 C12 SING Y N 21
B5S C11 H11 SING N N 22
B5S C12 C13 DOUB Y N 23
B5S C12 H12 SING N N 24
B5S C13 C14 SING N N 25
B5S C13 C23 SING Y N 26
B5S C14 O15 DOUB N N 27
B5S C14 N16 SING N N 28
B5S N16 C17 SING N N 29
B5S N16 HN16 SING N N 30
B5S C17 C18 DOUB Y N 31
B5S C17 C22 SING Y N 32
B5S C18 C19 SING Y N 33
B5S C18 H18 SING N N 34
B5S C19 C20 DOUB Y N 35
B5S C19 H19 SING N N 36
B5S C20 C21 SING Y N 37
B5S C20 H20 SING N N 38
B5S C21 C22 DOUB Y N 39
B5S C21 H21 SING N N 40
B5S C22 H22 SING N N 41
B5S C23 O24 SING N N 42
B5S C23 C32 DOUB Y N 43
B5S O24 C25 SING N N 44
B5S C25 C26 SING N N 45
B5S C25 H25 SING N N 46
B5S C25 H25A SING N N 47
B5S C26 C27 SING N N 48
B5S C26 H26 SING N N 49
B5S C26 H26A SING N N 50
B5S C27 N28 SING N N 51
B5S C27 H27 SING N N 52
B5S C27 H27A SING N N 53
B5S N28 HN28 SING N N 54
B5S N28 HN2A SING N N 55
B5S N28 HN2B SING N N 56
B5S C32 H32 SING N N 57
B5S C33 H33 SING N N 58
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
B5S SMILES ACDLabs 12.01 O=C(Nc1ccccc1)c2ccc(cc2OCCC[NH3+])Nc3cc(O)cc(OC)c3
B5S InChI InChI 1.03 InChI=1S/C23H25N3O4/c1-29-20-13-18(12-19(27)15-20)25-17-8-9-21(22(14-17)30-11-5-10-24)23(28)26-16-6-3-2-4-7-16/h2-4,6-9,12-15,25,27H,5,10-11,24H2,1H3,(H,26,28)/p+1
B5S InChIKey InChI 1.03 TUABKEMVLJKHPG-UHFFFAOYSA-O
B5S SMILES_CANONICAL CACTVS 3.385 COc1cc(O)cc(Nc2ccc(C(=O)Nc3ccccc3)c(OCCC[NH3+])c2)c1
B5S SMILES CACTVS 3.385 COc1cc(O)cc(Nc2ccc(C(=O)Nc3ccccc3)c(OCCC[NH3+])c2)c1
B5S SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 COc1cc(cc(c1)O)Nc2ccc(c(c2)OCCC[NH3+])C(=O)Nc3ccccc3
B5S SMILES "OpenEye OEToolkits" 1.7.6 COc1cc(cc(c1)O)Nc2ccc(c(c2)OCCC[NH3+])C(=O)Nc3ccccc3
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
B5S "SYSTEMATIC NAME" ACDLabs 12.01 3-{5-[(3-hydroxy-5-methoxyphenyl)amino]-2-(phenylcarbamoyl)phenoxy}propan-1-aminium
B5S "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 3-[5-[(3-methoxy-5-oxidanyl-phenyl)amino]-2-(phenylcarbamoyl)phenoxy]propylazanium
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
B5S 'Create component' 2014-05-21 EBI
B5S 'Initial release' 2014-10-08 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
B5S C1 C 15.497 -8.250 1
B5S O2 O 14.198 -7.500 2
B5S C3 C 14.198 -6.000 3
B5S C4 C 15.497 -5.250 4
B5S C5 C 15.497 -3.750 5
B5S O6 O 16.796 -3.000 6
B5S C7 C 14.198 -3.000 7
B5S C8 C 12.899 -3.750 8
B5S N9 N 11.600 -3.000 9
B5S C10 C 11.600 -1.500 10
B5S C11 C 12.899 -0.750 11
B5S C12 C 12.899 0.750 12
B5S C13 C 11.600 1.500 13
B5S C14 C 11.600 3.000 14
B5S O15 O 10.301 3.750 15
B5S N16 N 12.899 3.750 16
B5S C17 C 12.899 5.250 17
B5S C18 C 14.198 6.000 18
B5S C19 C 14.198 7.500 19
B5S C20 C 12.899 8.250 20
B5S C21 C 11.600 7.500 21
B5S C22 C 11.600 6.000 22
B5S C23 C 10.301 0.750 23
B5S O24 O 9.002 1.500 24
B5S C25 C 7.702 0.750 25
B5S C26 C 6.404 1.500 26
B5S C27 C 5.104 0.750 27
B5S N28 N 3.805 1.500 28
B5S C32 C 10.301 -0.750 29
B5S C33 C 12.899 -5.250 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
B5S C1 O2 SINGLE NONE 1
B5S O2 C3 SINGLE NONE 2
B5S C3 C4 DOUBLE NONE 3
B5S C3 C33 SINGLE NONE 4
B5S C4 C5 SINGLE NONE 5
B5S C5 O6 SINGLE NONE 6
B5S C5 C7 DOUBLE NONE 7
B5S C7 C8 SINGLE NONE 8
B5S C8 N9 SINGLE NONE 9
B5S C8 C33 DOUBLE NONE 10
B5S N9 C10 SINGLE NONE 11
B5S C10 C11 DOUBLE NONE 12
B5S C10 C32 SINGLE NONE 13
B5S C11 C12 SINGLE NONE 14
B5S C12 C13 DOUBLE NONE 15
B5S C13 C14 SINGLE NONE 16
B5S C13 C23 SINGLE NONE 17
B5S C14 O15 DOUBLE NONE 18
B5S C14 N16 SINGLE NONE 19
B5S N16 C17 SINGLE NONE 20
B5S C17 C18 DOUBLE NONE 21
B5S C17 C22 SINGLE NONE 22
B5S C18 C19 SINGLE NONE 23
B5S C19 C20 DOUBLE NONE 24
B5S C20 C21 SINGLE NONE 25
B5S C21 C22 DOUBLE NONE 26
B5S C23 O24 SINGLE NONE 27
B5S C23 C32 DOUBLE NONE 28
B5S O24 C25 SINGLE NONE 29
B5S C25 C26 SINGLE NONE 30
B5S C26 C27 SINGLE NONE 31
B5S C27 N28 SINGLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
B5S MurckoScaffold S1 scaffold O=C(Nc1ccccc1)c1ccc(Nc2ccccc2)cc1 InChI=1S/C19H16N2O/c22-19(21-17-9-5-2-6-10-17)15-11-13-18(14-12-15)20-16-7-3-1-4-8-16/h1-14,20H,(H,21,22) XNWGZSBXNPXOTK-UHFFFAOYSA-N
B5S amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
B5S phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
B5S C3 S1 1
B5S C4 S1 1
B5S C5 S1 1
B5S C7 S1 1
B5S C8 S1 1
B5S N9 S1 1
B5S C10 S1 1
B5S C11 S1 1
B5S C12 S1 1
B5S C13 S1 1
B5S C14 S1 1
B5S O15 S1 1
B5S N16 S1 1
B5S C17 S1 1
B5S C18 S1 1
B5S C19 S1 1
B5S C20 S1 1
B5S C21 S1 1
B5S C22 S1 1
B5S C23 S1 1
B5S C32 S1 1
B5S C33 S1 1
B5S N16 F1 1
B5S C14 F1 1
B5S O15 F1 1
B5S C13 F1 1
B5S C3 F2 1
B5S C4 F2 1
B5S C5 F2 1
B5S C7 F2 1
B5S C8 F2 1
B5S C33 F2 1
B5S C10 F2 2
B5S C11 F2 2
B5S C12 F2 2
B5S C13 F2 2
B5S C23 F2 2
B5S C32 F2 2
B5S C17 F2 3
B5S C18 F2 3
B5S C19 F2 3
B5S C20 F2 3
B5S C21 F2 3
B5S C22 F2 3
#
_pdbe_chem_comp_rdkit_properties.comp_id B5S
_pdbe_chem_comp_rdkit_properties.exactmw 408.192
_pdbe_chem_comp_rdkit_properties.amw 408.478
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 56
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.174
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 211.899
_pdbe_chem_comp_rdkit_properties.tpsa 107.460
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.824
_pdbe_chem_comp_rdkit_properties.CrippenMR 112.078
_pdbe_chem_comp_rdkit_properties.chi0v 14.475
_pdbe_chem_comp_rdkit_properties.chi1v 7.593
_pdbe_chem_comp_rdkit_properties.chi2v 2.956
_pdbe_chem_comp_rdkit_properties.chi3v 2.956
_pdbe_chem_comp_rdkit_properties.chi4v 1.850
_pdbe_chem_comp_rdkit_properties.chi0n 40.475
_pdbe_chem_comp_rdkit_properties.chi1n 20.237
_pdbe_chem_comp_rdkit_properties.chi2n 2.956
_pdbe_chem_comp_rdkit_properties.chi3n 2.956
_pdbe_chem_comp_rdkit_properties.chi4n 1.850
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.710
_pdbe_chem_comp_rdkit_properties.kappa1 5.705
_pdbe_chem_comp_rdkit_properties.kappa2 10.177
_pdbe_chem_comp_rdkit_properties.kappa3 5.650
_pdbe_chem_comp_rdkit_properties.Phi 1.935
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
B5S UniChem PDBe B5S
B5S UniChem PubChem 78350470
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
B5S C1 8.920 -0.720 -0.674 ETKDGv3 1
B5S O2 7.551 -1.084 -0.827 ETKDGv3 2
B5S C3 6.472 -0.405 -0.239 ETKDGv3 3
B5S C4 6.635 0.681 0.543 ETKDGv3 4
B5S C5 5.463 1.350 1.144 ETKDGv3 5
B5S O6 5.659 2.458 1.968 ETKDGv3 6
B5S C7 4.229 0.886 0.899 ETKDGv3 7
B5S C8 4.032 -0.293 0.018 ETKDGv3 8
B5S N9 2.717 -0.820 -0.236 ETKDGv3 9
B5S C10 1.516 -0.031 -0.246 ETKDGv3 10
B5S C11 1.511 1.230 -0.709 ETKDGv3 11
B5S C12 0.260 2.009 -0.735 ETKDGv3 12
B5S C13 -0.897 1.466 -0.313 ETKDGv3 13
B5S C14 -2.139 2.275 -0.327 ETKDGv3 14
B5S O15 -2.274 3.195 -1.180 ETKDGv3 15
B5S N16 -3.157 2.065 0.663 ETKDGv3 16
B5S C17 -4.532 2.449 0.485 ETKDGv3 17
B5S C18 -5.293 2.716 1.561 ETKDGv3 18
B5S C19 -6.712 3.096 1.399 ETKDGv3 19
B5S C20 -7.255 3.157 0.178 ETKDGv3 20
B5S C21 -6.438 2.836 -1.009 ETKDGv3 21
B5S C22 -5.150 2.497 -0.868 ETKDGv3 22
B5S C23 -0.916 0.042 0.137 ETKDGv3 23
B5S O24 -2.149 -0.536 0.493 ETKDGv3 24
B5S C25 -2.379 -1.908 0.816 ETKDGv3 25
B5S C26 -2.368 -2.769 -0.450 ETKDGv3 26
B5S C27 -2.633 -4.243 -0.117 ETKDGv3 27
B5S N28 -2.626 -5.062 -1.329 ETKDGv3 28
B5S C32 0.241 -0.652 0.175 ETKDGv3 29
B5S C33 5.107 -0.912 -0.498 ETKDGv3 30
B5S HN28 -1.693 -5.001 -1.799 ETKDGv3 31
B5S HN2A -3.374 -4.739 -1.985 ETKDGv3 32
B5S HN2B -2.810 -6.058 -1.070 ETKDGv3 33
B5S H1 9.550 -1.430 -1.247 ETKDGv3 34
B5S H1A 9.089 0.304 -1.069 ETKDGv3 35
B5S H1B 9.211 -0.771 0.397 ETKDGv3 36
B5S H4 7.618 1.079 0.754 ETKDGv3 37
B5S HO6 4.883 2.945 2.401 ETKDGv3 38
B5S H7 3.374 1.364 1.361 ETKDGv3 39
B5S HN9 2.621 -1.849 -0.396 ETKDGv3 40
B5S H11 2.418 1.689 -1.079 ETKDGv3 41
B5S H12 0.300 3.035 -1.080 ETKDGv3 42
B5S HN16 -2.863 1.682 1.590 ETKDGv3 43
B5S H18 -4.872 2.669 2.558 ETKDGv3 44
B5S H19 -7.311 3.324 2.271 ETKDGv3 45
B5S H20 -8.294 3.434 0.058 ETKDGv3 46
B5S H21 -6.887 2.864 -1.994 ETKDGv3 47
B5S H22 -4.576 2.233 -1.745 ETKDGv3 48
B5S H25 -1.636 -2.266 1.561 ETKDGv3 49
B5S H25A -3.381 -1.983 1.290 ETKDGv3 50
B5S H26 -1.386 -2.680 -0.960 ETKDGv3 51
B5S H26A -3.154 -2.399 -1.144 ETKDGv3 52
B5S H27 -1.849 -4.613 0.580 ETKDGv3 53
B5S H27A -3.621 -4.340 0.386 ETKDGv3 54
B5S H32 0.268 -1.680 0.505 ETKDGv3 55
B5S H33 4.982 -1.787 -1.124 ETKDGv3 56
#